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Search of human proteins with 195972801
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo
sapiens]
(497 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 1001 0.0
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 936 0.0
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 833 0.0
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 825 0.0
gi|19923215 myocyte enhancer factor 2C isoform 1 [Homo sapiens] 521 e-148
gi|196114945 myocyte enhancer factor 2C isoform 2 [Homo sapiens] 511 e-145
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 496 e-140
gi|239747524 PREDICTED: similar to serum response factor-related... 317 2e-86
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 181 1e-45
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 180 3e-45
gi|4507205 serum response factor (c-fos serum response element-b... 69 1e-11
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 57 5e-08
gi|55750053 atrophin-1 [Homo sapiens] 56 7e-08
gi|55750041 atrophin-1 [Homo sapiens] 56 7e-08
gi|5032187 transducer of ERBB2, 1 [Homo sapiens] 55 2e-07
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 54 3e-07
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 54 3e-07
gi|33286444 mastermind-like 2 [Homo sapiens] 54 4e-07
gi|169636435 caudal type homeobox 2 [Homo sapiens] 52 1e-06
gi|90903231 huntingtin [Homo sapiens] 52 1e-06
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 52 1e-06
gi|56549696 E1A binding protein p400 [Homo sapiens] 50 4e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 50 4e-06
gi|38158015 mastermind-like 3 [Homo sapiens] 50 5e-06
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|110347429 mediator complex subunit 12 [Homo sapiens] 50 6e-06
gi|50345997 E1A binding protein p300 [Homo sapiens] 49 8e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 49 8e-06
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 1001 bits (2589), Expect = 0.0
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120
Query: 121 DSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP 180
DSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP
Sbjct: 121 DSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP 180
Query: 181 PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT 240
PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT
Sbjct: 181 PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT 240
Query: 241 GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPL 300
GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPL
Sbjct: 241 GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPL 300
Query: 301 ATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQH 360
ATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQH
Sbjct: 301 ATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQH 360
Query: 361 HLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQ 420
HLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQ
Sbjct: 361 HLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQ 420
Query: 421 PPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTE 480
PPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTE
Sbjct: 421 PPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTE 480
Query: 481 DRESPSVKRMRMDAWVT 497
DRESPSVKRMRMDAWVT
Sbjct: 481 DRESPSVKRMRMDAWVT 497
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 936 bits (2419), Expect = 0.0
Identities = 468/499 (93%), Positives = 479/499 (95%), Gaps = 2/499 (0%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120
DMDKVLLKYTEYNEPHESRTNSDIVE L KK GC+SPD D + +P +E+++ K+NE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
Query: 121 DSDFIFKRGP--PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 178
+ D + + PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML
Sbjct: 121 EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 180
Query: 179 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 238
SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG
Sbjct: 181 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 240
Query: 239 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 298
ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ
Sbjct: 241 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 300
Query: 299 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 358
PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ
Sbjct: 301 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 360
Query: 359 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 418
QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ
Sbjct: 361 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 420
Query: 419 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 478
QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN
Sbjct: 421 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 480
Query: 479 TEDRESPSVKRMRMDAWVT 497
TEDRESPSVKRMRMDAWVT
Sbjct: 481 TEDRESPSVKRMRMDAWVT 499
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 833 bits (2151), Expect = 0.0
Identities = 411/412 (99%), Positives = 412/412 (100%)
Query: 86 ETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP 145
+TLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP
Sbjct: 18 QTLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP 77
Query: 146 VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG 205
VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG
Sbjct: 78 VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG 137
Query: 206 MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 265
MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN
Sbjct: 138 MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 197
Query: 266 SRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTA 325
SRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTA
Sbjct: 198 SRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTA 257
Query: 326 YNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSIN 385
YNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSIN
Sbjct: 258 YNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSIN 317
Query: 386 TNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPV 445
TNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPV
Sbjct: 318 TNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPV 377
Query: 446 DSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 497
DSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT
Sbjct: 378 DSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 429
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 825 bits (2132), Expect = 0.0
Identities = 411/420 (97%), Positives = 412/420 (98%), Gaps = 8/420 (1%)
Query: 86 ETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP 145
+TLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP
Sbjct: 18 QTLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVP 77
Query: 146 VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG 205
VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG
Sbjct: 78 VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGG 137
Query: 206 MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 265
MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN
Sbjct: 138 MLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 197
Query: 266 SRKPDLRVVIPPSSKGMMPPL--------NTQRISSSQATQPLATPVVSVTTPSLPPQGL 317
SRKPDLRVVIPPSSKGMMPPL NTQRISSSQATQPLATPVVSVTTPSLPPQGL
Sbjct: 198 SRKPDLRVVIPPSSKGMMPPLSEEEELELNTQRISSSQATQPLATPVVSVTTPSLPPQGL 257
Query: 318 VYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLS 377
VYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLS
Sbjct: 258 VYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLS 317
Query: 378 QGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPR 437
QGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPR
Sbjct: 318 QGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPR 377
Query: 438 QEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 497
QEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT
Sbjct: 378 QEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 437
>gi|19923215 myocyte enhancer factor 2C isoform 1 [Homo sapiens]
Length = 473
Score = 521 bits (1343), Expect = e-148
Identities = 308/516 (59%), Positives = 360/516 (69%), Gaps = 62/516 (12%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+NKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCES--PDADDYFEHSPLSEDRFSKL 118
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGC+S PDADD HSP SED++ K+
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI 120
Query: 119 NEDSDFIFKRGP-PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSM 177
NED D + R +PP NF M V++PV+S N+L Y+NP SSL +P+L
Sbjct: 121 NEDIDLMISRQRLCAVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNL----------- 169
Query: 178 LSPPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNL 236
L +L RN +SPG RPPS GN GG++ DLT +GAG+S GNG+ N R SP L
Sbjct: 170 LPLAHPSLQRNSMSPGVTHRPPSAGNTGGLMG-GDLT--SGAGTS-AGNGYGNPRNSPGL 225
Query: 237 IGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLN-------TQ 289
+ + G +L K M KSPPP NLGMN+RKPDLRV+IPP SK MP ++ Q
Sbjct: 226 LVSPG--NLNKNMQAKSPPPM---NLGMNNRKPDLRVLIPPGSKNTMPSVSEDVDLLLNQ 280
Query: 290 RISSSQATQPLATPVVSVTTPSLPPQGL--VYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
RI++SQ+ Q LATPVVSV TP+LP QG+ SA+ T Y T+YSL+SADLS+L GFN+
Sbjct: 281 RINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGFNTAS 340
Query: 348 MLSLGQVSAWQQHHLGQ---AALSSLVA--GGQLSQGSNLSINTNQNISIKSEPISPPRD 402
L LG V+ WQQ HL +ALS L A LSQ SNLS+ + Q+++IKSEP+SPPRD
Sbjct: 341 ALHLGSVTGWQQQHLHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRD 400
Query: 403 RMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDRED 462
R T P PQ R E GRSPVDSLSS SSSYDGSDRED
Sbjct: 401 RTT------------------TPSRYPQ----HTRHEAGRSPVDSLSSCSSSYDGSDRED 438
Query: 463 PRGDFHSPIVLGRPPNTEDRESPSVKRMRM-DAWVT 497
R +FHSPI L R P+ ++RESPSVKRMR+ + W T
Sbjct: 439 HRNEFHSPIGLTR-PSPDERESPSVKRMRLSEGWAT 473
>gi|196114945 myocyte enhancer factor 2C isoform 2 [Homo sapiens]
Length = 463
Score = 511 bits (1317), Expect = e-145
Identities = 299/507 (58%), Positives = 354/507 (69%), Gaps = 54/507 (10%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+NKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120
DMDKVLLKYTEYNEPHESRTNSDIVE L KK GCESPD D + +P +E+++ K+NE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINE 120
Query: 121 DSDFIFKRGP-PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLS 179
+ D + K P +PP NF M V++PV+S N+L Y+NP SSL +P+L L
Sbjct: 121 EFDNMIKSHKIPAVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNL-----------LP 169
Query: 180 PPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 238
+L RN +SPG RPPS GN GG++ DLT +GAG+S GNG+ N R SP L+
Sbjct: 170 LAHPSLQRNSMSPGVTHRPPSAGNTGGLMG-GDLT--SGAGTS-AGNGYGNPRNSPGLLV 225
Query: 239 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 298
+ G +L K M KSPPP NLGMN+RKPDLRV+IPP SK MP +N QRI++SQ+ Q
Sbjct: 226 SPG--NLNKNMQAKSPPPM---NLGMNNRKPDLRVLIPPGSKNTMPSVN-QRINNSQSAQ 279
Query: 299 PLATPVVSVTTPSLPPQGL--VYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSA 356
LATPVVSV TP+LP QG+ SA+ T Y T+YSL+SADLS+L GFN+ L LG V+
Sbjct: 280 SLATPVVSVATPTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGFNTASALHLGSVTG 339
Query: 357 WQQHHLGQ---AALSSLVA--GGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQ 411
WQQ HL +ALS L A LSQ SNLS+ + Q+++IKSEP+SPPRDR T
Sbjct: 340 WQQQHLHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRDRTT------ 393
Query: 412 QQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPI 471
P PQ R E GRSPVDSLSS SSSYDGSDRED R +FHSPI
Sbjct: 394 ------------TPSRYPQ----HTRHEAGRSPVDSLSSCSSSYDGSDREDHRNEFHSPI 437
Query: 472 VLGRPPNTEDRESPSVKRMRM-DAWVT 497
L R P+ ++RESPSVKRMR+ + W T
Sbjct: 438 GLTR-PSPDERESPSVKRMRLSEGWAT 463
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 496 bits (1277), Expect = e-140
Identities = 291/547 (53%), Positives = 347/547 (63%), Gaps = 81/547 (14%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI RI DERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN SNKLFQYAST
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCES--PDADDYFEHSPLSEDRFSKL 118
DMDKVLLKYTEYNEPHESRTN+DI+ETLRKKG NGC+S PD +D E SPL ED++ +
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRA 120
Query: 119 NEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 178
+E+ D +F+R +P NF+M VTVPV++ ++L ++NP SLV+PSL SS LTD +L
Sbjct: 121 SEELDGLFRRYGSTVPAPNFAMPVTVPVSNQSSLQFSNPSGSLVTPSLVTSS-LTDPRLL 179
Query: 179 SPPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLI 237
SP Q L RN VSPG PQRP S AG ML DL NGA SPVGNG+V++RASP L+
Sbjct: 180 SPQQPALQRNSVSPGLPQRPAS---AGAMLG-GDLNSANGACPSPVGNGYVSARASPGLL 235
Query: 238 GATGANSLGKVMPTKSPPPP-GGGNLGMNSRKPDLRVVIPPSSKGMMPPL--------NT 288
NSL KV+P KSPPPP LG SRKPDLRV+ + KG+M L N
Sbjct: 236 PVANGNSLNKVIPAKSPPPPTHSTQLGAPSRKPDLRVITSQAGKGLMHHLTEDHLDLNNA 295
Query: 289 QRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGM 348
QR+ SQ+T L TPVVSV TPSL QGL +S+MPTAYNTDY LTSA+LS+L F+SPG
Sbjct: 296 QRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTSAELSSLPAFSSPGG 355
Query: 349 LSLGQVSAW--------------------------------------QQHHLGQAALSSL 370
LSLG V+AW QQ HL +LS+L
Sbjct: 356 LSLGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVSLSNL 415
Query: 371 VAGGQLSQ-GSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQP 429
+ G L G+ L++ T+ +ISIKSEP+SP R+R P PPP
Sbjct: 416 IPGSPLPHVGAALTVTTHPHISIKSEPVSPSRER----------------SPAPPPPAVF 459
Query: 430 QPPQPQPRQEMGRSPVDSLSS-SSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVK 488
+P+P D LSS + SY+ DR+D RGDF + L RP + E +VK
Sbjct: 460 PAARPEPG--------DGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEAEGSAVK 511
Query: 489 RMRMDAW 495
RMR+D W
Sbjct: 512 RMRLDTW 518
>gi|239747524 PREDICTED: similar to serum response factor-related
protein C4 [Homo sapiens]
Length = 434
Score = 317 bits (811), Expect = 2e-86
Identities = 161/205 (78%), Positives = 172/205 (83%), Gaps = 2/205 (0%)
Query: 84 IVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRG--PPGLPPQNFSMS 141
IVE L KK GC+S D D +P +E+++ K+NE+ D + + PGLPPQNFSMS
Sbjct: 202 IVEALNKKEHRGCDSSDPDTSCVLTPYTEEKYKKINEEFDNMMQNHNIAPGLPPQNFSMS 261
Query: 142 VTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTG 201
VTVPV SPNALSYTNPGSSLVSPSLAASSTLTD + LSPPQT LHRNVSPGAPQRPPSTG
Sbjct: 262 VTVPVKSPNALSYTNPGSSLVSPSLAASSTLTDLNTLSPPQTILHRNVSPGAPQRPPSTG 321
Query: 202 NAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGN 261
NAGGML TTDLTVPNG GSSPVGN FVNSRASPNLIGATGANSLGKVMPTKSPPPPGG N
Sbjct: 322 NAGGMLGTTDLTVPNGTGSSPVGNEFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGSN 381
Query: 262 LGMNSRKPDLRVVIPPSSKGMMPPL 286
LGMNS KPDLRVVIP SSKGM PPL
Sbjct: 382 LGMNSGKPDLRVVIPASSKGMTPPL 406
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 181 bits (460), Expect = 1e-45
Identities = 123/293 (41%), Positives = 161/293 (54%), Gaps = 29/293 (9%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI+RI+D+RNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+N+LFQYAST
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL- 118
DMD+VLLKYTEY+EPHESRTN+DI+ETL+++G+ G + P+ + D P ++F +L
Sbjct: 61 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA 117
Query: 119 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL 172
E D R P +P P ++ P P+ L P S SP A+
Sbjct: 118 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA 177
Query: 173 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRA 232
++ P + H P P+ G + P G + P G G SR+
Sbjct: 178 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDL--------PGGL-AGPRG-GLNTSRS 227
Query: 233 SPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPP 285
+ L T +P PP G + P+ + PP G++ P
Sbjct: 228 L--------YSGLQNPCSTATPGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQP 272
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 180 bits (456), Expect = 3e-45
Identities = 130/323 (40%), Positives = 173/323 (53%), Gaps = 30/323 (9%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI+RI+D+RNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+N+LFQYAST
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDAD-DYFEHSPLSEDRFSKL- 118
DMD+VLLKYTEY+EPHESRTN+DI+ETL+++G+ G + P+ + D P ++F +L
Sbjct: 61 DMDRVLLKYTEYSEPHESRTNTDILETLKRRGI-GLDGPELEPDEGPEEP--GEKFRRLA 117
Query: 119 NEDSDFIFKR-----GPPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL 172
E D R P +P P ++ P P+ L P S SP A+
Sbjct: 118 GEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKA 177
Query: 173 TDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGA--GSSPVGNGFVNS 230
++ P + H P P+ G + L P G S + +G N
Sbjct: 178 GPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDL--PGGLAGPRGGLNTSRSLYSGLQNP 235
Query: 231 RASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQR 290
++ AT LG P PGG +G + R V P++ PP +
Sbjct: 236 CST-----ATPGPPLGSF-----PFLPGGPPVGAEAW---ARRVPQPAAPPRRPPQSASS 282
Query: 291 ISSSQATQPLATPVVSVTTPSLP 313
+S+S +P P + +P
Sbjct: 283 LSAS--LRPPGAPATFLRPSPIP 303
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 68.9 bits (167), Expect = 1e-11
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 64/348 (18%)
Query: 2 GRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTD 61
GR KI++ I ++ R TF+KRK G+MKKAYELS L ++ L++ + + ++ +A+
Sbjct: 142 GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRK 201
Query: 62 MDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLN-E 120
+ ++ S T +++T LN +SP D P ++ R S E
Sbjct: 202 LQPMI----------TSETGKALIQTC----LNSPDSPPRSD-----PTTDQRMSATGFE 242
Query: 121 DSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTN-PG-SSLVSPSLAASSTLTDSSML 178
++D ++ ++ S T P A + TN PG +S + + + S+T+ SS
Sbjct: 243 ETDLTYQ------VSESDSSGETKDTLKP-AFTVTNLPGTTSTIQTAPSTSTTMQVSSGP 295
Query: 179 SPPQTT----LHRNVSPGAPQRP-----PSTG----NAGGM--LSTTDLTVPNGAGSSPV 223
S P T + +VSP A STG ++GG+ L T+ +P GA + V
Sbjct: 296 SFPITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQV 355
Query: 224 GNGFVN-----SRASPNLIGAT--------GANSLGKVMPTKSPPPPGGGNLGMNSRKPD 270
+ +ASP+ +T G +L + T S P GG++ S
Sbjct: 356 PVQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAV 415
Query: 271 LRVVIPPSSKGMMPPLN-------TQRISSSQATQPLATPVVSVTTPS 311
+ G + LN T ++S SQ +P P V +T S
Sbjct: 416 MYAPTSGLGDGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVFLTASS 463
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 56.6 bits (135), Expect = 5e-08
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 34/204 (16%)
Query: 132 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 179
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 3945 GTPPSLITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 4004
Query: 180 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPN-GAGSSPVGNGFVNSR 231
PP TT R++SP +P R T G L TT +T P+ G +P
Sbjct: 4005 PPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQH 4064
Query: 232 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 291
++P L ++ T+SPP PG G + PS R
Sbjct: 4065 STPALSSPHPSS-----RTTESPPSPGTTTPGHTTATSRTTATATPSK---------TRT 4110
Query: 292 SSSQATQPLATPVVSVTTPSLPPQ 315
S+ + P + P+ +V T PQ
Sbjct: 4111 STLLPSSPTSAPITTVVTTGCEPQ 4134
Score = 54.7 bits (130), Expect = 2e-07
Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 132 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 179
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 2688 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 2747
Query: 180 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPN-GAGSSPVGNGFVNSR 231
PP TT R++SP +P R T G L TT +T P+ G +P
Sbjct: 2748 PPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQH 2807
Query: 232 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 291
++P L ++ T+SPP PG G PS R
Sbjct: 2808 STPALSSPHPSS-----RTTESPPSPGTTTPGHTRATSRTTATATPSK---------TRT 2853
Query: 292 SSSQATQPLATPVVSVTTPSLPPQ 315
S+ + P + P+ +V T PQ
Sbjct: 2854 STLLPSSPTSAPITTVVTMGCEPQ 2877
Score = 52.0 bits (123), Expect = 1e-06
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 132 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 179
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 3388 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 3447
Query: 180 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPNGAGS-SPVGNGFVNSR 231
PP TT R++ P +P R T G+L TT +T P+ S +P
Sbjct: 3448 PPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQH 3507
Query: 232 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 291
++P L ++ T+SPP PG G PS R
Sbjct: 3508 STPALSSPHPSS-----RTTESPPSPGTTTPGHTRGTSRTTATATPSK---------TRT 3553
Query: 292 SSSQATQPLATPVVSVTTPSLPPQ 315
S+ + P + P+ +V T PQ
Sbjct: 3554 STLLPSSPTSAPITTVVTTGCEPQ 3577
Score = 50.4 bits (119), Expect = 4e-06
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 132 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 179
G PP + + T+ T + PG++ + P L A S+T+T SS L +
Sbjct: 2131 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSSALGTTHT 2190
Query: 180 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRA 232
PP TT R++ P +P R T G+L TT +T P+ S + ++
Sbjct: 2191 PPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQH 2250
Query: 233 SPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRIS 292
S + + +S T+SPP PG G + PS R S
Sbjct: 2251 STPALSSPHPSS----RTTESPPSPGTTTPGHTTATSRTTATATPSK---------TRTS 2297
Query: 293 SSQATQPLATPVVSVTTPSLPPQ 315
+ + P + P+ +V T PQ
Sbjct: 2298 TLLPSSPTSAPITTVVTMGCEPQ 2320
Score = 40.8 bits (94), Expect = 0.003
Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 49/226 (21%)
Query: 137 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 196
N+ + P TS A+ + PG++ + L ++T T+S+ G+
Sbjct: 2413 NYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTEST---------------GSTAT 2457
Query: 197 PPSTGNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 252
P ST +L +T +TVP G+ ++ + T + K P
Sbjct: 2458 PSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS 2517
Query: 253 SPPPPGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLA 301
SP G + P LR IP SS L T SQ T P A
Sbjct: 2518 SP--------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTA 2563
Query: 302 TPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
T +S TPS P+ + S T T + T A S ++PG
Sbjct: 2564 T--MSTATPSSTPETVHTS---TVLTTTATTTGATGSVATPSSTPG 2604
Score = 39.3 bits (90), Expect = 0.008
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 26/230 (11%)
Query: 134 PPQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP-PQTTLHRNVSP 191
PP+ + + T P VTS A ++PG++ P+L +++T ++ ++P P ++L +
Sbjct: 1938 PPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWT- 1996
Query: 192 GAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPT 251
+ +T M + T + P A +S V + + + AT +++ G T
Sbjct: 1997 ---RLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSV-ATPSSTPGTAHTT 2052
Query: 252 KSPPPPGGGNLGMNSRKPDLRVVIP--------PSSKGMMPPLNTQRISSSQATQPLATP 303
K P G S P + P P+++G +T SS T AT
Sbjct: 2053 KVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRG-----STVTPSSIPGTTHTATV 2107
Query: 304 VVSVTTP------SLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
+ + TT + P S P + T + +A S ++PG
Sbjct: 2108 LTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPG 2157
Score = 39.3 bits (90), Expect = 0.008
Identities = 50/207 (24%), Positives = 75/207 (36%), Gaps = 17/207 (8%)
Query: 135 PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLH 186
P + + T VTS A +++PG++ P+L A S T SS L T L
Sbjct: 3754 PHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLS 3813
Query: 187 RNVSPGA------PQRPPSTGNAGGMLSTTDLTV-PNGAGSSPVGNGFVNSRASPNLIGA 239
+ +P A P P T + +L+TT T G+ ++P
Sbjct: 3814 QTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTT 3873
Query: 240 TGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMM-PPLNTQRISSSQATQ 298
TG P + PP + + V P S G P +++ AT
Sbjct: 3874 TGFTVTPSSSPGTARTPPVWIST-TTTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTVATG 3932
Query: 299 PLATPVVSVTTPSLPPQGLVYSAMPTA 325
+ATP S T PP + + TA
Sbjct: 3933 SMATPSSSTQTSGTPPSLITTATTITA 3959
Score = 38.5 bits (88), Expect = 0.014
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 49/226 (21%)
Query: 137 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 196
N+ + P TS A + PG++ + L ++T T+S+ G+
Sbjct: 3670 NYGHCPSTPATSSTATPSSTPGTTWILTKLTTTATTTEST---------------GSTAT 3714
Query: 197 PPSTGNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 252
P ST +L +T +TVP G+ ++ + T + K P
Sbjct: 3715 PSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS 3774
Query: 253 SPPPPGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLA 301
SP G + P LR IP SS L T SQ T P A
Sbjct: 3775 SP--------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTA 3820
Query: 302 TPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
T +S TPS P+ S T T + T A S ++PG
Sbjct: 3821 T--MSTATPSSTPETAHTS---TVLTTTATTTRATGSVATPSSTPG 3861
Score = 38.5 bits (88), Expect = 0.014
Identities = 51/210 (24%), Positives = 74/210 (35%), Gaps = 46/210 (21%)
Query: 141 SVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPST 200
+ T T P A + PG++ + L ++T T S G+ P ST
Sbjct: 4402 ATTTAATGPTATPSSTPGTTWILTELTTTATTT---------------ASTGSTATPSST 4446
Query: 201 GNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPP 256
+L +T +TVP G+ ++ + T + K P+ SP
Sbjct: 4447 PGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSP-- 4504
Query: 257 PGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLATPVV 305
G + P LR IP SS L T SQ T P AT +
Sbjct: 4505 ------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTAT--M 4550
Query: 306 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSA 335
S TPS P+ + S + TA T T +
Sbjct: 4551 STATPSSTPETVHTSTVLTATATTTGATGS 4580
Score = 38.1 bits (87), Expect = 0.019
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 141 SVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPP-----QTTLHRNVSPGAPQ 195
SV P ++P ++T + + A+ + + + L+PP TT S P
Sbjct: 3295 SVATPSSTPGT-AHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPS 3353
Query: 196 RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNL------IGATGANSLGKVM 249
P T + +L+TT TV G+ ++P + S P+L I ATG+ +
Sbjct: 3354 SIPGTTHTATVLTTTTTTVATGSMATP-SSSTQTSGTPPSLTTTATTITATGSTTNPSST 3412
Query: 250 PTKSPPPPGGGNLGMNSRKP--DLRVVIPPSSKGM--MPPLNTQRISSSQATQPLATPVV 305
P +P PP L + P V P S+ G PP+ ++ + P ++P
Sbjct: 3413 PGTTPIPP---VLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLPPSSPHT 3469
Query: 306 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS 350
T + G++ + T +T S T A ++ ++P + S
Sbjct: 3470 VRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSS 3514
Score = 37.0 bits (84), Expect = 0.041
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 25/200 (12%)
Query: 135 PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLH 186
P + + T VTS A +++PG++ P+L A S T SS L T L
Sbjct: 2497 PHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLS 2556
Query: 187 RNVSPGA------PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT 240
+ +P A P P T + +L+TT T GS + + + ++ T
Sbjct: 2557 QTTTPTATMSTATPSSTPETVHTSTVLTTT-ATTTGATGSVATPSSTPGTAHTTKVLTTT 2615
Query: 241 GANSLGKVMPTKSPPPPGGGNLGM---NSRKPDLR--VVIPPSSKGMM-PPLNTQRISSS 294
T S P L + + P R V P S G P +++
Sbjct: 2616 TTG----FTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTT 2671
Query: 295 QATQPLATPVVSVTTPSLPP 314
AT +ATP S T PP
Sbjct: 2672 VATGSMATPSSSTQTSGTPP 2691
Score = 36.2 bits (82), Expect = 0.071
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 144 VPVTSPNALSYT---NPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPST 200
VP T+ + T +PG++L P +++T +P TT + S P P T
Sbjct: 4596 VPTTTTTGFTATPSSSPGTALTPPVWISTTT-------TPTTTTPTTSGSTVTPSSIPGT 4648
Query: 201 GNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGG 260
+ +L+TT TV G+ ++P + S P+L T A ++ T +P
Sbjct: 4649 THTARVLTTTTTTVATGSMATP-SSSTQTSGTPPSL--TTTATTITATGSTTNP------ 4699
Query: 261 NLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYS 320
S P + P + P T ++S ++ AT + +T+ + ++
Sbjct: 4700 -----SSTPGTTPITPVLTSTATTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFT 4754
Query: 321 AMPTA 325
+P++
Sbjct: 4755 PIPSS 4759
Score = 35.8 bits (81), Expect = 0.092
Identities = 55/241 (22%), Positives = 82/241 (34%), Gaps = 46/241 (19%)
Query: 135 PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLH 186
P + + T VTS A ++PG++ P+L A S T SS L T L
Sbjct: 4482 PHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLS 4541
Query: 187 RNVSPGA------PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT 240
+ +P A P P T + +L+ T T GA S AT
Sbjct: 4542 QTTTPTATMSTATPSSTPETVHTSTVLTATATT--TGATGSV----------------AT 4583
Query: 241 GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPL 300
+++ G TK P G S P + P P T +S P
Sbjct: 4584 PSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPS 4643
Query: 301 ATP-------VVSVTTPSL-------PPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSP 346
+ P V++ TT ++ P S P + T + +A S ++P
Sbjct: 4644 SIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTP 4703
Query: 347 G 347
G
Sbjct: 4704 G 4704
Score = 35.4 bits (80), Expect = 0.12
Identities = 56/237 (23%), Positives = 87/237 (36%), Gaps = 51/237 (21%)
Query: 139 SMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLHRNVS 190
S + T V S A ++PG++ P+L A S T SS L T L + +
Sbjct: 3201 STATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTT 3260
Query: 191 PGA------PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANS 244
P A P P T + +L+TT T +RA+ ++ AT +++
Sbjct: 3261 PTATMSTATPSSTPETVHTSTVLTTTTTT----------------TRATGSV--ATPSST 3302
Query: 245 LGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIP--------PSSKGMMPPLNTQRISSSQA 296
G TK P G S P + P P+++G +T SS
Sbjct: 3303 PGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRG-----STVTPSSIPG 3357
Query: 297 TQPLATPVVSVTTP------SLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
T AT + + TT + P S P + T + +A S ++PG
Sbjct: 3358 TTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPG 3414
Score = 34.3 bits (77), Expect = 0.27
Identities = 55/215 (25%), Positives = 81/215 (37%), Gaps = 42/215 (19%)
Query: 141 SVTVPVTSPNA------LSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP 194
S++ P ++P L+ ++ P+ SST + +L+ P TT V G+
Sbjct: 3124 SMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGST 3183
Query: 195 QRPPSTGNAGGMLS--TTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 252
ST G L T+ T P ++SRA+P+ T A +L + T
Sbjct: 3184 ATASSTRATAGTLKVLTSTATTPT----------VISSRATPSSSPGT-ATALPALRSTA 3232
Query: 253 SPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSL 312
+ P IP SS L T SQ T P AT +S TPS
Sbjct: 3233 TTPTATS------------VTAIPSSS------LGTAWTRLSQTTTPTAT--MSTATPSS 3272
Query: 313 PPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
P+ + S T T + T A S ++PG
Sbjct: 3273 TPETVHTS---TVLTTTTTTTRATGSVATPSSTPG 3304
Score = 34.3 bits (77), Expect = 0.27
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 23/204 (11%)
Query: 141 SVTVPVTSPNALSYTNPGSSL-----VSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQ 195
SV P ++P T ++ V+PS + + T +S TT + S P
Sbjct: 3852 SVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTT-TTPTTSGSTVTPS 3910
Query: 196 RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPP 255
P T + +L+TT TV G+ ++P + S P+LI T A ++ T +P
Sbjct: 3911 SVPGTTHTPTVLTTTTTTVATGSMATP-SSSTQTSGTPPSLI--TTATTITATGSTTNPS 3967
Query: 256 PPGGGNLGMNSRKPDLRVVIPP--SSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP 313
G IPP ++ P + ++ S A TP V TT +
Sbjct: 3968 STPG------------TTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTH 4015
Query: 314 PQGLVYSAMPTAYNTDYSLTSADL 337
+ L S+ T S TS L
Sbjct: 4016 GRSLSPSSPHTVRTAWTSATSGTL 4039
Score = 33.5 bits (75), Expect = 0.46
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 17/196 (8%)
Query: 134 PPQNFSMSVT------------VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPP 181
PP S + T +P T+ A T +++ + S+A S+ T +S P
Sbjct: 3333 PPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPS 3392
Query: 182 QTTLHRNV-SPGAPQRPPSTGNAGGM--LSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 238
TT + + G+ P ST + + TT T P S+ + + + +P +
Sbjct: 3393 LTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPN 3452
Query: 239 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 298
T A + G+ +P SP S + PS+ P T ++ +T
Sbjct: 3453 TT-ATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTS-TTQHSTP 3510
Query: 299 PLATPVVSVTTPSLPP 314
L++P S T PP
Sbjct: 3511 ALSSPHPSSRTTESPP 3526
Score = 33.5 bits (75), Expect = 0.46
Identities = 46/221 (20%), Positives = 77/221 (34%), Gaps = 26/221 (11%)
Query: 130 PPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNV 189
P +P + +V T+ A SS S S +T ++ ++ +T + +
Sbjct: 3909 PSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSS 3968
Query: 190 SPGAPQRPP-STGNAGGMLSTTDLTVPNGA----GSSPVGN------GFVNSRASPNLIG 238
+PG PP T A +T+ P+ A + PV N G S +SP+ +
Sbjct: 3969 TPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVR 4028
Query: 239 ATGANSLGKVMPTKSPPPPGGGNL---------------GMNSRKPDLRVVIPPSSKGMM 283
++ + T P G ++S P R P S G
Sbjct: 4029 TAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTT 4088
Query: 284 PPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPT 324
P +T S + AT + S PS P + + + T
Sbjct: 4089 TPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPITTVVTT 4129
Score = 33.1 bits (74), Expect = 0.60
Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 24/208 (11%)
Query: 137 NFSMSVTVPVTSPNALSYTNPGSS--LVSPSLAASSTLTDSSMLSPPQ------------ 182
++S + P TS A + PG++ L P+ A++T + S +P
Sbjct: 1884 DYSHCPSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLT 1943
Query: 183 ---TTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGA 239
TT S P P T A L +T T P +P+ + + + +
Sbjct: 1944 TTATTPTVTSSKATPSSSPGTATALPALRST-ATTPTATSVTPIPSSSLGTTWTRLSQTT 2002
Query: 240 TGANSLGKVMPTKSPPPPGGGNL---GMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQA 296
T ++ P+ +P + + V P S+ G +T ++ ++
Sbjct: 2003 TPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPG---TAHTTKVPTTTT 2059
Query: 297 TQPLATPVVSVTTPSLPPQGLVYSAMPT 324
T ATP S T PP + + PT
Sbjct: 2060 TGFTATPSSSPGTALTPPVWISTTTTPT 2087
Score = 33.1 bits (74), Expect = 0.60
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 31/211 (14%)
Query: 130 PPGLPPQNFSMSVTVPVTSPNAL-SYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRN 188
P +P + +V T+ A S P SS + S T T +++ + TT + +
Sbjct: 2652 PSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTT-NPS 2710
Query: 189 VSPGAPQRPP-STGNAGGMLSTTDLTVPNGA----GSSPVGN------GFVNSRASPNLI 237
+PG PP T A +T+ P+ A + PV N G S +SP+ +
Sbjct: 2711 STPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTV 2770
Query: 238 GATGANSLGKVMPTKSPPPPGGGNL---------------GMNSRKPDLRVVIPPSSKGM 282
++ + T P G ++S P R P S G
Sbjct: 2771 RTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGT 2830
Query: 283 MPPLNTQRISSSQATQPLATPVVSVTTPSLP 313
P +T+ S + AT ATP + T+ LP
Sbjct: 2831 TTPGHTRATSRTTAT---ATPSKTRTSTLLP 2858
Score = 33.1 bits (74), Expect = 0.60
Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 137 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 196
N+ + P TS A+ + PG++ + L ++T T S+ S P
Sbjct: 4227 NYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTAST------------GSTATPSS 4274
Query: 197 PPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLG-KVMPTKSPP 255
P T +L T+ T P S + + + ++ +T S V P S
Sbjct: 4275 TPGTAPPPKVL-TSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSST 4333
Query: 256 PPGGGNLGMNSRKPDLRV-VIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPP 314
G L + P + I PSS +T + +++AT AT S +TPS P
Sbjct: 4334 LGTTGTLPEQTTTPVATMSTIHPSS--TPETTHTSTVLTTKATTTRATS--STSTPSSTP 4389
Score = 32.7 bits (73), Expect = 0.78
Identities = 48/181 (26%), Positives = 61/181 (33%), Gaps = 33/181 (18%)
Query: 157 PGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAG--GMLSTTDLTV 214
P + S + SST + +L+ P TT S G+ P ST + TT T
Sbjct: 1889 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATT 1948
Query: 215 PNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVV 274
P S +SP A A PT + P
Sbjct: 1949 PTVTSSK------ATPSSSPGTATALPALRSTATTPTATSVTP----------------- 1985
Query: 275 IPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTS 334
IP SS L T SQ T P AT +S TPS P+ S + TA T T
Sbjct: 1986 IPSSS------LGTTWTRLSQTTTPTAT--MSTATPSSTPETAHTSTVLTATATTTGATG 2037
Query: 335 A 335
+
Sbjct: 2038 S 2038
Score = 30.8 bits (68), Expect = 3.0
Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 31/186 (16%)
Query: 137 NFSMSVTVPVTSPNALSYTNPGSS--LVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP 194
N+ + P TS A + PG++ L + AA++T T S P T PG
Sbjct: 2970 NYGHCPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSST-------PGTA 3022
Query: 195 QRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSP 254
P + T+ T P S + + + ++ +T S T
Sbjct: 3023 PPP--------KVLTSTATTPTATSSKATSSSSPRTATTLPVLTSTATKSTA----TSFT 3070
Query: 255 PPPGGGNLGMNSRKPDLRVVIPPSSKGMMPP------LNTQRISSSQATQPLATPVVSVT 308
P P LG P+ + P ++ + P +T + +++AT AT S++
Sbjct: 3071 PIP-SFTLGTTGTLPE-QTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATS--SMS 3126
Query: 309 TPSLPP 314
TPS P
Sbjct: 3127 TPSSTP 3132
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 56.2 bits (134), Expect = 7e-08
Identities = 121/490 (24%), Positives = 170/490 (34%), Gaps = 97/490 (19%)
Query: 71 EYNEPHESRTNSDI--------VETLRKKGLNGCESPDADDYFEH----SPLSEDRFSKL 118
E N P +++T ++ +++L + LN S D D + SP S
Sbjct: 83 ETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVE 142
Query: 119 NE-DSDFIFKRGP--PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDS 175
N+ DS +GP P PP F S P ++P P +S P + + T +
Sbjct: 143 NDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR-----QPEASF-EPHPSVTPTGYHA 196
Query: 176 SMLSPPQTTLHRNVSPGAPQRPPST--GNAGGMLSTTDLTVPNGAGSSPVG--NGFVNSR 231
M P T+ PGAP P G GG+LS + G +S VG NG
Sbjct: 197 PM--EPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Query: 232 ASPNLIGATGANSLGKVMPTKSPPPP-GGGNLGMNSRKPDLRVVIP--PSSKGMMPPLNT 288
I + + + G PTK P P GGGNL + V P P + P N
Sbjct: 255 PPTTPISVSSSGASG-APPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 289 QRISSSQATQPLAT----------------------PVVSVTTPSLPPQGLVYSAMPTAY 326
QPL P ++ + SLPP A P +
Sbjct: 314 SASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF 373
Query: 327 NTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ---QHHLGQAALSSLVAGGQLSQGSNLS 383
YS +S+ +A +S S A Q + +SL Q + + S
Sbjct: 374 --PYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPS 431
Query: 384 INTNQNISIKSEPISPPRDRMT------PSGF---------------------------Q 410
+ +Q + + P PP R+ P F Q
Sbjct: 432 L-PSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQ 490
Query: 411 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSP 470
QQQQQQQQQQ P PP P G S + + S GS R P G H P
Sbjct: 491 QQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLP 550
Query: 471 IVLGRPPNTE 480
PP+++
Sbjct: 551 -----PPHSQ 555
Score = 30.8 bits (68), Expect = 3.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 385 NTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 444
N + + SI S P S D + SG Q + PPP P PQPP PRQ
Sbjct: 128 NRSTSPSIYS-PGSVENDSDSSSGLSQGPARPYH--PPPLFPPSPQPPDSTPRQ------ 178
Query: 445 VDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESP 485
+S++ P G +H+P+ PP + ++P
Sbjct: 179 ------PEASFEPHPSVTPTG-YHAPM---EPPTSRMFQAP 209
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 56.2 bits (134), Expect = 7e-08
Identities = 121/490 (24%), Positives = 170/490 (34%), Gaps = 97/490 (19%)
Query: 71 EYNEPHESRTNSDI--------VETLRKKGLNGCESPDADDYFEH----SPLSEDRFSKL 118
E N P +++T ++ +++L + LN S D D + SP S
Sbjct: 83 ETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVE 142
Query: 119 NE-DSDFIFKRGP--PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDS 175
N+ DS +GP P PP F S P ++P P +S P + + T +
Sbjct: 143 NDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR-----QPEASF-EPHPSVTPTGYHA 196
Query: 176 SMLSPPQTTLHRNVSPGAPQRPPST--GNAGGMLSTTDLTVPNGAGSSPVG--NGFVNSR 231
M P T+ PGAP P G GG+LS + G +S VG NG
Sbjct: 197 PM--EPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Query: 232 ASPNLIGATGANSLGKVMPTKSPPPP-GGGNLGMNSRKPDLRVVIP--PSSKGMMPPLNT 288
I + + + G PTK P P GGGNL + V P P + P N
Sbjct: 255 PPTTPISVSSSGASG-APPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 289 QRISSSQATQPLAT----------------------PVVSVTTPSLPPQGLVYSAMPTAY 326
QPL P ++ + SLPP A P +
Sbjct: 314 SASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF 373
Query: 327 NTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ---QHHLGQAALSSLVAGGQLSQGSNLS 383
YS +S+ +A +S S A Q + +SL Q + + S
Sbjct: 374 --PYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPS 431
Query: 384 INTNQNISIKSEPISPPRDRMT------PSGF---------------------------Q 410
+ +Q + + P PP R+ P F Q
Sbjct: 432 L-PSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQ 490
Query: 411 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSP 470
QQQQQQQQQQ P PP P G S + + S GS R P G H P
Sbjct: 491 QQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLP 550
Query: 471 IVLGRPPNTE 480
PP+++
Sbjct: 551 -----PPHSQ 555
Score = 30.8 bits (68), Expect = 3.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 385 NTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 444
N + + SI S P S D + SG Q + PPP P PQPP PRQ
Sbjct: 128 NRSTSPSIYS-PGSVENDSDSSSGLSQGPARPYH--PPPLFPPSPQPPDSTPRQ------ 178
Query: 445 VDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESP 485
+S++ P G +H+P+ PP + ++P
Sbjct: 179 ------PEASFEPHPSVTPTG-YHAPM---EPPTSRMFQAP 209
>gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
Length = 345
Score = 54.7 bits (130), Expect = 2e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 294 SQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADLSALQGFNSPGMLS 350
+Q P++ P SV++ PP G + PT + T+A +A + F S M +
Sbjct: 136 AQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATK-FGSTKMKN 194
Query: 351 LGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 410
G+ ++++ S +++ N N +K + IS + G
Sbjct: 195 SGR-------------------SNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLG 235
Query: 411 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 444
QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
>gi|196114999 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 410 QQQQQQQQQQQPPPPPQPQPQP---PQPQPRQEMGRSPVDS 447
QQQQQQQQQQQ PPPPQPQ QP P+ PRQ SP +S
Sbjct: 597 QQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAES 637
>gi|4506791 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 410 QQQQQQQQQQQPPPPPQPQPQP---PQPQPRQEMGRSPVDS 447
QQQQQQQQQQQ PPPPQPQ QP P+ PRQ SP +S
Sbjct: 597 QQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAES 637
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 53.5 bits (127), Expect = 4e-07
Identities = 80/324 (24%), Positives = 114/324 (35%), Gaps = 37/324 (11%)
Query: 131 PGLPPQNFSMSVTVPVTS---PNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHR 187
P N ++S + P+ S A T G+S PS S ++ + H
Sbjct: 389 PAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAANRQQ-HA 447
Query: 188 NVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGK 247
+ Q P+ +A +P+ AG SP G SP+ T +
Sbjct: 448 RMQQHQQQHQPTNWSA----------LPSSAGPSPGPFG-QEKIPSPSFGQQTFS----- 491
Query: 248 VMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSV 307
P SP P G G + + PS++G + Q Q L+ ++
Sbjct: 492 --PQSSPMPGVAGGSGQSKVMANYMYKAGPSAQG-----GHLDVLMQQKPQDLSRSFINN 544
Query: 308 TTPSLPP-QGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAA 366
P++ P QG + P + S L N P +L Q QQ Q
Sbjct: 545 PHPAMEPRQG---NTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQ 601
Query: 367 LSSLVAGGQLSQGSNL-----SINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQP 421
Q Q SI+ Q +S IS + + QQQQQQQQQQQ
Sbjct: 602 QQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSS-ISAQQQQQQQQQQQQQQQQQQQQQQ 660
Query: 422 PPPPQPQPQPPQPQPRQEMGRSPV 445
QP QP Q P Q + RSP+
Sbjct: 661 QQQQQPSSQPAQSLPSQPLLRSPL 684
Score = 38.9 bits (89), Expect = 0.011
Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 29/267 (10%)
Query: 192 GAPQ-RPPSTGNAGGM----LSTTDL--TVPNGAGSSPVGNGFVNSRASPNLIGATGANS 244
G+PQ RPPS G A M LST+ +VP G+G SRA P+ + A
Sbjct: 378 GSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA--SRALPSWQEVSHAQQ 435
Query: 245 LGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPV 304
L ++ + + +P +P S+ P ++I S Q +P
Sbjct: 436 LKQIAANRQQHARMQQH--QQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSP- 492
Query: 305 VSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 364
S P G+ + + +Y + A SA G L + + L +
Sbjct: 493 -----QSSPMPGVAGGSGQSKVMANY-MYKAGPSAQGGH-------LDVLMQQKPQDLSR 539
Query: 365 AALSSLVAGGQLSQGSNLSI---NTNQ-NISIKSEPISPPRDRMTPSGFQQQQQQQQQQQ 420
+ +++ + QG+ + N++Q N + S S + + QQQQQQQQQQQ
Sbjct: 540 SFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQ 599
Query: 421 PPPPPQPQPQPPQPQPRQEMGRSPVDS 447
Q Q Q Q Q +Q+ +S + +
Sbjct: 600 QQQQQQQQQQQQQQQQQQQQQQSSISA 626
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 410 QQQQQQQQQQQPPPPPQPQPQPPQPQPRQ-EMGRSPVDSLSSSSSSYDGS 458
+++ QQQQQQQPP PP P PQPPQPQP P+ +SS +S GS
Sbjct: 246 KKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPVSSLQASVPGS 295
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 52.4 bits (124), Expect = 1e-06
Identities = 22/27 (81%), Positives = 22/27 (81%)
Query: 410 QQQQQQQQQQQPPPPPQPQPQPPQPQP 436
QQQQQQQQQQQPPPPP P P P PQP
Sbjct: 30 QQQQQQQQQQQPPPPPPPPPPPQLPQP 56
Score = 50.8 bits (120), Expect = 3e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 391 SIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 439
S+KS + + QQQQQQQQQ PPPPP P PQ PQP P+ +
Sbjct: 13 SLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQ 61
Score = 35.0 bits (79), Expect = 0.16
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 396 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQP------QPPQPQPRQEMGRSPVDSLS 449
P PP P Q Q Q QPPPPP P P + P +P++E+ + D ++
Sbjct: 44 PPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVN 103
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 52.4 bits (124), Expect = 1e-06
Identities = 77/330 (23%), Positives = 128/330 (38%), Gaps = 60/330 (18%)
Query: 149 PNALSYTNPGSSLVSPSLAASSTL-TDSSMLSPPQTTLHRNVSPGAPQRP-----PSTGN 202
P+A + +SL++P+ +AS L T + ++ PQT + SP P P PS G
Sbjct: 1560 PSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAP-SPAPPLAPLPVLAPSPG- 1617
Query: 203 AGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPP-PGGGN 261
A +L+++ VP A SS G ++ P +S ++P P P P +
Sbjct: 1618 AAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPAS 1677
Query: 262 LGMNSRKPDLRVVIPPSSKGM---------MPPLNTQRISSSQATQPLATPVVSVT---- 308
+ P L + SS P TQ +S + A+ + TP +++
Sbjct: 1678 TQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPG 1737
Query: 309 -------TPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHH 361
T SL P + A P ++LT A S+ +P + +S
Sbjct: 1738 PPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPT 1797
Query: 362 LGQAALSSLVAG-----GQLSQGSNLSINTN--------------------QNISIKSEP 396
LG AA +L SQ S+L ++ + ++++S P
Sbjct: 1798 LGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGP 1857
Query: 397 ISPPRDRMTPSGFQQQQQQQQQQQPPPPPQ 426
SPP + G + ++QPPPPP+
Sbjct: 1858 PSPPSTATSFGG------PRPRRQPPPPPR 1881
Score = 39.7 bits (91), Expect = 0.006
Identities = 78/358 (21%), Positives = 124/358 (34%), Gaps = 61/358 (17%)
Query: 131 PGLPPQNFSMSVTVPVTSPNALSYTNPG--------------SSLVSPSLAASSTLTDSS 176
P P S +T+P+++P +S + P ++ PSLA S +S
Sbjct: 1444 PTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSAS 1503
Query: 177 MLSPPQTTLHRNVSPGAPQRP----PSTGNAGGMLST-----TDLTVPNGAGSSPVGNGF 227
L+ T S P P P++ + G+ ST + + VP A +SP +
Sbjct: 1504 ALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAP 1563
Query: 228 VNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMP--- 284
+ A +L+ + S P P L + P + + S G P
Sbjct: 1564 NPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLA 1623
Query: 285 ----PLNTQRISSSQATQPLATPVVSVTTPSLPPQGL-------VYSAMPTAYNTDYSLT 333
P+ SS+ T + V TP L P V S +P+ +T
Sbjct: 1624 SSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLAL 1683
Query: 334 SADLSALQGFNSPGM-LSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISI 392
+ L+ G +SP LSLG + Q LS L+ S+L Q +S+
Sbjct: 1684 APALAPTLGGSSPSQTLSLGTGNP--QGPFPTQTLS-------LTPASSLVPTPAQTLSL 1734
Query: 393 KSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSS 450
P P ++ + P PP P P P + +P S +S
Sbjct: 1735 APGPPLGPTQTLSLA--------------PAPPLAPASPVGPAPAHTLTLAPASSSAS 1778
Score = 39.3 bits (90), Expect = 0.008
Identities = 83/329 (25%), Positives = 110/329 (33%), Gaps = 63/329 (19%)
Query: 131 PGLPPQNFSMSVTVPVTSPNALSYTNP---GSSLVSPSLAASSTLTDSSMLSPPQTTLHR 187
PG P S + VP + P S P S L SP + S SS+ TTL
Sbjct: 1390 PGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPA 1449
Query: 188 NVSPGA--PQRPPSTGNAGGMLSTTDLT------VPNGAGSSPVGNGFVNSRASPNLIGA 239
S P P T +A G T +T VP G + + AS +G
Sbjct: 1450 PASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGL 1509
Query: 240 TGANSLGKVMPTKSP---PPPGGGNLGMNSRKPDL--RVVIP--------PSSKGMMPPL 286
A SL P P G+NS V++P PS+ P
Sbjct: 1510 ATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQ 1569
Query: 287 NTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSP 346
+ +S A+Q LATP+ P PQ + + P A L L SP
Sbjct: 1570 ASLLAPASSASQALATPL----APMAAPQTAILAPSPAP-------PLAPLPVLA--PSP 1616
Query: 347 GMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTP 406
G V A Q + A SS + G++L+ + P+ P + P
Sbjct: 1617 G---AAPVLASSQTPVPVMAPSS-------TPGTSLA---------SASPVPAPTPVLAP 1657
Query: 407 SGFQQQQQQQQQQQPPPPPQPQPQPPQPQ 435
S Q P P P P P P Q
Sbjct: 1658 S-------STQTMLPAPVPSPLPSPASTQ 1679
Score = 38.5 bits (88), Expect = 0.014
Identities = 78/351 (22%), Positives = 117/351 (33%), Gaps = 74/351 (21%)
Query: 129 GPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRN 188
GPP +P V +P PN+ S P + S S PP TL
Sbjct: 1057 GPPLIPASRPPGPVLLPPLQPNSGSL---------PQVLPSPLGVLSGTSRPPTPTLSLK 1107
Query: 189 VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKV 248
+P AP R G LTVP G P A+ T A +
Sbjct: 1108 PTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPP---------AAATTTSTTTATATTTA 1158
Query: 249 MPTKSPPPPGGGNLGMNSRKPDLRVVIPPS---SKGMMPPLNTQRISSSQATQPLATPVV 305
+P +P P PD++ +P S G + L + ++++ ++PL +
Sbjct: 1159 VPAPTPAPQ------RLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQI- 1211
Query: 306 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS---LGQVSAWQQHHL 362
QG +LT A + L P L + VSA QHHL
Sbjct: 1212 ---------QG-----------NKLTLTGAQVRQL-AVGQPRPLQRNVVHLVSAGGQHHL 1250
Query: 363 -GQAALSSLVAGGQLSQG------------SNLSINTNQNISIKSEPISPPRDRMTPS-G 408
Q A +L+ + G S T ++ + + + P T
Sbjct: 1251 ISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVK 1310
Query: 409 FQQQQQQQQQQQPPPPPQPQPQPPQ--------PQPRQEMGRSPVDSLSSS 451
+Q + P PP P P+PP P+P GR P +L ++
Sbjct: 1311 IVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTA 1361
Score = 34.7 bits (78), Expect = 0.21
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 30/203 (14%)
Query: 129 GPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSM----LSP-PQT 183
GPP P Q S++ P+ + + + ++P+ +++S L +S+ LSP P
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVP 1796
Query: 184 TLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVN----SRASPNLI-- 237
TL + P ST + S+ V + +G++P+ V+ S+ P+ +
Sbjct: 1797 TLGPAAAQTLALAPASTQSPASQASS---LVVSASGAAPLPVTMVSRLPVSKDEPDTLTL 1853
Query: 238 ------GATGANSLGKVMPTKSPPPPGGGNLGMNS--------RKPDLRVVIPPSSK--G 281
+ A S G P + PPPP ++S R L + S
Sbjct: 1854 RSGPPSPPSTATSFGGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGA 1913
Query: 282 MMPPLNTQRISSSQATQPLATPV 304
+ P T+ + QP+A+P+
Sbjct: 1914 LAPVYGTEVLDFCTLPQPVASPI 1936
Score = 30.8 bits (68), Expect = 3.0
Identities = 85/356 (23%), Positives = 123/356 (34%), Gaps = 75/356 (21%)
Query: 131 PGLPPQNFSMSVTVPVTSPNALSYTNP-GSSLVSPSLAASSTLTDSSMLSPPQTTLHRNV 189
PG P + S T P T+P + P ++ V P++ ++ + + P+ L V
Sbjct: 1267 PGPTPVSVLPSST-PSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGL-TPV 1324
Query: 190 SPGAPQ-RPPSTG-----NAGGMLSTTDLTVPN-GAGSSPVGNG--------FVNSRASP 234
P AP RPPS+G N L+ L P G +P+ V+S +
Sbjct: 1325 PPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPE 1384
Query: 235 NLIGATGANSLGKVMPTKSP---PPPGGGNLGMNSRKPDLRVVIPPSSKGMMP-----PL 286
A GA L P P P P + + + P + P SS +P P+
Sbjct: 1385 VSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSP---LASPVSSTVSVPLSSSLPI 1441
Query: 287 NTQRISSSQATQPLATPV-----VSVTTPSL-----PPQGLVYSAMPTAYNTDYSLTSAD 336
+ + A+ PL P+ VS + P+L PP V A P + S S
Sbjct: 1442 SVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPS 1501
Query: 337 LSALQ-GFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSE 395
SAL G + LS Q H L A SS V G N ++
Sbjct: 1502 ASALTLGLATAPSLSSSQTPG---HPLLLAPTSSHVPG------------LNSTVAPACS 1546
Query: 396 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSS 451
P+ P + P P P P P Q +P S S +
Sbjct: 1547 PVLVPASALA--------------------SPFPSAPNPAPAQASLLAPASSASQA 1582
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 50.4 bits (119), Expect = 4e-06
Identities = 79/311 (25%), Positives = 109/311 (35%), Gaps = 39/311 (12%)
Query: 157 PGSSLVSPSLAASSTLTDSSMLSP-----PQTTLHRNVSPGAPQRPPSTGNAGGML---- 207
P L P A S + P PQT +P Q +TG + +L
Sbjct: 2520 PPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTI 2579
Query: 208 --STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 265
S T ++P GA S GN VN+ A + A S+ K + SP PG
Sbjct: 2580 KTSVTGTSMPTGAVS---GNVIVNTIAG---VPAATFQSINKRLA--SPVAPGALTTPGG 2631
Query: 266 SRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTA 325
S + PP P T + S TQ + V SVT ++ L T
Sbjct: 2632 SAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRA-VTSVTASAVVTTNL------TP 2684
Query: 326 YNTDYSLTSADLSALQGFNSPG--------MLSLGQVSAWQQHHLGQAALSSLVAGGQLS 377
T +S G PG L Q QQ Q Q
Sbjct: 2685 VQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQ 2744
Query: 378 QGSNLSINTNQNISIKSEPISPPR----DRMTPSGFQQQQQQQQQQQP-PPPPQPQPQPP 432
Q + + Q I+ + SP + ++TP + Q+Q+ Q P PPPPQ Q PP
Sbjct: 2745 QQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPP 2804
Query: 433 QPQPRQEMGRS 443
QP + ++ S
Sbjct: 2805 QPTAQVQVQTS 2815
Score = 40.0 bits (92), Expect = 0.005
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 388 QNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP 436
Q S+++E I+ + + QQ+ QQ PPPPQPQP PP QP
Sbjct: 2476 QVASLRAERIAKEKKALA----DQQKAQQPAVAQPPPPQPQPPPPPQQP 2520
Score = 32.7 bits (73), Expect = 0.78
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 395 EPISPPRDRMTPSGFQQQQQQQQQQQPPPPP-QPQPQP-PQPQPR 437
+P PP + P Q Q Q PP QPQPQP PQ QP+
Sbjct: 2510 QPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQ 2554
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.4 bits (119), Expect = 4e-06
Identities = 102/418 (24%), Positives = 153/418 (36%), Gaps = 64/418 (15%)
Query: 111 SEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTN-----PGSSLVSPS 165
S R + ++ + R P N + S T +P +L+ G++L SP
Sbjct: 2325 SSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPR 2384
Query: 166 LAASSTLTDSSMLSPPQTTLHRN-VSPGAP-------QRPPSTGNAGGMLSTTDLTVP-N 216
+ S+ S SPP R+ P AP +R PS + G + L P
Sbjct: 2385 VPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQ 2444
Query: 217 GAGSSPVGNGFVNSRASPNLIGAT----GANSL--GKVMPTKSPPPPGGGNLGMNSRK-P 269
SPV + F S S LI T G+ SL G V T S G L + + P
Sbjct: 2445 DQPRSPVPSAF--SDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVP 2502
Query: 270 DLRVVIPPSSKGM--------MPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYS- 320
V PP+S G + P +R SSS ++ ++ S ++ S G S
Sbjct: 2503 HSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD 2562
Query: 321 ----AMPT----AYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVA 372
++P A S T A A++ P + ++ SS +
Sbjct: 2563 SEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSS 2622
Query: 373 GGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPP 432
S S+ S +++ + S S SP + P Q P P +PP
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP-------------QALPKPASPKKPP 2669
Query: 433 QPQPRQEMGRSPVDSLSSSSS-SYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKR 489
+ R R P+DSL S S SY +R P SP P+ D++S S +R
Sbjct: 2670 PGERRSRSPRKPIDSLRDSRSLSYSPVERRRP-----SP-----QPSPRDQQSSSSER 2717
Score = 45.1 bits (105), Expect = 2e-04
Identities = 89/379 (23%), Positives = 141/379 (37%), Gaps = 73/379 (19%)
Query: 128 RGPPGLPPQNFSMSVT-VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLH 186
R PP + + ++ VP P T P ++L S AAS+ + + P
Sbjct: 2194 RPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTA 2253
Query: 187 RNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLG 246
N+ A R P+ A + S P+ + + + + NL GA +L
Sbjct: 2254 VNL---ADSRTPAAAAAMNLASPRTAVAPSAVN---LADPRTPTAPAVNLAGARTPAALA 2307
Query: 247 KVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVS 306
+ T S PP N +SR P P+S ++ P S+ AT P+ S
Sbjct: 2308 ALSLTGSGTPPTAANYPSSSRTPQ-----APASANLVGP------RSAHATAPV-NIAGS 2355
Query: 307 VTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAA 366
T +L P L + M A L+ A+L+ SP + +SA+++
Sbjct: 2356 RTAAALAPASLTSARMAPA------LSGANLT------SPRV----PLSAYER------- 2392
Query: 367 LSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMT----PSGFQQQQQQQQQQQPP 422
+S + L + + ++ P +P + RMT PS + Q Q
Sbjct: 2393 VSGRTSPPLLDRARS-----------RTPPSAPSQSRMTSERAPSP-SSRMGQAPSQSLL 2440
Query: 423 PPPQPQPQPPQPQPRQEMGR------SPV---DSLSSSSSSYDGSDREDPRGDFHSPIV- 472
PP Q QP+ P P + R +PV SLSS + + S D G P
Sbjct: 2441 PPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPG 2500
Query: 473 -----LGRPPNTEDRESPS 486
+G PP + + PS
Sbjct: 2501 VPHSDVGEPPASTGAQQPS 2519
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 392 IKSEPISPP------RDRMTPSGFQQQQQQQQQQQPPPPPQP---------QPQPPQPQP 436
+ EP++PP RDR P ++ Q + PP PQP P+ P+P P
Sbjct: 386 LSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAP 445
Query: 437 RQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSP 470
R S +S + S+ + R+ + H+P
Sbjct: 446 APGSHREISSSPTSKNRSHGRAKRD--KSHSHTP 477
Score = 37.4 bits (85), Expect = 0.032
Identities = 74/347 (21%), Positives = 125/347 (36%), Gaps = 32/347 (9%)
Query: 128 RGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL-----AASSTLTDSSMLSPPQ 182
R PP P Q+ S P SP++ P SL+ P+ S +D S Q
Sbjct: 2408 RTPPSAPSQSRMTSERAP--SPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQ 2465
Query: 183 TTL---HRNVSPGAPQRPPST-GNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSRASPNLI 237
TT +++S GA S+ G+ GMLS VP+ G P G A L
Sbjct: 2466 TTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQ 2525
Query: 238 GA---------TGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNT 288
A + ++S + S G+ +S L V + K + P
Sbjct: 2526 PAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA 2585
Query: 289 QRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGM 348
+ + + P TP S S+ ++ ++ S +S+ S+ +S
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2645
Query: 349 LSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNL----SINTNQNISI------KSEPIS 398
S + L + A G+ S S+ ++++S + P
Sbjct: 2646 SSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQP 2705
Query: 399 PPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP-RQEMGRSP 444
PRD+ + S + ++ Q+ P + + + P P+P R RSP
Sbjct: 2706 SPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 35.4 bits (80), Expect = 0.12
Identities = 77/344 (22%), Positives = 120/344 (34%), Gaps = 33/344 (9%)
Query: 163 SPSLAASST--LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGS 220
SP SST S S PQ + +SP QR S ++ T T P + S
Sbjct: 895 SPPRVKSSTPPRQSPSRSSSPQPKVKAIISPR--QRSHSGSSSPSPSRVTSRTTPRRSRS 952
Query: 221 -SPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPP-- 277
SP N V SR P + ++ KV P PP + G S P ++ PP
Sbjct: 953 VSPCSN--VESRLLPRYSHSGSSSPDTKVKPET---PPRQSHSGSISPYPKVKAQTPPGP 1007
Query: 278 SSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADL 337
S G P ++ S + + S P G Y + + S TS D
Sbjct: 1008 SLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDH 1067
Query: 338 SA--------LQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAG-------GQLSQGSNL 382
+ SP + S Q S + ++ L + G+ S L
Sbjct: 1068 RSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPML 1127
Query: 383 SINTNQNIS-IKSEPISPPR-DRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEM 440
+ S +S+ S P D + G + + + +++ PPQ P+ + +
Sbjct: 1128 KSGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKF 1187
Query: 441 GRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRES 484
PV SS + + R PR + G P T+++ S
Sbjct: 1188 SPFPVQDRPESSLVFKDTLRTPPRERSGA----GSSPETKEQNS 1227
Score = 33.5 bits (75), Expect = 0.46
Identities = 54/217 (24%), Positives = 80/217 (36%), Gaps = 22/217 (10%)
Query: 128 RGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHR 187
R PP + ++ S S + S + N S P SS ++ S S T L R
Sbjct: 2070 RSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDR 2129
Query: 188 NVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAG---SSPVGNGFVNSRASPNLIGATGANS 244
SPG + S+ +L ++ +G G + A + A A S
Sbjct: 2130 CRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAIS 2189
Query: 245 LGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLN-TQRISSSQATQPLATP 303
LG + PPP G+ +R + +P S P N RI ++ A A
Sbjct: 2190 LG-----TARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAA---AMN 2241
Query: 304 VVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSAL 340
+ S TP A+PTA N S T A +A+
Sbjct: 2242 LASARTP----------AIPTAVNLADSRTPAAAAAM 2268
Score = 31.2 bits (69), Expect = 2.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 145 PVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL--HRNVSPGAPQRPPSTGN 202
PV P+ S T S SP S+ ++SS SP T + H + SP +P+ P+ G+
Sbjct: 390 PVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGS 449
Score = 30.8 bits (68), Expect = 3.0
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 391 SIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSS 450
S +S P PP+ R G + + + + + PP + P+ + + R S
Sbjct: 1654 STESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS----RS 1709
Query: 451 SSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRES 484
+SSS + R PR SP V P + R S
Sbjct: 1710 ASSSPETRSRTPPR-HRRSPSVSSPEPAEKSRSS 1742
Score = 30.4 bits (67), Expect = 3.9
Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 23/167 (13%)
Query: 333 TSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQG----SNLSINTNQ 388
TSAD ++ +S S + +A + H A S A G+ +G S + Q
Sbjct: 264 TSADSAS----SSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQ 319
Query: 389 NIS----IKSEPISP----PRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQ-------PPQ 433
S +P SP +D+ S + ++ P PP P P PQ
Sbjct: 320 RPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQ 379
Query: 434 PQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTE 480
P + + PV+ S +S + D S + P S PP+ +
Sbjct: 380 PLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQ 426
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 50.1 bits (118), Expect = 5e-06
Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 39/403 (9%)
Query: 49 NSSNKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHS 108
++ NKLF +D++ ++ E + + D ++ L + + P+ +
Sbjct: 293 SNQNKLF----SDINLNDQEWQELIDELANTVPEDDIQDLFNEDFEEKKEPEFSQPATET 348
Query: 109 PLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAA 168
PLS++ S ++ S F G P S S T A S + S+ +P+ A+
Sbjct: 349 PLSQESASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTATSLPSVASTPAAPNPAS 408
Query: 169 SSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFV 228
S + + PQT + +PG Q PP GN G +L+ +TV G+ S PV
Sbjct: 409 SPA---NCAVQSPQTPNQAH-TPG--QAPPRPGN-GYLLNPAAVTVA-GSASGPVAVPSS 460
Query: 229 NSRASPNLIG-ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLN 287
+ + L A K+M K ++ + + +
Sbjct: 461 DMSPAEQLKQMAAQQQQRAKLMQQKQ-------------QQQQQQQQQQQQQQQQQQQQH 507
Query: 288 TQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
+ + S+ P ++P + T P ++Y P A+N + + LQ
Sbjct: 508 SNQTSNWSPLGPPSSPYGAAFTAEKPNSPMMY---PQAFNNQNPIVPPMANNLQKTTMNN 564
Query: 348 MLSLGQVSAWQQ--HHLGQAALSSLVAGGQLSQGSNLSI-NTNQNISIKSEP--ISPPRD 402
L ++ Q ++LG +L+ L+ G+ + + N ++S + P +P ++
Sbjct: 565 YLPQNHMNMINQQPNNLGTNSLNK--QHNILTYGNTKPLTHFNADLSQRMTPPVANPNKN 622
Query: 403 RMTP---SGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGR 442
+ P QQQQQQQQQQQ PP PQ Q P+ ++ R
Sbjct: 623 PLMPYIQQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKR 665
Score = 32.3 bits (72), Expect = 1.0
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 14/71 (19%)
Query: 394 SEPISPPRDRMTP--------------SGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 439
S P++ P M+P + QQ+QQQQQQQ Q Q Q Q Q
Sbjct: 452 SGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQT 511
Query: 440 MGRSPVDSLSS 450
SP+ SS
Sbjct: 512 SNWSPLGPPSS 522
Score = 31.6 bits (70), Expect = 1.7
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 15/175 (8%)
Query: 292 SSSQATQPLATPV--VSVTTPSLPPQ--GLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 347
S+S + P +P VS+ +P P G +S + TA T ++ +A +SP
Sbjct: 354 SASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTA--TSLPSVASTPAAPNPASSPA 411
Query: 348 MLSLGQVSAWQQHHL-GQAALSSLVAGGQLSQGSNLSI--NTNQNISIKSEPISPPRDRM 404
++ Q H GQA G L + +++ + + +++ S +SP
Sbjct: 412 NCAVQSPQTPNQAHTPGQAPPRP--GNGYLLNPAAVTVAGSASGPVAVPSSDMSPAEQLK 469
Query: 405 TPSGFQQQQ----QQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSY 455
+ QQQ+ QQ+QQQQ Q Q Q Q Q + S L SS Y
Sbjct: 470 QMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSNWSPLGPPSSPY 524
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 135 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 250
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 251 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 309
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 310 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 364
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 134 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 253
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 254 PPPPGGGN 261
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.7 bits (78), Expect = 0.21
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 128 RGPPG--LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL 185
+ PP PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 200 QAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 186 ------HRNVSPGAPQRPPSTGNAGGMLSTTDLTVPN 216
+ P + PP T A S T P+
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 135 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 250
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 251 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 309
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 310 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 364
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 134 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 253
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 254 PPPPGGGN 261
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.7 bits (78), Expect = 0.21
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 128 RGPPG--LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL 185
+ PP PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 200 QAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 186 ------HRNVSPGAPQRPPSTGNAGGMLSTTDLTVPN 216
+ P + PP T A S T P+
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 135 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 250
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 251 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 309
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 310 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 364
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 134 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 193
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 194 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 253
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 254 PPPPGGGN 261
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.7 bits (78), Expect = 0.21
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 128 RGPPG--LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL 185
+ PP PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 200 QAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTA 259
Query: 186 ------HRNVSPGAPQRPPSTGNAGGMLSTTDLTVPN 216
+ P + PP T A S T P+
Sbjct: 260 VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 49.7 bits (117), Expect = 6e-06
Identities = 94/391 (24%), Positives = 132/391 (33%), Gaps = 69/391 (17%)
Query: 97 ESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGPPGLPPQNFSMS--------VTVPVTS 148
E P D P +E+R K + KR P +++ M VTVP
Sbjct: 1765 EPPKTDKPGAAPPSTEERKKKSTKGK----KRSQPATKTEDYGMGPGRSGPYGVTVP--- 1817
Query: 149 PNALSYTNPGSSLVSPSLAASSTLTDSSMLSP---PQTTLHRNVSPGAPQRPPSTGNAGG 205
P+ L + NPGS S L + P P+ +R V Q+ P+ G
Sbjct: 1818 PDLLHHPNPGSITHLNYRQGSIGLYTQNQPLPAGGPRVDPYRPVRLPM-QKLPTRPTYPG 1876
Query: 206 MLSTTDLTVPNGAGSS-----------PVGNGFVNSRASPNLIGATGANSLGKVMPTKSP 254
+L TT V SS V G + G G +S+ ++ P+ S
Sbjct: 1877 VLPTTMTGVMGLEPSSYKTSVYRQQQPAVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSY 1936
Query: 255 P-------PPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSV 307
P ++G+ ++PPS Q+T P P +
Sbjct: 1937 GLQTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQ----------PYQSTHPSTNPTLVD 1986
Query: 308 TTPSLP--PQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS-LGQVSAW------- 357
T L P G V+ PT + LTS + Q M+S + +SA
Sbjct: 1987 PTRHLQQRPSGYVHQQAPTY---GHGLTSTQRFSHQTLQQTPMISTMTPMSAQGVQAGVR 2043
Query: 358 ---------QQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSG 408
QQ Q Q Q I Q I + + +
Sbjct: 2044 STAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQ 2103
Query: 409 FQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 439
QQQQQQQQQQQ Q Q PPQPQP+ +
Sbjct: 2104 QQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQ 2134
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 49.3 bits (116), Expect = 8e-06
Identities = 76/308 (24%), Positives = 114/308 (37%), Gaps = 59/308 (19%)
Query: 220 SSPVGNGFVNS--RASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPP 277
SSP+ V S A+P L+ A K S P P G GM +P L+ P
Sbjct: 2062 SSPLQQQQVLSILHANPQLLAAFIKQRAAKY--ANSNPQPIPGQPGMPQGQPGLQPPTMP 2119
Query: 278 SSKGM-----MPPLNTQRISSSQATQPLATPVVSVTTP--SLPPQG----LVYSAMPTAY 326
+G+ M +N + +A P P + P + PQ + ++ MP+ +
Sbjct: 2120 GQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPMGGMSPQAQQMNMNHNTMPSQF 2179
Query: 327 NT----DYSLTSADLSALQGFNSPGMLSLGQVSAWQ------------QHHLGQAALSSL 370
+ PGM + Q Q QHH+ Q ++
Sbjct: 2180 RDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNM 2239
Query: 371 VAGGQLSQG----SNLSINTNQNISIKSE---PISP----PRDRMTPSGFQQQQQQQQQ- 418
GQL Q + S+ Q ++ + P+ P P+ M P+ Q Q QQ
Sbjct: 2240 GQIGQLPQALGAEAGASLQAYQQRLLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQI 2299
Query: 419 ----------QQPPPPPQPQPQPP--QPQPRQEMGRSPVDSLSSSSSSYDG--SDREDP- 463
QP P P+PQ QPP P PR + SP +SS + G + + +P
Sbjct: 2300 PNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPM 2359
Query: 464 -RGDFHSP 470
+G F SP
Sbjct: 2360 EQGHFASP 2367
Score = 34.3 bits (77), Expect = 0.27
Identities = 62/308 (20%), Positives = 109/308 (35%), Gaps = 28/308 (9%)
Query: 163 SPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP-QRPPSTGNAGGMLSTTDLTVPNGAGSS 221
+P L L L+PP R P Q P T ++ T++ + +G +
Sbjct: 730 TPPLQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQA 789
Query: 222 PVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIP---PS 278
PV ++S + P S G + P P L NS P +P P+
Sbjct: 790 PVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPA---LHQNSPSP-----VPSRTPT 841
Query: 279 SKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLS 338
P + Q+ ++ P+ TP P++PP + P T T+
Sbjct: 842 PHHTPPSIGAQQPPATTIPAPVPTP------PAMPPGPQSQALHPPPRQTPTPPTTQLPQ 895
Query: 339 ALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAG--GQLSQGSNLSINTNQNISIKSEP 396
+Q P + + QQ Q + ++ V L + + +SI+ +
Sbjct: 896 QVQ----PSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQV 951
Query: 397 ISPPRDRMTPSGFQ---QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSS 453
+PP T Q ++Q Q+ + QP+P QP +++ S V+ S+
Sbjct: 952 SNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPADTQP-EDISESKVEDCKMEST 1010
Query: 454 SYDGSDRE 461
+ E
Sbjct: 1011 ETEERSTE 1018
Score = 32.7 bits (73), Expect = 0.78
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 396 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP 436
P P TP+G QQ Q P P QPQP PP P
Sbjct: 1848 PSPTPATPTTPTG----QQPTTPQTPQPTSQPQPTPPNSMP 1884
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 49.3 bits (116), Expect = 8e-06
Identities = 80/364 (21%), Positives = 135/364 (37%), Gaps = 43/364 (11%)
Query: 133 LPPQNFSMSVTVPVTSPNAL-SYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSP 191
+ P S++ T P SP + S T+P + ++++LT + TL R
Sbjct: 168 MTPSTASLTRTPPRASPTGMPSRTSP------TGMPSTASLTKMDSTASITRTLSRASPT 221
Query: 192 GAPQRPPSTGNAG----GMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGK 247
G P R TG+ M+ +T L + +SP G + SR S + +T + +
Sbjct: 222 GTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTG---MLSRTSLTKMDSTASITRTP 278
Query: 248 VMPTKSPPP--PGGGNLGMNSRKPDLRVVIPPSSK-GMMPPLNTQRISSSQATQPLATPV 304
P+ + P P +L M L ++P +S GM+ + ++ S+ A+ P
Sbjct: 279 SRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDST-ASISRTPPR 337
Query: 305 VSVT-TPS-LPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHL 362
S+T TPS P G +A PT + S T SP SL +S
Sbjct: 338 ASITRTPSRASPTGKPSTASPTGTPSRASPTG----------SPSTASLTGLS------- 380
Query: 363 GQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPP 422
S+ G + S + +++ K P + P ++ + + + P
Sbjct: 381 -----STASPTGTPPRASPTGTPSTASLTRKP-PRASPTGMLSRTSITKMDSTASPTRTP 434
Query: 423 PPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDR 482
P P PP+ P R+ S++S P G + G P
Sbjct: 435 PRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLT 494
Query: 483 ESPS 486
+PS
Sbjct: 495 RTPS 498
Score = 33.5 bits (75), Expect = 0.46
Identities = 59/216 (27%), Positives = 76/216 (35%), Gaps = 30/216 (13%)
Query: 129 GPPGLPPQNFSMSVTVPVTSPNALSYTNPGS--SLVSPSLAASSTLTDS--------SML 178
G P S S P SP+ S T S SL AS T T S S
Sbjct: 468 GSPSTASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTA 527
Query: 179 SP---PQTTLHR-NVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASP 234
SP P T L + S A R PS + S LT P+ A + + + +R P
Sbjct: 528 SPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPP 587
Query: 235 NLIGATGANSLGKVMPTKSPPP--PGGGNLGMNSRKPDLRVVIPPSSKGMMP----PLNT 288
+ TG MP+++ P P L + P +S P P T
Sbjct: 588 S-ASPTG-------MPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGT 639
Query: 289 QRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPT 324
+S T P A+P + T P P G A PT
Sbjct: 640 PPRASPTGTPPRASP--TGTPPRASPTGTPSRASPT 673
Score = 30.8 bits (68), Expect = 3.0
Identities = 51/213 (23%), Positives = 75/213 (35%), Gaps = 30/213 (14%)
Query: 131 PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVS 190
P P S + T P SP + S + S T S SP + + S
Sbjct: 430 PTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPS 489
Query: 191 PGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP 250
+ R PS + M ST +T +P SRASP +T + P
Sbjct: 490 RASLTRTPSRASLTKMESTASIT------RTP-------SRASPTWTPSTAS-------P 529
Query: 251 TKSPPPP---GGGNLGMNSRKPD-LRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVS 306
T SP G + +R P + PS + P S + T+ +T +++
Sbjct: 530 TGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTP------SRASLTRTPSTVLLT 583
Query: 307 VTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSA 339
PS P G+ PT + LT D +A
Sbjct: 584 RMPPSASPTGMPSRTSPTGMPSSALLTKMDSTA 616
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,930,926
Number of Sequences: 37866
Number of extensions: 1564977
Number of successful extensions: 28346
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 687
Number of HSP's that attempted gapping in prelim test: 13922
Number of HSP's gapped (non-prelim): 8221
length of query: 497
length of database: 18,247,518
effective HSP length: 106
effective length of query: 391
effective length of database: 14,233,722
effective search space: 5565385302
effective search space used: 5565385302
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.