Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 195972909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195972909 nasal embryonic LHRH factor isoform a [Homo
sapiens]
(530 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens] 1080 0.0
gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens] 1072 0.0
gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens] 1023 0.0
gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens] 1019 0.0
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 40 0.007
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 37 0.045
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.13
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.13
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.13
gi|118150678 epithelial cell transforming sequence 2 oncogene-li... 35 0.13
gi|148727255 microtubule associated serine/threonine kinase fami... 35 0.17
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 35 0.22
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho... 34 0.29
gi|169194607 PREDICTED: hypothetical protein [Homo sapiens] 34 0.38
gi|169201944 PREDICTED: hypothetical protein [Homo sapiens] 34 0.38
gi|169192119 PREDICTED: hypothetical protein [Homo sapiens] 34 0.38
gi|150378549 tangerin [Homo sapiens] 34 0.38
gi|122937333 zinc finger protein 697 [Homo sapiens] 34 0.38
gi|55741655 anoctamin 8 [Homo sapiens] 33 0.49
gi|24308394 hypothetical protein LOC140893 [Homo sapiens] 33 0.49
gi|122937321 UNC homeobox [Homo sapiens] 33 0.65
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 33 0.65
gi|118918421 ets variant gene 4 (E1A enhancer binding protein, E... 32 1.1
gi|24307883 ets variant gene 4 (E1A enhancer binding protein, E1... 32 1.1
gi|91208420 bassoon protein [Homo sapiens] 32 1.1
gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens] 32 1.1
gi|157426860 transmembrane channel-like 5 isoform a [Homo sapiens] 32 1.1
gi|23097236 homeobox A9 [Homo sapiens] 32 1.4
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 32 1.4
gi|66529407 tensin [Homo sapiens] 32 1.4
>gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens]
Length = 530
Score = 1080 bits (2794), Expect = 0.0
Identities = 530/530 (100%), Positives = 530/530 (100%)
Query: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE
Sbjct: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
Query: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE
Sbjct: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
Query: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR
Sbjct: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
Query: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR 240
AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR
Sbjct: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR 240
Query: 241 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 300
GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD
Sbjct: 241 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 300
Query: 301 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 360
TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY
Sbjct: 301 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 360
Query: 361 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 420
IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL
Sbjct: 361 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 420
Query: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480
LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT
Sbjct: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480
Query: 481 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 530
LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL
Sbjct: 481 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 530
>gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens]
Length = 528
Score = 1072 bits (2773), Expect = 0.0
Identities = 528/530 (99%), Positives = 528/530 (99%), Gaps = 2/530 (0%)
Query: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE
Sbjct: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
Query: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE
Sbjct: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
Query: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR
Sbjct: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
Query: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR 240
AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQA VFR
Sbjct: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQA--VFR 238
Query: 241 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 300
GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD
Sbjct: 239 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 298
Query: 301 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 360
TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY
Sbjct: 299 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 358
Query: 361 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 420
IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL
Sbjct: 359 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 418
Query: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480
LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT
Sbjct: 419 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 478
Query: 481 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 530
LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL
Sbjct: 479 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 528
>gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens]
Length = 507
Score = 1023 bits (2646), Expect = 0.0
Identities = 507/530 (95%), Positives = 507/530 (95%), Gaps = 23/530 (4%)
Query: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE
Sbjct: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
Query: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE
Sbjct: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
Query: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR
Sbjct: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
Query: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR 240
AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAIS
Sbjct: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAIS--- 237
Query: 241 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 300
NFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD
Sbjct: 238 --------------------NFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 277
Query: 301 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 360
TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY
Sbjct: 278 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 337
Query: 361 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 420
IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL
Sbjct: 338 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 397
Query: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480
LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT
Sbjct: 398 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 457
Query: 481 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 530
LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL
Sbjct: 458 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 507
>gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens]
Length = 505
Score = 1019 bits (2636), Expect = 0.0
Identities = 505/530 (95%), Positives = 505/530 (95%), Gaps = 25/530 (4%)
Query: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE
Sbjct: 1 MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPE 60
Query: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE
Sbjct: 61 MQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIE 120
Query: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR
Sbjct: 121 LAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
Query: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFR 240
AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQA
Sbjct: 181 AFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQA----- 235
Query: 241 GYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 300
NFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD
Sbjct: 236 --------------------NFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKAD 275
Query: 301 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 360
TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY
Sbjct: 276 TSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAVACDTEGFVPPKVMLISSKVPKAEY 335
Query: 361 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 420
IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL
Sbjct: 336 IPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIWKMLIFCQGGPGHLYL 395
Query: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480
LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT
Sbjct: 396 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 455
Query: 481 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 530
LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL
Sbjct: 456 LMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLDFDDVL 505
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 39.7 bits (91), Expect = 0.007
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 127 RRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKEC-PGCAQLAPGPTPRAFGLD 185
R Q H HHH Q L+ +PG S P G G+ P + LAP +PR GL
Sbjct: 6 RSQHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPR-HGL- 63
Query: 186 QPPLPETSGRRKKLERMYSVDRV 208
LPE G R +R S D V
Sbjct: 64 --ALPEGDGSRDPPDRPRSPDPV 84
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 37.0 bits (84), Expect = 0.045
Identities = 64/234 (27%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 33 LSQSHPENRNGADHLLAD---AYSGHDGSPEMQ--------PAPQNKRRLSLVSNGCYEG 81
L+Q E R G + + H GSP ++ P PQ L ++ +
Sbjct: 695 LAQEESEERGGQREGEGEEKLSLEAHAGSPSLKTPDGPVPGPGPQGAAPEPLGASVQRDS 754
Query: 82 SLSEE-PSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLR 140
+ P + PA + P+ G P +P+P +A L V +G + P P
Sbjct: 755 AQGRPCPPPQAPANQ-PEGASSAAPGSP--VPAPPTKASALPVEQGPAEPIP-----PGV 806
Query: 141 ASPGGSREDVSRPCQSWAGSRQGSK-------ECPGCAQLAPGPTPRAFGLDQPP--LPE 191
AS GG R D P + G R K E PG PG TP DQ P +PE
Sbjct: 807 AS-GGLRPDALGPTTAHHGPRHPPKPPRSKATERPGQEPEGPGATPAGERDDQSPDSVPE 865
Query: 192 TSGRRKKLERMYSVDRV-SDDIPIRTWFPKENLFSFQTATTTMQAISVFRGYAE 244
R + +R + V + +P RT P S Q AT +Q F GY +
Sbjct: 866 ---RPRPADRRLCLPCVDASPLPGRTACP-----SLQEATRLIQEEFAFDGYLD 911
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/154 (25%), Positives = 51/154 (33%), Gaps = 15/154 (9%)
Query: 59 PEMQPAPQNKRRLSLVSNGCYEGSLSEEPS-----IRKPAGEGPQPRVYTISGEPALLPS 113
P +PAP R G L E + +R PA P+P G P LP+
Sbjct: 167 PPPRPAPPGTR----CCPGARAAQLLREAAAAAQGLRAPAARLPEP-TRRAPGRPGCLPT 221
Query: 114 PEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQL 173
A A + R P P R P E RP Q +G C++
Sbjct: 222 AAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGH-----CSRG 276
Query: 174 APGPTPRAFGLDQPPLPETSGRRKKLERMYSVDR 207
AP P P L +++ R R S R
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASR 310
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/154 (25%), Positives = 51/154 (33%), Gaps = 15/154 (9%)
Query: 59 PEMQPAPQNKRRLSLVSNGCYEGSLSEEPS-----IRKPAGEGPQPRVYTISGEPALLPS 113
P +PAP R G L E + +R PA P+P G P LP+
Sbjct: 167 PPPRPAPPGTR----CCPGARAAQLLREAAAAAQGLRAPAARLPEP-TRRAPGRPGCLPT 221
Query: 114 PEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQL 173
A A + R P P R P E RP Q +G C++
Sbjct: 222 AAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGH-----CSRG 276
Query: 174 APGPTPRAFGLDQPPLPETSGRRKKLERMYSVDR 207
AP P P L +++ R R S R
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASR 310
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/154 (25%), Positives = 51/154 (33%), Gaps = 15/154 (9%)
Query: 59 PEMQPAPQNKRRLSLVSNGCYEGSLSEEPS-----IRKPAGEGPQPRVYTISGEPALLPS 113
P +PAP R G L E + +R PA P+P G P LP+
Sbjct: 167 PPPRPAPPGTR----CCPGARAAQLLREAAAAAQGLRAPAARLPEP-TRRAPGRPGCLPT 221
Query: 114 PEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQL 173
A A + R P P R P E RP Q +G C++
Sbjct: 222 AAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGH-----CSRG 276
Query: 174 APGPTPRAFGLDQPPLPETSGRRKKLERMYSVDR 207
AP P P L +++ R R S R
Sbjct: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASR 310
>gi|118150678 epithelial cell transforming sequence 2 oncogene-like
[Homo sapiens]
Length = 904
Score = 35.4 bits (80), Expect = 0.13
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 346 PKVMLISSKVPKAEYIPTIIRRDDPSIIPILYDHEHATFEDILEEIERKLNVYHKGAKIW 405
P MLISS++P E + ++ ++ ++Y+H T E +L IE+ L+ G K
Sbjct: 288 PHFMLISSRIPAYEMVMESVK---AGVVSVVYEHS-VTLESLLYLIEKALD----GQKAQ 339
Query: 406 KMLIFCQGGPGHLYLLKNKVATFAKVEKEEDMIHFWKRL 444
+ IF G + LL+ + + E + FW++L
Sbjct: 340 SIGIFSDGDSREINLLQGYKIGVKNLLRPE-VRDFWEKL 377
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 35.0 bits (79), Expect = 0.17
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 24/129 (18%)
Query: 83 LSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQ-RHPHHHS----- 136
LS PS++K + P+ + + P+ +P P A +L+ R+ P H S
Sbjct: 1916 LSSFPSLQKDGAKEPERKEQPLQRHPSSIPPPPLTAKDLSSPAARQHCSSPSHASGREPG 1975
Query: 137 -QPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTP---------RAFGLDQ 186
+P A P S +D +P A + S P PGP P R+ +
Sbjct: 1976 AKPSTAEPSSSPQDPPKPV---AAHSESSSHKP-----RPGPDPGPPKTKHPDRSLSSQK 2027
Query: 187 PPLPETSGR 195
P + T G+
Sbjct: 2028 PSVGATKGK 2036
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 34.7 bits (78), Expect = 0.22
Identities = 50/234 (21%), Positives = 84/234 (35%), Gaps = 23/234 (9%)
Query: 84 SEEPSIRKPAGEGPQPRV-YTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRAS 142
S S +PA P P +T+ +P PSP A KGR +R P A
Sbjct: 469 SPSTSWHRPASPCPSPGPGHTLPPKP---PSPRGTT---ASPKGRVRRKEEAKESPSAAG 522
Query: 143 PGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQPPLPETSGRRKKLERM 202
P ED S+ + + ++ + AP PTP +QPP ET L
Sbjct: 523 P----EDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPP-AETPTDAAVL--- 574
Query: 203 YSVDRVSDDIPIRTWFPKENLFSFQTATTTMQAISVFRGYAERKRRKRENDSASVIQRNF 262
S P P + + + ++ R A +R + E + +R+
Sbjct: 575 -----TSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDK 629
Query: 263 R---KHLRMVGSRRVKAQTFAERRERSFSRSWSDPTPMKADTSHDSRDSSDLQS 313
R + L R + + A RRE +R + + + ++ ++ +S
Sbjct: 630 RMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARS 683
>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
sapiens]
Length = 502
Score = 34.3 bits (77), Expect = 0.29
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 82 SLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRA 141
SLS+ PS + P + E PSP E GRR+RH +S PL +
Sbjct: 376 SLSDVPSSSEARWRPSHPPFRSRCQERPRRPSPR----ESTQRHGRRRRH-RSYSPPLPS 430
Query: 142 --SPGGSREDVSRPCQSWAGSRQGS 164
S S ED R QSW R+GS
Sbjct: 431 GLSSWSSEEDKERQPQSWRAHRRGS 455
>gi|169194607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 33.9 bits (76), Expect = 0.38
Identities = 56/218 (25%), Positives = 77/218 (35%), Gaps = 53/218 (24%)
Query: 6 SRRRAL--RSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPEMQP 63
SRRRA R+ S+A R R G Q+H R + + + GH G
Sbjct: 231 SRRRATVTRARPSRSLAPPPRRRRRAG----QTH---RRARTEVAGNVHVGHPGREGAAG 283
Query: 64 APQNKRRLSLVSN-GC----YEGSLSEEP-SIRKPAGEGPQPRVYTI-----------SG 106
+ S GC + SL+ P +P+ P PR+ + G
Sbjct: 284 EGAGRDPESSADRRGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGTQMSRGVRGQG 343
Query: 107 EPALL----------PSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSR----EDVSR 152
P+LL PSP AEA+ A R P + +R PG R E +
Sbjct: 344 APSLLLQPVKPGTAAPSPRAEAVSAA-----RSDAPRPKGREIRGEPGDLRPRGAEGCTA 398
Query: 153 PCQSWAGSRQGSKECP--------GCAQLAPGPTPRAF 182
P + S CP + L+P P PRAF
Sbjct: 399 PAPTGLFREDASPSCPREVLGSWMRKSLLSPAPRPRAF 436
>gi|169201944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 33.9 bits (76), Expect = 0.38
Identities = 56/218 (25%), Positives = 77/218 (35%), Gaps = 53/218 (24%)
Query: 6 SRRRAL--RSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPEMQP 63
SRRRA R+ S+A R R G Q+H R + + + GH G
Sbjct: 231 SRRRATVTRARPSRSLAPPPRRRRRAG----QTH---RRARTEVAGNVHVGHPGREGAAG 283
Query: 64 APQNKRRLSLVSN-GC----YEGSLSEEP-SIRKPAGEGPQPRVYTI-----------SG 106
+ S GC + SL+ P +P+ P PR+ + G
Sbjct: 284 EGAGRDPESSADRRGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGTQMSRGVRGQG 343
Query: 107 EPALL----------PSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSR----EDVSR 152
P+LL PSP AEA+ A R P + +R PG R E +
Sbjct: 344 APSLLLQPVKPGTAAPSPRAEAVSAA-----RSDAPRPKGREIRGEPGDLRPRGAEGCTA 398
Query: 153 PCQSWAGSRQGSKECP--------GCAQLAPGPTPRAF 182
P + S CP + L+P P PRAF
Sbjct: 399 PAPTGLFREDASPSCPREVLGSWMRKSLLSPAPRPRAF 436
>gi|169192119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 33.9 bits (76), Expect = 0.38
Identities = 56/218 (25%), Positives = 77/218 (35%), Gaps = 53/218 (24%)
Query: 6 SRRRAL--RSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPEMQP 63
SRRRA R+ S+A R R G Q+H R + + + GH G
Sbjct: 231 SRRRATVTRARPSRSLAPPPRRRRRAG----QTH---RRARTEVAGNVHVGHPGREGAAG 283
Query: 64 APQNKRRLSLVSN-GC----YEGSLSEEP-SIRKPAGEGPQPRVYTI-----------SG 106
+ S GC + SL+ P +P+ P PR+ + G
Sbjct: 284 EGAGRDPESSADRRGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGTQMSRGVRGQG 343
Query: 107 EPALL----------PSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSR----EDVSR 152
P+LL PSP AEA+ A R P + +R PG R E +
Sbjct: 344 APSLLLQPVKPGTAAPSPRAEAVSAA-----RSDAPRPKGREIRGEPGDLRPRGAEGCTA 398
Query: 153 PCQSWAGSRQGSKECP--------GCAQLAPGPTPRAF 182
P + S CP + L+P P PRAF
Sbjct: 399 PAPTGLFREDASPSCPREVLGSWMRKSLLSPAPRPRAF 436
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 33.9 bits (76), Expect = 0.38
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 27/177 (15%)
Query: 19 VAAKVRAARAFGEYLSQSHPENRNGADHLLA--DAYSGHDGSPEMQPAPQNKRRLSLVSN 76
+A ++R A G + + +GA +A +A +G AP+ R + +
Sbjct: 1178 LAQRLRGHGAEGPQEPKEAADRADGAAPGVASRNAVAGRASKDGGAEAPRESRPAEVPAE 1237
Query: 77 GCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAI-----ELAVVKGRRQRH 131
G G+ + P G G + R +++GEP +P P A + ++K RR R
Sbjct: 1238 GLVNGAGA-------PGGGGVRLRRPSVNGEPGSVPPPRAHGSFSHVRDADLLKKRRSR- 1289
Query: 132 PHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQPP 188
LR S S +D P G+ + P + APGP P A QPP
Sbjct: 1290 -------LRNSSSFSMDD---PDAGAMGAAAAEGQAPDPSP-APGP-PTAADSQQPP 1334
>gi|122937333 zinc finger protein 697 [Homo sapiens]
Length = 545
Score = 33.9 bits (76), Expect = 0.38
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 35 QSHPENRN-GADHLLADAYSGHDGSPEMQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPA 93
+ PE R G++ + GH PEM PQ+ R V + C EG LSEE +
Sbjct: 31 EGDPEEREMGSNPHDTNKREGHP-EPEMGSNPQDSRHREAVPDICTEGQLSEEEGVSVRG 89
Query: 94 GEGPQPRVYTISGEPALLPS 113
E Q V ++ P L S
Sbjct: 90 EEDDQSGVADMAMFPGLSES 109
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 33.5 bits (75), Expect = 0.49
Identities = 41/160 (25%), Positives = 57/160 (35%), Gaps = 41/160 (25%)
Query: 53 SGHDGSPEMQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLP 112
+G P+ P+ + R + +G + +L+EE +P EG + + G PAL
Sbjct: 1069 AGGQARPDGTPSSGSSR---VQRSGPVDEALAEELEAPRPEEEGSGTALAPV-GAPAL-- 1122
Query: 113 SPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGS----------RQ 162
+ RR R P P P C W G RQ
Sbjct: 1123 ------------RTRRSRSP----APPPPMPLPRPPTPPAGCWQWDGPWGCGGEGAAPRQ 1166
Query: 163 G--SKECPGCAQLAPGPTPRA-------FGLDQPPLPETS 193
+ ECP CA P P P+ + L PPLP TS
Sbjct: 1167 ALAAAECPPCAMAGPPPAPQPLPGDASFYSLPPPPLPPTS 1206
>gi|24308394 hypothetical protein LOC140893 [Homo sapiens]
Length = 664
Score = 33.5 bits (75), Expect = 0.49
Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 35/160 (21%)
Query: 66 QNKRRLSLVSN---GCYEGS--LSEEPSIRKPAGEGPQPRVYTISGEPA---LLPSP--- 114
QN +R+ +++N G E + L EE + G+ P+PR + +P LLPSP
Sbjct: 96 QNLQRIFILTNEMNGLKEENETLKEEVKRLRVLGDRPKPRAKEGTSDPPSPLLLPSPGGW 155
Query: 115 ------------EAEAIELAV-VKGRRQRHPHHHSQPLRASPGGSREDVSRPCQS----- 156
EAE V ++G + H S + SPG + + P S
Sbjct: 156 KAITEKPPGGHEEAEEDHQGVGLRGEEKPAGHRTSPVAKISPGATLPESRAPDMSPQRIS 215
Query: 157 ------WAGSRQGSKECPGCAQLAPGPTPRAFGLDQPPLP 190
A R GS+ CP A G P PP P
Sbjct: 216 NQLHGTIAVVRPGSQACPADRGPANGTPPPLPARSSPPSP 255
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 33.1 bits (74), Expect = 0.65
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 20/180 (11%)
Query: 15 AMSSVAAKVRAARAFG-EYLSQSHPENRNGADHLLADAYSGHDGSPEMQPAPQNKRRLSL 73
A+ AA + A F E L P R A + A A +G D +P + AP+ +L
Sbjct: 318 AVERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAAAAAGLDFAPGLPCAPR-----TL 372
Query: 74 VSNGCYE--------GSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAI--ELAV 123
+ G + G L + +++ AG P P+ PA+ P+P A+A +
Sbjct: 373 IGKGHFLLYPITQPLGFLVPQAALKGGAGLEPAPK--DAPPAPAVPPAPPAQASFGAFSG 430
Query: 124 VKGRRQRHPHHHSQPLRASPGGSREDVS--RPCQSWAGSRQGSKECPGCAQLAPGPTPRA 181
G S ASPG + R S A + G +C P P P A
Sbjct: 431 PGGAPDSAFARRSPDAVASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPA 490
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 33.1 bits (74), Expect = 0.65
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 237 SVFRGYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTFAERRERSFSRSWSDPTP 296
S FR Y E+KR ++ +A +IQ+++R + R G + T R + SF D
Sbjct: 1110 SKFRSYYEQKRFQQSRRAAVLIQQHYRSYRRRPGPPHRTSATLPARNKGSFLTKKQDQAA 1169
Query: 297 MK 298
K
Sbjct: 1170 RK 1171
>gi|118918421 ets variant gene 4 (E1A enhancer binding protein,
E1AF) [Homo sapiens]
Length = 484
Score = 32.3 bits (72), Expect = 1.1
Identities = 45/155 (29%), Positives = 55/155 (35%), Gaps = 29/155 (18%)
Query: 31 EYLSQSHPENRNGADHLLADAYSGHDGSPEMQPAPQNKRRLSLV---SNGCYEGSLSEEP 87
+++ H EN A H SP PA R+ L C S + P
Sbjct: 76 QFVPDFHSENL--AFHSPTTRIKKEPQSPRTDPALSCSRKPPLPYHHGEQCLYSSAYDPP 133
Query: 88 SIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHH-----HS----QP 138
R+ A + P P G+ L P P AE G Q HP H HS QP
Sbjct: 134 --RQIAIKSPAPGAL---GQSPLQPFPRAEQRNFLRSSGTSQPHPGHGYLGEHSSVFQQP 188
Query: 139 LR-----ASPGGSREDVSRPCQSWAGSRQGSKECP 168
L S GG RE + P Q Q S+ CP
Sbjct: 189 LDICHSFTSQGGGREPLPAPYQ-----HQLSEPCP 218
>gi|24307883 ets variant gene 4 (E1A enhancer binding protein, E1AF)
[Homo sapiens]
Length = 484
Score = 32.3 bits (72), Expect = 1.1
Identities = 45/155 (29%), Positives = 55/155 (35%), Gaps = 29/155 (18%)
Query: 31 EYLSQSHPENRNGADHLLADAYSGHDGSPEMQPAPQNKRRLSLV---SNGCYEGSLSEEP 87
+++ H EN A H SP PA R+ L C S + P
Sbjct: 76 QFVPDFHSENL--AFHSPTTRIKKEPQSPRTDPALSCSRKPPLPYHHGEQCLYSSAYDPP 133
Query: 88 SIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHH-----HS----QP 138
R+ A + P P G+ L P P AE G Q HP H HS QP
Sbjct: 134 --RQIAIKSPAPGAL---GQSPLQPFPRAEQRNFLRSSGTSQPHPGHGYLGEHSSVFQQP 188
Query: 139 LR-----ASPGGSREDVSRPCQSWAGSRQGSKECP 168
L S GG RE + P Q Q S+ CP
Sbjct: 189 LDICHSFTSQGGGREPLPAPYQ-----HQLSEPCP 218
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 32.3 bits (72), Expect = 1.1
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 64 APQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGP-QPRVYTISGEPALLP----SPEAEA 118
A + + L L S+ S S+E I P +GP P ++ PA LP +P + A
Sbjct: 1347 AKETQDPLKLHSSPASPSSASKE--IGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPA 1404
Query: 119 IELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPT 178
H + HS P A+ G ED+ + A + + ++E P A G T
Sbjct: 1405 GSERSPSPSSTAHSYGHS-PTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGT 1463
Query: 179 PRA------FGLDQPPLPETS 193
P+ F PPL +S
Sbjct: 1464 PQPSRAYSYFASSSPPLSPSS 1484
>gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens]
Length = 948
Score = 32.3 bits (72), Expect = 1.1
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 39/192 (20%)
Query: 31 EYLSQSHPENRNGADHLLADAYSGHDG---SPEMQPAPQNKRRLSLVSNGCYEGSLSEEP 87
+Y S +NR +L Y G +P+ N ++ + Y GSL+E
Sbjct: 15 DYPDYSGSQNRTQG-YLKTQGYPDVPGPLNNPDYPGTRSNPYSVASRTRPDYPGSLAEPN 73
Query: 88 ---SIRKPAGEGPQPRVYTISGE-----PALLPSPEAEAIELAVVKGRRQRHPHHHSQPL 139
S+ P G + Y+ + P LP P+ Q HP+H +
Sbjct: 74 YPRSLSNPDYSGTRSNAYSAASRTSPDHPTSLPEPDYSEF---------QSHPYHRASSR 124
Query: 140 RASPGGSREDVSRPCQSWAGSRQGSK-----------ECPGCAQLAPGPTPRAFGLDQPP 188
+ GS+ + S +G+ GS+ + PG + P PRA L+ P
Sbjct: 125 QPDYPGSQRNPDFAGSSSSGNYAGSRTHPDHFGSLEPDYPGAQSNSDHPGPRA-NLNHP- 182
Query: 189 LPETSGRRKKLE 200
G RK LE
Sbjct: 183 -----GSRKNLE 189
>gi|157426860 transmembrane channel-like 5 isoform a [Homo sapiens]
Length = 1006
Score = 32.3 bits (72), Expect = 1.1
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 39/192 (20%)
Query: 31 EYLSQSHPENRNGADHLLADAYSGHDG---SPEMQPAPQNKRRLSLVSNGCYEGSLSEEP 87
+Y S +NR +L Y G +P+ N ++ + Y GSL+E
Sbjct: 15 DYPDYSGSQNRTQG-YLKTQGYPDVPGPLNNPDYPGTRSNPYSVASRTRPDYPGSLAEPN 73
Query: 88 ---SIRKPAGEGPQPRVYTISGE-----PALLPSPEAEAIELAVVKGRRQRHPHHHSQPL 139
S+ P G + Y+ + P LP P+ Q HP+H +
Sbjct: 74 YPRSLSNPDYSGTRSNAYSAASRTSPDHPTSLPEPDYSEF---------QSHPYHRASSR 124
Query: 140 RASPGGSREDVSRPCQSWAGSRQGSK-----------ECPGCAQLAPGPTPRAFGLDQPP 188
+ GS+ + S +G+ GS+ + PG + P PRA L+ P
Sbjct: 125 QPDYPGSQRNPDFAGSSSSGNYAGSRTHPDHFGSLEPDYPGAQSNSDHPGPRA-NLNHP- 182
Query: 189 LPETSGRRKKLE 200
G RK LE
Sbjct: 183 -----GSRKNLE 189
>gi|23097236 homeobox A9 [Homo sapiens]
Length = 272
Score = 32.0 bits (71), Expect = 1.4
Identities = 41/168 (24%), Positives = 57/168 (33%), Gaps = 32/168 (19%)
Query: 28 AFGEYLSQSHPENRNGADHLLADAYS-GHDGSPEMQPAPQNKRRLSLVSNGCYEGSLSEE 86
A G Y S + AD L Y+ G G P Q A +L+E
Sbjct: 6 ALGNYYVDSFLLGADAADELSVGRYAPGTLGQPPRQAA-----------------TLAEH 48
Query: 87 PSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGS 146
P P + V+ S P + + A A+ AV H HHH +P +
Sbjct: 49 PDF-SPCSFQSKATVFGASWNP--VHAAGANAVPAAVY-----HHHHHHPYVHPQAPVAA 100
Query: 147 REDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPRAFGLDQPPLPETSG 194
R +SW + PG A P+ R +G+ PL G
Sbjct: 101 AAPDGRYMRSWL------EPTPGALSFAGLPSSRPYGIKPEPLSARRG 142
>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
sapiens]
Length = 909
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 77 GCYEGSLSEEPSIRKPAGEGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHS 136
G EG + P+ R +G Q P PS EA+E R Q +
Sbjct: 713 GIQEGGVRGPPTSRPARAQGAQE-------SPLPAPSEPPEAVE-GKASPREQGEEGAPT 764
Query: 137 QPLRASPGGSREDVSRPCQSWAGSRQGSKECPGCAQLAPGPTPR 180
QP GG + ++ + +G G G +L P P PR
Sbjct: 765 QPCCGLAGGPQAGPTQQPAARSGHPNGEIGQEGLGKLVPSPAPR 808
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 32.0 bits (71), Expect = 1.4
Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 15/102 (14%)
Query: 35 QSHPENRNGADHLLADAYSGHDGSPEMQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAG 94
+ P N G + P PAP +R S+G YE E S R P
Sbjct: 862 EEEPLNLEGLVAHRVAGVQAREKQPAEPPAPLRRRA---ASDGQYENQSPEATSPRSPGV 918
Query: 95 EGPQPRVYTISGEPALLPSPEAEAIELAVVKGRRQRHPHHHS 136
P V SPE A+ +A+ G R + PH HS
Sbjct: 919 RSPVQCV-----------SPEL-ALTIALNPGGRPKEPHLHS 948
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,072
Number of Sequences: 37866
Number of extensions: 1216588
Number of successful extensions: 4342
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 4261
Number of HSP's gapped (non-prelim): 187
length of query: 530
length of database: 18,247,518
effective HSP length: 107
effective length of query: 423
effective length of database: 14,195,856
effective search space: 6004847088
effective search space used: 6004847088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.