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Search of human proteins with 195972799
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo
sapiens]
(499 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 1007 0.0
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 936 0.0
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 767 0.0
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 760 0.0
gi|196114945 myocyte enhancer factor 2C isoform 2 [Homo sapiens] 557 e-159
gi|19923215 myocyte enhancer factor 2C isoform 1 [Homo sapiens] 511 e-145
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 483 e-136
gi|239747524 PREDICTED: similar to serum response factor-related... 380 e-105
gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens] 180 3e-45
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 178 9e-45
gi|4507205 serum response factor (c-fos serum response element-b... 63 7e-10
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 57 5e-08
gi|5032187 transducer of ERBB2, 1 [Homo sapiens] 55 2e-07
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 55 2e-07
gi|33286444 mastermind-like 2 [Homo sapiens] 54 3e-07
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 54 3e-07
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 54 3e-07
gi|169636435 caudal type homeobox 2 [Homo sapiens] 52 1e-06
gi|90903231 huntingtin [Homo sapiens] 52 1e-06
gi|55750053 atrophin-1 [Homo sapiens] 52 1e-06
gi|55750041 atrophin-1 [Homo sapiens] 52 1e-06
gi|56549696 E1A binding protein p400 [Homo sapiens] 50 4e-06
gi|110347429 mediator complex subunit 12 [Homo sapiens] 50 4e-06
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 50 6e-06
gi|50345997 E1A binding protein p300 [Homo sapiens] 49 8e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 49 8e-06
gi|116284392 mucin 2 precursor [Homo sapiens] 49 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 49 1e-05
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 1007 bits (2604), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
Query: 121 EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 180
EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML
Sbjct: 121 EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 180
Query: 181 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 240
SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG
Sbjct: 181 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 240
Query: 241 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 300
ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ
Sbjct: 241 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 300
Query: 301 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 360
PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ
Sbjct: 301 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 360
Query: 361 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 420
QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ
Sbjct: 361 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 420
Query: 421 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 480
QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN
Sbjct: 421 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 480
Query: 481 TEDRESPSVKRMRMDAWVT 499
TEDRESPSVKRMRMDAWVT
Sbjct: 481 TEDRESPSVKRMRMDAWVT 499
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 936 bits (2419), Expect = 0.0
Identities = 468/499 (93%), Positives = 479/499 (95%), Gaps = 2/499 (0%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
DMDKVLLKYTEYNEPHESRTNSDIVE L KK GC+SPD D + +P +E+++ K+NE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120
Query: 121 EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 180
+ D + + PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML
Sbjct: 121 DSDFIFKRGP--PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 178
Query: 181 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 240
SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG
Sbjct: 179 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 238
Query: 241 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 300
ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ
Sbjct: 239 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ 298
Query: 301 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 360
PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ
Sbjct: 299 PLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQ 358
Query: 361 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 420
QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ
Sbjct: 359 QHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQ 418
Query: 421 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 480
QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN
Sbjct: 419 QQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPN 478
Query: 481 TEDRESPSVKRMRMDAWVT 499
TEDRESPSVKRMRMDAWVT
Sbjct: 479 TEDRESPSVKRMRMDAWVT 497
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 767 bits (1981), Expect = 0.0
Identities = 382/414 (92%), Positives = 394/414 (95%), Gaps = 2/414 (0%)
Query: 86 EALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVT 145
+ L KK GC+SPD D + +P +E+++ K+NE+ D + + PGLPPQNFSMSVT
Sbjct: 18 QTLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGP--PGLPPQNFSMSVT 75
Query: 146 VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 205
VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA
Sbjct: 76 VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 135
Query: 206 GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 265
GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG
Sbjct: 136 GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 195
Query: 266 MNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMP 325
MNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMP
Sbjct: 196 MNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMP 255
Query: 326 TAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLS 385
TAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLS
Sbjct: 256 TAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLS 315
Query: 386 INTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRS 445
INTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRS
Sbjct: 316 INTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRS 375
Query: 446 PVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 499
PVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT
Sbjct: 376 PVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAWVT 429
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 760 bits (1962), Expect = 0.0
Identities = 382/422 (90%), Positives = 394/422 (93%), Gaps = 10/422 (2%)
Query: 86 EALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVT 145
+ L KK GC+SPD D + +P +E+++ K+NE+ D + + PGLPPQNFSMSVT
Sbjct: 18 QTLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRGP--PGLPPQNFSMSVT 75
Query: 146 VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 205
VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA
Sbjct: 76 VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 135
Query: 206 GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 265
GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG
Sbjct: 136 GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 195
Query: 266 MNSRKPDLRVVIPPSSKGMMPPL--------NTQRISSSQATQPLATPVVSVTTPSLPPQ 317
MNSRKPDLRVVIPPSSKGMMPPL NTQRISSSQATQPLATPVVSVTTPSLPPQ
Sbjct: 196 MNSRKPDLRVVIPPSSKGMMPPLSEEEELELNTQRISSSQATQPLATPVVSVTTPSLPPQ 255
Query: 318 GLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQ 377
GLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQ
Sbjct: 256 GLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQ 315
Query: 378 LSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQ 437
LSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQ
Sbjct: 316 LSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQ 375
Query: 438 PRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAW 497
PRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAW
Sbjct: 376 PRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKRMRMDAW 435
Query: 498 VT 499
VT
Sbjct: 436 VT 437
>gi|196114945 myocyte enhancer factor 2C isoform 2 [Homo sapiens]
Length = 463
Score = 557 bits (1435), Expect = e-159
Identities = 318/508 (62%), Positives = 371/508 (73%), Gaps = 54/508 (10%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+NKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
DMDKVLLKYTEYNEPHESRTNSDIVEALNKKE++GC+SPDPD+SY LTP TEEKYKKINE
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINE 120
Query: 121 EFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML 180
EFDNM+++HKI P +PP NF M V++PV+S N+L Y+NP SSL +P+L L
Sbjct: 121 EFDNMIKSHKI-PAVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNL-----------L 168
Query: 181 SPPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLI 239
+L RN +SPG RPPS GN GG++ DLT +GAG+S GNG+ N R SP L+
Sbjct: 169 PLAHPSLQRNSMSPGVTHRPPSAGNTGGLMG-GDLT--SGAGTS-AGNGYGNPRNSPGLL 224
Query: 240 GATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQAT 299
+ G +L K M KSPPP NLGMN+RKPDLRV+IPP SK MP +N QRI++SQ+
Sbjct: 225 VSPG--NLNKNMQAKSPPPM---NLGMNNRKPDLRVLIPPGSKNTMPSVN-QRINNSQSA 278
Query: 300 QPLATPVVSVTTPSLPPQGL--VYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVS 357
Q LATPVVSV TP+LP QG+ SA+ T Y T+YSL+SADLS+L GFN+ L LG V+
Sbjct: 279 QSLATPVVSVATPTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGFNTASALHLGSVT 338
Query: 358 AWQQHHLGQ---AALSSLVA--GGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 412
WQQ HL +ALS L A LSQ SNLS+ + Q+++IKSEP+SPPRDR T
Sbjct: 339 GWQQQHLHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPRDRTT----- 393
Query: 413 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSP 472
P PQ R E GRSPVDSLSS SSSYDGSDRED R +FHSP
Sbjct: 394 -------------TPSRYPQ----HTRHEAGRSPVDSLSSCSSSYDGSDREDHRNEFHSP 436
Query: 473 IVLGRPPNTEDRESPSVKRMRM-DAWVT 499
I L R P+ ++RESPSVKRMR+ + W T
Sbjct: 437 IGLTR-PSPDERESPSVKRMRLSEGWAT 463
>gi|19923215 myocyte enhancer factor 2C isoform 1 [Homo sapiens]
Length = 473
Score = 511 bits (1317), Expect = e-145
Identities = 302/517 (58%), Positives = 357/517 (69%), Gaps = 62/517 (11%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+NKLFQYAST
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDT--SYVLTPHTEEKYKKI 118
DMDKVLLKYTEYNEPHESRTNSDIVE L KK GCDSPDPD S +P +E+KY+KI
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI 120
Query: 119 NEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSS 178
NE+ D M+ ++ +PP NF M V++PV+S N+L Y+NP SSL +P+L
Sbjct: 121 NEDIDLMISRQRLC-AVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNL---------- 169
Query: 179 MLSPPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPN 237
L +L RN +SPG RPPS GN GG++ DLT +GAG+S GNG+ N R SP
Sbjct: 170 -LPLAHPSLQRNSMSPGVTHRPPSAGNTGGLMG-GDLT--SGAGTS-AGNGYGNPRNSPG 224
Query: 238 LIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLN-------T 290
L+ + G +L K M KSPPP NLGMN+RKPDLRV+IPP SK MP ++
Sbjct: 225 LLVSPG--NLNKNMQAKSPPPM---NLGMNNRKPDLRVLIPPGSKNTMPSVSEDVDLLLN 279
Query: 291 QRISSSQATQPLATPVVSVTTPSLPPQGL--VYSAMPTAYNTDYSLTSADLSALQGFNSP 348
QRI++SQ+ Q LATPVVSV TP+LP QG+ SA+ T Y T+YSL+SADLS+L GFN+
Sbjct: 280 QRINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTTYGTEYSLSSADLSSLSGFNTA 339
Query: 349 GMLSLGQVSAWQQHHLGQ---AALSSLVA--GGQLSQGSNLSINTNQNISIKSEPISPPR 403
L LG V+ WQQ HL +ALS L A LSQ SNLS+ + Q+++IKSEP+SPPR
Sbjct: 340 SALHLGSVTGWQQQHLHNMPPSALSQLGACTSTHLSQSSNLSLPSTQSLNIKSEPVSPPR 399
Query: 404 DRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDRE 463
DR T P PQ R E GRSPVDSLSS SSSYDGSDRE
Sbjct: 400 DRTT------------------TPSRYPQ----HTRHEAGRSPVDSLSSCSSSYDGSDRE 437
Query: 464 DPRGDFHSPIVLGRPPNTEDRESPSVKRMRM-DAWVT 499
D R +FHSPI L R P+ ++RESPSVKRMR+ + W T
Sbjct: 438 DHRNEFHSPIGLTR-PSPDERESPSVKRMRLSEGWAT 473
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 483 bits (1243), Expect = e-136
Identities = 287/549 (52%), Positives = 342/549 (62%), Gaps = 83/549 (15%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI RI DERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN SNKLFQYAST
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPD--TSYVLTPHTEEKYKKI 118
DMDKVLLKYTEYNEPHESRTN+DI+E L KK GCDSP+PD S +P E+KY++
Sbjct: 61 DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRA 120
Query: 119 NEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSS 178
+EE D + R + +P NF+M VTVPV++ ++L ++NP SLV+PSL SS LTD
Sbjct: 121 SEELDGLFRRY--GSTVPAPNFAMPVTVPVSNQSSLQFSNPSGSLVTPSLVTSS-LTDPR 177
Query: 179 MLSPPQTTLHRN-VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPN 237
+LSP Q L RN VSPG PQRP S AG ML DL NGA SPVGNG+V++RASP
Sbjct: 178 LLSPQQPALQRNSVSPGLPQRPAS---AGAMLG-GDLNSANGACPSPVGNGYVSARASPG 233
Query: 238 LIGATGANSLGKVMPTKSPPPP-GGGNLGMNSRKPDLRVVIPPSSKGMMPPL-------- 288
L+ NSL KV+P KSPPPP LG SRKPDLRV+ + KG+M L
Sbjct: 234 LLPVANGNSLNKVIPAKSPPPPTHSTQLGAPSRKPDLRVITSQAGKGLMHHLTEDHLDLN 293
Query: 289 NTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSP 348
N QR+ SQ+T L TPVVSV TPSL QGL +S+MPTAYNTDY LTSA+LS+L F+SP
Sbjct: 294 NAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTSAELSSLPAFSSP 353
Query: 349 GMLSLGQVSAW--------------------------------------QQHHLGQAALS 370
G LSLG V+AW QQ HL +LS
Sbjct: 354 GGLSLGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVSLS 413
Query: 371 SLVAGGQLSQ-GSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQP 429
+L+ G L G+ L++ T+ +ISIKSEP+SP R+R P PPP
Sbjct: 414 NLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRER----------------SPAPPPPA 457
Query: 430 QPQPPQPQPRQEMGRSPVDSLSS-SSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPS 488
+P+P D LSS + SY+ DR+D RGDF + L RP + E +
Sbjct: 458 VFPAARPEPG--------DGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEAEGSA 509
Query: 489 VKRMRMDAW 497
VKRMR+D W
Sbjct: 510 VKRMRLDTW 518
>gi|239747524 PREDICTED: similar to serum response factor-related
protein C4 [Homo sapiens]
Length = 434
Score = 380 bits (976), Expect = e-105
Identities = 188/205 (91%), Positives = 191/205 (93%)
Query: 84 IVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMS 143
IVEALNKKEHRGCDS DPDTS VLTP+TEEKYKKINEEFDNMM+NH IAPGLPPQNFSMS
Sbjct: 202 IVEALNKKEHRGCDSSDPDTSCVLTPYTEEKYKKINEEFDNMMQNHNIAPGLPPQNFSMS 261
Query: 144 VTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTG 203
VTVPV SPNALSYTNPGSSLVSPSLAASSTLTD + LSPPQT LHRNVSPGAPQRPPSTG
Sbjct: 262 VTVPVKSPNALSYTNPGSSLVSPSLAASSTLTDLNTLSPPQTILHRNVSPGAPQRPPSTG 321
Query: 204 NAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGN 263
NAGGML TTDLTVPNG GSSPVGN FVNSRASPNLIGATGANSLGKVMPTKSPPPPGG N
Sbjct: 322 NAGGMLGTTDLTVPNGTGSSPVGNEFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGSN 381
Query: 264 LGMNSRKPDLRVVIPPSSKGMMPPL 288
LGMNS KPDLRVVIP SSKGM PPL
Sbjct: 382 LGMNSGKPDLRVVIPASSKGMTPPL 406
>gi|224809412 myocyte enhancer factor 2B isoform a [Homo sapiens]
Length = 368
Score = 180 bits (456), Expect = 3e-45
Identities = 123/294 (41%), Positives = 159/294 (54%), Gaps = 29/294 (9%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI+RI+D+RNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+N+LFQYAST
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSP--DPDTSYVLTPHTEEKYKKI 118
DMD+VLLKYTEY+EPHESRTN+DI+E L K+ G D P +PD EK++++
Sbjct: 61 DMDRVLLKYTEYSEPHESRTNTDILETL-KRRGIGLDGPELEPDEG---PEEPGEKFRRL 116
Query: 119 NEEFDN----MMRNHKIAPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASST 173
E + R + AP +P P ++ P P+ L P S SP A+
Sbjct: 117 AGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPK 176
Query: 174 LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSR 233
++ P + H P P+ G + P G + P G G SR
Sbjct: 177 AGPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDL--------PGGL-AGPRG-GLNTSR 226
Query: 234 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPP 287
+ + L T +P PP G + P+ + PP G++ P
Sbjct: 227 SL--------YSGLQNPCSTATPGPPLGSFPFLPGGPPEYGLGDPPPPPGLLQP 272
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 178 bits (452), Expect = 9e-45
Identities = 130/324 (40%), Positives = 171/324 (52%), Gaps = 30/324 (9%)
Query: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60
MGRKKIQI+RI+D+RNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNS+N+LFQYAST
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYAST 60
Query: 61 DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSP--DPDTSYVLTPHTEEKYKKI 118
DMD+VLLKYTEY+EPHESRTN+DI+E L K+ G D P +PD EK++++
Sbjct: 61 DMDRVLLKYTEYSEPHESRTNTDILETL-KRRGIGLDGPELEPDEG---PEEPGEKFRRL 116
Query: 119 NEEFDN----MMRNHKIAPGLP-PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASST 173
E + R + AP +P P ++ P P+ L P S SP A+
Sbjct: 117 AGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPK 176
Query: 174 LTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGA--GSSPVGNGFVN 231
++ P + H P P+ G + L P G S + +G N
Sbjct: 177 AGPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDL--PGGLAGPRGGLNTSRSLYSGLQN 234
Query: 232 SRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQ 291
++ AT LG P PGG +G + R V P++ PP +
Sbjct: 235 PCST-----ATPGPPLGSF-----PFLPGGPPVGAEAW---ARRVPQPAAPPRRPPQSAS 281
Query: 292 RISSSQATQPLATPVVSVTTPSLP 315
+S+S +P P + +P
Sbjct: 282 SLSAS--LRPPGAPATFLRPSPIP 303
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 62.8 bits (151), Expect = 7e-10
Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 40/337 (11%)
Query: 2 GRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTD 61
GR KI++ I ++ R TF+KRK G+MKKAYELS L ++ L++ + + ++ +A+
Sbjct: 142 GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRK 201
Query: 62 MDKVLLKYTEYNEPHESRTNSDIVE-ALNKKEHRGCDSPDPDTSYVLTPHTE-EKYKKIN 119
+ ++ S T +++ LN + P D T E + +++
Sbjct: 202 LQPMI----------TSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVS 251
Query: 120 EEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPN---ALSYTNPGSSLVSPSLAASSTLTD 176
E + + P N + + T+P+ + ++ S ++ LA S
Sbjct: 252 ESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPITNYLAPVSASVS 311
Query: 177 SSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVN----- 231
S +S T+ ++ G P S+G L T+ +P GA + V +
Sbjct: 312 PSAVSSANGTVLKSTGSG----PVSSGGL-MQLPTSFTLMPGGAVAQQVPVQAIQVHQAP 366
Query: 232 SRASPNLIGAT--------GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKG 283
+ASP+ +T G +L + T S P GG++ S + G
Sbjct: 367 QQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLGDG 426
Query: 284 MMPPLN-------TQRISSSQATQPLATPVVSVTTPS 313
+ LN T ++S SQ +P P V +T S
Sbjct: 427 SLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVFLTASS 463
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 56.6 bits (135), Expect = 5e-08
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 34/204 (16%)
Query: 134 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 181
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 3945 GTPPSLITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 4004
Query: 182 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPN-GAGSSPVGNGFVNSR 233
PP TT R++SP +P R T G L TT +T P+ G +P
Sbjct: 4005 PPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQH 4064
Query: 234 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 293
++P L ++ T+SPP PG G + PS R
Sbjct: 4065 STPALSSPHPSS-----RTTESPPSPGTTTPGHTTATSRTTATATPSK---------TRT 4110
Query: 294 SSSQATQPLATPVVSVTTPSLPPQ 317
S+ + P + P+ +V T PQ
Sbjct: 4111 STLLPSSPTSAPITTVVTTGCEPQ 4134
Score = 54.7 bits (130), Expect = 2e-07
Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 134 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 181
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 2688 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 2747
Query: 182 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPN-GAGSSPVGNGFVNSR 233
PP TT R++SP +P R T G L TT +T P+ G +P
Sbjct: 2748 PPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQH 2807
Query: 234 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 293
++P L ++ T+SPP PG G PS R
Sbjct: 2808 STPALSSPHPSS-----RTTESPPSPGTTTPGHTRATSRTTATATPSK---------TRT 2853
Query: 294 SSSQATQPLATPVVSVTTPSLPPQ 317
S+ + P + P+ +V T PQ
Sbjct: 2854 STLLPSSPTSAPITTVVTMGCEPQ 2877
Score = 52.0 bits (123), Expect = 1e-06
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 134 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 181
G PP + + T+ T + PG++ + P L A SST+T SS L +
Sbjct: 3388 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHT 3447
Query: 182 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPNGAGS-SPVGNGFVNSR 233
PP TT R++ P +P R T G+L TT +T P+ S +P
Sbjct: 3448 PPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQH 3507
Query: 234 ASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 293
++P L ++ T+SPP PG G PS R
Sbjct: 3508 STPALSSPHPSS-----RTTESPPSPGTTTPGHTRGTSRTTATATPSK---------TRT 3553
Query: 294 SSSQATQPLATPVVSVTTPSLPPQ 317
S+ + P + P+ +V T PQ
Sbjct: 3554 STLLPSSPTSAPITTVVTTGCEPQ 3577
Score = 50.4 bits (119), Expect = 4e-06
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 134 GLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL--------AASSTLTDSSML----S 181
G PP + + T+ T + PG++ + P L A S+T+T SS L +
Sbjct: 2131 GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSSALGTTHT 2190
Query: 182 PP-----QTTLHRNVSPGAPQ--RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRA 234
PP TT R++ P +P R T G+L TT +T P+ S + ++
Sbjct: 2191 PPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQH 2250
Query: 235 SPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRIS 294
S + + +S T+SPP PG G + PS R S
Sbjct: 2251 STPALSSPHPSS----RTTESPPSPGTTTPGHTTATSRTTATATPSK---------TRTS 2297
Query: 295 SSQATQPLATPVVSVTTPSLPPQ 317
+ + P + P+ +V T PQ
Sbjct: 2298 TLLPSSPTSAPITTVVTMGCEPQ 2320
Score = 40.8 bits (94), Expect = 0.003
Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 49/226 (21%)
Query: 139 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 198
N+ + P TS A+ + PG++ + L ++T T+S+ G+
Sbjct: 2413 NYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTEST---------------GSTAT 2457
Query: 199 PPSTGNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 254
P ST +L +T +TVP G+ ++ + T + K P
Sbjct: 2458 PSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS 2517
Query: 255 SPPPPGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLA 303
SP G + P LR IP SS L T SQ T P A
Sbjct: 2518 SP--------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTA 2563
Query: 304 TPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 349
T +S TPS P+ + S T T + T A S ++PG
Sbjct: 2564 T--MSTATPSSTPETVHTS---TVLTTTATTTGATGSVATPSSTPG 2604
Score = 40.8 bits (94), Expect = 0.003
Identities = 58/247 (23%), Positives = 90/247 (36%), Gaps = 20/247 (8%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVP-VTSPNALSY 156
S P T+++LT + + + + G P + S + T P VTS A +
Sbjct: 3716 SSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTP--HVSTTATTPTVTSSKATPF 3773
Query: 157 TNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLHRNVSPGA------PQRPPST 202
++PG++ P+L A S T SS L T L + +P A P P T
Sbjct: 3774 SSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPET 3833
Query: 203 GNAGGMLSTTDLTV-PNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGG 261
+ +L+TT T G+ ++P TG P + PP
Sbjct: 3834 AHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVW 3893
Query: 262 GNLGMNSRKPDLRVVIPPSSKGMM-PPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLV 320
+ + V P S G P +++ AT +ATP S T PP +
Sbjct: 3894 IST-TTTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLIT 3952
Query: 321 YSAMPTA 327
+ TA
Sbjct: 3953 TATTITA 3959
Score = 40.4 bits (93), Expect = 0.004
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 29/269 (10%)
Query: 98 SPDPDTSYVLT-PHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVP-VTSPNALS 155
S P T+++LT P T + AP PP+ + + T P VTS A
Sbjct: 1901 SSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAP--PPKVLTTTATTPTVTSSKATP 1958
Query: 156 YTNPGSSLVSPSLAASSTLTDSSMLSP-PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDL 214
++PG++ P+L +++T ++ ++P P ++L + + +T M + T
Sbjct: 1959 SSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWT----RLSQTTTPTATMSTATPS 2014
Query: 215 TVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLR 274
+ P A +S V + + + AT +++ G TK P G S P
Sbjct: 2015 STPETAHTSTVLTATATTTGATGSV-ATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTA 2073
Query: 275 VVIP--------PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTP------SLPPQGLV 320
+ P P+++G +T SS T AT + + TT + P
Sbjct: 2074 LTPPVWISTTTTPTTRG-----STVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQ 2128
Query: 321 YSAMPTAYNTDYSLTSADLSALQGFNSPG 349
S P + T + +A S ++PG
Sbjct: 2129 TSGTPPSLTTTATTITATGSTTNPSSTPG 2157
Score = 38.5 bits (88), Expect = 0.014
Identities = 58/240 (24%), Positives = 89/240 (37%), Gaps = 28/240 (11%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVP-VTSPNALSY 156
S P T+++LT + + + + G P + S + T P VTS A +
Sbjct: 2459 SSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTP--HVSTTATTPTVTSSKATPF 2516
Query: 157 TNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLHRNVSPGA------PQRPPST 202
++PG++ P+L A S T SS L T L + +P A P P T
Sbjct: 2517 SSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPET 2576
Query: 203 GNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGG 262
+ +L+TT T GS + + + ++ T T S P
Sbjct: 2577 VHTSTVLTTT-ATTTGATGSVATPSSTPGTAHTTKVLTTTTTG----FTATPSSSPGTAR 2631
Query: 263 NLGM---NSRKPDLR--VVIPPSSKGMM-PPLNTQRISSSQATQPLATPVVSVTTPSLPP 316
L + + P R V P S G P +++ AT +ATP S T PP
Sbjct: 2632 TLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPP 2691
Score = 38.5 bits (88), Expect = 0.014
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 49/226 (21%)
Query: 139 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 198
N+ + P TS A + PG++ + L ++T T+S+ G+
Sbjct: 3670 NYGHCPSTPATSSTATPSSTPGTTWILTKLTTTATTTEST---------------GSTAT 3714
Query: 199 PPSTGNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 254
P ST +L +T +TVP G+ ++ + T + K P
Sbjct: 3715 PSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS 3774
Query: 255 SPPPPGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLA 303
SP G + P LR IP SS L T SQ T P A
Sbjct: 3775 SP--------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTA 3820
Query: 304 TPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 349
T +S TPS P+ S T T + T A S ++PG
Sbjct: 3821 T--MSTATPSSTPETAHTS---TVLTTTATTTRATGSVATPSSTPG 3861
Score = 38.5 bits (88), Expect = 0.014
Identities = 51/210 (24%), Positives = 74/210 (35%), Gaps = 46/210 (21%)
Query: 143 SVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPST 202
+ T T P A + PG++ + L ++T T S G+ P ST
Sbjct: 4402 ATTTAATGPTATPSSTPGTTWILTELTTTATTT---------------ASTGSTATPSST 4446
Query: 203 GNAGGML----STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPP 258
+L +T +TVP G+ ++ + T + K P+ SP
Sbjct: 4447 PGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSP-- 4504
Query: 259 PGGGNLGMNSRKPDLR-----------VVIPPSSKGMMPPLNTQRISSSQATQPLATPVV 307
G + P LR IP SS L T SQ T P AT +
Sbjct: 4505 ------GTATALPALRSTATTPTATSFTAIPSSS------LGTTWTRLSQTTTPTAT--M 4550
Query: 308 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSA 337
S TPS P+ + S + TA T T +
Sbjct: 4551 STATPSSTPETVHTSTVLTATATTTGATGS 4580
Score = 38.1 bits (87), Expect = 0.019
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 143 SVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPP-----QTTLHRNVSPGAPQ 197
SV P ++P ++T + + A+ + + + L+PP TT S P
Sbjct: 3295 SVATPSSTPGT-AHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPS 3353
Query: 198 RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNL------IGATGANSLGKVM 251
P T + +L+TT TV G+ ++P + S P+L I ATG+ +
Sbjct: 3354 SIPGTTHTATVLTTTTTTVATGSMATP-SSSTQTSGTPPSLTTTATTITATGSTTNPSST 3412
Query: 252 PTKSPPPPGGGNLGMNSRKP--DLRVVIPPSSKGM--MPPLNTQRISSSQATQPLATPVV 307
P +P PP L + P V P S+ G PP+ ++ + P ++P
Sbjct: 3413 PGTTPIPP---VLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLPPSSPHT 3469
Query: 308 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS 352
T + G++ + T +T S T A ++ ++P + S
Sbjct: 3470 VRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSS 3514
Score = 37.4 bits (85), Expect = 0.032
Identities = 63/281 (22%), Positives = 97/281 (34%), Gaps = 49/281 (17%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVP-VTSPNALSY 156
S P T+++LT + + + + G P + S + T P VTS A
Sbjct: 4444 SSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTP--HVSTTATTPTVTSSKATPS 4501
Query: 157 TNPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLHRNVSPGA------PQRPPST 202
++PG++ P+L A S T SS L T L + +P A P P T
Sbjct: 4502 SSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPET 4561
Query: 203 GNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGG 262
+ +L+ T T GA S AT +++ G TK P G
Sbjct: 4562 VHTSTVLTATATT--TGATGSV----------------ATPSSTPGTAHTTKVPTTTTTG 4603
Query: 263 NLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATP-------VVSVTTPSL- 314
S P + P P T +S P + P V++ TT ++
Sbjct: 4604 FTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVA 4663
Query: 315 ------PPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 349
P S P + T + +A S ++PG
Sbjct: 4664 TGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPG 4704
Score = 36.2 bits (82), Expect = 0.071
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 146 VPVTSPNALSYT---NPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPST 202
VP T+ + T +PG++L P +++T +P TT + S P P T
Sbjct: 4596 VPTTTTTGFTATPSSSPGTALTPPVWISTTT-------TPTTTTPTTSGSTVTPSSIPGT 4648
Query: 203 GNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGG 262
+ +L+TT TV G+ ++P + S P+L T A ++ T +P
Sbjct: 4649 THTARVLTTTTTTVATGSMATP-SSSTQTSGTPPSL--TTTATTITATGSTTNP------ 4699
Query: 263 NLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYS 322
S P + P + P T ++S ++ AT + +T+ + ++
Sbjct: 4700 -----SSTPGTTPITPVLTSTATTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFT 4754
Query: 323 AMPTA 327
+P++
Sbjct: 4755 PIPSS 4759
Score = 35.8 bits (81), Expect = 0.093
Identities = 62/280 (22%), Positives = 100/280 (35%), Gaps = 51/280 (18%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYT 157
S P T+++LT + + + + G S + T V S A +
Sbjct: 3158 SSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSS 3217
Query: 158 NPGSSLVSPSL--------AASSTLTDSSMLSPPQTTLHRNVSPGA------PQRPPSTG 203
+PG++ P+L A S T SS L T L + +P A P P T
Sbjct: 3218 SPGTATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETV 3277
Query: 204 NAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGN 263
+ +L+TT T +RA+ ++ AT +++ G TK P G
Sbjct: 3278 HTSTVLTTTTTT----------------TRATGSV--ATPSSTPGTAHTTKVPTTTTTGF 3319
Query: 264 LGMNSRKPDLRVVIP--------PSSKGMMPPLNTQRISSSQATQPLATPVVSVTTP--- 312
S P + P P+++G +T SS T AT + + TT
Sbjct: 3320 TATPSSSPGTALTPPVWISTTTTPTTRG-----STVTPSSIPGTTHTATVLTTTTTTVAT 3374
Query: 313 ---SLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 349
+ P S P + T + +A S ++PG
Sbjct: 3375 GSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPG 3414
Score = 34.3 bits (77), Expect = 0.27
Identities = 55/215 (25%), Positives = 81/215 (37%), Gaps = 42/215 (19%)
Query: 143 SVTVPVTSPNA------LSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP 196
S++ P ++P L+ ++ P+ SST + +L+ P TT V G+
Sbjct: 3124 SMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGST 3183
Query: 197 QRPPSTGNAGGMLS--TTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTK 254
ST G L T+ T P ++SRA+P+ T A +L + T
Sbjct: 3184 ATASSTRATAGTLKVLTSTATTPT----------VISSRATPSSSPGT-ATALPALRSTA 3232
Query: 255 SPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSL 314
+ P IP SS L T SQ T P AT +S TPS
Sbjct: 3233 TTPTATS------------VTAIPSSS------LGTAWTRLSQTTTPTAT--MSTATPSS 3272
Query: 315 PPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPG 349
P+ + S T T + T A S ++PG
Sbjct: 3273 TPETVHTS---TVLTTTTTTTRATGSVATPSSTPG 3304
Score = 34.3 bits (77), Expect = 0.27
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 23/204 (11%)
Query: 143 SVTVPVTSPNALSYTNPGSSL-----VSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQ 197
SV P ++P T ++ V+PS + + T +S TT + S P
Sbjct: 3852 SVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTT-TTPTTSGSTVTPS 3910
Query: 198 RPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPP 257
P T + +L+TT TV G+ ++P + S P+LI T A ++ T +P
Sbjct: 3911 SVPGTTHTPTVLTTTTTTVATGSMATP-SSSTQTSGTPPSLI--TTATTITATGSTTNPS 3967
Query: 258 PPGGGNLGMNSRKPDLRVVIPP--SSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLP 315
G IPP ++ P + ++ S A TP V TT +
Sbjct: 3968 STPG------------TTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTH 4015
Query: 316 PQGLVYSAMPTAYNTDYSLTSADL 339
+ L S+ T S TS L
Sbjct: 4016 GRSLSPSSPHTVRTAWTSATSGTL 4039
Score = 33.5 bits (75), Expect = 0.46
Identities = 47/223 (21%), Positives = 81/223 (36%), Gaps = 25/223 (11%)
Query: 124 NMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSS--LVSPSLAASSTLTDSSMLS 181
NM N+ + L ++S + P TS A + PG++ L P+ A++T + S +
Sbjct: 1870 NMCFNYNVRV-LCCDDYSHCPSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTAT 1928
Query: 182 PPQ---------------TTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVG 226
P TT S P P T A L +T T P +P+
Sbjct: 1929 PTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRST-ATTPTATSVTPIP 1987
Query: 227 NGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNL---GMNSRKPDLRVVIPPSSKG 283
+ + + + T ++ P+ +P + + V P S+ G
Sbjct: 1988 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPG 2047
Query: 284 MMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPT 326
+T ++ ++ T ATP S T PP + + PT
Sbjct: 2048 ---TAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPT 2087
Score = 33.1 bits (74), Expect = 0.60
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 21/183 (11%)
Query: 145 TVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVS-----------P 193
++P T+ A T +++ + S+A S+ T +S P TT ++ P
Sbjct: 3354 SIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTP 3413
Query: 194 GAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPT 253
G PP + TT T P S+ + + + +P + T A + G+ +P
Sbjct: 3414 GTTPIPP--------VLTTTATTPAATSSTVTPSSALGTTHTPPVPNTT-ATTHGRSLPP 3464
Query: 254 KSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPS 313
SP S + PS+ P T ++ +T L++P S T
Sbjct: 3465 SSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTS-TTQHSTPALSSPHPSSRTTE 3523
Query: 314 LPP 316
PP
Sbjct: 3524 SPP 3526
Score = 33.1 bits (74), Expect = 0.60
Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 139 NFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR 198
N+ + P TS A+ + PG++ + L ++T T S+ S P
Sbjct: 4227 NYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTAST------------GSTATPSS 4274
Query: 199 PPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLG-KVMPTKSPP 257
P T +L T+ T P S + + + ++ +T S V P S
Sbjct: 4275 TPGTAPPPKVL-TSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSST 4333
Query: 258 PPGGGNLGMNSRKPDLRV-VIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPP 316
G L + P + I PSS +T + +++AT AT S +TPS P
Sbjct: 4334 LGTTGTLPEQTTTPVATMSTIHPSS--TPETTHTSTVLTTKATTTRATS--STSTPSSTP 4389
Score = 32.7 bits (73), Expect = 0.79
Identities = 48/181 (26%), Positives = 61/181 (33%), Gaps = 33/181 (18%)
Query: 159 PGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAG--GMLSTTDLTV 216
P + S + SST + +L+ P TT S G+ P ST + TT T
Sbjct: 1889 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATT 1948
Query: 217 PNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVV 276
P S +SP A A PT + P
Sbjct: 1949 PTVTSSK------ATPSSSPGTATALPALRSTATTPTATSVTP----------------- 1985
Query: 277 IPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTS 336
IP SS L T SQ T P AT +S TPS P+ S + TA T T
Sbjct: 1986 IPSSS------LGTTWTRLSQTTTPTAT--MSTATPSSTPETAHTSTVLTATATTTGATG 2037
Query: 337 A 337
+
Sbjct: 2038 S 2038
Score = 31.2 bits (69), Expect = 2.3
Identities = 45/209 (21%), Positives = 74/209 (35%), Gaps = 27/209 (12%)
Query: 144 VTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPP-ST 202
+T T+ S P SS S S +T ++ ++ +T + + +PG PP T
Sbjct: 3922 LTTTTTTVATGSMATPSSS-TQTSGTPPSLITTATTITATGSTTNPSSTPGTTPIPPVLT 3980
Query: 203 GNAGGMLSTTDLTVPNGA----GSSPVGN------GFVNSRASPNLIGATGANSLGKVMP 252
A +T+ P+ A + PV N G S +SP+ + ++ +
Sbjct: 3981 TTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLG 4040
Query: 253 TKSPPPPGGGNL---------------GMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQ 297
T P G ++S P R P S G P +T S +
Sbjct: 4041 TTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTTATSRTT 4100
Query: 298 ATQPLATPVVSVTTPSLPPQGLVYSAMPT 326
AT + S PS P + + + T
Sbjct: 4101 ATATPSKTRTSTLLPSSPTSAPITTVVTT 4129
Score = 30.8 bits (68), Expect = 3.0
Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 31/186 (16%)
Query: 139 NFSMSVTVPVTSPNALSYTNPGSS--LVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP 196
N+ + P TS A + PG++ L + AA++T T S P T PG
Sbjct: 2970 NYGHCPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSST-------PGTA 3022
Query: 197 QRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSP 256
P + T+ T P S + + + ++ +T S T
Sbjct: 3023 PPP--------KVLTSTATTPTATSSKATSSSSPRTATTLPVLTSTATKSTA----TSFT 3070
Query: 257 PPPGGGNLGMNSRKPDLRVVIPPSSKGMMPP------LNTQRISSSQATQPLATPVVSVT 310
P P LG P+ + P ++ + P +T + +++AT AT S++
Sbjct: 3071 PIP-SFTLGTTGTLPE-QTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATS--SMS 3126
Query: 311 TPSLPP 316
TPS P
Sbjct: 3127 TPSSTP 3132
>gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
Length = 345
Score = 54.7 bits (130), Expect = 2e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 296 SQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADLSALQGFNSPGMLS 352
+Q P++ P SV++ PP G + PT + T+A +A + F S M +
Sbjct: 136 AQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATK-FGSTKMKN 194
Query: 353 LGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 412
G+ ++++ S +++ N N +K + IS + G
Sbjct: 195 SGR-------------------SNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLG 235
Query: 413 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 446
QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 54.7 bits (130), Expect = 2e-07
Identities = 84/358 (23%), Positives = 138/358 (38%), Gaps = 71/358 (19%)
Query: 128 NHKIAPGLPPQNFSMSVTVPVTS-----PNALSYTNPGSSLVSPSLAASSTL-TDSSMLS 181
N +AP P V VP ++ P+A + +SL++P+ +AS L T + ++
Sbjct: 1538 NSTVAPACSP------VLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMA 1591
Query: 182 PPQTTLHRNVSPGAPQRP-----PSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASP 236
PQT + SP P P PS G A +L+++ VP A SS G ++ P
Sbjct: 1592 APQTAILAP-SPAPPLAPLPVLAPSPG-AAPVLASSQTPVPVMAPSSTPGTSLASASPVP 1649
Query: 237 NLIGATGANSLGKVMPTKSPPP-PGGGNLGMNSRKPDLRVVIPPSSKGM---------MP 286
+S ++P P P P + + P L + SS
Sbjct: 1650 APTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQG 1709
Query: 287 PLNTQRISSSQATQPLATPVVSVT-----------TPSLPPQGLVYSAMPTAYNTDYSLT 335
P TQ +S + A+ + TP +++ T SL P + A P ++LT
Sbjct: 1710 PFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLT 1769
Query: 336 SADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAG-----GQLSQGSNLSINTN- 389
A S+ +P + +S LG AA +L SQ S+L ++ +
Sbjct: 1770 LAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASG 1829
Query: 390 -------------------QNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQ 428
++++S P SPP + G + ++QPPPPP+
Sbjct: 1830 AAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGG------PRPRRQPPPPPR 1881
Score = 40.8 bits (94), Expect = 0.003
Identities = 84/330 (25%), Positives = 111/330 (33%), Gaps = 63/330 (19%)
Query: 132 APGLPPQNFSMSVTVPVTSPNALSYTNP---GSSLVSPSLAASSTLTDSSMLSPPQTTLH 188
APG P S + VP + P S P S L SP + S SS+ TTL
Sbjct: 1389 APGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLP 1448
Query: 189 RNVSPGA--PQRPPSTGNAGGMLSTTDLT------VPNGAGSSPVGNGFVNSRASPNLIG 240
S P P T +A G T +T VP G + + AS +G
Sbjct: 1449 APASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLG 1508
Query: 241 ATGANSLGKVMPTKSP---PPPGGGNLGMNSRKPDL--RVVIP--------PSSKGMMPP 287
A SL P P G+NS V++P PS+ P
Sbjct: 1509 LATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPA 1568
Query: 288 LNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNS 347
+ +S A+Q LATP+ P PQ + + P A L L S
Sbjct: 1569 QASLLAPASSASQALATPL----APMAAPQTAILAPSPAP-------PLAPLPVLA--PS 1615
Query: 348 PGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMT 407
PG V A Q + A SS + G++L+ + P+ P +
Sbjct: 1616 PG---AAPVLASSQTPVPVMAPSS-------TPGTSLA---------SASPVPAPTPVLA 1656
Query: 408 PSGFQQQQQQQQQQQPPPPPQPQPQPPQPQ 437
PS Q P P P P P P Q
Sbjct: 1657 PS-------STQTMLPAPVPSPLPSPASTQ 1679
Score = 39.7 bits (91), Expect = 0.006
Identities = 78/358 (21%), Positives = 124/358 (34%), Gaps = 61/358 (17%)
Query: 133 PGLPPQNFSMSVTVPVTSPNALSYTNPG--------------SSLVSPSLAASSTLTDSS 178
P P S +T+P+++P +S + P ++ PSLA S +S
Sbjct: 1444 PTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSAS 1503
Query: 179 MLSPPQTTLHRNVSPGAPQRP----PSTGNAGGMLST-----TDLTVPNGAGSSPVGNGF 229
L+ T S P P P++ + G+ ST + + VP A +SP +
Sbjct: 1504 ALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAP 1563
Query: 230 VNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMP--- 286
+ A +L+ + S P P L + P + + S G P
Sbjct: 1564 NPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLA 1623
Query: 287 ----PLNTQRISSSQATQPLATPVVSVTTPSLPPQGL-------VYSAMPTAYNTDYSLT 335
P+ SS+ T + V TP L P V S +P+ +T
Sbjct: 1624 SSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLAL 1683
Query: 336 SADLSALQGFNSPGM-LSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISI 394
+ L+ G +SP LSLG + Q LS L+ S+L Q +S+
Sbjct: 1684 APALAPTLGGSSPSQTLSLGTGNP--QGPFPTQTLS-------LTPASSLVPTPAQTLSL 1734
Query: 395 KSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSS 452
P P ++ + P PP P P P + +P S +S
Sbjct: 1735 APGPPLGPTQTLSLA--------------PAPPLAPASPVGPAPAHTLTLAPASSSAS 1778
Score = 36.6 bits (83), Expect = 0.054
Identities = 81/361 (22%), Positives = 120/361 (33%), Gaps = 77/361 (21%)
Query: 133 PGLPPQNFSMSVTV---PVTSPNALSYTNPGSSLVSPSLAASSTLTD---------SSML 180
PG PQ S+ V P P + PG L+ P S +L S
Sbjct: 1038 PGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTS 1097
Query: 181 SPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIG 240
PP TL +P AP R G LTVP G P A+
Sbjct: 1098 RPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPP---------AAATTTS 1148
Query: 241 ATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPS---SKGMMPPLNTQRISSSQ 297
T A + +P +P P PD++ +P S G + L + ++++
Sbjct: 1149 TTTATATTTAVPAPTPAPQ------RLILSPDMQARLPSGEVVSIGQLASLAQRPVANAG 1202
Query: 298 ATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS---LG 354
++PL + QG +LT A + L P L +
Sbjct: 1203 GSKPLTFQI----------QG-----------NKLTLTGAQVRQL-AVGQPRPLQRNVVH 1240
Query: 355 QVSAWQQHHL-GQAALSSLVAGGQLSQG------------SNLSINTNQNISIKSEPISP 401
VSA QHHL Q A +L+ + G S T ++ + + + P
Sbjct: 1241 LVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPP 1300
Query: 402 PRDRMTPS-GFQQQQQQQQQQQPPPPPQPQPQPPQ--------PQPRQEMGRSPVDSLSS 452
T +Q + P PP P P+PP P+P GR P +L +
Sbjct: 1301 TMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGT 1360
Query: 453 S 453
+
Sbjct: 1361 A 1361
Score = 30.8 bits (68), Expect = 3.0
Identities = 85/356 (23%), Positives = 123/356 (34%), Gaps = 75/356 (21%)
Query: 133 PGLPPQNFSMSVTVPVTSPNALSYTNP-GSSLVSPSLAASSTLTDSSMLSPPQTTLHRNV 191
PG P + S T P T+P + P ++ V P++ ++ + + P+ L V
Sbjct: 1267 PGPTPVSVLPSST-PSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGL-TPV 1324
Query: 192 SPGAPQ-RPPSTG-----NAGGMLSTTDLTVPN-GAGSSPVGNG--------FVNSRASP 236
P AP RPPS+G N L+ L P G +P+ V+S +
Sbjct: 1325 PPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPE 1384
Query: 237 NLIGATGANSLGKVMPTKSP---PPPGGGNLGMNSRKPDLRVVIPPSSKGMMP-----PL 288
A GA L P P P P + + + P + P SS +P P+
Sbjct: 1385 VSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSP---LASPVSSTVSVPLSSSLPI 1441
Query: 289 NTQRISSSQATQPLATPV-----VSVTTPSL-----PPQGLVYSAMPTAYNTDYSLTSAD 338
+ + A+ PL P+ VS + P+L PP V A P + S S
Sbjct: 1442 SVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPS 1501
Query: 339 LSALQ-GFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSE 397
SAL G + LS Q H L A SS V G N ++
Sbjct: 1502 ASALTLGLATAPSLSSSQTPG---HPLLLAPTSSHVPG------------LNSTVAPACS 1546
Query: 398 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSS 453
P+ P + P P P P P Q +P S S +
Sbjct: 1547 PVLVPASALA--------------------SPFPSAPNPAPAQASLLAPASSASQA 1582
Score = 30.8 bits (68), Expect = 3.0
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 33/206 (16%)
Query: 131 IAPGLP---PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSM----LSP- 182
+APG P Q S++ P+ + + + ++P+ +++S L +S+ LSP
Sbjct: 1734 LAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPA 1793
Query: 183 PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVN----SRASPNL 238
P TL + P ST + S+ V + +G++P+ V+ S+ P+
Sbjct: 1794 PVPTLGPAAAQTLALAPASTQSPASQASSL---VVSASGAAPLPVTMVSRLPVSKDEPDT 1850
Query: 239 IGATG--------ANSLGKVMPTKSPPPPGGGNLGMNS--------RKPDLRVVIPPSSK 282
+ A S G P + PPPP ++S R L + S
Sbjct: 1851 LTLRSGPPSPPSTATSFGGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEA 1910
Query: 283 --GMMPPLNTQRISSSQATQPLATPV 306
+ P T+ + QP+A+P+
Sbjct: 1911 HGALAPVYGTEVLDFCTLPQPVASPI 1936
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 54.3 bits (129), Expect = 3e-07
Identities = 81/331 (24%), Positives = 116/331 (35%), Gaps = 37/331 (11%)
Query: 126 MRNHKIAPGLPPQNFSMSVTVPVTS---PNALSYTNPGSSLVSPSLAASSTLTDSSMLSP 182
+R P N ++S + P+ S A T G+S PS S ++
Sbjct: 382 LRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQLKQIAA 441
Query: 183 PQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGAT 242
+ H + Q P+ +A +P+ AG SP G SP+ T
Sbjct: 442 NRQQ-HARMQQHQQQHQPTNWSA----------LPSSAGPSPGPFG-QEKIPSPSFGQQT 489
Query: 243 GANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPL 302
+ P SP P G G + + PS++G + Q Q L
Sbjct: 490 FS-------PQSSPMPGVAGGSGQSKVMANYMYKAGPSAQG-----GHLDVLMQQKPQDL 537
Query: 303 ATPVVSVTTPSLPP-QGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQ 361
+ ++ P++ P QG + P + S L N P +L Q QQ
Sbjct: 538 SRSFINNPHPAMEPRQG---NTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQ 594
Query: 362 HHLGQAALSSLVAGGQLSQGSNL-----SINTNQNISIKSEPISPPRDRMTPSGFQQQQQ 416
Q Q Q SI+ Q +S IS + + QQQQQ
Sbjct: 595 QQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSS-ISAQQQQQQQQQQQQQQQ 653
Query: 417 QQQQQQPPPPPQPQPQPPQPQPRQEMGRSPV 447
QQQQQQ QP QP Q P Q + RSP+
Sbjct: 654 QQQQQQQQQQQQPSSQPAQSLPSQPLLRSPL 684
Score = 38.9 bits (89), Expect = 0.011
Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 29/267 (10%)
Query: 194 GAPQ-RPPSTGNAGGM----LSTTDL--TVPNGAGSSPVGNGFVNSRASPNLIGATGANS 246
G+PQ RPPS G A M LST+ +VP G+G SRA P+ + A
Sbjct: 378 GSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGA--SRALPSWQEVSHAQQ 435
Query: 247 LGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPV 306
L ++ + + +P +P S+ P ++I S Q +P
Sbjct: 436 LKQIAANRQQHARMQQH--QQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSP- 492
Query: 307 VSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 366
S P G+ + + +Y + A SA G L + + L +
Sbjct: 493 -----QSSPMPGVAGGSGQSKVMANY-MYKAGPSAQGGH-------LDVLMQQKPQDLSR 539
Query: 367 AALSSLVAGGQLSQGSNLSI---NTNQ-NISIKSEPISPPRDRMTPSGFQQQQQQQQQQQ 422
+ +++ + QG+ + N++Q N + S S + + QQQQQQQQQQQ
Sbjct: 540 SFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQ 599
Query: 423 PPPPPQPQPQPPQPQPRQEMGRSPVDS 449
Q Q Q Q Q +Q+ +S + +
Sbjct: 600 QQQQQQQQQQQQQQQQQQQQQQSSISA 626
>gi|196114999 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 412 QQQQQQQQQQQPPPPPQPQPQP---PQPQPRQEMGRSPVDS 449
QQQQQQQQQQQ PPPPQPQ QP P+ PRQ SP +S
Sbjct: 597 QQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAES 637
>gi|4506791 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 412 QQQQQQQQQQQPPPPPQPQPQP---PQPQPRQEMGRSPVDS 449
QQQQQQQQQQQ PPPPQPQ QP P+ PRQ SP +S
Sbjct: 597 QQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAES 637
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 412 QQQQQQQQQQQPPPPPQPQPQPPQPQPRQ-EMGRSPVDSLSSSSSSYDGS 460
+++ QQQQQQQPP PP P PQPPQPQP P+ +SS +S GS
Sbjct: 246 KKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPVSSLQASVPGS 295
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 52.4 bits (124), Expect = 1e-06
Identities = 22/27 (81%), Positives = 22/27 (81%)
Query: 412 QQQQQQQQQQQPPPPPQPQPQPPQPQP 438
QQQQQQQQQQQPPPPP P P P PQP
Sbjct: 30 QQQQQQQQQQQPPPPPPPPPPPQLPQP 56
Score = 50.8 bits (120), Expect = 3e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 393 SIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 441
S+KS + + QQQQQQQQQ PPPPP P PQ PQP P+ +
Sbjct: 13 SLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQ 61
Score = 35.0 bits (79), Expect = 0.16
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 398 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQP------QPPQPQPRQEMGRSPVDSLS 451
P PP P Q Q Q QPPPPP P P + P +P++E+ + D ++
Sbjct: 44 PPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVN 103
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 1e-06
Identities = 95/381 (24%), Positives = 134/381 (35%), Gaps = 54/381 (14%)
Query: 127 RNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL--TDSSMLSPPQ 184
R + PG PP + P P G + A+S++ + PP
Sbjct: 204 RMFQAPPGAPPPH-------PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPP 256
Query: 185 TTLHRNVSPGA----PQRPPSTGNAGGMLS-----------TTDLTVP------NGAGSS 223
TT S GA P +PP+T GG L T +L P N A +S
Sbjct: 257 TTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASAS 316
Query: 224 PVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKG 283
P G G A P +++G+ M P P G L P + P SS
Sbjct: 317 PPGLG-----AQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLA-----PSPHSLPPASSSA 366
Query: 284 MMPPLNTQRISSSQATQPLATPVVSVTTPSLP-PQGLVYSAMPTAYNTDYSLTSADLSAL 342
PP+ SSS ++ ++ S ++ + P P + P ++ SL+ ++
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426
Query: 343 QGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPP 402
+ P SL + W Q L+A G Q S P+S
Sbjct: 427 --YTQP---SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ--STAHPPVSTH 479
Query: 403 RDR-MTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSD 461
QQQQQQQQQQQ P PP P G S + + S GS
Sbjct: 480 HHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSL 539
Query: 462 REDPRGDFHSPIVLGRPPNTE 482
R P G H P PP+++
Sbjct: 540 RPYPPGPAHLP-----PPHSQ 555
Score = 30.8 bits (68), Expect = 3.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 387 NTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 446
N + + SI S P S D + SG Q + PPP P PQPP PRQ
Sbjct: 128 NRSTSPSIYS-PGSVENDSDSSSGLSQGPARPYH--PPPLFPPSPQPPDSTPRQ------ 178
Query: 447 VDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESP 487
+S++ P G +H+P+ PP + ++P
Sbjct: 179 ------PEASFEPHPSVTPTG-YHAPM---EPPTSRMFQAP 209
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 1e-06
Identities = 95/381 (24%), Positives = 134/381 (35%), Gaps = 54/381 (14%)
Query: 127 RNHKIAPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTL--TDSSMLSPPQ 184
R + PG PP + P P G + A+S++ + PP
Sbjct: 204 RMFQAPPGAPPPH-------PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPP 256
Query: 185 TTLHRNVSPGA----PQRPPSTGNAGGMLS-----------TTDLTVP------NGAGSS 223
TT S GA P +PP+T GG L T +L P N A +S
Sbjct: 257 TTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASAS 316
Query: 224 PVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKG 283
P G G A P +++G+ M P P G L P + P SS
Sbjct: 317 PPGLG-----AQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLA-----PSPHSLPPASSSA 366
Query: 284 MMPPLNTQRISSSQATQPLATPVVSVTTPSLP-PQGLVYSAMPTAYNTDYSLTSADLSAL 342
PP+ SSS ++ ++ S ++ + P P + P ++ SL+ ++
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426
Query: 343 QGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPP 402
+ P SL + W Q L+A G Q S P+S
Sbjct: 427 --YTQP---SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ--STAHPPVSTH 479
Query: 403 RDR-MTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSD 461
QQQQQQQQQQQ P PP P G S + + S GS
Sbjct: 480 HHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSL 539
Query: 462 REDPRGDFHSPIVLGRPPNTE 482
R P G H P PP+++
Sbjct: 540 RPYPPGPAHLP-----PPHSQ 555
Score = 30.8 bits (68), Expect = 3.0
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 387 NTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 446
N + + SI S P S D + SG Q + PPP P PQPP PRQ
Sbjct: 128 NRSTSPSIYS-PGSVENDSDSSSGLSQGPARPYH--PPPLFPPSPQPPDSTPRQ------ 178
Query: 447 VDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESP 487
+S++ P G +H+P+ PP + ++P
Sbjct: 179 ------PEASFEPHPSVTPTG-YHAPM---EPPTSRMFQAP 209
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 50.4 bits (119), Expect = 4e-06
Identities = 79/311 (25%), Positives = 109/311 (35%), Gaps = 39/311 (12%)
Query: 159 PGSSLVSPSLAASSTLTDSSMLSP-----PQTTLHRNVSPGAPQRPPSTGNAGGML---- 209
P L P A S + P PQT +P Q +TG + +L
Sbjct: 2520 PPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTI 2579
Query: 210 --STTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMN 267
S T ++P GA S GN VN+ A + A S+ K + SP PG
Sbjct: 2580 KTSVTGTSMPTGAVS---GNVIVNTIAG---VPAATFQSINKRLA--SPVAPGALTTPGG 2631
Query: 268 SRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTA 327
S + PP P T + S TQ + V SVT ++ L T
Sbjct: 2632 SAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRA-VTSVTASAVVTTNL------TP 2684
Query: 328 YNTDYSLTSADLSALQGFNSPG--------MLSLGQVSAWQQHHLGQAALSSLVAGGQLS 379
T +S G PG L Q QQ Q Q
Sbjct: 2685 VQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQ 2744
Query: 380 QGSNLSINTNQNISIKSEPISPPR----DRMTPSGFQQQQQQQQQQQP-PPPPQPQPQPP 434
Q + + Q I+ + SP + ++TP + Q+Q+ Q P PPPPQ Q PP
Sbjct: 2745 QQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPP 2804
Query: 435 QPQPRQEMGRS 445
QP + ++ S
Sbjct: 2805 QPTAQVQVQTS 2815
Score = 40.0 bits (92), Expect = 0.005
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 390 QNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP 438
Q S+++E I+ + + QQ+ QQ PPPPQPQP PP QP
Sbjct: 2476 QVASLRAERIAKEKKALA----DQQKAQQPAVAQPPPPQPQPPPPPQQP 2520
Score = 32.7 bits (73), Expect = 0.79
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 397 EPISPPRDRMTPSGFQQQQQQQQQQQPPPPP-QPQPQP-PQPQPR 439
+P PP + P Q Q Q PP QPQPQP PQ QP+
Sbjct: 2510 QPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQ 2554
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 50.4 bits (119), Expect = 4e-06
Identities = 95/399 (23%), Positives = 138/399 (34%), Gaps = 65/399 (16%)
Query: 88 LNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE-----EFDNMMRNHKIAPGLPPQNFSM 142
L + E + + P D P TEE+ KK + + ++ + PG ++
Sbjct: 1756 LLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPATKTEDYGMGPG---RSGPY 1812
Query: 143 SVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP---PQTTLHRNVSPGAPQRP 199
VTVP P+ L + NPGS S L + P P+ +R V Q+
Sbjct: 1813 GVTVP---PDLLHHPNPGSITHLNYRQGSIGLYTQNQPLPAGGPRVDPYRPVRLPM-QKL 1868
Query: 200 PSTGNAGGMLSTTDLTVPNGAGSS-----------PVGNGFVNSRASPNLIGATGANSLG 248
P+ G+L TT V SS V G + G G +S+
Sbjct: 1869 PTRPTYPGVLPTTMTGVMGLEPSSYKTSVYRQQQPAVPQGQRLRQQLQQSQGMLGQSSVH 1928
Query: 249 KVMPTKSPP-------PPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQP 301
++ P+ S P ++G+ ++PPS Q+T P
Sbjct: 1929 QMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQ----------PYQSTHP 1978
Query: 302 LATPVVSVTTPSLP--PQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLS-LGQVSA 358
P + T L P G V+ PT + LTS + Q M+S + +SA
Sbjct: 1979 STNPTLVDPTRHLQQRPSGYVHQQAPTY---GHGLTSTQRFSHQTLQQTPMISTMTPMSA 2035
Query: 359 W----------------QQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPP 402
QQ Q Q Q I Q I +
Sbjct: 2036 QGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQ 2095
Query: 403 RDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 441
+ + QQQQQQQQQQQ Q Q PPQPQP+ +
Sbjct: 2096 QQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQ 2134
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 137 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 252
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 253 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 311
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 312 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 366
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 255
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 256 PPPPGGGN 263
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.3 bits (77), Expect = 0.27
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL------HR 189
PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSAT 267
Query: 190 NVSPGAPQRPPSTGNAGGMLSTTDLTVPN 218
+ P + PP T A S T P+
Sbjct: 268 TLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 137 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 252
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 253 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 311
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 312 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 366
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 255
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 256 PPPPGGGN 263
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.3 bits (77), Expect = 0.27
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL------HR 189
PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSAT 267
Query: 190 NVSPGAPQRPPSTGNAGGMLSTTDLTVPN 218
+ P + PP T A S T P+
Sbjct: 268 TLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 32/235 (13%)
Query: 137 PQNFSMSVTVP-VTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PQ+ + + P T+P S + P + +P +++T S +PP+TT A
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETT-------AA 214
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 252
P PP+T A P + + P + A+P AT L P
Sbjct: 215 PPTPPATTPA-----------PPSSSAPP------ETTAAPPTPSATTPAPLSSSAPPET 257
Query: 253 TKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 311
T PP P L +S P PP+ P + P+ TP S TT
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 312 PSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQ 366
L P SA PT + T S+T+ + Q ++PG + + + ++ L +
Sbjct: 318 --LAPDTSETSAAPT-HQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNR 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
PP+ + T T+P LS + P + P +++TL SS +PP+TT +P A
Sbjct: 231 PPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA-APPTPSA 289
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKS 255
P + A + +T PN SSP S S T + + TK
Sbjct: 290 TTPAPPSSPAPQETTAAPITTPN---SSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQ 346
Query: 256 PPPPGGGN 263
P G N
Sbjct: 347 PTSAPGQN 354
Score = 34.3 bits (77), Expect = 0.27
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL------HR 189
PP+ + T P T+P S + P + +P +++T S +PP+TT
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSAT 267
Query: 190 NVSPGAPQRPPSTGNAGGMLSTTDLTVPN 218
+ P + PP T A S T P+
Sbjct: 268 TLDPSSASAPPETTAAPPTPSATTPAPPS 296
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 49.3 bits (116), Expect = 8e-06
Identities = 76/308 (24%), Positives = 114/308 (37%), Gaps = 59/308 (19%)
Query: 222 SSPVGNGFVNS--RASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPP 279
SSP+ V S A+P L+ A K S P P G GM +P L+ P
Sbjct: 2062 SSPLQQQQVLSILHANPQLLAAFIKQRAAKY--ANSNPQPIPGQPGMPQGQPGLQPPTMP 2119
Query: 280 SSKGM-----MPPLNTQRISSSQATQPLATPVVSVTTP--SLPPQG----LVYSAMPTAY 328
+G+ M +N + +A P P + P + PQ + ++ MP+ +
Sbjct: 2120 GQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPMGGMSPQAQQMNMNHNTMPSQF 2179
Query: 329 NT----DYSLTSADLSALQGFNSPGMLSLGQVSAWQ------------QHHLGQAALSSL 372
+ PGM + Q Q QHH+ Q ++
Sbjct: 2180 RDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNM 2239
Query: 373 VAGGQLSQG----SNLSINTNQNISIKSE---PISP----PRDRMTPSGFQQQQQQQQQ- 420
GQL Q + S+ Q ++ + P+ P P+ M P+ Q Q QQ
Sbjct: 2240 GQIGQLPQALGAEAGASLQAYQQRLLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQI 2299
Query: 421 ----------QQPPPPPQPQPQPP--QPQPRQEMGRSPVDSLSSSSSSYDG--SDREDP- 465
QP P P+PQ QPP P PR + SP +SS + G + + +P
Sbjct: 2300 PNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPM 2359
Query: 466 -RGDFHSP 472
+G F SP
Sbjct: 2360 EQGHFASP 2367
Score = 34.3 bits (77), Expect = 0.27
Identities = 62/308 (20%), Positives = 109/308 (35%), Gaps = 28/308 (9%)
Query: 165 SPSLAASSTLTDSSMLSPPQTTLHRNVSPGAP-QRPPSTGNAGGMLSTTDLTVPNGAGSS 223
+P L L L+PP R P Q P T ++ T++ + +G +
Sbjct: 730 TPPLQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQA 789
Query: 224 PVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIP---PS 280
PV ++S + P S G + P P L NS P +P P+
Sbjct: 790 PVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPA---LHQNSPSP-----VPSRTPT 841
Query: 281 SKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLS 340
P + Q+ ++ P+ TP P++PP + P T T+
Sbjct: 842 PHHTPPSIGAQQPPATTIPAPVPTP------PAMPPGPQSQALHPPPRQTPTPPTTQLPQ 895
Query: 341 ALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAG--GQLSQGSNLSINTNQNISIKSEP 398
+Q P + + QQ Q + ++ V L + + +SI+ +
Sbjct: 896 QVQ----PSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQV 951
Query: 399 ISPPRDRMTPSGFQ---QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSS 455
+PP T Q ++Q Q+ + QP+P QP +++ S V+ S+
Sbjct: 952 SNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPADTQP-EDISESKVEDCKMEST 1010
Query: 456 SYDGSDRE 463
+ E
Sbjct: 1011 ETEERSTE 1018
Score = 32.7 bits (73), Expect = 0.79
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 398 PISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP 438
P P TP+G QQ Q P P QPQP PP P
Sbjct: 1848 PSPTPATPTTPTG----QQPTTPQTPQPTSQPQPTPPNSMP 1884
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 49.3 bits (116), Expect = 8e-06
Identities = 80/364 (21%), Positives = 135/364 (37%), Gaps = 43/364 (11%)
Query: 135 LPPQNFSMSVTVPVTSPNAL-SYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSP 193
+ P S++ T P SP + S T+P + ++++LT + TL R
Sbjct: 168 MTPSTASLTRTPPRASPTGMPSRTSP------TGMPSTASLTKMDSTASITRTLSRASPT 221
Query: 194 GAPQRPPSTGNAG----GMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGK 249
G P R TG+ M+ +T L + +SP G + SR S + +T + +
Sbjct: 222 GTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTG---MLSRTSLTKMDSTASITRTP 278
Query: 250 VMPTKSPPP--PGGGNLGMNSRKPDLRVVIPPSSK-GMMPPLNTQRISSSQATQPLATPV 306
P+ + P P +L M L ++P +S GM+ + ++ S+ A+ P
Sbjct: 279 SRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDST-ASISRTPPR 337
Query: 307 VSVT-TPS-LPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHL 364
S+T TPS P G +A PT + S T SP SL +S
Sbjct: 338 ASITRTPSRASPTGKPSTASPTGTPSRASPTG----------SPSTASLTGLS------- 380
Query: 365 GQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPP 424
S+ G + S + +++ K P + P ++ + + + P
Sbjct: 381 -----STASPTGTPPRASPTGTPSTASLTRKP-PRASPTGMLSRTSITKMDSTASPTRTP 434
Query: 425 PPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDR 484
P P PP+ P R+ S++S P G + G P
Sbjct: 435 PRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLT 494
Query: 485 ESPS 488
+PS
Sbjct: 495 RTPS 498
Score = 43.5 bits (101), Expect = 4e-04
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 132 APGLPPQNFSMSVTVPVTS-PNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRN 190
+P P S+S+T S L +P L SL + T S +PP+ ++ R
Sbjct: 285 SPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDS-TASISRTPPRASITRT 343
Query: 191 VSPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKV 250
S +P PST + G S +SP G SP+ TG +S
Sbjct: 344 PSRASPTGKPSTASPTGTPSR----------ASPTG--------SPSTASLTGLSSTAS- 384
Query: 251 MPTKSPP---PPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQA---TQPLAT 304
PT +PP P G + +RKP S GM+ + ++ S+ + T P A+
Sbjct: 385 -PTGTPPRASPTGTPSTASLTRKPP-----RASPTGMLSRTSITKMDSTASPTRTPPRAS 438
Query: 305 PVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSA 341
P + T P P G A PT + S T + +A
Sbjct: 439 P--TGTPPRASPTGTPSRASPTGTQSTASPTGSPSTA 473
Score = 31.2 bits (69), Expect = 2.3
Identities = 51/214 (23%), Positives = 76/214 (35%), Gaps = 30/214 (14%)
Query: 132 APGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNV 191
+P P S + T P SP + S + S T S SP + +
Sbjct: 429 SPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSP 488
Query: 192 SPGAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVM 251
S + R PS + M ST +T +P SRASP +T +
Sbjct: 489 SRASLTRTPSRASLTKMESTASIT------RTP-------SRASPTWTPSTAS------- 528
Query: 252 PTKSPPPP---GGGNLGMNSRKPD-LRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVV 307
PT SP G + +R P + PS + P S + T+ +T ++
Sbjct: 529 PTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTP------SRASLTRTPSTVLL 582
Query: 308 SVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSA 341
+ PS P G+ PT + LT D +A
Sbjct: 583 TRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTA 616
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 48.9 bits (115), Expect = 1e-05
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 12/195 (6%)
Query: 135 LPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPG 194
LPP T T+P + +P ++ +++TL ++ SPP TT
Sbjct: 1517 LPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT 1576
Query: 195 APQRPPSTGNAGGMLSTT---DLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVM 251
P P +T + ++TT T P+ ++ + + P T S +
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636
Query: 252 PTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 311
PT +P PP + P PP++ PP+ T + P TP +TT
Sbjct: 1637 PTTTPSPPP----TTTTTPPPTTTPSPPTTTTPSPPITT-----TTTPPPTTTPSSPITT 1687
Query: 312 PSLPPQGLVYSAMPT 326
PP + + PT
Sbjct: 1688 TPSPPTTTMTTPSPT 1702
Score = 45.4 bits (106), Expect = 1e-04
Identities = 49/195 (25%), Positives = 71/195 (36%), Gaps = 24/195 (12%)
Query: 137 PQNFSMSVTVPVTSPN---ALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSP 193
P + + P T+P+ + T P ++ SP ++ ++T ++ SPP TT P
Sbjct: 1424 PPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTT------P 1477
Query: 194 GAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPT 253
P PS +TT T P SP + AS + T S T
Sbjct: 1478 SPPTTTPSPP------TTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPS-PPTTTT 1530
Query: 254 KSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQAT--QPLATPVVSVTT 311
+PPP P + PP+S +PP T + T P TP TT
Sbjct: 1531 TTPPPT------TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTT 1584
Query: 312 PSLPPQGLVYSAMPT 326
PP + PT
Sbjct: 1585 TPSPPTITTTTPPPT 1599
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/185 (23%), Positives = 64/185 (34%), Gaps = 13/185 (7%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSP-PQTTLHRNVSPG 194
P S + T P T+ + T P +PS ++T T +P P TT
Sbjct: 1454 PSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPAS 1513
Query: 195 APQRPPSTGNAGGMLSTT---DLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVM 251
PP+T + +TT T P+ ++P+ + P + +
Sbjct: 1514 TTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1573
Query: 252 PTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTT 311
PT +P PP P + PP + PP T + P TP TT
Sbjct: 1574 PTTTPSPP----TTTTPSPPTITTTTPPPTTTPSPPTTT-----TTTPPPTTTPSPPTTT 1624
Query: 312 PSLPP 316
P PP
Sbjct: 1625 PITPP 1629
Score = 44.7 bits (104), Expect = 2e-04
Identities = 46/207 (22%), Positives = 74/207 (35%), Gaps = 11/207 (5%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
P S T P+T P + + T P ++ SP ++T ++ SPP TT +
Sbjct: 1535 PTTTPSPPTTTPITPPTSTT-TLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITT 1593
Query: 196 PQRPPSTGNAGGMLSTTD---LTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP 252
PP+T + +TT T P+ ++P+ + P + + P
Sbjct: 1594 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1653
Query: 253 TKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQR---ISSSQATQPLATPVVSV 309
T +P PP P PP + P+ T ++ P TP +
Sbjct: 1654 TTTPSPP----TTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPI 1709
Query: 310 TTPSLPPQGLVYSAMPTAYNTDYSLTS 336
TT + P S PT T T+
Sbjct: 1710 TTTTTPSSTTTPSPPPTTMTTPSPTTT 1736
Score = 42.7 bits (99), Expect = 8e-04
Identities = 51/197 (25%), Positives = 68/197 (34%), Gaps = 20/197 (10%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGA 195
P S T P+T P A + T P ++ SP ++T ++ SPP TT P +
Sbjct: 1496 PTTTPSPPTTTPITPP-ASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTT--PITPPTS 1552
Query: 196 PQRPPSTGNAGGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMP--- 252
P T +TT P S P + SP I T P
Sbjct: 1553 TTTLPPTTTPSPPPTTTTTPPPTTTPSPPT-----TTTPSPPTITTTTPPPTTTPSPPTT 1607
Query: 253 -TKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQAT--QPLATPVVSV 309
T +PPP P + PP+S +PP T + T P TP
Sbjct: 1608 TTTTPPPT------TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 310 TTPSLPPQGLVYSAMPT 326
TT PP + PT
Sbjct: 1662 TTTPSPPITTTTTPPPT 1678
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 14/174 (8%)
Query: 147 PVTSPNA-LSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 205
P T+P+ +S T +PS ++ ++ SPP TT P PP+T
Sbjct: 1450 PTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTT-TTPPPTTTPSPPTTTPI 1508
Query: 206 GGMLSTTDL---TVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGG 262
STT L T P+ ++ + + P T S + PT +P PP
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP-- 1566
Query: 263 NLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPP 316
+ P PP++ PP T + P TP TT + PP
Sbjct: 1567 --TTTTTPPPTTTPSPPTTTTPSPPTIT-----TTTPPPTTTPSPPTTTTTTPP 1613
Score = 32.7 bits (73), Expect = 0.79
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 136 PPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSML--SPPQTTLHRNVSP 193
PP S SP + T P S +PS ++T T SS SPP TT+ SP
Sbjct: 1676 PPTTTPSSPITTTPSPPTTTMTTP-SPTTTPSSPITTTTTPSSTTTPSPPPTTM-TTPSP 1733
Query: 194 GAPQRPPSTGNAGGMLSTTDLTVPNGAGSSPV 225
PP +TT T+P SSP+
Sbjct: 1734 TTTPSPP---------TTTMTTLPPTTTSSPL 1756
Score = 31.2 bits (69), Expect = 2.3
Identities = 50/222 (22%), Positives = 74/222 (33%), Gaps = 61/222 (27%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYT 157
+P P T+ +TP T P PP + + P T+P+ + T
Sbjct: 1617 TPSPPTTTPITPPTS-----------TTTLPPTTTPSPPPT--TTTTPPPTTTPSPPTTT 1663
Query: 158 NPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVP 217
P SP + ++T PP TT + P P +T M + + T P
Sbjct: 1664 TP-----SPPITTTTT--------PPPTTTPSSPITTTPSPPTTT-----MTTPSPTTTP 1705
Query: 218 NGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVI 277
SSP+ S + T SPPP M + P
Sbjct: 1706 ----SSPITTTTTPSSTT-----------------TPSPPP-----TTMTTPSPTTTPSP 1739
Query: 278 PPSSKGMMPPLNTQRISSSQATQPLATPVV----SVTTPSLP 315
P ++ +PP T ++ P TP S TTP+ P
Sbjct: 1740 PTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTP 1781
Score = 30.0 bits (66), Expect = 5.1
Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 98 SPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPNALSYT 157
+P P++S TP T E ++ LPP M+ T P ++P A + T
Sbjct: 4213 NPPPESS---TPQTSRSTSSPLTESTTLLST------LPPA-IEMTSTAPPSTPTAPTTT 4262
Query: 158 NPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAGGMLSTTDLTVP 217
+ G +L SP PP TT PG P R +TG++ +T T
Sbjct: 4263 SGGHTL-SP---------------PPSTT---TSPPGTPTRGTTTGSSSAPTPSTVQTTT 4303
Query: 218 NGAGSSPVGNGFVNSRASPNLIGATG 243
A + ++P++I TG
Sbjct: 4304 TSAWTPT-----PTPLSTPSIIRTTG 4324
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 48.9 bits (115), Expect = 1e-05
Identities = 99/394 (25%), Positives = 146/394 (37%), Gaps = 64/394 (16%)
Query: 137 PQNFSMSVTVPVTSPNALSYTN-----PGSSLVSPSLAASSTLTDSSMLSPPQTTLHRN- 190
P N + S T +P +L+ G++L SP + S+ S SPP R+
Sbjct: 2349 PVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSR 2408
Query: 191 VSPGAP-------QRPPSTGNAGGMLSTTDLTVP-NGAGSSPVGNGFVNSRASPNLIGAT 242
P AP +R PS + G + L P SPV + F S S LI T
Sbjct: 2409 TPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAF--SDQSRCLIAQT 2466
Query: 243 ----GANSL--GKVMPTKSPPPPGGGNLGMNSRK-PDLRVVIPPSSKGM--------MPP 287
G+ SL G V T S G L + + P V PP+S G + P
Sbjct: 2467 TPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQP 2526
Query: 288 LNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYS-----AMPT----AYNTDYSLTSAD 338
+R SSS ++ ++ S ++ S G S ++P A S T A
Sbjct: 2527 AKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAP 2586
Query: 339 LSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEP 398
A++ P + ++ SS + S S+ S +++ + S S
Sbjct: 2587 KEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2646
Query: 399 ISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSS-SY 457
SP + P Q P P +PP + R R P+DSL S S SY
Sbjct: 2647 SSPSPAKPGP-------------QALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSY 2693
Query: 458 DGSDREDPRGDFHSPIVLGRPPNTEDRESPSVKR 491
+R P SP P+ D++S S +R
Sbjct: 2694 SPVERRRP-----SP-----QPSPRDQQSSSSER 2717
Score = 43.1 bits (100), Expect = 6e-04
Identities = 86/362 (23%), Positives = 134/362 (37%), Gaps = 72/362 (19%)
Query: 146 VPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNA 205
VP P T P ++L S AAS+ + + P N+ A R P+ A
Sbjct: 2211 VPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNL---ADSRTPAAAAA 2267
Query: 206 GGMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 265
+ S P+ + + + + NL GA +L + T S PP N
Sbjct: 2268 MNLASPRTAVAPSAVN---LADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYP 2324
Query: 266 MNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMP 325
+SR P P+S ++ P S+ AT P+ S T +L P L + M
Sbjct: 2325 SSSRTPQ-----APASANLVGP------RSAHATAPV-NIAGSRTAAALAPASLTSARMA 2372
Query: 326 TAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLS 385
A L+ A+L+ SP + +SA+++ +S + L + +
Sbjct: 2373 PA------LSGANLT------SPRV----PLSAYER-------VSGRTSPPLLDRARS-- 2407
Query: 386 INTNQNISIKSEPISPPRDRMT----PSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQE 441
++ P +P + RMT PS + Q Q PP Q QP+ P P +
Sbjct: 2408 ---------RTPPSAPSQSRMTSERAPSP-SSRMGQAPSQSLLPPAQDQPRSPVPSAFSD 2457
Query: 442 MGR------SPV---DSLSSSSSSYDGSDREDPRGDFHSPIV------LGRPPNTEDRES 486
R +PV SLSS + + S D G P +G PP + +
Sbjct: 2458 QSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQ 2517
Query: 487 PS 488
PS
Sbjct: 2518 PS 2519
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 394 IKSEPISPP------RDRMTPSGFQQQQQQQQQQQPPPPPQP---------QPQPPQPQP 438
+ EP++PP RDR P ++ Q + PP PQP P+ P+P P
Sbjct: 386 LSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAP 445
Query: 439 RQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSP 472
R S +S + S+ + R+ + H+P
Sbjct: 446 APGSHREISSSPTSKNRSHGRAKRD--KSHSHTP 477
Score = 37.0 bits (84), Expect = 0.042
Identities = 98/462 (21%), Positives = 164/462 (35%), Gaps = 64/462 (13%)
Query: 68 KYTEYNEPHESRTNSDIVEALNK---KEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDN 124
K P SR+ S +A ++ + R SP P ++K K + + +
Sbjct: 787 KQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPP----------KQKSKTPSRQSHS 836
Query: 125 MMRNH-KIAPGLPPQNFSMSVTVPVTSPNALS-------YTNPGSSLVS--PSLAASSTL 174
H K+ G PP+ S +T P + +++ ++P L S PS + S
Sbjct: 837 SSSPHPKVKSGTPPRQGS--ITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGS 894
Query: 175 TDSSMLS--PPQTTLHRNVSP--------GAPQRPPSTGNAGGMLSTTDLTVPNGAGS-S 223
+ + S PP+ + R+ SP QR S ++ T T P + S S
Sbjct: 895 SPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVS 954
Query: 224 PVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPP--SS 281
P N V SR P + ++ KV P PP + G S P ++ PP S
Sbjct: 955 PCSN--VESRLLPRYSHSGSSSPDTKVKPET---PPRQSHSGSISPYPKVKAQTPPGPSL 1009
Query: 282 KGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSA 341
G P ++ S + + S P G Y + + S TS D +
Sbjct: 1010 SGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRS 1069
Query: 342 --------LQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAG-------GQLSQGSNLSI 386
SP + S Q S + ++ L + G+ S L
Sbjct: 1070 DTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKS 1129
Query: 387 NTNQNIS-IKSEPISPPR-DRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGR 444
+ S +S+ S P D + G + + + +++ PPQ P+ + +
Sbjct: 1130 GMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFSP 1189
Query: 445 SPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRES 486
PV SS + + R PR + G P T+++ S
Sbjct: 1190 FPVQDRPESSLVFKDTLRTPPRERSGA----GSSPETKEQNS 1227
Score = 33.5 bits (75), Expect = 0.46
Identities = 72/344 (20%), Positives = 123/344 (35%), Gaps = 32/344 (9%)
Query: 133 PGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSL-----AASSTLTDSSMLSPPQTTL 187
P P Q+ S P SP++ P SL+ P+ S +D S QTT
Sbjct: 2411 PSAPSQSRMTSERAP--SPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTP 2468
Query: 188 ---HRNVSPGAPQRPPST-GNAGGMLSTTDLTVPNG-AGSSPVGNGFVNSRASPNLIGA- 241
+++S GA S+ G+ GMLS VP+ G P G A L A
Sbjct: 2469 VAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAK 2528
Query: 242 --------TGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVVIPPSSKGMMPPLNTQRI 293
+ ++S + S G+ +S L V + K + P +
Sbjct: 2529 ERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKE 2588
Query: 294 SSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSL 353
+ + P TP S S+ ++ ++ S +S+ S+ +S S
Sbjct: 2589 AVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 354 GQVSAWQQHHLGQAALSSLVAGGQLSQGSNL----SINTNQNISI------KSEPISPPR 403
+ L + A G+ S S+ ++++S + P PR
Sbjct: 2649 PSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPR 2708
Query: 404 DRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQP-RQEMGRSP 446
D+ + S + ++ Q+ P + + + P P+P R RSP
Sbjct: 2709 DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 32.7 bits (73), Expect = 0.79
Identities = 95/451 (21%), Positives = 160/451 (35%), Gaps = 85/451 (18%)
Query: 52 NKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHT 111
N+L S DM + + T + S + D VE ++ SP D P T
Sbjct: 1361 NQLETDPSLDMKE---QSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDA----VPRT 1413
Query: 112 EEKYKKINEEFDNMMRNHKIAPGLP--PQNFSMSVTVP-------VTSPNALSYTNPGSS 162
+ E + + ++ GLP P S S + P S ++LS ++PG
Sbjct: 1414 PSR------ERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMK 1467
Query: 163 LV--SPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQR-----PPSTGNAGGMLSTTDLT 215
+ +PS S + + PQT R+ SP +P+ P +G S T
Sbjct: 1468 DIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKT 1527
Query: 216 VPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRV 275
V +P+G SR+ G++ V P+ SP + +S+
Sbjct: 1528 VAR----TPLGQ---RSRS--------GSSQELDVKPSASPQERSESDSSPDSKAKTRTP 1572
Query: 276 VIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLT 335
+ S G P ++++ S + ++ ++P V P P+ + +
Sbjct: 1573 LRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVK-DKPRAAPR---------------AQS 1616
Query: 336 SADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIK 395
+D S +P L S SS G +GS+ S +
Sbjct: 1617 GSDSSPEPKAPAPRALPRRSRSG-----------SSSKGRGPSPEGSS---------STE 1656
Query: 396 SEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSS 455
S P PP+ R G + + + + + PP + P+ + + R S+SS
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS----RSASS 1712
Query: 456 SYDGSDREDPRGDFHSPIVLGRPPNTEDRES 486
S + R PR SP V P + R S
Sbjct: 1713 SPETRSRTPPR-HRRSPSVSSPEPAEKSRSS 1742
Score = 31.2 bits (69), Expect = 2.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 147 PVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTL--HRNVSPGAPQRPPSTGN 204
PV P+ S T S SP S+ ++SS SP T + H + SP +P+ P+ G+
Sbjct: 390 PVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGS 449
Score = 30.4 bits (67), Expect = 3.9
Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 23/167 (13%)
Query: 335 TSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQG----SNLSINTNQ 390
TSAD ++ +S S + +A + H A S A G+ +G S + Q
Sbjct: 264 TSADSAS----SSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQ 319
Query: 391 NIS----IKSEPISP----PRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQ-------PPQ 435
S +P SP +D+ S + ++ P PP P P PQ
Sbjct: 320 RPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQ 379
Query: 436 PQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTE 482
P + + PV+ S +S + D S + P S PP+ +
Sbjct: 380 PLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQ 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,795,434
Number of Sequences: 37866
Number of extensions: 1540505
Number of successful extensions: 28345
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 671
Number of HSP's that attempted gapping in prelim test: 14013
Number of HSP's gapped (non-prelim): 8148
length of query: 499
length of database: 18,247,518
effective HSP length: 106
effective length of query: 393
effective length of database: 14,233,722
effective search space: 5593852746
effective search space used: 5593852746
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.