Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 194394172
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194394172 hypothetical protein LOC643338 [Homo sapiens]
(175 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194394172 hypothetical protein LOC643338 [Homo sapiens] 356 7e-99
gi|5802998 Cdc42 effector protein 2 [Homo sapiens] 37 0.009
gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 34 0.057
gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] 34 0.074
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo sap... 32 0.22
gi|92859670 solute carrier family 6 (neurotransmitter transporte... 32 0.28
gi|30089966 CDC42 effector protein 5 [Homo sapiens] 32 0.28
gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens] 31 0.48
gi|146134388 YLP motif containing 1 [Homo sapiens] 31 0.48
gi|30039694 zinc finger protein 598 [Homo sapiens] 31 0.63
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 30 0.82
gi|226437579 NAC alpha domain containing [Homo sapiens] 30 1.1
gi|169213703 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 1.1
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 1.1
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 1.1
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 1.1
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 30 1.1
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 30 1.1
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 30 1.1
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens] 30 1.1
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 30 1.1
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 1.4
gi|239754275 PREDICTED: hypothetical protein [Homo sapiens] 29 2.4
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 29 2.4
gi|239748810 PREDICTED: hypothetical protein XP_002346829 [Homo ... 29 2.4
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 29 2.4
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 29 2.4
>gi|194394172 hypothetical protein LOC643338 [Homo sapiens]
Length = 175
Score = 356 bits (913), Expect = 7e-99
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 METWRKGSFRNASFFKQLSLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPD 60
METWRKGSFRNASFFKQLSLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPD
Sbjct: 1 METWRKGSFRNASFFKQLSLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPD 60
Query: 61 GRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSAL 120
GRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSAL
Sbjct: 61 GRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSAL 120
Query: 121 HQHSEKGLVDTPCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQMLREQFPSEPSF 175
HQHSEKGLVDTPCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQMLREQFPSEPSF
Sbjct: 121 HQHSEKGLVDTPCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQMLREQFPSEPSF 175
>gi|5802998 Cdc42 effector protein 2 [Homo sapiens]
Length = 210
Score = 37.0 bits (84), Expect = 0.009
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 32/118 (27%)
Query: 64 LPLWGDEQPRA--TLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSA-TLPSALSLSSAL 120
LP+ G Q T APPKPPRL+ E+ +P P + +P S +S L
Sbjct: 110 LPVIGGPQALTLPTAQAPPKPPRLHLETP------QPSPQEGGSVDIWRIPETGSPNSGL 163
Query: 121 HQHSEKGLVDTPCFQRTPTPDLSDPF-------LSFKVDLGISLLEEVLQMLREQFPS 171
TP +PF LS VDLG S+L++VLQ++ + S
Sbjct: 164 ----------------TPESGAEEPFLSNASSLLSLHVDLGPSILDDVLQIMDQDLDS 205
>gi|4557669 interleukin 4 receptor alpha chain isoform a precursor
[Homo sapiens]
Length = 825
Score = 34.3 bits (77), Expect = 0.057
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 62 RRLPLWGDEQPRATLLAPPKPPRLYRESSSC---PNILEPPPAY----TAAYSATLPSAL 114
+ P WG EQP +PP P ++ +C P ++ PAY + + P L
Sbjct: 454 KEAPPWGKEQPLHLEPSPPASPTQSPDNLTCTETPLVIAGNPAYRSFSNSLSQSPCPREL 513
Query: 115 SLSSALHQHSEKGLVDTPCFQRTPTPDLSDP 145
L +H E+ + PC P LS+P
Sbjct: 514 GPDPLLARHLEEVEPEMPC-----VPQLSEP 539
>gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]
Length = 346
Score = 33.9 bits (76), Expect = 0.074
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 25/96 (26%)
Query: 41 GDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPP 100
GD EEY E P R L GD++PRA L PP PP L PP
Sbjct: 53 GDEEEYYGSE--------PRARGLA--GDKEPRAGPLPPPAPP------------LPPPG 90
Query: 101 AYTA-AYSATLPSALSLSSA--LHQHSEKGLVDTPC 133
A A + S++L S L Q E+G + +PC
Sbjct: 91 ALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPC 126
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 33.1 bits (74), Expect = 0.13
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 22 RPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPK 81
R ++ RRQ + + A + GG +++ +RE + R DGR+ P W + + RA K
Sbjct: 364 RGKKPRRQKASAAGAKSRGG-----GDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAK 418
Query: 82 P 82
P
Sbjct: 419 P 419
>gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo
sapiens]
Length = 328
Score = 32.3 bits (72), Expect = 0.22
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 53 RELQGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPP-PAYTAAYSATLP 111
R LQ P R P QP + L PP PPR +S ++L P A AA P
Sbjct: 165 RRLQPEPAPRPPPPAASFQPGSALQPPPAPPRRDDSASLRCSVLPPARRAVAAALGKWRP 224
Query: 112 SALSLSSALHQHSEKG 127
S+ SL + E G
Sbjct: 225 SSFSLPPFNLKRRENG 240
>gi|92859670 solute carrier family 6 (neurotransmitter transporter,
glycine), member 5 [Homo sapiens]
Length = 797
Score = 32.0 bits (71), Expect = 0.28
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 56 QGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALS 115
QG PDG P EQ APP PPR+ R +S+ + A +
Sbjct: 23 QGHPDGPCAPRTSPEQELPAAAAPP-PPRVPRSASTGAQTFQSADARACEAERPGVGSCK 81
Query: 116 LSSALHQHSEKGLVD---TPCFQRTPTPDLSDP 145
LSS Q + L D Q +P P S P
Sbjct: 82 LSSPRAQAASAALRDLREAQGAQASPPPGSSGP 114
>gi|30089966 CDC42 effector protein 5 [Homo sapiens]
Length = 148
Score = 32.0 bits (71), Expect = 0.28
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 132 PCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQML 165
P ++ P +DP LSF +DLG S+L+ VL ++
Sbjct: 74 PAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVM 107
>gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens]
Length = 272
Score = 31.2 bits (69), Expect = 0.48
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 77 LAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSALHQHSEKG 127
L P PP L S S P +L P A + + PS+L++ A + E G
Sbjct: 202 LCPDHPPSLGTRSKSVPELLVPAEAQSFRTPKSGPSSLAIPGAQDREEETG 252
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 31.2 bits (69), Expect = 0.48
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 54 ELQGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEP--------PPAYTAA 105
EL+ P+ +P P + + PP+PP Y +S L P PP + +
Sbjct: 142 ELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPP--SQS 199
Query: 106 YSATLPSALSLSSALHQHSEKGLVDTPCFQRTPT 139
Y A PS S SS+ + P Q +P+
Sbjct: 200 YLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPS 233
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 30.8 bits (68), Expect = 0.63
Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 17/117 (14%)
Query: 28 RQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPKPPRLYR 87
R+ + +AS A EE + R +E GRP G E PR P + PR
Sbjct: 343 REVAAAVRASVAAQQQEE-ARRSEDQEEGGRPKKEEAAARGPEDPR----GPRRSPRTQG 397
Query: 88 ESSSCPNILEPPPAYTAAYSATLPSALSLSSALHQHSEKGLVDTPCFQRTPTPDLSD 144
E P A+S T P+A G V P P+P L D
Sbjct: 398 EGPGPKETSTNGPVSQEAFSVTGPAA------------PGCVGVPGALPPPSPKLKD 442
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 30.4 bits (67), Expect = 0.82
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 72 PRATLLAPPKPPRLYRESSSCPNILEP-PPAYTAA 105
PR L APP+PPR + + P +P PPA A
Sbjct: 561 PRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQA 595
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 19 SLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATL-- 76
+L RP R ++ + ++A T G + +E + E++ + +G PL + PR+ L
Sbjct: 1044 ALSRPGR---EACLEARAHTGDGAKPDSPQKETL-EVENQQEGGLKPLAQEHGPRSALGG 1099
Query: 77 --LAPPKPPRLYRESSSCPNILEPPP-----AYTAAYSATLPSALSLSSALHQHSE---- 125
P PP E S +L P + + TLPSA++ ++L E
Sbjct: 1100 AREVPDAPPAACPEVSQA-RLLSPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVG 1158
Query: 126 ------KGLVDTPCFQRTPTPDLSDPFL 147
+G D P PT +P L
Sbjct: 1159 AVSSLDRGCPDAPAPTSAPTSQQPEPVL 1186
>gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 30.0 bits (66), Expect = 1.1
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 58 RPDGRRLPLWGDEQPRATLLA-----------PPKPPRLYRESSSCPNILEPPPAYTAAY 106
RP R P + PR L PP PRL+R +S+ P L P
Sbjct: 114 RPHPRCYPPFALSAPRPPALGASATAFRSSSDPPARPRLFRRASASPAQLRLP------- 166
Query: 107 SATLPSALSLSSALHQHSEKGLVDTPCFQ------RTPTPDLSDPFLSFKVDL 153
+ L SALS L S G++ C + P P S P+L F L
Sbjct: 167 -SRLASALSAQLRLPHPSSPGVLPWRCLSLSVSDLKLPLPP-SWPWLGFSAAL 217
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 19 SLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATL-- 76
+L RP R ++ + ++A T G + +E + E++ + +G PL + PR+ L
Sbjct: 1004 ALSRPGR---EACLEARAHTGDGAKPDSPQKETL-EVENQQEGGLKPLAQEHGPRSALGG 1059
Query: 77 --LAPPKPPRLYRESSSCPNILEPPP-----AYTAAYSATLPSALSLSSALHQHSE---- 125
P PP E S +L P + + TLPSA++ ++L E
Sbjct: 1060 AREVPDAPPAACPEVSQA-RLLSPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVG 1118
Query: 126 ------KGLVDTPCFQRTPTPDLSDPFL 147
+G D P PT +P L
Sbjct: 1119 AVSSLDRGCPDAPAPTSAPTSQQPEPVL 1146
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 19 SLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATL-- 76
+L RP R ++ + ++A T G + +E + E++ + +G PL + PR+ L
Sbjct: 1004 ALSRPGR---EACLEARAHTGDGAKPDSPQKETL-EVENQQEGGLKPLAQEHGPRSALGG 1059
Query: 77 --LAPPKPPRLYRESSSCPNILEPPP-----AYTAAYSATLPSALSLSSALHQHSE---- 125
P PP E S +L P + + TLPSA++ ++L E
Sbjct: 1060 AREVPDAPPAACPEVSQA-RLLSPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVG 1118
Query: 126 ------KGLVDTPCFQRTPTPDLSDPFL 147
+G D P PT +P L
Sbjct: 1119 AVSSLDRGCPDAPAPTSAPTSQQPEPVL 1146
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 19 SLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATL-- 76
+L RP R ++ + ++A T G + +E + E++ + +G PL + PR+ L
Sbjct: 1044 ALSRPGR---EACLEARAHTGDGAKPDSPQKETL-EVENQQEGGLKPLAQEHGPRSALGG 1099
Query: 77 --LAPPKPPRLYRESSSCPNILEPPP-----AYTAAYSATLPSALSLSSALHQHSE---- 125
P PP E S +L P + + TLPSA++ ++L E
Sbjct: 1100 AREVPDAPPAACPEVSQA-RLLSPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVG 1158
Query: 126 ------KGLVDTPCFQRTPTPDLSDPFL 147
+G D P PT +P L
Sbjct: 1159 AVSSLDRGCPDAPAPTSAPTSQQPEPVL 1186
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 19 SLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATL-- 76
+L RP R ++ + ++A T G + +E + E++ + +G PL + PR+ L
Sbjct: 1004 ALSRPGR---EACLEARAHTGDGAKPDSPQKETL-EVENQQEGGLKPLAQEHGPRSALGG 1059
Query: 77 --LAPPKPPRLYRESSSCPNILEPPP-----AYTAAYSATLPSALSLSSALHQHSE---- 125
P PP E S +L P + + TLPSA++ ++L E
Sbjct: 1060 AREVPDAPPAACPEVSQA-RLLSPAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVG 1118
Query: 126 ------KGLVDTPCFQRTPTPDLSDPFL 147
+G D P PT +P L
Sbjct: 1119 AVSSLDRGCPDAPAPTSAPTSQQPEPVL 1146
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 71 QPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSL----SSALH 121
QPR TL PP P L R ++S P L P P + PS + + S+LH
Sbjct: 501 QPRPTLNQPPPP--LIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSLH 553
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 71 QPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSL----SSALH 121
QPR TL PP P L R ++S P L P P + PS + + S+LH
Sbjct: 443 QPRPTLNQPPPP--LIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSLH 495
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor
[Homo sapiens]
Length = 247
Score = 30.0 bits (66), Expect = 1.1
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 30 SSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPKPP 83
S L S+A E+ S E + + G+P+GRR P G++ R PP PP
Sbjct: 7 SVALLALSSAESSSEDVSQEESLFLISGKPEGRR-PQGGNQPQR-----PPPPP 54
>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
Length = 639
Score = 30.0 bits (66), Expect = 1.1
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 16/84 (19%)
Query: 65 PLWGDEQPRATLL------APPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSS 118
PLW P +T +P PP R S++ P P + + P+ ++
Sbjct: 96 PLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATT 155
Query: 119 ALHQHSEKGLVDTPCFQRTPTPDL 142
V P RTPTPDL
Sbjct: 156 ----------VPAPTTPRTPTPDL 169
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 30.0 bits (66), Expect = 1.1
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 26 LRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPKPPRL 85
L+ Q + LS + + YS R R L+G P G L +AT A P PR
Sbjct: 908 LKSQLTPLSSSQESYLPPPAYSPRFQPRGLEG-PGGLEGRL------QATGQARPPAPRP 960
Query: 86 YRE-------SSSCPNILEPPPAYTAAYSATLPSALS 115
+ SSS P +EPPP Y + L S +S
Sbjct: 961 FHHGQYYGYLSSSSPGEVEPPPFYVPEVGSPLSSVMS 997
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 29.6 bits (65), Expect = 1.4
Identities = 37/129 (28%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Query: 27 RRQSSVLSQASTAGGDHEEYSNREV-IRELQGRPDGRRLPLWGDEQPRATLLAPPK---P 82
R++ V +Q S +S+R I E +G G P G P L PPK P
Sbjct: 142 RKEPLVFTQRSLLHSSPRWFSSRHSSISEGEGDRCGFAEPPGGSSPPAPPLPPPPKPGSP 201
Query: 83 PRLYRESSSCP---NILEPPPAYTAAYSATLPSALSLSSALHQHSEKGLVDTPCF---QR 136
+ RE+SS + PP T + SS L + G + T QR
Sbjct: 202 TQRAREASSWKPPGHSHTAPPGRGTQRPLTQRHSSESSSELSSSAWPGTIWTSTLSPGQR 261
Query: 137 TPTPDLSDP 145
PTP DP
Sbjct: 262 LPTPPPPDP 270
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 29.6 bits (65), Expect = 1.4
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 34 SQASTAGGDHEEYSNREVIRELQGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRESSSCP 93
++ +++GGDH + + ++ E +G G RLPL P + P P E +S P
Sbjct: 766 TETASSGGDHPQ-AEPKLATEAEGTT-GPRLPL--PSVPSPSQEGAPLPS----EEASAP 817
Query: 94 NILEPPPAYTAAYSATLPSALSLSSALHQHSEKGLVDTPCFQRTPTPD 141
+ + P + SA+ L+SAL+ S V+ P + T +
Sbjct: 818 DAPDALPDSPTPATGGEVSAIKLASALNGSSSSPEVEAPSSEDEDTAE 865
>gi|239754275 PREDICTED: hypothetical protein [Homo sapiens]
Length = 250
Score = 28.9 bits (63), Expect = 2.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 56 QGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRE-SSSCPNILEPPPAYTAAYSATLPSAL 114
+ +P RRLP + R T PKP L R S+ P++ P + A S+ +A
Sbjct: 178 RSQPWTRRLPETAAGRSRQT----PKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAA 233
Query: 115 SLSSALHQ 122
+L++ LH+
Sbjct: 234 TLAARLHR 241
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 28.9 bits (63), Expect = 2.4
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
Query: 68 GDEQPRATLLAPPKPP--------RLYRESSSCPNILEPPPAYTAAYSATLP 111
G PR L APP+PP L S+SC + PPP + A LP
Sbjct: 269 GGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAV-PPPPPLRGSVGAELP 319
>gi|239748810 PREDICTED: hypothetical protein XP_002346829 [Homo
sapiens]
Length = 132
Score = 28.9 bits (63), Expect = 2.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 56 QGRPDGRRLPLWGDEQPRATLLAPPKPPRLYRE-SSSCPNILEPPPAYTAAYSATLPSAL 114
+ +P RRLP + R T PKP L R S+ P++ P + A S+ +A
Sbjct: 60 RSQPWTRRLPETAAGRSRQT----PKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAA 115
Query: 115 SLSSALHQ 122
+L++ LH+
Sbjct: 116 TLAARLHR 123
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 28.9 bits (63), Expect = 2.4
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
Query: 68 GDEQPRATLLAPPKPP--------RLYRESSSCPNILEPPPAYTAAYSATLP 111
G PR L APP+PP L S+SC + PPP + A LP
Sbjct: 269 GGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAV-PPPPPLRGSVGAELP 319
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 28.9 bits (63), Expect = 2.4
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 75 TLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSA 119
T PP PPRL+ ++ PPP + +A LP A + ++A
Sbjct: 213 TAFYPPPPPRLFVAAA-----FSPPPPWLSARRGFLPPAAAAAAA 252
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,246,349
Number of Sequences: 37866
Number of extensions: 426288
Number of successful extensions: 1882
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 1795
Number of HSP's gapped (non-prelim): 173
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.