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Search of human proteins with 194363725
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
(1152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 2338 0.0
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 2285 0.0
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 2171 0.0
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 1337 0.0
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 76 2e-13
gi|160707881 formin 2 [Homo sapiens] 75 3e-13
gi|33356148 formin-like 1 [Homo sapiens] 75 3e-13
gi|7706501 WW domain binding protein 11 [Homo sapiens] 74 6e-13
gi|163965366 nascent polypeptide-associated complex alpha subuni... 72 2e-12
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 72 4e-12
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 70 9e-12
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 70 9e-12
gi|150170670 piccolo isoform 2 [Homo sapiens] 70 2e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 70 2e-11
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 69 2e-11
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 69 3e-11
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 69 3e-11
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 69 3e-11
gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens] 68 4e-11
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 67 1e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 67 1e-10
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 66 2e-10
gi|146134388 YLP motif containing 1 [Homo sapiens] 66 2e-10
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 65 4e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 65 4e-10
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 65 4e-10
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 65 4e-10
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 65 4e-10
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 64 6e-10
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 64 6e-10
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 2338 bits (6060), Expect = 0.0
Identities = 1152/1152 (100%), Positives = 1152/1152 (100%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
Query: 1141 SPGTVTPVPPPQ 1152
SPGTVTPVPPPQ
Sbjct: 1141 SPGTVTPVPPPQ 1152
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 2285 bits (5921), Expect = 0.0
Identities = 1130/1152 (98%), Positives = 1130/1152 (98%), Gaps = 22/1152 (1%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
PFPNQQTPPSMMPGAVPGSGHPGVA DPGTPLPPDPTAP
Sbjct: 1081 PFPNQQTPPSMMPGAVPGSGHPGVA----------------------DPGTPLPPDPTAP 1118
Query: 1141 SPGTVTPVPPPQ 1152
SPGTVTPVPPPQ
Sbjct: 1119 SPGTVTPVPPPQ 1130
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 2171 bits (5626), Expect = 0.0
Identities = 1085/1141 (95%), Positives = 1086/1141 (95%), Gaps = 46/1141 (4%)
Query: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
Sbjct: 1 MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ 60
Query: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
Sbjct: 61 EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN 120
Query: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
Sbjct: 121 VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP 180
Query: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
Sbjct: 181 VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK 240
Query: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
Sbjct: 241 WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK 300
Query: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
Sbjct: 301 RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
Sbjct: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
Sbjct: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPLQPKTPQ QTSASQQMLNFPDKGKEKP
Sbjct: 541 LVPLQPKTPQ-------------------------------QTSASQQMLNFPDKGKEKP 569
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 570 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 629
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 630 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 689
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
Sbjct: 690 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 749
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
Sbjct: 750 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 809
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
Sbjct: 810 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 869
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
Sbjct: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 1020
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
Sbjct: 930 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA 989
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
Sbjct: 990 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1049
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
PFPNQQTPPSMMPGAVPGSGHPGVA +P LP G P PP P AP
Sbjct: 1050 PFPNQQTPPSMMPGAVPGSGHPGVAGNAPL--------------GLPF-GMPPPPPPPAP 1094
Query: 1141 S 1141
S
Sbjct: 1095 S 1095
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 1337 bits (3461), Expect = 0.0
Identities = 706/1158 (60%), Positives = 852/1158 (73%), Gaps = 105/1158 (9%)
Query: 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEV 63
R+KDGGP K++E+ +TV+Q D+VR+WLGK+YKKY+ A+ PTNK+L+ LVVQLLQFQE+
Sbjct: 32 RRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDA 91
Query: 64 FGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEM 123
FGKHV+N TKLP KCF+DFKAGG+LCHIL AAYK+K++QGWRR+D QNPSRMDRNVEM
Sbjct: 92 FGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEM 151
Query: 124 FMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPG 183
FM IEK+LVQNNCL+RPNI+L P+I+ KL KLKDIIKRHQGT T++K+ ASH +YP
Sbjct: 152 FMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSS 211
Query: 184 NLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
+ ++EEW+RPVM+++KQVL+HWG+YPDSYDTW+ +++++A +ED P PEKP KVH KWIL
Sbjct: 212 SQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWIL 271
Query: 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGG-NYKKRKRS 302
DTD FNEWMNEEDYEV++++ PVS R++IS K + V SP+ RRD+K N +KRK S
Sbjct: 272 DTDIFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSPE--RRDRKASANARKRKHS 328
Query: 303 PSPSP-TP-EAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT 360
PSP P TP E++KK+ KKG ++ Y K + E+EQEDLTKDM++P+PVPN+EEV LPK
Sbjct: 329 PSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKN 388
Query: 361 VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ 420
VN KKDSE+ PVKGGT+ DLDEQ++E++ GK++++ + KG+Q+++ DL EDNVTEQ
Sbjct: 389 VNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPA---KGDQSRSVDLGEDNVTEQ 445
Query: 421 THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 480
T+HIIIPSYA+WFDYN +H IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
Sbjct: 446 TNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY 505
Query: 481 LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG 540
LTSTACRRNL GDVCA+MRVHAFLEQWGL+NYQVD ESRP MGPPPT HF+VLADTPSG
Sbjct: 506 LTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSG 565
Query: 541 LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP 600
LVPL ++PQ VP A+QQMLNFP+K KEKP
Sbjct: 566 LVPLHLRSPQ--------------------VP------------AAQQMLNFPEKNKEKP 593
Query: 601 TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS 660
D+QNFGLRTD+Y+KK + +KSK A SA REWTEQETLLLLEALEMYKDDWNKVSEHVGS
Sbjct: 594 VDLQNFGLRTDIYSKKTL-AKSKGA-SAGREWTEQETLLLLEALEMYKDDWNKVSEHVGS 651
Query: 661 RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA 720
RTQDECILHFLRLPIEDPYLE+S+ASLGPLAYQP+PFSQSGNPVMSTVAFLASVVDPRVA
Sbjct: 652 RTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVA 711
Query: 721 SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE 780
SAAAK+ALEEFS+++EEVP LVEAHV+KV+EAA+ +GK DP +GLESS IAGT DEPE
Sbjct: 712 SAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPE 771
Query: 781 RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
++E G +E ++E ++ E E + +E E E +K ++G++EK
Sbjct: 772 KLE--GAEEEKMEADPDGQQPEKAENK-----VENETDEG---------DKAQDGENEKN 815
Query: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGER-----KTKVERDIGEGNLSTAAAA 895
SEK D V + + E KE +E KE+ ++ ER K KVE +I EGN++TAAAA
Sbjct: 816 SEKEQ-DSEVSEDTKSEEKETEEN--KELTDTCKERESDTGKKKVEHEISEGNVATAAAA 872
Query: 896 ALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQR 955
ALA+AA KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE+EALE QR
Sbjct: 873 ALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQR 932
Query: 956 QQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVH 1015
QQLL +RQ FHMEQLKYAE+RARQQ QQ H Q Q G + P GAAG P
Sbjct: 933 QQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQ-HSGGPGLAPLGAAGHP--- 988
Query: 1016 GLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG 1075
G P P + Q P PQPG +P PG
Sbjct: 989 ----------------GMMPHQQPPPYPLMH-------HQMPPPHPPQPGQIPG----PG 1021
Query: 1076 PHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPG--TPL 1133
S P Q P M+P V + HP + +P + + GN+L PL P P
Sbjct: 1022 ----SMMPGQHMPGRMIP-TVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPP 1076
Query: 1134 PPDPTAPSPGTVTPVPPP 1151
PP P P VPPP
Sbjct: 1077 PPQQQPPPPPPADGVPPP 1094
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 76.3 bits (186), Expect = 2e-13
Identities = 59/171 (34%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 986 HQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIG 1045
HQQQQQPPP PP QP PP P H P P P S P + GP
Sbjct: 66 HQQQQQPPPQQPPPQQP-PPHQPPPHPQPHQQQQPP----PPPQDSSKPVVAQGP----- 115
Query: 1046 QAGSTAGPQQQQPAGAPQPGAVPP--GVPPPGPHGPSPFPNQ---QTPPSMMPGAVPGSG 1100
G G PA + P A PP G PP GP+P P PP P P SG
Sbjct: 116 --GPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG 173
Query: 1101 HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1151
P Q+ P+A P P PG P P P G + P P
Sbjct: 174 VPTTPPQAGGPPPP------PAAVPGPGPGPKQGPGPGGPKGGKMPGGPKP 218
Score = 69.3 bits (168), Expect = 2e-11
Identities = 61/183 (33%), Positives = 66/183 (36%), Gaps = 23/183 (12%)
Query: 981 HFQQMHQQQQQPPPALPPGSQ-------------PIPPTGAAGPPAVHGLAVAPASVVPA 1027
H QQ QQPPP PP Q P PP ++ P G AP
Sbjct: 66 HQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP 125
Query: 1028 PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP--HGPSPFPNQ 1085
PA S APP + P GS GP P P + PPG PPP P G P Q
Sbjct: 126 PASSSAPPAT--PPTSGAPPGSGPGP---TPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 1086 QTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLP-PDPTAPSPGT 1144
P P AVPG G PG Q P G + P PG P P P G
Sbjct: 181 AGGPPPPPAAVPGPG-PG-PKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGG 238
Query: 1145 VTP 1147
P
Sbjct: 239 GEP 241
Score = 56.2 bits (134), Expect = 2e-07
Identities = 53/162 (32%), Positives = 57/162 (35%), Gaps = 35/162 (21%)
Query: 1011 PPAVHGLAVAPASVVPAPAGSGA-PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP 1069
PP GL + P P SG PP P Q QQQ P P P PP
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQ---------QQQQPPPQQPPPQQPPP 84
Query: 1070 GVPPPGPHGPSPFPNQQTPP----------SMMPGAVPGSGHPGVAAQSPAIVAAVQGNL 1119
PPP P P QQ PP + PG PG G A+ S
Sbjct: 85 HQPPPHPQ---PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA 141
Query: 1120 LPSASPLPDPGTPLP---------PDPTAPSPGTVTPVPPPQ 1152
P + P P P TP P P PT PS G P PPQ
Sbjct: 142 PPGSGPGPTP-TPPPAVTSAPPGAPPPTPPSSGV--PTTPPQ 180
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/158 (31%), Positives = 56/158 (35%), Gaps = 39/158 (24%)
Query: 984 QMHQQQQQPPP---------ALPPGSQP----IPPTGAAGPPAVHGLAVAPA------SV 1024
Q HQQQQ PPP A PG P PP ++ PPA + AP +
Sbjct: 92 QPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTP 151
Query: 1025 VPAPAGSGAPPGS---LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP------------- 1068
P PA + APPG+ PS + AG PA P PG P
Sbjct: 152 TPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGK 211
Query: 1069 -PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG---HP 1102
PG P PG P P G P G HP
Sbjct: 212 MPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHP 249
Score = 49.7 bits (117), Expect = 2e-05
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 1033 APPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP--- 1089
+PP +G ++ G G G +P P P PPP P P Q PP
Sbjct: 33 SPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQ 92
Query: 1090 ---SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVT 1146
P P V AQ P V G+ P++S P P P PG T
Sbjct: 93 PHQQQQPPPPPQDSSKPVVAQGPGPAPGV-GSAPPASSSAPPATPPTSGAPPGSGPGP-T 150
Query: 1147 PVPPP 1151
P PPP
Sbjct: 151 PTPPP 155
Score = 45.1 bits (105), Expect = 4e-04
Identities = 36/108 (33%), Positives = 40/108 (37%), Gaps = 12/108 (11%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPA-GSGAPPGSLGPS--EQIGQAG 1048
PPP P P P A GPP P + VP P G PG GP + G
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPP-------PPAAVPGPGPGPKQGPGPGGPKGGKMPGGPK 217
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQ--QTPPSMMPG 1094
GP P G P+P G P G P+ Q Q PP PG
Sbjct: 218 PGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPG 265
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 75.5 bits (184), Expect = 3e-13
Identities = 59/171 (34%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 992 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP G P PP AG PP + G+ + P +P G+G PP P I
Sbjct: 1076 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1132
Query: 1048 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGPHGPSPFPNQQTPPSMMPGA--VPGS 1099
G P P+ G PP G+PPP P + P PP +PG P
Sbjct: 1133 PPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIP----PPPPLPGVGIPPPP 1188
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
PGV P + G +P PLP G P P P P PGT P PP
Sbjct: 1189 PLPGVGIPPP---PPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1236
Score = 74.7 bits (182), Expect = 5e-13
Identities = 62/192 (32%), Positives = 76/192 (39%), Gaps = 41/192 (21%)
Query: 991 QPPPA-----LPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP------GSLG 1039
QPPP LPP P+P G PP + G + P +P G+G PP ++
Sbjct: 898 QPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLP---GAGIPPPPPLPGAAIP 954
Query: 1040 PSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGP------HGPSPFPNQQTPPSMM 1092
P + AG P AG P P +P G+PPP P P P P PP
Sbjct: 955 PPPPLPGAGIPL-PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP--- 1010
Query: 1093 PGAVPGSG------HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP-------DPTA 1139
P +PG+G PG P + G +P PLP G P PP P
Sbjct: 1011 PPPLPGAGIPPPPPLPGAGIPPP---PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1067
Query: 1140 PSPGTVTPVPPP 1151
P PG P PPP
Sbjct: 1068 PLPGAGIPPPPP 1079
Score = 72.8 bits (177), Expect = 2e-12
Identities = 63/197 (31%), Positives = 73/197 (37%), Gaps = 43/197 (21%)
Query: 992 PPPALP-PGSQPIPPTGAAG---PPAVHGLAVAPASVVPAPA--------GSGAPPGSLG 1039
PPP LP G P+PP AG PP + G A+ P +P G+G PP
Sbjct: 922 PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Query: 1040 PSEQIGQAGSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQT 1087
P I G P P G PP G+PPP P P P P
Sbjct: 982 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1041
Query: 1088 PPSMMPGAVPGSG------HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP------ 1135
PP P +PG+G PG P + G +P PLP G P PP
Sbjct: 1042 PP---PPPLPGAGIPPPPPLPGAGIPPP---PPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1095
Query: 1136 -DPTAPSPGTVTPVPPP 1151
P P PG P PPP
Sbjct: 1096 IPPPPPLPGVGIPPPPP 1112
Score = 72.0 bits (175), Expect = 3e-12
Identities = 60/182 (32%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 992 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP P P+P G PP + G + P +P G+G PP P I
Sbjct: 977 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1033
Query: 1048 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1095
G P P G PP G+PPP P P P P PP P
Sbjct: 1034 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1090
Query: 1096 VPGSGHP------GVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
+PG+G P GV P + G +P PLP G +PP P P PG P P
Sbjct: 1091 LPGAGIPPPPPLPGVGIPPPP---PLPGAGIPPPPPLPGAG--IPPPP--PLPGAGIPPP 1143
Query: 1150 PP 1151
PP
Sbjct: 1144 PP 1145
Score = 70.5 bits (171), Expect = 9e-12
Identities = 61/189 (32%), Positives = 71/189 (37%), Gaps = 38/189 (20%)
Query: 992 PPPALPPGS-QPIPPTGAAG---PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP + P PP AG PP + G + P +P G+G PP P I
Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP---GAGIPPPPPLPGAGIPPP 1000
Query: 1048 GSTAGPQQQQPAGAPQPGAVPP------GVPPPGP------HGPSPFPNQQTPPSMMPGA 1095
G P P G PP G+PPP P P P P PP P
Sbjct: 1001 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP---PPP 1057
Query: 1096 VPGSG------HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP-------DPTAPSP 1142
+PG+G PG P + G +P PLP G P PP P P P
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPP---PPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLP 1114
Query: 1143 GTVTPVPPP 1151
G P PPP
Sbjct: 1115 GAGIPPPPP 1123
Score = 60.5 bits (145), Expect = 9e-09
Identities = 50/157 (31%), Positives = 59/157 (37%), Gaps = 50/157 (31%)
Query: 992 PPPALP----PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PPP LP P P+P G PP + G + P +P G+G PP
Sbjct: 1131 PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLP---GAGIPP------------ 1175
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAA 1106
P G P P +P G+PP P P P PP P +PG G P
Sbjct: 1176 -----PPPLPGVGIPPPPPLPGVGIPP-----PPPLPGAGIPP---PPPLPGMGIP---- 1218
Query: 1107 QSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPG 1143
PA A PLP PGT +PP P P G
Sbjct: 1219 --PA-----------PAPPLPPPGTGIPPPPLLPVSG 1242
Score = 52.4 bits (124), Expect = 2e-06
Identities = 80/333 (24%), Positives = 124/333 (37%), Gaps = 56/333 (16%)
Query: 844 SDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVK 903
S G P P++E ++ + E V E+ +R V++++ + +K
Sbjct: 624 SMGPPSKPPDEEHRLEDAETESQSAVSETPQKRSDAVQKEVVD---------------MK 668
Query: 904 AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 963
++ A V ++ +++ L T++ +LE R + L+T + + LE + A
Sbjct: 669 SEGQATVIQQLEQTIEDL--RTKIAELE---RQYPALDTEVASGHQGLE---NGVTASGD 720
Query: 964 AFHMEQLKYAEMRARQQHFQQMHQQQQQPPP-----ALPP-----GSQPIPPTGAAGPPA 1013
+E L+ E R + Q P LPP G P PP +GP
Sbjct: 721 VC-LEALRLEEKEVRHHRILEAKSIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQT 779
Query: 1014 VHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPG--- 1070
+ S++ +P S P++ I Q P AG QPG+ PP
Sbjct: 780 KF---CSEISLIVSPRRISVQLDSHQPTQSISQPPPP--PSLLWSAGQGQPGSQPPHSIS 834
Query: 1071 --VPPPGPHG-PSPFPNQQTPPSMMP-------GAVPGSGHPGVAAQSPAIVAAVQGNLL 1120
H S F N PS P ++PG G V P + L
Sbjct: 835 TEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGM--VPPPPPPLPGMTVPTLP 892
Query: 1121 PSASPLPDP--GTPLPPDPTAPSPGTVTPVPPP 1151
+A P P P GT + P P P PG P PPP
Sbjct: 893 STAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPP 925
Score = 45.8 bits (107), Expect = 2e-04
Identities = 52/224 (23%), Positives = 81/224 (36%), Gaps = 37/224 (16%)
Query: 954 QRQQLLAD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPP 1012
+++ LL+D +QA ++Q +QQ Q+ QQQQ L +P P A P
Sbjct: 191 EQEDLLSDIQQAIRLQQ--------QQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQ 242
Query: 1013 AVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG---STAGPQQQQPAGAPQPGAVP- 1068
L + + P+ G+G PGS + + + + ++P P PG +P
Sbjct: 243 PGAFLGLDRFLLGPS-GGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPV 301
Query: 1069 ------PGVPPPGPHGPS----PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGN 1118
P P PS PFP V G+G + A A +G+
Sbjct: 302 SEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGS 361
Query: 1119 LLPSASPLPDPGTPLP-----------PDPTAPSPGTVTPVPPP 1151
P P+ G P P AP+ ++ P P
Sbjct: 362 --PGEEWAPEVGEDAPQRLGEEPEEEAQGPDAPAAASLPGSPAP 403
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 75.5 bits (184), Expect = 3e-13
Identities = 72/253 (28%), Positives = 92/253 (36%), Gaps = 55/253 (21%)
Query: 920 ALLVETQMKKLEIKLRHFEELET----IMDREREALEYQRQQLLADRQAFHMEQLKYAEM 975
ALL +T+ K L H EEL+ + +R R+A ++ + + + +
Sbjct: 386 ALLEDTETKNAV--LEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQARKELETL 443
Query: 976 RARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAA----------------GPPAVHGLAV 1019
R R M ++ P P P + P P+ GP + +
Sbjct: 444 RERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEI 503
Query: 1020 APASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ-QPAGAPQPGAVPPGVPPPGPHG 1078
P +V G PG T P PA P PGA PP PPP P
Sbjct: 504 LPVAVATPSGGDAPTPGV-----------PTGSPSPDLAPAAEPAPGAAPPP-PPPLPGL 551
Query: 1079 PSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT 1138
PSP Q+ PPS P A P G P P A PLP P PP P
Sbjct: 552 PSP---QEAPPSAPPQAPPLPGSPEP----------------PPAPPLPGD-LPPPPPPP 591
Query: 1139 APSPGTVTPVPPP 1151
P PGT PVPPP
Sbjct: 592 PPPPGTDGPVPPP 604
Score = 48.5 bits (114), Expect = 4e-05
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 999 GSQPIP--PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
G P P PTG+ P +APA+ PAP + PP L +A +A PQ
Sbjct: 514 GDAPTPGVPTGSPSPD------LAPAAE-PAPGAAPPPPPPLPGLPSPQEAPPSAPPQAP 566
Query: 1057 QPAGAPQPGAVPPGV----PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
G+P+P PP PPP P P P + PP P P G P
Sbjct: 567 PLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPP 616
Score = 46.2 bits (108), Expect = 2e-04
Identities = 36/121 (29%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P P L P ++P P PP + GL + AP + PGS P G
Sbjct: 526 PSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLP 585
Query: 1052 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV---PGSGHPGVAAQS 1108
P P G VPP PPP P PP P A+ PGV A+
Sbjct: 586 PPPPPPPPPPGTDGPVPPPPPPPPP-----------PPGGPPDALGRRDSELGPGVKAKK 634
Query: 1109 P 1109
P
Sbjct: 635 P 635
Score = 40.0 bits (92), Expect = 0.013
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 991 QPPPALP-PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
+PPPA P PG P PP PP G V P P PPG GP + +G+ S
Sbjct: 573 EPPPAPPLPGDLPPPPPPPPPPPGTDG------PVPPPPPPPPPPPG--GPPDALGRRDS 624
Query: 1050 TAGP 1053
GP
Sbjct: 625 ELGP 628
Score = 38.1 bits (87), Expect = 0.049
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPF---PNQQTPPSMMPGAV- 1096
S +G + P++ PA +P A+ V G P ++P AV
Sbjct: 450 STAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVA 509
Query: 1097 -PGSGH---PGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD-PTAPSPGTVTPVPPP 1151
P G PGV SP+ +L P+A P P P PP P PSP P PP
Sbjct: 510 TPSGGDAPTPGVPTGSPS------PDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPP 563
Query: 1152 Q 1152
Q
Sbjct: 564 Q 564
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 74.3 bits (181), Expect = 6e-13
Identities = 88/328 (26%), Positives = 136/328 (41%), Gaps = 39/328 (11%)
Query: 830 EKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNL 889
++G + D SE DG P + + + + K ES+G+ V RD GE +
Sbjct: 242 QRGHDDDVSSTSE-DDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEF--VHRDNGERDN 298
Query: 890 STAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERE 949
+ + L+ V+ + +K K++ L T ++ + +++ E I + RE
Sbjct: 299 NEEKKSGLS---VRFADMPGKSRKKKKNMKEL---TPLQAMMLRMAGQE----IPEEGRE 348
Query: 950 ALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQ--------QQQQPPPALPPGSQ 1001
E+ D AE ++++QH ++ H QQQ PP ++PP
Sbjct: 349 VEEFSEDDDEDDSDDSE------AEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402
Query: 1002 PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1061
PP GPP + G AP P P +G PPG + + G + P
Sbjct: 403 QAPPM--PGPPPL-GPPPAPPLRPPGPP-TGLPPGPPPGAPPFLRPPGMPGLRGPLPRLL 458
Query: 1062 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLP 1121
P PG PPG PP P GP P PP P +P PG+ P + ++ L+P
Sbjct: 459 P-PGP-PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGM---MRPPLVP 513
Query: 1122 SASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
P P PG PP P P+PG ++ P
Sbjct: 514 PLGPAP-PGL-FPPAP-LPNPGVLSAPP 538
Score = 62.8 bits (151), Expect = 2e-09
Identities = 73/311 (23%), Positives = 116/311 (37%), Gaps = 58/311 (18%)
Query: 828 DEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 887
D++K + + +++KSDG+ +G E V ++ GER E+ G
Sbjct: 263 DQDKHDDSTDDSDTDKSDGE-----------SDGDEFVHRD----NGERDNNEEKKSG-- 305
Query: 888 NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 947
LS A + K K++ +++ L A+++ +++ + R EE D +
Sbjct: 306 -LSVRFADMPGKSRKKKKNM-----KELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDED 359
Query: 948 -REALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPP--GSQPIP 1004
+ E ++Q ++ H + A + + Q Q PP PP G P P
Sbjct: 360 DSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAP 419
Query: 1005 PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAG---- 1060
P GPP GL P P PG GP ++ G G P G
Sbjct: 420 PLRPPGPPT--GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPG 477
Query: 1061 ---APQPGAVPPGVPPPGPHG-PSPFPNQQTP---------------PSMMPGAVPGSGH 1101
P P PP +PPP P G P P P P P+ +P +
Sbjct: 478 LPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLP-------N 530
Query: 1102 PGVAAQSPAIV 1112
PGV + P ++
Sbjct: 531 PGVLSAPPNLI 541
Score = 31.6 bits (70), Expect = 4.5
Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 29/162 (17%)
Query: 922 LVETQMKKLEIKLRH-FEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRAR-Q 979
L E +K KLR FE + + ++E + + ++L +++Y + RA+
Sbjct: 73 LNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKL----------EVEYEQKRAQLS 122
Query: 980 QHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG 1039
Q+F + Q ++P P P+ + P PP L
Sbjct: 123 QYFDAVKNAQHVEVESIPLPDMPHAPSNIL--------------IQDIPLPGAQPPSILK 168
Query: 1040 PSEQIGQAGSTAGPQQQQPAGAPQ--PGAVPPGVPPPGPHGP 1079
+ G G P+ PG PPG PPPGP P
Sbjct: 169 KTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPG-PPPGPPPP 209
Score = 31.6 bits (70), Expect = 4.5
Identities = 29/80 (36%), Positives = 31/80 (38%), Gaps = 14/80 (17%)
Query: 1073 PPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTP 1132
P PH PS Q P +PGA P S +A P A S PL G P
Sbjct: 142 PDMPHAPSNILIQDIP---LPGAQPPSILKKTSAYGPPTRAV-------SILPLLGHGVP 191
Query: 1133 -LPPDPTAPSPGTVTPVPPP 1151
LPP P P P PPP
Sbjct: 192 RLPPGRKPPGP---PPGPPP 208
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 72.4 bits (176), Expect = 2e-12
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 40/178 (22%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
PP A PP + P P A PPA + P+P G+ PP + PS +
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK---- 997
Query: 1048 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG---PSPFP-NQQTPPSMMPGAVPGSGHPG 1103
GP P GAP PP V PP P G +PFP TPP+ P + G
Sbjct: 998 ---GGPATPSPKGAP----TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKG----- 1045
Query: 1104 VAAQSPAIVAAVQGNLLPSASPLPDP----------GTPLPPDPTAPSP--GTVTPVP 1149
SPA +G A+ LP P G P PP T PSP G TP P
Sbjct: 1046 ----SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Score = 70.5 bits (171), Expect = 9e-12
Identities = 58/177 (32%), Positives = 71/177 (40%), Gaps = 29/177 (16%)
Query: 992 PPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASV---------VPAPAGSGAPPGSLGP 1040
PP P P + P P G P+ G PA+ P+P G+ P + P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGP----SPFPNQQTPPSMMPG-A 1095
S + G A P P GAP A P P GP P +P P TPPS+ G A
Sbjct: 1227 SPK----GGLATP---SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 1096 VPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
P P A +PA+V P+ S P G P PP T PSP PPP+
Sbjct: 1280 TP----PHKGAPNPAVVTPPSPKGGPATS--PPKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 68.2 bits (165), Expect = 4e-11
Identities = 63/190 (33%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAVHGLAV--APASVVPAPAGSGAPPGSLGPSEQIG 1045
PP A PP + P P GA PPAV + +PA+ P P G+ PP + PS +
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAAT-PFPKGASTPPAATPPSPKGS 1046
Query: 1046 QAGS-----------------TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS----PFPN 1084
A + GP GAP P A P P GP PS P P
Sbjct: 1047 PAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106
Query: 1085 QQTPPSMMPGAV--PGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1142
TPPS G P G P A +P + +G L A+P P G P P T PSP
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATP---PSPKGGL---ATP-PPKGAPTTPAATPPSP 1159
Query: 1143 GTVTPVPPPQ 1152
PPP+
Sbjct: 1160 KGGLATPPPK 1169
Score = 64.3 bits (155), Expect = 6e-10
Identities = 56/167 (33%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 997 PPGSQPIPPTGA-AGPPAVHGLAVAPASVVPAPAGSGAPPGSLG-PSEQIGQAGST-AGP 1053
PP + P P G+ A P G PA+ +P+P G A P G P+ S GP
Sbjct: 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 1054 QQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP----SMMPGAVPGSGHPGVAAQSP 1109
P GAP +PP PP P G TPP P A P S G+A P
Sbjct: 1095 ATPSPKGAP----MPPAATPPSPKG-----GLATPPHKGAPTTPAATPPSPKGGLATPPP 1145
Query: 1110 AIVAAVQGNLLPS-----ASPLPDPGTPLPPDPTAPSP--GTVTPVP 1149
PS A+P P G P P T PSP G TP P
Sbjct: 1146 KGAPTTPAATPPSPKGGLATP-PPKGAPTTPAATPPSPKGGLATPSP 1191
Score = 62.8 bits (151), Expect = 2e-09
Identities = 62/178 (34%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 992 PPPALPPGSQ---PIPPTGAAGP-----PAVHGLAVAP--ASVVPAPAGSGAPPGSLG-P 1040
PP P S P P G A P PA+ + +P A PAP G A P G P
Sbjct: 881 PPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAP 940
Query: 1041 SEQIGQAGS-TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS----PFPNQQTPPSMMPGA 1095
+ S GP P AP P A P P GP PS P P TPPS P
Sbjct: 941 TPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPS--PKG 998
Query: 1096 VPGSGHPGVAAQSPAIV-AAVQGNLLPSASPLPDPGTPLPPDPTAPSP---GTVTPVP 1149
P + P A PA+ + +G+ P+A+P P G PP T PSP TP+P
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGS--PAATPFP-KGASTPPAATPPSPKGSPAATPLP 1053
Score = 62.8 bits (151), Expect = 2e-09
Identities = 59/184 (32%), Positives = 69/184 (37%), Gaps = 27/184 (14%)
Query: 986 HQQQQQPPPALPP----GSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
H+ P A PP G PP GA PA + P P G+ P + PS
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1181
Query: 1042 EQIGQAGSTAGPQQQQPAGAP-QPGAVPP----GVPPPGPHGPSPFPNQQTPPSMMPG-A 1095
+ G A P P GAP P A PP G+ P P G +P TPPS G A
Sbjct: 1182 PK----GGLATP---SPKGAPTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLA 1233
Query: 1096 VPG-SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTP--------LPPDPTAPSPGTVT 1146
P G P A +P P +P P TP PP AP+P VT
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 1147 PVPP 1150
P P
Sbjct: 1294 PPSP 1297
Score = 61.2 bits (147), Expect = 5e-09
Identities = 55/186 (29%), Positives = 67/186 (36%), Gaps = 31/186 (16%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAV--------------HGLAVAPASVVPAPAGSGA 1033
PP A PP + P P GA PPA G PA+ P+P G A
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA 1141
Query: 1034 PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSM 1091
P P + + P + P P P P PP P G P+ + P+
Sbjct: 1142 TP----PPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT- 1196
Query: 1092 MPGAVPGSGHPGVAAQSPAIVAAVQGNLLPS-----ASPLPDPGTPLPPDPTAPSPGTVT 1146
P A P S G+A SP PS A+P P G P P T PSP
Sbjct: 1197 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP-KGAPTTPAATPPSPKGGP 1255
Query: 1147 PVPPPQ 1152
PPP+
Sbjct: 1256 ATPPPK 1261
Score = 60.1 bits (144), Expect = 1e-08
Identities = 54/171 (31%), Positives = 66/171 (38%), Gaps = 30/171 (17%)
Query: 993 PPALPPGSQPIPPTGAAGPPAV------HGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQ 1046
PP+ G PP GA PPA GLA P P PA PP G
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA-VVTPPSPKG------- 1299
Query: 1047 AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAA 1106
GP P GAP P A P P P P P TPP++ P + G+ P + A
Sbjct: 1300 -----GPATSPPKGAPTPPAATPPSPKGSPGTPPP-KGAPTPPAVTPPSPKGT--PTLPA 1351
Query: 1107 QSPAIVAAVQGNLLPSASPLPDPGTPLP-----PDPTAPSPGTVTPVPPPQ 1152
+P ++ G PS+ P P P P T PSP +P P+
Sbjct: 1352 TTP---SSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPK 1399
Score = 59.7 bits (143), Expect = 2e-08
Identities = 57/180 (31%), Positives = 69/180 (38%), Gaps = 24/180 (13%)
Query: 992 PPPALP-PGSQPIPPT--GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA- 1047
P LP P P P+ GA PPA + P+P G+ PP + PS + G A
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119
Query: 1048 ----GSTAGPQQQQPA-----GAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSMMPGAV 1096
G+ P P+ P P P P PP P G P + P+ P A
Sbjct: 1120 PPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT-TPAAT 1178
Query: 1097 PGSGHPGVAAQSPAIVAAVQGNLLPS-----ASPLPDPGTPLPPDPTAPSP--GTVTPVP 1149
P S G+A SP PS A+P P G P P T PSP G TP P
Sbjct: 1179 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP-KGAPTTPAATPPSPKGGLATPSP 1237
Score = 58.2 bits (139), Expect = 5e-08
Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 27/183 (14%)
Query: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLA----VAPASVVPAPAGSGAPPGSLGP--- 1040
Q + PA P P GA P AV L+ P P P+ P GP
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP 903
Query: 1041 -----------SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1089
S +A +T P+ + +P+ PP PP P G P+ + P
Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP 963
Query: 1090 SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDP-GTPLPPDPT-APSPGTVTP 1147
+ P A P S G A SP +G P A+ P P G P P P AP+P VTP
Sbjct: 964 TP-PAATPPSPKGGPATPSP------KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTP 1016
Query: 1148 VPP 1150
P
Sbjct: 1017 PSP 1019
Score = 56.6 bits (135), Expect = 1e-07
Identities = 58/163 (35%), Positives = 64/163 (39%), Gaps = 28/163 (17%)
Query: 1004 PPT--GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA 1061
PPT G+AGP G +P S V A S P SL +T P P GA
Sbjct: 808 PPTKKGSAGPDTPIGNLSSPVSPVEA---SFLPENSLSFQGSKDSPATTHSPTPPSPKGA 864
Query: 1062 PQPGAV----PPGVPPPGPHGPS------PFPNQ--QTP-PSMMPGAVPGSGHPGVAAQS 1108
P P AV P GV P P+ PFP + TP P P S P A +
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924
Query: 1109 PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP--GTVTPVP 1149
PA ASP P G P PP T PSP G TP P
Sbjct: 925 PAPKGI-------PASPSP-KGAPTPPAATPPSPKGGPATPSP 959
Score = 56.6 bits (135), Expect = 1e-07
Identities = 50/173 (28%), Positives = 63/173 (36%), Gaps = 18/173 (10%)
Query: 992 PPPALPPGSQPIP----PTGAAGPPAV-----HGLAVAPASVVPAPAGSGAPPGSLGPSE 1042
PP A PP + P P GA PPAV G PA+ + G P GP+
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP 1371
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGAVPGSG 1100
GP P +P+ G P +P P P P+ P P G+
Sbjct: 1372 PAATPSHKGGPAMTPP--SPKRG---PAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Query: 1101 HPGVAAQSPAIVAAVQGNLLPSAS-PLPDPGTPLPP-DPTAPSPGTVTPVPPP 1151
P +P V V P+ S P P TP DPT P+ +P PP
Sbjct: 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479
Score = 55.5 bits (132), Expect = 3e-07
Identities = 53/175 (30%), Positives = 68/175 (38%), Gaps = 22/175 (12%)
Query: 997 PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
PP + P P G+ G P G PA P+P G+ P + PS + G ++
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT-PSSKGGPTTPSSKEGPT 1370
Query: 1057 QPAGAPQ----PGAVPPGVPPPGPHGPSPFPNQQTPPSMMP------GAVP----GSGHP 1102
PA P P PP P GP PSP T P+++P A P G+ P
Sbjct: 1371 PPAATPSHKGGPAMTPPS-PKRGPAIPSP-KGDPTSPAVIPLSPKKAPATPVTREGAATP 1428
Query: 1103 GVAAQSPAIVAAVQGNLLPSAS-PLPDPGTPLPP-DPTAPS---PGTVTPVPPPQ 1152
+P V V P+ S P P TP DPT P+ P P P Q
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQ 1483
Score = 50.4 bits (119), Expect = 9e-06
Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL--GPSEQIGQAGSTA 1051
P LP + P P A + A PAP G+ P + P E S
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 1052 GP--------QQQQPAG-APQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
P ++ PA AP+ +PP + P P P + P+ P + S P
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPAT-PSSKEASSPP 1583
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPDPG-TPLPPDPTAPSP--GTVTPVP 1149
V + + + L+P A P P P PP T PSP G TP P
Sbjct: 1584 AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAP 1633
Score = 49.7 bits (117), Expect = 2e-05
Identities = 50/159 (31%), Positives = 60/159 (37%), Gaps = 33/159 (20%)
Query: 994 PALP-PGSQPIPPTG--AAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
PA+P P P P+ A+ PPAV A P+P PP PS
Sbjct: 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGA---PSPKELLIPPAVTSPS--------- 1609
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPA 1110
P AP P AV P P GP P+P +PP + P ++ S SPA
Sbjct: 1610 -------PKEAPTPPAVTPPSPEKGPATPAPKGTPTSPP-VTPSSLKDS------PTSPA 1655
Query: 1111 IVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
V G +P AS G P PTA V P P
Sbjct: 1656 SVTCKMGATVPQAS----KGLPAKKGPTALKEVLVAPAP 1690
Score = 47.0 bits (110), Expect = 1e-04
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 42/200 (21%)
Query: 993 PPALPP----GSQPIPPTGAAGP--PAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE 1042
PPA P G PP+ GP P+ G +PA + +P + A P G+ PS+
Sbjct: 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSK 1430
Query: 1043 -----------QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM 1091
+ +A +T+ P+ + + P V PP P P P P +Q S
Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP-PAP-KQVATSS 1488
Query: 1092 MPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTP------------------- 1132
P P + P A PA++ + + + S DP P
Sbjct: 1489 SPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEAL 1548
Query: 1133 LPPDPTAPSPGTVTPVPPPQ 1152
+PP T PSP +P P+
Sbjct: 1549 IPPAMTVPSPKKTPAIPTPK 1568
Score = 37.0 bits (84), Expect = 0.11
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 991 QPPPALPPGSQPIP---PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
QP P LPP P P P AA + +P+++ P P S G + +G A
Sbjct: 40 QPGPTLPPPCSPAPQQCPLSAANQASPF---PSPSTIASTPLEVPFPQSSSGTALPLGTA 96
Query: 1048 --GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMM---PGAVPGSG-- 1100
T P P +P A+ + P G P+ P +++ P +V S
Sbjct: 97 PEAPTFLPNLIGPPISPAALALASPMIAPTLKGT---PSSSAPLALVALAPHSVQKSSAF 153
Query: 1101 HPGVAAQSPAIVAAVQGNLLPSASPL--PDPGTPL--PPDPTAPSPGTVTPVPP 1150
P + P++ A G+++ ++P+ +P T L P P+P TP PP
Sbjct: 154 PPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNP-KGTPSPP 206
Score = 37.0 bits (84), Expect = 0.11
Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 30/177 (16%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
PP PPG++ + G + A+ +A +P +G+ A S G + + S
Sbjct: 740 PPAGTPPGTKKVD--GISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPL 797
Query: 1052 G----PQQQQP------AGAPQP-GAVPPGVPPPG----PHGPSPFPNQQTPPSMMPGAV 1096
G PQ ++P AG P G + V P P F + P+
Sbjct: 798 GVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT 857
Query: 1097 PGS--GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP--GTVTPVP 1149
P S G P +A +P L P LP TP P P P G TP P
Sbjct: 858 PPSPKGAPTPSAVTP---------LSPKGVTLPPKETPTPSVVNLPFPKEGPATPAP 905
Score = 35.8 bits (81), Expect = 0.24
Identities = 51/192 (26%), Positives = 64/192 (33%), Gaps = 39/192 (20%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVV-----PAPAGSGAPPGSLGP------ 1040
P P P S P+ P+ P +PASV P S P GP
Sbjct: 1631 PAPKGTPTSPPVTPSSLKDSPT------SPASVTCKMGATVPQASKGLPAKKGPTALKEV 1684
Query: 1041 -------SEQIGQAGSTAGPQQQQ-----PAGAPQPGAVPPGVPPPGPHGPSPF-PNQQT 1087
S I A + GPQ ++ P P P A P P+P P Q+
Sbjct: 1685 LVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKD 1744
Query: 1088 PPSMMPG-----AVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD--PTAP 1140
G + G P + S + AA +LP P PP P AP
Sbjct: 1745 SSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP 1804
Query: 1141 SPGTVTPVPPPQ 1152
SP V +PP Q
Sbjct: 1805 SP--VPTLPPKQ 1814
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 71.6 bits (174), Expect = 4e-12
Identities = 59/174 (33%), Positives = 71/174 (40%), Gaps = 26/174 (14%)
Query: 987 QQQQQPPPALPPGSQPIPPTGA--AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQI 1044
++Q QPP A+PP P P+ + GP A L AP VV P+ P G P+ Q+
Sbjct: 191 EEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQL 250
Query: 1045 G---QAGSTAGPQQQQPAGAPQP----GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP 1097
G AG + PQ+ P P GA PG P G PSP QQ+P G P
Sbjct: 251 GPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPP 310
Query: 1098 GSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPL-PPDPTAPSPGTVTPVPP 1150
P LPS P P PL PP P P+P P PP
Sbjct: 311 YPIQP----------------QLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
Score = 46.2 bits (108), Expect = 2e-04
Identities = 42/137 (30%), Positives = 49/137 (35%), Gaps = 31/137 (22%)
Query: 992 PPPALPPGSQP---------IPPTGAAGPPAVHGLAVAPA-SVVPAPAGSGAPPGSLGPS 1041
PP P SQP P GP G + +P S+ P P G P G+ GP
Sbjct: 224 PPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
Query: 1042 EQI--GQAGSTAGPQQQ-------------QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ 1086
+ G+A S PQQ QP PG P VP P+ P P P
Sbjct: 284 YPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYG 343
Query: 1087 TPPSMMPGAVPGSGHPG 1103
PP PG PG
Sbjct: 344 FPPP------PGPAWPG 354
Score = 36.2 bits (82), Expect = 0.18
Identities = 45/140 (32%), Positives = 55/140 (39%), Gaps = 20/140 (14%)
Query: 1029 AGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP----PGVP-PPGPHG---PS 1080
AG PP P + Q +Q QP A P +P P +P P HG P+
Sbjct: 167 AGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALPPA 226
Query: 1081 PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPL----PP 1135
PFP + PS G + G +P A P A + S P P PGTP+ P
Sbjct: 227 PFP-VVSQPSFYSGPL-GPTYP-AAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPG 283
Query: 1136 DP----TAPSPGTVTPVPPP 1151
P APSPG P P
Sbjct: 284 YPLRGGRAPSPGYPQQSPYP 303
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 70.5 bits (171), Expect = 9e-12
Identities = 61/173 (35%), Positives = 66/173 (38%), Gaps = 22/173 (12%)
Query: 989 QQQPPPALPPGSQPIPPT----GAAGPPAVHGLA--VAPASVVPAPAGSGAP--PGSLGP 1040
Q P P PG Q P G GPP + GL + P G P PG LGP
Sbjct: 422 QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
G+ G Q P G P G + PPG GP P PP PG G
Sbjct: 482 K---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGF-----PGIG 533
Query: 1101 HPGVAA-QSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
PGVA P G L P P PG P PP P P P + P PPPQ
Sbjct: 534 KPGVAGLHGP---PGKPGALGPQGQP-GLPGPPGPPGPPGP-PAVMPPTPPPQ 581
Score = 58.5 bits (140), Expect = 3e-08
Identities = 57/189 (30%), Positives = 70/189 (37%), Gaps = 30/189 (15%)
Query: 991 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QP P G + +P P G GP G + A V P G PPG +G +G+ G
Sbjct: 218 QPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVG-LPGVGKPGV 276
Query: 1050 TAGPQQQQPAGAP----QPGAV----------PPGVPPPGPHGPSPFPNQQTPPSMM--- 1092
T P Q P G P +PG PPG+P G G P Q P
Sbjct: 277 TGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQ 336
Query: 1093 -------PGAVPGSGHPGV-AAQSPAIVAAVQGNLLP--SASPLPDPGTPLPPDPTAPSP 1142
P +PG G PG + + V G L P P+ PG PP P
Sbjct: 337 GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPG-LP 395
Query: 1143 GTVTPVPPP 1151
G P+ PP
Sbjct: 396 GIPGPMGPP 404
Score = 53.5 bits (127), Expect = 1e-06
Identities = 51/182 (28%), Positives = 62/182 (34%), Gaps = 23/182 (12%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG---PSEQIGQA 1047
+P P PPG +P G G G P P G PG++G +IGQ
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-------PGVP----PPGPHGPSPFPNQQ-------TPP 1089
G P G P P +P PG+P P G GP P Q
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG 244
Query: 1090 SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
MPGA G PG+ P + G P + P P PL PG P+
Sbjct: 245 FGMPGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIG 302
Query: 1150 PP 1151
P
Sbjct: 303 VP 304
Score = 50.1 bits (118), Expect = 1e-05
Identities = 49/147 (33%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Query: 988 QQQQPPPALPP---GSQPIPPTGAAGP---PAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
Q Q PP +P S PI P G GP P + G P P AG PPG G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGAL 550
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-GPHGPS-PFPNQQTPPSMMPGAVPGS 1099
GQ G P P G P P AV P PPP G + P P GA G
Sbjct: 551 GPQGQPGLPGPPG---PPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGK 607
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPL 1126
+ G A + PA A + P +P+
Sbjct: 608 -NGGPAYEMPAFTAELTAPFPPVGAPV 633
Score = 45.8 bits (107), Expect = 2e-04
Identities = 44/158 (27%), Positives = 54/158 (34%), Gaps = 14/158 (8%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
P P G G GPP + G+ G G PG+LGP G+ G P
Sbjct: 327 PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPR---GEKGPIGAP 383
Query: 1054 QQQQPAGAPQPGAVPPGVPP------PGPHGPSPFPNQQTPPSMM--PGAVPGSGHPGVA 1105
P G P +P + P PGP G Q PP PG G PG
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443
Query: 1106 AQ-SPAIVAAVQGNLLP--SASPLPDPGTPLPPDPTAP 1140
+ P + + G + P A PG P P P
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Score = 32.3 bits (72), Expect = 2.7
Identities = 49/180 (27%), Positives = 61/180 (33%), Gaps = 25/180 (13%)
Query: 991 QPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAP--PGSLGPSEQIG 1045
Q PP +PP P G P A GLA+ + G P P + +
Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGK-EMPHLQYGKEYPHLPQYMKEIQPAP 97
Query: 1046 QAGSTAGPQ------------QQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSM 1091
+ G A P+ +Q P G P P P PG+P G G P Q P +
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 1092 MPGAVPG-SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
+PG G PG A Q P+ PG PP P PG P P
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKG---EIGPMGIPGPQGPPGPHG-LPGIGKPGGP 213
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 70.5 bits (171), Expect = 9e-12
Identities = 61/173 (35%), Positives = 66/173 (38%), Gaps = 22/173 (12%)
Query: 989 QQQPPPALPPGSQPIPPT----GAAGPPAVHGLA--VAPASVVPAPAGSGAP--PGSLGP 1040
Q P P PG Q P G GPP + GL + P G P PG LGP
Sbjct: 422 QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
G+ G Q P G P G + PPG GP P PP PG G
Sbjct: 482 K---GEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGF-----PGIG 533
Query: 1101 HPGVAA-QSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
PGVA P G L P P PG P PP P P P + P PPPQ
Sbjct: 534 KPGVAGLHGP---PGKPGALGPQGQP-GLPGPPGPPGPPGP-PAVMPPTPPPQ 581
Score = 58.5 bits (140), Expect = 3e-08
Identities = 57/189 (30%), Positives = 70/189 (37%), Gaps = 30/189 (15%)
Query: 991 QPPPALPPGSQPIP-PTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QP P G + +P P G GP G + A V P G PPG +G +G+ G
Sbjct: 218 QPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVG-LPGVGKPGV 276
Query: 1050 TAGPQQQQPAGAP----QPGAV----------PPGVPPPGPHGPSPFPNQQTPPSMM--- 1092
T P Q P G P +PG PPG+P G G P Q P
Sbjct: 277 TGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQ 336
Query: 1093 -------PGAVPGSGHPGV-AAQSPAIVAAVQGNLLP--SASPLPDPGTPLPPDPTAPSP 1142
P +PG G PG + + V G L P P+ PG PP P
Sbjct: 337 GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPG-LP 395
Query: 1143 GTVTPVPPP 1151
G P+ PP
Sbjct: 396 GIPGPMGPP 404
Score = 53.5 bits (127), Expect = 1e-06
Identities = 51/182 (28%), Positives = 62/182 (34%), Gaps = 23/182 (12%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLG---PSEQIGQA 1047
+P P PPG +P G G G P P G PG++G +IGQ
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 1048 GSTAGPQQQQPAGAPQPGAVP-------PGVP----PPGPHGPSPFPNQQ-------TPP 1089
G P G P P +P PG+P P G GP P Q
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG 244
Query: 1090 SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
MPGA G PG+ P + G P + P P PL PG P+
Sbjct: 245 FGMPGAPGVKGPPGM--HGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIG 302
Query: 1150 PP 1151
P
Sbjct: 303 VP 304
Score = 50.1 bits (118), Expect = 1e-05
Identities = 49/147 (33%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Query: 988 QQQQPPPALPP---GSQPIPPTGAAGP---PAVHGLAVAPASVVPAPAGSGAPPGSLGPS 1041
Q Q PP +P S PI P G GP P + G P P AG PPG G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGAL 550
Query: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-GPHGPS-PFPNQQTPPSMMPGAVPGS 1099
GQ G P P G P P AV P PPP G + P P GA G
Sbjct: 551 GPQGQPGLPGPPG---PPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGK 607
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPL 1126
+ G A + PA A + P +P+
Sbjct: 608 -NGGPAYEMPAFTAELTAPFPPVGAPV 633
Score = 45.8 bits (107), Expect = 2e-04
Identities = 44/158 (27%), Positives = 54/158 (34%), Gaps = 14/158 (8%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
P P G G GPP + G+ G G PG+LGP G+ G P
Sbjct: 327 PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPR---GEKGPIGAP 383
Query: 1054 QQQQPAGAPQPGAVPPGVPP------PGPHGPSPFPNQQTPPSMM--PGAVPGSGHPGVA 1105
P G P +P + P PGP G Q PP PG G PG
Sbjct: 384 GIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443
Query: 1106 AQ-SPAIVAAVQGNLLP--SASPLPDPGTPLPPDPTAP 1140
+ P + + G + P A PG P P P
Sbjct: 444 GEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGP 481
Score = 32.3 bits (72), Expect = 2.7
Identities = 49/180 (27%), Positives = 61/180 (33%), Gaps = 25/180 (13%)
Query: 991 QPPPALPPGSQPIPPTGAAGPP---AVHGLAVAPASVVPAPAGSGAP--PGSLGPSEQIG 1045
Q PP +PP P G P A GLA+ + G P P + +
Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGK-EMPHLQYGKEYPHLPQYMKEIQPAP 97
Query: 1046 QAGSTAGPQ------------QQQPAGAPQPGAVP--PGVPPPGPHGPSPFPNQQTPPSM 1091
+ G A P+ +Q P G P P P PG+P G G P Q P +
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 1092 MPGAVPG-SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
+PG G PG A Q P+ PG PP P PG P P
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKG---EIGPMGIPGPQGPPGPHG-LPGIGKPGGP 213
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 69.7 bits (169), Expect = 2e-11
Identities = 60/187 (32%), Positives = 70/187 (37%), Gaps = 30/187 (16%)
Query: 990 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1036
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1037 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQT-------- 1087
GP++ Q T P QQP G P P P P GP P QQ
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQP-GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1088 ------PPSMMPG-AVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
PPS +PG A P PG A P + + S P P P P P+
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1141 SPGTVTP 1147
PG+ P
Sbjct: 523 QPGSTKP 529
Score = 65.1 bits (157), Expect = 4e-10
Identities = 62/190 (32%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Query: 990 QQPPPALPPGSQP---IPPTGAAGPPA-----VHGLAVAPASVVPA--PAGSGAPPGS-L 1038
QQP P PP QP G A PPA LA P +V P P G+ PP L
Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366
Query: 1039 GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PPPGPHGP------SPFPNQQT 1087
GP++ Q + P +QP P+ A PPGV PGP P +P P Q
Sbjct: 367 GPAKPPAQQTGSEKPSSEQPG--PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 1088 PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD----PTAPSPG 1143
P P PG V P + A Q P + G PP P P P
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG--PGKTSAQQTGPTKPPSQLPGPAKPPPQ 482
Query: 1144 TVTPV-PPPQ 1152
P PPPQ
Sbjct: 483 QPGPAKPPPQ 492
Score = 63.9 bits (154), Expect = 8e-10
Identities = 58/182 (31%), Positives = 67/182 (36%), Gaps = 29/182 (15%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASV-----------VPAP-AGSGA---- 1033
QQP PA PP Q P A P + A AP +PA AG G
Sbjct: 403 QQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1034 ------PPGSL-GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-PPPGPHGPSPFPNQ 1085
PP L GP++ Q A P QQP A P P PPP GP+ Q
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1086 QTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTV 1145
Q + P PGS P SPA +A Q S P+ G+ P P SP
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-----STKPVSQTGSGKPLQPPTVSPSAK 577
Query: 1146 TP 1147
P
Sbjct: 578 QP 579
Score = 60.1 bits (144), Expect = 1e-08
Identities = 62/204 (30%), Positives = 73/204 (35%), Gaps = 46/204 (22%)
Query: 992 PPPALPPGSQPIP-------------PTGAAGPPA-----VHGLAVAPASVVP--APAGS 1031
P P+ PP QP P G A PPA LA P +V P P G+
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 1032 GAPPGS-LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PPPGPHGP------ 1079
PP LGP++ Q + P +QP P+ A PPGV PGP P
Sbjct: 359 TKPPAQPLGPAKPPAQQTGSEKPSSEQP--GPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 1080 SPFPNQQTP----------PSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDP 1129
+P P Q P P+ P PG G P +A Q S LP P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 1130 GTPLP--PDPTAPSPGTVTPVPPP 1151
P P P P P P PP
Sbjct: 477 AKPPPQQPGPAKPPPQQPGSAKPP 500
Score = 52.4 bits (124), Expect = 2e-06
Identities = 53/160 (33%), Positives = 60/160 (37%), Gaps = 39/160 (24%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QQP PA PP QP G+A PP+ P S P P PG PS Q Q GS
Sbjct: 482 QQPGPAKPPPQQP----GSAKPPSQQ-----PGSTKPPP----QQPGPAKPSPQ--QPGS 526
Query: 1050 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSP 1109
T P Q QPG+ P P P PS S P + GSG P Q P
Sbjct: 527 TKPPSQ-------QPGSAKPSAQQPSPAKPS------AQQSTKPVSQTGSGKP---LQPP 570
Query: 1110 AIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
+ PSA P G P P + + VP
Sbjct: 571 TV--------SPSAKQPPSQGLPKTICPLCNTTELLLHVP 602
Score = 40.8 bits (94), Expect = 0.007
Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1081 PFPNQQTP-PSMMPGAVPGSGHPGVAAQSPAI--------VAAVQGNLLPSASPLPDPGT 1131
P P +P P+++P P V +P A ++ N LP
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASP-VTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPP 2484
Query: 1132 PLPPDPTA-PSPGTVTPVPPP 1151
P+PP P++ PS T P P
Sbjct: 2485 PVPPKPSSIPSGLVFTHRPEP 2505
Score = 40.0 bits (92), Expect = 0.013
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 15/167 (8%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP--------GSLGPSE 1042
QPPP PP P PP PP + +++P + A P ++ E
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG---PHGPSPFPNQQTPPSMMPGAVPGS 1099
S P + AP P P P G H P P P ++P +
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTT 2523
Query: 1100 GHPGVAAQSP---AIVAAVQGNLLPSAS-PLPDPGTPLPPDPTAPSP 1142
P P ++ +++ NL+ SA LP P +PL P SP
Sbjct: 2524 QKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSP 2570
Score = 38.1 bits (87), Expect = 0.049
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 984 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1041 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1093
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Score = 33.9 bits (76), Expect = 0.92
Identities = 39/150 (26%), Positives = 51/150 (34%), Gaps = 27/150 (18%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP----------- 1069
P+SV+ P E GQ P Q P+G+P ++P
Sbjct: 2344 PSSVIALPMKEQLSTTYFTSGETFGQEK----PASQLPSGSPSVSSLPAKPRPFFRSSSL 2399
Query: 1070 --GVPPPGPHGPSPFPNQQTPPSMMPG-AVPGSGHPGVAAQSPAIVAAVQGNLLPSASPL 1126
PP P P P P PP P P S P + + VA+ + +A+PL
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTATPL 2455
Query: 1127 PDPGTPLPPDPTAPSPG-----TVTPVPPP 1151
D T L S G T PPP
Sbjct: 2456 FDAVTTLETTAVLRSNGLPVTRICTTAPPP 2485
Score = 32.3 bits (72), Expect = 2.7
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 717 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 773
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 774 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 816
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 817 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 859
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
Score = 31.2 bits (69), Expect = 5.9
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 1085 QQTPPSMMPGAVPG----SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
Q+ P S +P P P +S ++ + Q P P P P P PP P P
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428
Query: 1141 SPGTVTPVPPPQ 1152
P + P P+
Sbjct: 2429 PPTSPKPTILPK 2440
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 69.7 bits (169), Expect = 2e-11
Identities = 60/187 (32%), Positives = 70/187 (37%), Gaps = 30/187 (16%)
Query: 990 QQP----PPALPPGSQ--PIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------- 1036
QQP PP PPG+ P P G A PPA + P+S P P PPG
Sbjct: 344 QQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQ 403
Query: 1037 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVP-PGVPPPGPHGPSPFPNQQT-------- 1087
GP++ Q T P QQP G P P P P GP P QQ
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQQP-GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1088 ------PPSMMPG-AVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
PPS +PG A P PG A P + + S P P P P P+
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1141 SPGTVTP 1147
PG+ P
Sbjct: 523 QPGSTKP 529
Score = 65.1 bits (157), Expect = 4e-10
Identities = 62/190 (32%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Query: 990 QQPPPALPPGSQP---IPPTGAAGPPA-----VHGLAVAPASVVPA--PAGSGAPPGS-L 1038
QQP P PP QP G A PPA LA P +V P P G+ PP L
Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366
Query: 1039 GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PPPGPHGP------SPFPNQQT 1087
GP++ Q + P +QP P+ A PPGV PGP P +P P Q
Sbjct: 367 GPAKPPAQQTGSEKPSSEQPG--PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 1088 PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD----PTAPSPG 1143
P P PG V P + A Q P + G PP P P P
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG--PGKTSAQQTGPTKPPSQLPGPAKPPPQ 482
Query: 1144 TVTPV-PPPQ 1152
P PPPQ
Sbjct: 483 QPGPAKPPPQ 492
Score = 63.9 bits (154), Expect = 8e-10
Identities = 58/182 (31%), Positives = 67/182 (36%), Gaps = 29/182 (15%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASV-----------VPAP-AGSGA---- 1033
QQP PA PP Q P A P + A AP +PA AG G
Sbjct: 403 QQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQ 462
Query: 1034 ------PPGSL-GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-PPPGPHGPSPFPNQ 1085
PP L GP++ Q A P QQP A P P PPP GP+ Q
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 1086 QTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTV 1145
Q + P PGS P SPA +A Q S P+ G+ P P SP
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-----STKPVSQTGSGKPLQPPTVSPSAK 577
Query: 1146 TP 1147
P
Sbjct: 578 QP 579
Score = 60.1 bits (144), Expect = 1e-08
Identities = 62/204 (30%), Positives = 73/204 (35%), Gaps = 46/204 (22%)
Query: 992 PPPALPPGSQPIP-------------PTGAAGPPA-----VHGLAVAPASVVP--APAGS 1031
P P+ PP QP P G A PPA LA P +V P P G+
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT 358
Query: 1032 GAPPGS-LGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PPPGPHGP------ 1079
PP LGP++ Q + P +QP P+ A PPGV PGP P
Sbjct: 359 TKPPAQPLGPAKPPAQQTGSEKPSSEQP--GPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Query: 1080 SPFPNQQTP----------PSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDP 1129
+P P Q P P+ P PG G P +A Q S LP P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 1130 GTPLP--PDPTAPSPGTVTPVPPP 1151
P P P P P P PP
Sbjct: 477 AKPPPQQPGPAKPPPQQPGSAKPP 500
Score = 52.4 bits (124), Expect = 2e-06
Identities = 53/160 (33%), Positives = 60/160 (37%), Gaps = 39/160 (24%)
Query: 990 QQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGS 1049
QQP PA PP QP G+A PP+ P S P P PG PS Q Q GS
Sbjct: 482 QQPGPAKPPPQQP----GSAKPPSQQ-----PGSTKPPP----QQPGPAKPSPQ--QPGS 526
Query: 1050 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSP 1109
T P Q QPG+ P P P PS S P + GSG P Q P
Sbjct: 527 TKPPSQ-------QPGSAKPSAQQPSPAKPS------AQQSTKPVSQTGSGKP---LQPP 570
Query: 1110 AIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
+ PSA P G P P + + VP
Sbjct: 571 TV--------SPSAKQPPSQGLPKTICPLCNTTELLLHVP 602
Score = 40.8 bits (94), Expect = 0.007
Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 17/141 (12%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS 1080
PAS +P SG+P S P++ S++ QP P P PP PPP P P
Sbjct: 2372 PASQLP----SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPP 2425
Query: 1081 PFPNQQTP-PSMMPGAVPGSGHPGVAAQSPAI--------VAAVQGNLLPSASPLPDPGT 1131
P P +P P+++P P V +P A ++ N LP
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASP-VTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPP 2484
Query: 1132 PLPPDPTA-PSPGTVTPVPPP 1151
P+PP P++ PS T P P
Sbjct: 2485 PVPPKPSSIPSGLVFTHRPEP 2505
Score = 40.0 bits (92), Expect = 0.013
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 15/167 (8%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP--------GSLGPSE 1042
QPPP PP P PP PP + +++P + A P ++ E
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLE 2463
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG---PHGPSPFPNQQTPPSMMPGAVPGS 1099
S P + AP P P P G H P P P ++P +
Sbjct: 2464 TTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTT 2523
Query: 1100 GHPGVAAQSP---AIVAAVQGNLLPSAS-PLPDPGTPLPPDPTAPSP 1142
P P ++ +++ NL+ SA LP P +PL P SP
Sbjct: 2524 QKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSP 2570
Score = 38.1 bits (87), Expect = 0.049
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 984 QMHQQQQQPPPALPPGSQP---IPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +++ PP ++P PPTG P + +P PA GP
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPF-------DSKAIPRPASDSKIISHPGP 836
Query: 1041 S------EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP-PSMMP 1093
S +Q+ P++ Q +P+P A P P P GP P Q P P P
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSP 896
Score = 33.9 bits (76), Expect = 0.92
Identities = 39/150 (26%), Positives = 51/150 (34%), Gaps = 27/150 (18%)
Query: 1021 PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP----------- 1069
P+SV+ P E GQ P Q P+G+P ++P
Sbjct: 2344 PSSVIALPMKEQLSTTYFTSGETFGQEK----PASQLPSGSPSVSSLPAKPRPFFRSSSL 2399
Query: 1070 --GVPPPGPHGPSPFPNQQTPPSMMPG-AVPGSGHPGVAAQSPAIVAAVQGNLLPSASPL 1126
PP P P P P PP P P S P + + VA+ + +A+PL
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTATPL 2455
Query: 1127 PDPGTPLPPDPTAPSPG-----TVTPVPPP 1151
D T L S G T PPP
Sbjct: 2456 FDAVTTLETTAVLRSNGLPVTRICTTAPPP 2485
Score = 32.3 bits (72), Expect = 2.7
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 717 PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAG--- 773
P S E+ + E + + E +++ +E K T K D + SS
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKDTFKKDSQQDIPSSKDHKEKS 1497
Query: 774 ------TTSDEP-ERIEESGNDE----------ARVEGQATDEKKEPKEPREGGGAIEEE 816
TT EP + +EES E V ++DE K+ E +G G E+
Sbjct: 1498 EFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEYKQ--EDSQGSGEEEDF 1555
Query: 817 AKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPK 859
+++ E ++ G E D ++ + + +K++E K
Sbjct: 1556 IRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETK 1598
Score = 31.2 bits (69), Expect = 5.9
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 1085 QQTPPSMMPGAVPG----SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP 1140
Q+ P S +P P P +S ++ + Q P P P P P PP P P
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428
Query: 1141 SPGTVTPVPPPQ 1152
P + P P+
Sbjct: 2429 PPTSPKPTILPK 2440
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 69.3 bits (168), Expect = 2e-11
Identities = 105/475 (22%), Positives = 171/475 (36%), Gaps = 70/475 (14%)
Query: 731 FSKMKEEVPTALVEAHVRKVEEAAKVTG---KADPAFGLESSGIAGTTSDEPERIEE--- 784
F+KM +E +V V KV +D + S + T E ER +
Sbjct: 454 FAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAE 513
Query: 785 ---------------SGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDE 829
S + + + + D+K++ KE + +EE K K E P K
Sbjct: 514 LQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKT 573
Query: 830 EKGKEGDS-----EKESEKSDGDPIVDPEKEKEPK----EGQEEVLKEVVESEGERKTKV 880
+K +S E KS P + E+E + K E + ++ ++ + GE+ +V
Sbjct: 574 KKNNSSNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRV 633
Query: 881 ERDIG--EGNLSTAAAAALAAAAVKAKHLAAVE-ERKIKSLVALLVETQMKKLEI----- 932
I E +L + + K E ER + S + + Q +K+++
Sbjct: 634 VHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSS 693
Query: 933 KLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQP 992
K++ F E+ E + + + ++ + + K R +++H HQQ QQ
Sbjct: 694 KMKGFSSSESESSSESSSSDSED----SETEMAPKSKKKGHPGREQKKHHHHHHQQMQQA 749
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVP--------APAGSGAPPGSLGPSEQI 1044
P +P QP PP PP P P APA +PP + +
Sbjct: 750 PAPVP--QQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPV 807
Query: 1045 ------GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQ--TPPSMMPGAV 1096
G G Q PQP +PP +P P H P NQ P + A+
Sbjct: 808 LEPQLPGSVFDPIGHFTQPILHLPQP-ELPPHLPQPPEHSTPPHLNQHAVVSPPALHNAL 866
Query: 1097 P---------GSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1142
P + P A+ PA+ A+ L P+ P L D P+P
Sbjct: 867 PQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAP 921
Score = 40.8 bits (94), Expect = 0.007
Identities = 39/148 (26%), Positives = 52/148 (35%), Gaps = 13/148 (8%)
Query: 1016 GLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPG 1075
G A S VP + PP + P +T P V VPP
Sbjct: 187 GTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQP 246
Query: 1076 PHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQG-------NLLPSASPLPD 1128
P P P Q PP P P HP + A +P V +G + P+ +
Sbjct: 247 LQTPPPVPPQPQPPPA-PAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHE 305
Query: 1129 PGTPLPPDPTAPSPG----TVTPVPPPQ 1152
P + LPP+P G + PV PP+
Sbjct: 306 PPS-LPPEPKTTKLGQRRESSRPVKPPK 332
Score = 40.4 bits (93), Expect = 0.010
Identities = 55/212 (25%), Positives = 70/212 (33%), Gaps = 41/212 (19%)
Query: 981 HFQQ--MHQQQQQPPPALP-PGSQPIPPT----GAAGPPAVHG-LAVAP-------ASVV 1025
HF Q +H Q + PP LP P PP PPA+H L P A++
Sbjct: 822 HFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALP 881
Query: 1026 PAPAGSGAPPGSLGPSEQIGQAGSTAGPQ----QQQPAGAP-----------QPGAVPPG 1070
P PA A +L + + Q PQ ++P P Q V P
Sbjct: 882 PKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPP 941
Query: 1071 VP----------PPGPHGPSPFPN-QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNL 1119
P PP P P P P+ QQ P P P Q V
Sbjct: 942 TPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQP 1001
Query: 1120 LPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1151
+ ++ + P P P P PG P P P
Sbjct: 1002 MQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQP 1033
Score = 38.9 bits (89), Expect = 0.028
Identities = 42/155 (27%), Positives = 50/155 (32%), Gaps = 26/155 (16%)
Query: 981 HFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
H Q QQQPPP PP QP P PP P L P
Sbjct: 963 HPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR---------------------PVHLQP 1001
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
+ PQ QQP P PG P PPP P P P +G
Sbjct: 1002 MQFSTHIQQPPPPQGQQPP-HPPPGQQP---PPPQPAKPQQVIQHHHSPRHHKSDPYSTG 1057
Query: 1101 HPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP 1135
H A SP ++ + Q + S + P + P
Sbjct: 1058 HLR-EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQP 1091
Score = 38.5 bits (88), Expect = 0.037
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 846 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA-----LAAA 900
G P++ P ++ P G + K+ + E + ++D+ N+ + A+ ++
Sbjct: 1158 GRPVIRPPEQNAPPPGAPD--KDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSS 1215
Query: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K+ + + R+ A E + K L+ + H E +E+E L +R +
Sbjct: 1216 TAKSSSDSFEQFRR----AAREKEEREKALKAQAEHAE-------KEKERLRQERMRSRE 1264
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ 991
D A + + E R RQ+ QQ Q+QQQ
Sbjct: 1265 DEDALEQARRAHEEARRRQEQQQQQRQEQQQ 1295
Score = 37.7 bits (86), Expect = 0.063
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 1060 GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIV-AAVQGN 1118
G + G PGV + P Q P P V + HP A IV V
Sbjct: 182 GRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTV 241
Query: 1119 LLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
+ P P P P P P AP+P V PP
Sbjct: 242 VPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPP 273
Score = 37.7 bits (86), Expect = 0.063
Identities = 58/208 (27%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 955 RQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAV 1014
+QQ + H++ ++++ H QQ Q Q PP PPG QP PP A P V
Sbjct: 987 QQQHQPPPRPVHLQPMQFST------HIQQPPPPQGQQPPHPPPGQQP-PPPQPAKPQQV 1039
Query: 1015 HGLAVAPASVVPAPAGSG----APPGSLGPSEQIGQAGS---------TAGPQQQQPAGA 1061
+P P +G AP + S Q+ Q S P++Q+ A
Sbjct: 1040 IQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAA 1099
Query: 1062 ----PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQG 1117
PQP V V H P ++ PS+ P HP +I A V
Sbjct: 1100 SVVQPQPLVV---VKEEKIHSPI-IRSEPFSPSLRP---EPPKHP------ESIKAPVHL 1146
Query: 1118 NLLPSASPLPDPGTPL--PPDPTAPSPG 1143
P P+ D G P+ PP+ AP PG
Sbjct: 1147 PQRPEMKPV-DVGRPVIRPPEQNAPPPG 1173
Score = 36.6 bits (83), Expect = 0.14
Identities = 47/172 (27%), Positives = 54/172 (31%), Gaps = 40/172 (23%)
Query: 992 PPPALPPGSQP-------IPPTGAAGPPAVHGLAVAPASVVPAPAGSGA----------- 1033
P PA PP P +P A PP V + PAP +
Sbjct: 882 PKPARPPAVSPALTQTPLLPQPPMAQPPQV----LLEDEEPPAPPLTSMQMQLYLQQLQK 937
Query: 1034 --PPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSM 1091
PP L PS ++ P P+ Q PP PPP P P P QQ P
Sbjct: 938 VQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPP---PQQQHQPPP 994
Query: 1092 MPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSAS--PLPDPG-TPLPPDPTAP 1140
P V Q +Q P P P PG P PP P P
Sbjct: 995 RP----------VHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKP 1036
Score = 30.8 bits (68), Expect = 7.8
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 282 NSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTK 341
N P +DKK +K KR E KK AK+ P K+ + +++
Sbjct: 534 NKPKKKEKDKKEKKKEKHKRK---EEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAP 590
Query: 342 DMDEPSPVPNVEEVTLPKTVNTKK------DSESAP-VKGGTMTDLDEQEDESMETTGKD 394
+P P EE K ++ ++ D P K G + + + + S++ + D
Sbjct: 591 MKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPD 650
Query: 395 EDE 397
E E
Sbjct: 651 EIE 653
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 68.9 bits (167), Expect = 3e-11
Identities = 78/290 (26%), Positives = 113/290 (38%), Gaps = 54/290 (18%)
Query: 903 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 467 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 523
Query: 961 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 1008
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 524 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 582
Query: 1009 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA------------- 1051
+G PP G + P P P PG + S G TA
Sbjct: 583 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 642
Query: 1052 --GPQQQQPAGAPQPGAVPPG--VPPPGP-HGPSPFPNQQTPPSMMPGAV----PGSGHP 1102
P + G P P ++P G +PPP P G + P PP +PG+ P P
Sbjct: 643 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP---PPPPPLPGSAGIPPPPPPLP 699
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPSPGTVTPVPPP 1151
G A P G +P P P PG P PP PG P PPP
Sbjct: 700 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP------PGMGMPPPPP 743
Score = 68.2 bits (165), Expect = 4e-11
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 28/254 (11%)
Query: 910 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 969
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 460 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 518
Query: 970 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 1024
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 519 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 578
Query: 1025 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG-----P 1079
+P +G+ PP G + + P P P PG V PP P G P
Sbjct: 579 LPGDSGTIIPPPPAP-----GDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 633
Query: 1080 SPFPNQQT--PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDP 1137
P T PP +P GV SP+ + G +P PLP PP P
Sbjct: 634 PPLSGDATIPPPPPLP--------EGVGIPSPSSLPG--GTAIPPPPPLPGSARIPPPPP 683
Query: 1138 TAPSPGTVTPVPPP 1151
P + P PPP
Sbjct: 684 PLPGSAGIPPPPPP 697
Score = 53.9 bits (128), Expect = 9e-07
Identities = 54/166 (32%), Positives = 60/166 (36%), Gaps = 25/166 (15%)
Query: 992 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1044
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 608 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 666
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
G + P P PG+ PPP G + P PP +PG PG P
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMP---PPPPPLPGG-PGIPPPPP 722
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
P I P P PG +PP P PV P
Sbjct: 723 FPGGPGI-------------PPPPPGMGMPPPPPFGFGVPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 68.9 bits (167), Expect = 3e-11
Identities = 78/290 (26%), Positives = 113/290 (38%), Gaps = 54/290 (18%)
Query: 903 KAKHLAAVEERKIKSLVALLVETQ--MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
K++ AA E+K+ S + E Q MKK+E FE+ + E++AL ++QQ+
Sbjct: 476 KSEAKAAELEKKLDSELTARHELQVEMKKME---SDFEQKLQDLQGEKDALHSEKQQIAT 532
Query: 961 DRQAFHMEQLKYA--------EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPT----GA 1008
++Q E + E+ ++ + PP++P + P+PP G
Sbjct: 533 EKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA-PVPPAPPLPGD 591
Query: 1009 AG----PPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA------------- 1051
+G PP G + P P P PG + S G TA
Sbjct: 592 SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI 651
Query: 1052 --GPQQQQPAGAPQPGAVPPG--VPPPGP-HGPSPFPNQQTPPSMMPGAV----PGSGHP 1102
P + G P P ++P G +PPP P G + P PP +PG+ P P
Sbjct: 652 PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP---PPPPPLPGSAGIPPPPPPLP 708
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPSPGTVTPVPPP 1151
G A P G +P P P PG P PP PG P PPP
Sbjct: 709 GEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP------PGMGMPPPPP 752
Score = 68.2 bits (165), Expect = 4e-11
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 28/254 (11%)
Query: 910 VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQ 969
+++ K++ A E + KKL+ +L EL+ M + E + Q L ++ A H E+
Sbjct: 469 IDKTKVEKSEAKAAELE-KKLDSELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEK 527
Query: 970 LKYA-EMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAG---PPAVHGLA-VAPASV 1024
+ A E + + Q+ + + L + + AA PP+V A V PA
Sbjct: 528 QQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPP 587
Query: 1025 VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG-----P 1079
+P +G+ PP G + + P P P PG V PP P G P
Sbjct: 588 LPGDSGTIIPPPPAP-----GDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 642
Query: 1080 SPFPNQQT--PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDP 1137
P T PP +P GV SP+ + G +P PLP PP P
Sbjct: 643 PPLSGDATIPPPPPLP--------EGVGIPSPSSLPG--GTAIPPPPPLPGSARIPPPPP 692
Query: 1138 TAPSPGTVTPVPPP 1151
P + P PPP
Sbjct: 693 PLPGSAGIPPPPPP 706
Score = 53.9 bits (128), Expect = 9e-07
Identities = 54/166 (32%), Positives = 60/166 (36%), Gaps = 25/166 (15%)
Query: 992 PPPALPPG----SQPIPPTGAA--GPPAVHGLAVAPASVVPAPAGSGAP-PGSLGPSEQI 1044
PPP LP G S P P G A PP + G A P P P G G P P SL I
Sbjct: 617 PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPP-PLPEGVGIPSPSSLPGGTAI 675
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
G + P P PG+ PPP G + P PP +PG PG P
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMP---PPPPPLPGG-PGIPPPPP 731
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
P I P P PG +PP P PV P
Sbjct: 732 FPGGPGI-------------PPPPPGMGMPPPPPFGFGVPAAPVLP 764
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 68.6 bits (166), Expect = 3e-11
Identities = 56/169 (33%), Positives = 63/169 (37%), Gaps = 24/169 (14%)
Query: 992 PPPALPPG-SQPIPPTGAAGPPAVHGLAVAPASVVPAPA------GSGAPPGSLGPSEQI 1044
PPP P G + P PP G GPP G P V+P P G PP L P +
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPPG-PPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
Query: 1045 GQ---AGSTAGPQQQQPAGAPQPGAVPP--------GVPPPGPHGPSPFPNQQTPPSMMP 1093
GQ GP P P PG PP G PP P GP P PP +P
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP 344
Query: 1094 GAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1142
G PG+ P +P + A S P D P P DP P
Sbjct: 345 GPPPGAPPP-----APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPP 388
Score = 65.1 bits (157), Expect = 4e-10
Identities = 55/174 (31%), Positives = 63/174 (36%), Gaps = 31/174 (17%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
P A+P G + P G GPP P P G PPG P + + AG
Sbjct: 208 PGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL--PPPLAG 265
Query: 1053 PQQQ------------QPAGAPQPGAVPPGVPPPGP-HGPSPFPNQQTPPSMMPGAVPGS 1099
P + QP G P G +PPG PPP P +GP P P PP P PG
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP---PPPQQGPPPPPGP 322
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPV--PPP 1151
P G L P + P P P PP P V P PPP
Sbjct: 323 FPP-----------RPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPP 365
Score = 62.0 bits (149), Expect = 3e-09
Identities = 53/150 (35%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGA--PQP 1064
G AGPP A P G G PG++ ++ GP PAG P+P
Sbjct: 184 GKAGPPGGSSRAAFPQG----GRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
Query: 1065 GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSAS 1124
PPG PPGP GP P P Q PP P +G P + P V L P
Sbjct: 240 PLGPPG--PPGPPGPPP-PGQVLPP-------PLAGPPNRGDRPPPPV------LFPGQP 283
Query: 1125 PLPDPGTPLPPDPTAPSPGTVTP--VPPPQ 1152
P PLPP P P PG P PPPQ
Sbjct: 284 FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQ 313
Score = 38.9 bits (89), Expect = 0.028
Identities = 36/113 (31%), Positives = 40/113 (35%), Gaps = 25/113 (22%)
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS- 1099
S + Q+G +G + P G A P G G F PGAVPG
Sbjct: 171 SRKTTQSGQMSGEGKAGPPGGSSRAAFPQG-----GRGRGRF----------PGAVPGGD 215
Query: 1100 ---GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVP 1149
G G P A P PL PG P PP P P PG V P P
Sbjct: 216 RFPGPAGPGGPPPPFPA----GQTPPRPPLGPPGPPGPPGP--PPPGQVLPPP 262
>gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]
Length = 828
Score = 68.2 bits (165), Expect = 4e-11
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 37/208 (17%)
Query: 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ 383
++KS RG + E++D T E +TL + D +S +L++Q
Sbjct: 272 FSKSSRGCLQNEKQDETLSSSE---------ITLWTEKQSNGDKKSI--------ELNDQ 314
Query: 384 EDESMETTGKDEDENSTGNKGEQTKNPD--------------LHEDNVTEQTHH---III 426
+ + D Q +P+ H + E++H +
Sbjct: 315 KFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKP 374
Query: 427 PSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC 486
P D N + E++A+PEFF G+ ++KTPE YL RN+++D + + +YL T+
Sbjct: 375 PEQEIEIDRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSV 433
Query: 487 RRNL--AGDVCAIMRVHAFLEQWGLINY 512
R L GDV I R+H +LE G IN+
Sbjct: 434 RPGLKNCGDVNCIGRIHTYLELIGAINF 461
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 67.0 bits (162), Expect = 1e-10
Identities = 59/167 (35%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 983 QQMHQQQQQPPPALPP--GSQ-PIPPT-----GAAGPPAVHGLAVAPASVVPAPAGSGAP 1034
Q+M +Q+ PPP P G+Q P PP G +GP L +AP P P G P
Sbjct: 305 QEMRRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPP--PTPRGP-PP 361
Query: 1035 PGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGP----HGPSPFPNQQTPPS 1090
PG GP A +GP P GA P PP PPP P +GP+P P PP+
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP---LPPA 418
Query: 1091 MMP--GAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP 1135
++P G PG G + Q I +Q N P A P+ PP
Sbjct: 419 LVPAGGLAPGGGRGALLDQ---IRQGIQLNKTPGA---PESSALQPP 459
Score = 51.6 bits (122), Expect = 4e-06
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 28/123 (22%)
Query: 1034 PPGSLGPSEQ-----IGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTP 1088
PP S G ++ +G +GP P G P P G PPPG GP P P T
Sbjct: 317 PPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATG 376
Query: 1089 PS-MMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTP 1147
S +P PG+G P P+P P P PP P++ + P
Sbjct: 377 RSGPLPPPPPGAGGP----------------------PMPPPPPPPPPPPSSGNGPAPPP 414
Query: 1148 VPP 1150
+PP
Sbjct: 415 LPP 417
Score = 37.0 bits (84), Expect = 0.11
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 1071 VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPG 1130
+PPP P PS NQ P ++ G G G P +A P+ P PG
Sbjct: 313 LPPPPP--PSRGGNQLPRPPIVGG---NKGRSGPLPPVPLGIAPPP----PTPRGPPPPG 363
Query: 1131 TPLPPDPTAPSPGTVTPVPPP 1151
PP P P+ G P+PPP
Sbjct: 364 RGGPPPPPPPATGRSGPLPPP 384
Score = 35.4 bits (80), Expect = 0.31
Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPA--PAGSGAPPGSLGP-SEQIGQAG 1048
PPP PP P PP+ GP AP + PA PAG AP G G +QI Q
Sbjct: 394 PPP--PPPPPP-PPSSGNGP--------APPPLPPALVPAGGLAPGGGRGALLDQIRQ-- 440
Query: 1049 STAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
G Q + GAP+ A+ P PP G
Sbjct: 441 ---GIQLNKTPGAPESSALQP--PPQSSEG 465
Score = 34.3 bits (77), Expect = 0.70
Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 1070 GVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDP 1129
G PP P G +P PP+ PG G P P G L P P
Sbjct: 340 GPLPPVPLGIAP-----PPPTPRGPPPPGRGGP---PPPPPPATGRSGPLPPPPPGAGGP 391
Query: 1130 GTPLPPDPTAPSPGTVT-PVPPP 1151
P PP P P P + P PPP
Sbjct: 392 PMPPPPPPPPPPPSSGNGPAPPP 414
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 67.0 bits (162), Expect = 1e-10
Identities = 57/168 (33%), Positives = 68/168 (40%), Gaps = 17/168 (10%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1044
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 631 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 687
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
S P Q P+ A P VPP P P PS P Q PP + A P P
Sbjct: 688 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL--AAPPLQVPPSP 741
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
A P +A +P L P +PP P A P + PPPQ
Sbjct: 742 PASPPMSPSATPPPRVPPL--LAAPPLQVPPSPPASLPMSPLAKPPPQ 787
Score = 59.3 bits (142), Expect = 2e-08
Identities = 54/169 (31%), Positives = 65/169 (38%), Gaps = 22/169 (13%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P+ P A LA P V P+P S PP S S
Sbjct: 705 QVPPS-PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPAS--PPMS----------PSA 751
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV-----PGSGHPGVA 1105
P + P A P VPP P P P P Q PP++ + P + PG A
Sbjct: 752 TPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQA 811
Query: 1106 AQSPAIVAAVQGNLLPSASPLPDPGTPL---PPDPTAPSPGTVTPVPPP 1151
SP+ + P P PL PP P A SP P PP
Sbjct: 812 PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA-SPTLQAPRRPP 859
Score = 57.0 bits (136), Expect = 1e-07
Identities = 52/176 (29%), Positives = 64/176 (36%), Gaps = 23/176 (13%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
+ PP P PP+ PP P+S+ P APP P Q G
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPE-----TPSSIATPPPQ--APPALASPPLQ-GLPSPP 610
Query: 1051 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV-------PGSGHPG 1103
P P AP A+PP PP P P TP P A+ P S P
Sbjct: 611 LSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 670
Query: 1104 VAAQSPAIVAAVQGNLLPSASP-------LPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
Q+P A + PSA+P L P +PP P A P + + PPPQ
Sbjct: 671 PPVQAPFSPPA-SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 725
Score = 53.5 bits (127), Expect = 1e-06
Identities = 56/167 (33%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P+ A PP V L AP VP +PP SL P + +
Sbjct: 736 QVPPS-PPASPPMSPS-ATPPPRVPPLLAAPPLQVPP-----SPPASL-PMSPLAKPPPQ 787
Query: 1051 AGPQQQQP--AGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPG--AVPGSGHPGVAA 1106
A P P P P A PG P P P TPP P A P P
Sbjct: 788 APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 847
Query: 1107 QSPAIVAAVQGNLLPSASPLPDPGTPL--PPDPTAPSPGTVTPVPPP 1151
SP + A P P P P T + P A +PG P PPP
Sbjct: 848 ASPTLQA-------PRRPPTPGPDTSVSGPRLTLALAPG---PPPPP 884
Score = 51.6 bits (122), Expect = 4e-06
Identities = 54/197 (27%), Positives = 67/197 (34%), Gaps = 38/197 (19%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
Q PP+ PP S P+ P P A LA P +P+P S PS + +
Sbjct: 767 QVPPS-PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Query: 1051 AGPQQQQPAGA-------PQPGAVP----PGVPP-PGP----HGP----SPFPNQQTPPS 1090
P Q P A P P A P P PP PGP GP + P PPS
Sbjct: 826 TPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS 885
Query: 1091 MMPGAVPG----SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGT-------------PL 1133
P + +GH A +P + A+ P P P
Sbjct: 886 RSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA 945
Query: 1134 PPDPTAPSPGTVTPVPP 1150
PP +PG P PP
Sbjct: 946 PPLAFRGAPGAPLPWPP 962
Score = 47.0 bits (110), Expect = 1e-04
Identities = 49/164 (29%), Positives = 60/164 (36%), Gaps = 21/164 (12%)
Query: 995 ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLGPSE-QIGQAGS 1049
+L S P + PP ++AP S+ PA PP SL P Q A
Sbjct: 494 SLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPL 553
Query: 1050 TAGPQQQQPAGAPQPGAVPPG-VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQS 1108
T + P AP P PP + P P PS TPP P A+ S
Sbjct: 554 TTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSI---ATPPPQAPPAL----------AS 600
Query: 1109 PAIVAAVQGNLLPSASPLPD--PGTPLPPDPTAPSPGTVTPVPP 1150
P + L P A+P P P LPP PSP P+ P
Sbjct: 601 PPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSP 644
Score = 44.7 bits (104), Expect = 5e-04
Identities = 44/168 (26%), Positives = 61/168 (36%), Gaps = 15/168 (8%)
Query: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVV-PAPAGSGA--PPGSLGPSEQIG 1045
Q+ +L + P+ +GP A G APA P P G A PP P +
Sbjct: 235 QRPASRSLSSSATPLSSPARSGPSA-RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKD-- 291
Query: 1046 QAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVA 1105
A GP P P P PP + +P P P + +P +A
Sbjct: 292 -AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLP------LA 344
Query: 1106 AQSPAIVAAVQGNLLPSASP--LPDPGTPLPPDPTAPSPGTVTPVPPP 1151
SP+ ++Q P A+P P PP PS T+ P+ P
Sbjct: 345 PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP 392
Score = 42.4 bits (98), Expect = 0.003
Identities = 41/165 (24%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1066
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1067 VPPGVPPPGP--------HGPS-------------PFPNQQTPPSMMPGAVPGSGHPGVA 1105
+P P GP P+ P N P PG G+ PG
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 1106 AQSPAIVAAVQGNLLPSASPLPDP---GTPLPPDPTAPSPGTVTP 1147
Q ++A + A+ P D + P+PGT +P
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSP 174
Score = 40.4 bits (93), Expect = 0.010
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 22/170 (12%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1050
+P P + P+P T PP L +AP P S PS Q +
Sbjct: 315 RPVPPPDNAATPLPATLPPSPPLATPLPLAP------------PSPSAPPSLQTLPSPPA 362
Query: 1051 AGPQQQQPAGAPQPGAVPPG---VPP-PGPHGPSPFPNQQTPPSMMP----GAVPGSGHP 1102
P Q P+ P PP +PP PH + P+ Q PPS + A G P
Sbjct: 363 TPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS-PSLQAPPSPLALSSLQATTSLGSP 421
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
+ A + + + SP TP P P +P ++ PP Q
Sbjct: 422 TLQATHSFLTMSPRQTQASLTSPSRPASTP-PDSPPLQAPLSLPASPPLQ 470
Score = 34.7 bits (78), Expect = 0.54
Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 38/167 (22%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAV--------APASVVPAPAGSGAPPGSLGPSEQIG 1045
P PP P P T +GP LA +P+S + P +G + E++
Sbjct: 855 PRRPP--TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 912
Query: 1046 ------QAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS 1099
+ G+ A P A P A G PP +P PP+ PG+ G
Sbjct: 913 GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 972
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP--DPTAPSPGT 1144
+ +G P+ TP P DP PSPGT
Sbjct: 973 ----------CTIYETEG---------PESATPAPGALDP-GPSPGT 999
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 65.9 bits (159), Expect = 2e-10
Identities = 76/367 (20%), Positives = 138/367 (37%), Gaps = 28/367 (7%)
Query: 786 GNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSD 845
G + + + Q ++++ ++P E++ KEK EA K++E+ E D E ++
Sbjct: 491 GKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKT 550
Query: 846 GDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAK 905
D + EKE + ++ S+G RK ++ R +++ A + A ++
Sbjct: 551 DDTSGEDNDEKEAVASKG---RKTANSQGRRKGRITR-----SMANEANSEEAITPQQSA 602
Query: 906 HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL------ETIMDREREALEYQRQQLL 959
LA++E + +ET K L R++ + +T+ + Y+++Q L
Sbjct: 603 ELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNL 662
Query: 960 AD-RQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLA 1018
+ Q ++ K R +++ ++ PP + V
Sbjct: 663 DEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAE 722
Query: 1019 VAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV-----PP 1073
AS P G + P ++ S S P + Q G PP PP
Sbjct: 723 ALHASGNEVPRGECSGPATVNNS---SDTESIPSPHTEAAKDTGQNGPKPPATLGADGPP 779
Query: 1074 PGPHGPS----PFPNQQTPPSMMPGA-VPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD 1128
PGP P P P + TP S GA P P +A P + + +A P+ +
Sbjct: 780 PGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEE 839
Query: 1129 PGTPLPP 1135
PP
Sbjct: 840 GEEQKPP 846
Score = 57.8 bits (138), Expect = 6e-08
Identities = 130/652 (19%), Positives = 218/652 (33%), Gaps = 92/652 (14%)
Query: 545 QPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPEL----------------QTSASQQ 588
Q P+ Q + D K K E ++ PE K +L + AS+
Sbjct: 509 QQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKG 568
Query: 589 MLNFPDKGKEK---PTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALE 645
+G+ K M N + T + + + + WTE+E + L
Sbjct: 569 RKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLL 628
Query: 646 MYKDDWNKVSEHVGSRTQDEC---ILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGN 702
+ +W+ ++ VGS+T +C ++ + D L+ + + ++
Sbjct: 629 EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPA 688
Query: 703 PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKAD- 761
AF V D + ++ EE + E + + E + A V +D
Sbjct: 689 AASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDT 748
Query: 762 ---PAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEP---REGGGAIEE 815
P+ E++ G +P + ++ P EP E GA
Sbjct: 749 ESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTP 808
Query: 816 EAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
+ AP K EKE E + P+ + E++K P EE+ + ++E
Sbjct: 809 PPAPPSPSAPPPVVPK-----EEKEEETAAAPPVEEGEEQKPP--AAEELAVDTGKAEEP 861
Query: 876 RKTKVERDIGEG---NLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEI 932
K++ + EG AA A A A+KA+ R + + +
Sbjct: 862 VKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATC 921
Query: 933 KLRHFEELETIMDREREALEYQRQQLLAD-----RQAFHMEQLKYAEMRARQQHFQQMHQ 987
+E E ++ L R LL A + L +++ R +
Sbjct: 922 SADEVDEAE---GGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVT 978
Query: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQA 1047
+ +PP ++P PP A PP + + P S P GS S P+
Sbjct: 979 KVHEPPREDAAPTKPAPP---APPPPQN---LQPESDAPQQPGSSPRGKSRSPA------ 1026
Query: 1048 GSTAGPQQQQPAGAPQPGAVP---PGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
A + ++P P A PG PP G PFP PP + A P + P
Sbjct: 1027 -PPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSG-LPFP---VPPREVIKASPHAPDPSA 1081
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLP------PDPTAPSPGTVTPVPP 1150
+ +P PG PLP P P P T++ PP
Sbjct: 1082 FSYAP-------------------PGHPLPLGLHDTARPVLPRPPTISNPPP 1114
Score = 31.6 bits (70), Expect = 4.5
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 305 PSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTK 364
PSP EA K + GP P T G +D+ P+ E T T
Sbjct: 752 PSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPA 811
Query: 365 KDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQ 406
S SAP + +E+E+E+ +E E E+
Sbjct: 812 PPSPSAP---PPVVPKEEKEEETAAAPPVEEGEEQKPPAAEE 850
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 65.9 bits (159), Expect = 2e-10
Identities = 90/368 (24%), Positives = 136/368 (36%), Gaps = 46/368 (12%)
Query: 820 KTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTK 879
K + P K+E ES S+ P+ P +E P EE E E + K +
Sbjct: 324 KDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLK-Q 382
Query: 880 VERDIGEGNLSTAAAAALAAAAVKAKHLAAVEE-RKIKSLVALLVETQMKKLEIKLRHFE 938
++ + KH + ++ + ++ Q ++++LRH+E
Sbjct: 383 LQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYE 442
Query: 939 ELETIMDREREALEYQRQQLLADRQAF---HMEQLKYAE---------MRARQQH----- 981
+ + E++R+ L + Q H +QL+ E M+A Q +
Sbjct: 443 MQQQQFQHLYQ--EWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKV 500
Query: 982 --FQQMHQQ----QQQPPPALPPGSQPIP-PTGAAG--PPAVHGLAVAPA--SVVPAPAG 1030
FQ M Q PPP +P P P PT PP++ + PA + VP P
Sbjct: 501 NSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPP-- 558
Query: 1031 SGAPPGSLGPS--EQIGQAG-----STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFP 1083
G PP + PS + G S+AGP P + PP +PPP +P P
Sbjct: 559 -GMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 1084 NQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT-APSP 1142
PP PG PGV P + A +P AS P P P P+P
Sbjct: 618 VMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAP---VPPASSSQSSQVPEKPRPALLPTP 674
Query: 1143 GTVTPVPP 1150
+ PP
Sbjct: 675 VSFGSAPP 682
Score = 47.4 bits (111), Expect = 8e-05
Identities = 63/217 (29%), Positives = 81/217 (37%), Gaps = 60/217 (27%)
Query: 977 ARQQHFQQMHQQQQQ---------PPPALPP--------GSQPIPPTGAAGPPA------ 1013
A+ Q QQMHQ+Q Q PPP PP G PP PP
Sbjct: 59 AQLQQLQQMHQKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQ 118
Query: 1014 ---------VHGLAVAPASVVP-----APAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPA 1059
+H P +VP P PPGS P Q S P Q P+
Sbjct: 119 KQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQ-----SYMPPPQPPPS 173
Query: 1060 GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNL 1119
P P + P +PP PSP Q+PPS A P + ++ S + ++ Q +
Sbjct: 174 YYP-PTSSQPYLPPA---QPSP---SQSPPSQSYLA-PTPSYSSSSSSSQSYLSHSQ-SY 224
Query: 1120 LPSASPLPDPGTP--------LPPDPTAPSPGTVTPV 1148
LPS+ P + PP P+AP PG T V
Sbjct: 225 LPSSQASPSRPSQGHSKSQLLAPPPPSAP-PGNKTTV 260
Score = 45.8 bits (107), Expect = 2e-04
Identities = 51/183 (27%), Positives = 66/183 (36%), Gaps = 25/183 (13%)
Query: 978 RQQHFQQMHQQQQQPPPAL-------PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAG 1030
+QQ+ QM Q+ PP L PP S P+PP G+ PP+ + P P
Sbjct: 120 QQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPP-GSYMPPSQSYMP------PPQPPP 172
Query: 1031 SGAPPGSLGPSEQIGQ-AGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1089
S PP S P Q + S + P Q A P + H S P+ Q P
Sbjct: 173 SYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASP 232
Query: 1090 SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLL-----PSASPLPDPGTPLPPDPTAPSPGT 1144
S P GH +P +A GN P S + T P P T
Sbjct: 233 SR-----PSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPST 287
Query: 1145 VTP 1147
+TP
Sbjct: 288 MTP 290
Score = 43.5 bits (101), Expect = 0.001
Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 28/173 (16%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
PPP +PP P A P A G + ++ AP+ SG Q+ Q
Sbjct: 15 PPPPVPP------PPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMH 68
Query: 1052 GPQQQ---QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV---- 1104
Q Q QP P P PP V P G +G Q PP M P P +
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDW----QPPPPPMPPPPGPALSYQKQQQYK 124
Query: 1105 ------AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1151
P + ++ P + P+P PG+ +PP + P P PPP
Sbjct: 125 HQMLHHQRDGPPGLVPMELESPPESPPVP-PGSYMPPSQSYMPP----PQPPP 172
Score = 39.7 bits (91), Expect = 0.017
Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 28/141 (19%)
Query: 1030 GSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP-GVPPPGPHGPSPFPNQQTP 1088
G PPGS P +G+ + PA + P PP +PPP P P P P P
Sbjct: 1504 GMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPP----P 1559
Query: 1089 PSMMP----------------GAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTP 1132
P + P G + G+ ++ + AA+ PSA LP P
Sbjct: 1560 PVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAI-----PSAPVLPPPPVH 1614
Query: 1133 LPPDPTAPSPGTVTPV--PPP 1151
P P P + P+ PPP
Sbjct: 1615 SSIPPPGPVPMGMPPMSKPPP 1635
Score = 38.9 bits (89), Expect = 0.028
Identities = 50/211 (23%), Positives = 72/211 (34%), Gaps = 50/211 (23%)
Query: 984 QMHQQQQQPPPAL-PPGSQ-----PIPPTGAAGPPAVHGLAVAPA--------------- 1022
Q + QPPP+ PP S P P+ + PP+ LA P+
Sbjct: 162 QSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHS 221
Query: 1023 --------------------SVVPAPAGSGAPPGSLGPSEQ--IGQAGSTAGPQQQQPAG 1060
S + AP APPG+ +Q + +QQQ A
Sbjct: 222 QSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAP 281
Query: 1061 APQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLL 1120
P P + P + QQ +PG G P VA +P V + +
Sbjct: 282 EPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKG---PVVAKDTPEPVK--EEVTV 336
Query: 1121 PSASPLPDPGTPLPPDPTAPSPGTVTPVPPP 1151
P+ S +P+ +P +P P P P P P
Sbjct: 337 PATSQVPE--SPSSEEPPLPPPNEEVPPPLP 365
Score = 36.2 bits (82), Expect = 0.18
Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 42/232 (18%)
Query: 931 EIKLRHFEELETIMDREREALEYQRQQLLADRQAFHM--EQLKYAEMRARQQHFQQMHQQ 988
EI L+ +EL+ + + ++E L+ + + A H+ ++ + +R +
Sbjct: 1454 EIILKAAQELKMLRE-QKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSY 1512
Query: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
+ PP PPGS P + PPA + P + P P PP L P + +
Sbjct: 1513 RPPPPMGKPPGSIVRP----SAPPARSSV---PVTRPPVPIPPPPPPPPLPPPPPVIKPQ 1565
Query: 1049 STAGPQQQ------------------------QPAGAPQPGAVPP-----GVPPPGPHGP 1079
++A Q++ + A P +PP +PPPGP P
Sbjct: 1566 TSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGP-VP 1624
Query: 1080 SPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGT 1131
P PP + G G + I + L P PLP+ T
Sbjct: 1625 MGMPPMSKPPPVQQTVDYGHGRDISTNKVEQIPYGERITLRP--DPLPERST 1674
Score = 32.7 bits (73), Expect = 2.0
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 29/84 (34%)
Query: 1069 PGV-PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLP 1127
PG+ PPPG + P P P PG++ P PA S+ P+
Sbjct: 1503 PGMYPPPGSYRPPP------PMGKPPGSIVRPSAP------PA----------RSSVPVT 1540
Query: 1128 DPGTPLPPDPTAPSPGTVTPVPPP 1151
P P+PP P P P+PPP
Sbjct: 1541 RPPVPIPPPPPPP------PLPPP 1558
Score = 32.3 bits (72), Expect = 2.7
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 1079 PSPF-PNQQTPP---SMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLP 1134
P PF P Q PP +M P +P S P V PA+ A V +P P T +P
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPV--MPPALPATVPPPGMPPPVMPPSLPTSVP 574
Query: 1135 PDPTAPSPGTVTP---VPPP 1151
P PS + P +PPP
Sbjct: 575 PPGMPPSLSSAGPPPVLPPP 594
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 855
Score = 65.1 bits (157), Expect = 4e-10
Identities = 59/168 (35%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1044
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 406 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 462
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
S P Q P+ A P VPP P P PS P Q PP P A P
Sbjct: 463 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQLAKP 515
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
Q+P +A LPS P PG P P+A P + PPPQ
Sbjct: 516 PPQAPPALATPPLQALPS-PPASFPG-QAPFSPSASLPMSPLATPPPQ 561
Score = 55.5 bits (132), Expect = 3e-07
Identities = 57/188 (30%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 989 QQQPPPALP--PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG----SLG-PS 1041
Q Q PP LP P S + A P AP S+ P+ PP SLG P+
Sbjct: 314 QSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 373
Query: 1042 EQIGQA---GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAV-- 1096
Q + P P AP A+PP PP P P TP P A+
Sbjct: 374 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 1097 -----PGSGHPGVAAQSPAIVAAVQGNLLPSASP-------LPDPGTPLPPDPTAPSPGT 1144
P S P Q+P A + PSA+P L P +PP P A P +
Sbjct: 434 HLLQAPFSPPPSPPVQAPFSPPA-SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMS 492
Query: 1145 VTPVPPPQ 1152
+ PPPQ
Sbjct: 493 PSATPPPQ 500
Score = 51.6 bits (122), Expect = 4e-06
Identities = 53/179 (29%), Positives = 65/179 (36%), Gaps = 37/179 (20%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSG-----------APPGSLGPSE 1042
P PP S P+ P+ A LA P V P+P S APP P
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
Q+ + P Q PA A P P P P G +PF + P M P A P
Sbjct: 511 QLAKP-----PPQAPPALATPPLQALPSPPASFP-GQAPFSPSASLP-MSPLATP----- 558
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGT----------VTPVPPP 1151
Q+P ++AA + P SP P P P P P T + P PPP
Sbjct: 559 --PPQAPPVLAAPLLQVPP--SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 613
Score = 48.5 bits (114), Expect = 4e-05
Identities = 61/221 (27%), Positives = 74/221 (33%), Gaps = 60/221 (27%)
Query: 988 QQQQPPPALPPG-------SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +PPP PP + P PP G A P S + P APP P
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ-APPVLAAP 569
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPG------------AVPPGVPPPGPHGPSP------F 1082
Q+ + A P Q P P PG A+ PG PPP PS
Sbjct: 570 LLQVPPS-PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 628
Query: 1083 PNQQTPPSMMPGAVPG--SGHPGVAAQSP---AIVAAVQGNLLPSASPLPD------PGT 1131
+ + P + G SG G AA SP A +AA S P P PG
Sbjct: 629 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW-SRGPAPPLAFRGAPGA 687
Query: 1132 PLP---------------------PDPTAPSPGTVTPVPPP 1151
PLP P+ P+PG + P P P
Sbjct: 688 PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 728
Score = 47.8 bits (112), Expect = 6e-05
Identities = 56/199 (28%), Positives = 67/199 (33%), Gaps = 42/199 (21%)
Query: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
Q PP A PP PP A PPA LA P +P+P S PS + +
Sbjct: 500 QAPPPLAAPPLQLAKPPPQA--PPA---LATPPLQALPSPPASFPGQAPFSPSASLPMSP 554
Query: 1049 STAGPQQQQPAGA-------PQPGAVP----PGVPP-PGP----HGP----SPFPNQQTP 1088
P Q P A P P A P P PP PGP GP + P P
Sbjct: 555 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP 614
Query: 1089 PSMMPGAVPG----SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGT------------- 1131
PS P + +GH A +P + A+ P P
Sbjct: 615 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 674
Query: 1132 PLPPDPTAPSPGTVTPVPP 1150
P PP +PG P PP
Sbjct: 675 PAPPLAFRGAPGAPLPWPP 693
Score = 43.1 bits (100), Expect = 0.002
Identities = 49/163 (30%), Positives = 61/163 (37%), Gaps = 23/163 (14%)
Query: 1005 PTGAAGP--PAVHGL-AVAPASVVPAPAGSGAPPGSLGP--SEQIGQAGSTAGPQQQQPA 1059
P A P P GL A+ P V P P AP +LGP S + +A Q Q P
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTP-PRKDAAP--ALGPLSSSPLATPSPSAALQSQAPP 319
Query: 1060 GAPQPG---------AVPPGVPPPGPHGPSPFPNQQTPPSMMPG-AVPGSGHPGVAAQSP 1109
P A P + PP P P +PP+ P A G P + A
Sbjct: 320 TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Query: 1110 AIVAAVQGNLLPSASPLPD--PGTPLPPDPTAPSPGTVTPVPP 1150
+ + L P A+P P P LPP PSP P+ P
Sbjct: 380 FLPSP---PLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP 419
Score = 42.4 bits (98), Expect = 0.003
Identities = 41/165 (24%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1066
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1067 VPPGVPPPGP--------HGPS-------------PFPNQQTPPSMMPGAVPGSGHPGVA 1105
+P P GP P+ P N P PG G+ PG
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 1106 AQSPAIVAAVQGNLLPSASPLPDP---GTPLPPDPTAPSPGTVTP 1147
Q ++A + A+ P D + P+PGT +P
Sbjct: 130 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSP 174
Score = 34.7 bits (78), Expect = 0.54
Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 38/167 (22%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAV--------APASVVPAPAGSGAPPGSLGPSEQIG 1045
P PP P P T +GP LA +P+S + P +G + E++
Sbjct: 586 PRRPP--TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 643
Query: 1046 ------QAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS 1099
+ G+ A P A P A G PP +P PP+ PG+ G
Sbjct: 644 GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 703
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP--DPTAPSPGT 1144
+ +G P+ TP P DP PSPGT
Sbjct: 704 ----------CTIYETEG---------PESATPAPGALDP-GPSPGT 730
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 65.1 bits (157), Expect = 4e-10
Identities = 59/168 (35%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 991 QPPPALPPGSQPIPPTGAAGPPAVHGLAV----APASVVPAPAGSG--APPGSLGPSEQI 1044
Q PP+ PP S P+ P P A + LAV AP S P+P +PP S S
Sbjct: 367 QAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-- 423
Query: 1045 GQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGV 1104
S P Q P+ A P VPP P P PS P Q PP P A P
Sbjct: 424 ----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQLAKP 476
Query: 1105 AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ 1152
Q+P +A LPS P PG P P+A P + PPPQ
Sbjct: 477 PPQAPPALATPPLQALPS-PPASFPG-QAPFSPSASLPMSPLATPPPQ 522
Score = 55.8 bits (133), Expect = 2e-07
Identities = 55/197 (27%), Positives = 70/197 (35%), Gaps = 36/197 (18%)
Query: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGA-----PPGSLGPSE 1042
Q +PP PP P A GP + LA S P+P+ + P + PS+
Sbjct: 269 QALRPPQVTPPRKDAAP---ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Query: 1043 QIGQAGSTA-------------GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1089
GS P P AP A+PP PP P P TP
Sbjct: 326 ATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS 385
Query: 1090 SMMPGAV-------PGSGHPGVAAQSPAIVAAVQGNLLPSASP-------LPDPGTPLPP 1135
P A+ P S P Q+P A + PSA+P L P +PP
Sbjct: 386 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA-SPPVSPSATPPSQAPPSLAAPPLQVPP 444
Query: 1136 DPTAPSPGTVTPVPPPQ 1152
P A P + + PPPQ
Sbjct: 445 SPPASPPMSPSATPPPQ 461
Score = 51.6 bits (122), Expect = 4e-06
Identities = 53/179 (29%), Positives = 65/179 (36%), Gaps = 37/179 (20%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSG-----------APPGSLGPSE 1042
P PP S P+ P+ A LA P V P+P S APP P
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Query: 1043 QIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
Q+ + P Q PA A P P P P G +PF + P M P A P
Sbjct: 472 QLAKP-----PPQAPPALATPPLQALPSPPASFP-GQAPFSPSASLP-MSPLATP----- 519
Query: 1103 GVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGT----------VTPVPPP 1151
Q+P ++AA + P SP P P P P P T + P PPP
Sbjct: 520 --PPQAPPVLAAPLLQVPP--SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Score = 48.5 bits (114), Expect = 4e-05
Identities = 61/221 (27%), Positives = 73/221 (33%), Gaps = 60/221 (27%)
Query: 988 QQQQPPPALPPG-------SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
Q +PPP PP + P PP G A P S + P APP P
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ-APPVLAAP 530
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPG------------AVPPGVPPPGPHGPS------PF 1082
Q+ A P Q P P PG A+ PG PPP PS
Sbjct: 531 LLQV-PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 589
Query: 1083 PNQQTPPSMMPGAVPG--SGHPGVAAQSP---AIVAAVQGNLLPSASPLPD------PGT 1131
+ + P + G SG G AA SP A +AA S P P PG
Sbjct: 590 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW-SRGPAPPLAFRGAPGA 648
Query: 1132 PLP---------------------PDPTAPSPGTVTPVPPP 1151
PLP P+ P+PG + P P P
Sbjct: 649 PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 689
Score = 47.8 bits (112), Expect = 6e-05
Identities = 56/199 (28%), Positives = 67/199 (33%), Gaps = 42/199 (21%)
Query: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
Q PP A PP PP A PPA LA P +P+P S PS + +
Sbjct: 461 QAPPPLAAPPLQLAKPPPQA--PPA---LATPPLQALPSPPASFPGQAPFSPSASLPMSP 515
Query: 1049 STAGPQQQQPAGA-------PQPGAVP----PGVPP-PGP----HGP----SPFPNQQTP 1088
P Q P A P P A P P PP PGP GP + P P
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP 575
Query: 1089 PSMMPGAVPG----SGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGT------------- 1131
PS P + +GH A +P + A+ P P
Sbjct: 576 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 635
Query: 1132 PLPPDPTAPSPGTVTPVPP 1150
P PP +PG P PP
Sbjct: 636 PAPPLAFRGAPGAPLPWPP 654
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/156 (26%), Positives = 56/156 (35%), Gaps = 17/156 (10%)
Query: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS--EQIGQAGSTAGPQQQQPAGAPQPGA 1066
AG A A AP + P P GS PP + P+ +G AG+ + AG
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 1067 VPPGVPPPGPHGPS------------PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAA 1114
+P P GP S P N P PG G+ PG Q ++A
Sbjct: 70 IPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISA 129
Query: 1115 VQGNLLPSASPLPDP---GTPLPPDPTAPSPGTVTP 1147
+ A+ P D + P+PGT +P
Sbjct: 130 EETVARGKATEAPKRSALSAGARRDTSGPTPGTPSP 165
Score = 43.5 bits (101), Expect = 0.001
Identities = 47/165 (28%), Positives = 62/165 (37%), Gaps = 32/165 (19%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA 1051
P PA P ++P PPT GP A ++ P+PA P +A
Sbjct: 181 PRPA--PSARPRPPT--EGPRKSVSSASEHSTTEPSPAARRRP---------------SA 221
Query: 1052 GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP-GVAAQSPA 1110
G Q+PA + P + P GPS + P A P P G+ A P
Sbjct: 222 GGGLQRPASRSLSSSATP-LSSPARSGPSARGTPRAP------AHPSQPKPKGLQALRPP 274
Query: 1111 IVAAVQGNLLP-----SASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
V + + P S+SPL P PP P+AP P PP
Sbjct: 275 QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPP 319
Score = 34.7 bits (78), Expect = 0.54
Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 38/167 (22%)
Query: 994 PALPPGSQPIPPTGAAGPPAVHGLAV--------APASVVPAPAGSGAPPGSLGPSEQIG 1045
P PP P P T +GP LA +P+S + P +G + E++
Sbjct: 547 PRRPP--TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 604
Query: 1046 ------QAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS 1099
+ G+ A P A P A G PP +P PP+ PG+ G
Sbjct: 605 GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 664
Query: 1100 GHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPP--DPTAPSPGT 1144
+ +G P+ TP P DP PSPGT
Sbjct: 665 ----------CTIYETEG---------PESATPAPGALDP-GPSPGT 691
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 65.1 bits (157), Expect = 4e-10
Identities = 59/197 (29%), Positives = 74/197 (37%), Gaps = 38/197 (19%)
Query: 979 QQHFQQMHQQQQQ-----PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGA 1033
Q Q +H Q Q PPP LPP +PP PP S+ P PA A
Sbjct: 1261 QSKLQALHAQYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQ-----LGSIPPPPA--SA 1313
Query: 1034 PPGSLGPSEQIGQAGSTAGPQQQ---QPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS 1090
PP +GP G GPQ +P AP+ GA G P PHG P P S
Sbjct: 1314 PP--VGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGA--GGHPQFAPHGRHPL---HQPTS 1366
Query: 1091 MMPGAVPGSGHPGVAAQSPA-IVAAVQGNLLPSASPLPDPG---------------TPLP 1134
+P P HP Q P + + ++P+A PG +PL
Sbjct: 1367 PLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLS 1426
Query: 1135 PDPTAPSPGTVTPVPPP 1151
P P + P+PPP
Sbjct: 1427 PHSPIPPHPSYPPLPPP 1443
Score = 45.1 bits (105), Expect = 4e-04
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 981 HFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGP 1040
H + Q P P P Q PP GP H + ++PA AG+ PGS P
Sbjct: 1356 HGRHPLHQPTSPLPLYSPAPQH-PPAHKQGPK--HFIFSHHPQMMPA-AGAAGGPGSRPP 1411
Query: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVP----PGVPPPGPHGPSPFPNQQTPPSMMPGAV 1096
GS + P Q +P P P +PPP PH P + PP+ G +
Sbjct: 1412 G------GSYSHPHHPQSPLSPHSPIPPHPSYPPLPPPSPHTP----HSPLPPTSPHGPL 1461
Query: 1097 PGSGHPGVA 1105
SG PG A
Sbjct: 1462 HASGPPGTA 1470
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 65.1 bits (157), Expect = 4e-10
Identities = 91/379 (24%), Positives = 135/379 (35%), Gaps = 49/379 (12%)
Query: 795 QATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEK 854
+ DEK GG EE + K + + G EG + + +G +PE+
Sbjct: 25 EVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQ 84
Query: 855 EKE------PKEGQEE--VLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 906
++E P++ QEE +L+ E E +T VE TA K +
Sbjct: 85 QQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGP--QPPERKRRR 142
Query: 907 LAAVEERKIKSLVALLVETQ------MKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
A + +++ L E+Q ++L +L E+ + + R A + Q++L
Sbjct: 143 RTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLM 202
Query: 961 DRQAFHMEQLKYAEMRARQQHFQQ--------MHQQQQQP-PPALPPGSQPIPPTGAAGP 1011
R + +M ++ +H Q P PP LP P P P
Sbjct: 203 LRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMP 262
Query: 1012 PAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV 1071
P + P + P P GS P GP P P AP P P
Sbjct: 263 PRPPIAPMPP--MAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
Query: 1072 PPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGT 1131
PPGP P + PP VP P +A P P +PLP PG
Sbjct: 321 VPPGP------PMARVPPGPPMARVPPG--PPMAPLPPG----------PPMAPLP-PGP 361
Query: 1132 PLPPDPTAPSPGTVTPVPP 1150
P+ P P P + P+PP
Sbjct: 362 PMAPLPPGP---PMAPLPP 377
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 65.1 bits (157), Expect = 4e-10
Identities = 60/180 (33%), Positives = 70/180 (38%), Gaps = 46/180 (25%)
Query: 998 PGSQPIPPTGAAGPP-AVHGLAVAPASV-VPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQ 1055
P S +PPT +GPP A L+ P + VPAPA APP +LGP A P
Sbjct: 314 PQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPA---APPSALGPK---------ASPAP 361
Query: 1056 QQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPG------------ 1103
+G P P A V PP P GPS Q PPS+ P G G G
Sbjct: 362 SHNSGTPAPYA--QAVAPPAPSGPS--TTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAG 417
Query: 1104 --------------VAAQSPAIVA--AVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTP 1147
V A SPA VA + GN S + P G PP T+ P P
Sbjct: 418 GGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAP 477
Score = 51.2 bits (121), Expect = 6e-06
Identities = 50/191 (26%), Positives = 70/191 (36%), Gaps = 45/191 (23%)
Query: 992 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPA-------------SVVPAPAGSGAPPGSL 1038
PP AL P + P P + G PA + AVAP SV P+ G G G
Sbjct: 349 PPSALGPKASPAPSHNS-GTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGG 407
Query: 1039 GPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGV----------------PPPGPHGPSPF 1082
S AG AG Q + + P V PP GPH P P
Sbjct: 408 SSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPS 467
Query: 1083 PNQQ---TPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTA 1139
+++ P+ G PGSG+ + P+++ + P+ P +P P A
Sbjct: 468 TSKEPSAAAPTGAGGVAPGSGN---NSGGPSLLVPL---------PVNPPSSPTPSFSDA 515
Query: 1140 PSPGTVTPVPP 1150
+ G + PP
Sbjct: 516 KAAGALLNGPP 526
Score = 42.7 bits (99), Expect = 0.002
Identities = 58/220 (26%), Positives = 78/220 (35%), Gaps = 40/220 (18%)
Query: 938 EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALP 997
+++E +D ++ + + L D + Q A H + Q P
Sbjct: 205 DDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTST 264
Query: 998 PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQ 1057
S PIPP+ PA+ + G SE + Q+ + G +
Sbjct: 265 TSSSPIPPS--------------PANCTTENSEDDKKRGRSTDSE-VSQSPAKNGSKPVH 309
Query: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQG 1117
PQ P VPP P GP P + S PG +G P AA A
Sbjct: 310 SNQHPQS----PAVPPTYPSGPPPAASAL---STTPG---NNGVPAPAAPPSA------- 352
Query: 1118 NLLPSASPLP--DPGTPLP----PDPTAPS-PGTVTPVPP 1150
L P ASP P + GTP P P APS P T P PP
Sbjct: 353 -LGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPP 391
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 64.3 bits (155), Expect = 6e-10
Identities = 57/169 (33%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP----GSLG--PSEQIGQ 1046
PP G+ P+PPTG +G P V + A VP SGAPP G G P G
Sbjct: 586 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 645
Query: 1047 AGSTAGPQQQQPAGAPQP---GAVPPGVPPPGPHGPSPFPNQQTPPSMMPGA--VPGSGH 1101
+G+ P P P + P VPP G GP P PP+ GA VP +G
Sbjct: 646 SGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPP-----VPPTGDSGAPPVPPTGD 700
Query: 1102 PGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
G +P + P P D G P P PT S PVPP
Sbjct: 701 SG----APPVTPTGDSETAP-VPPTGDSGAP-PVPPTGDS--EAAPVPP 741
Score = 62.0 bits (149), Expect = 3e-09
Identities = 54/160 (33%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
PP + P+PPTG +G P V + A VP SGAPP + P+ G +G+
Sbjct: 575 PPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP--VPPT---GDSGAPPV 629
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGA--VPGSGHPGVAAQSPA 1110
P P P G PP P G S P PP+ GA VP +G G P
Sbjct: 630 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAP--PVPPTGDSGAPPVPPTGDAG-----PP 682
Query: 1111 IVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPP 1150
V + P P D G P P PT S PVPP
Sbjct: 683 PVPPTGDSGAPPVPPTGDSGAP-PVTPTGDS--ETAPVPP 719
Score = 50.1 bits (118), Expect = 1e-05
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 993 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAG 1052
PP G+ P+PPTG AGPP V + A VP SGAPP + G
Sbjct: 663 PPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPP------------VTPTG 710
Query: 1053 PQQQQPAGAPQPGAVPPGVPPPGPHGPSPF-PNQQTPPSMMPGAV 1096
+ P PP VPP G +P P + + MP +
Sbjct: 711 DSETAPVPPTGDSGAPP-VPPTGDSEAAPVPPTDDSKEAQMPAVI 754
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 64.3 bits (155), Expect = 6e-10
Identities = 67/250 (26%), Positives = 97/250 (38%), Gaps = 25/250 (10%)
Query: 923 VETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHF 982
V Q ++L+ + + + L + + ++ ++ Q+QQL Q QL+ + + +QQ
Sbjct: 203 VVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL----QRIAQLQLQQQQQQQQQQQQ 258
Query: 983 QQMHQQQQQPPPALPPGSQPIPPTGAAGPPAV----HGLAVAPASVVPAPAGSGAPPGSL 1038
QQ Q QPP PP QP PP A P + H P P + P L
Sbjct: 259 QQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQL 318
Query: 1039 GPSEQ----IGQAGSTAGPQ-QQQP----AGAPQPGAVPPGVPPPGPHGPSPFPNQQTPP 1089
P Q + QA + G QP AP PP V P + Q
Sbjct: 319 PPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP-VQPQVQQQQTAVQTAQAAQ 377
Query: 1090 SMMPGA-VPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT------APSP 1142
+ PG V S P +++ SP ++ P P P PG P + APSP
Sbjct: 378 MVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSP 437
Query: 1143 GTVTPVPPPQ 1152
+ P P PQ
Sbjct: 438 SSFLPSPSPQ 447
Score = 56.2 bits (134), Expect = 2e-07
Identities = 78/290 (26%), Positives = 111/290 (38%), Gaps = 47/290 (16%)
Query: 900 AAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLL 959
+A++ + A V++++ L + Q ++ IKL H + + I ++++ + QL
Sbjct: 194 SAMQQQFQAVVQQQQ-----QLQQQQQQQQHLIKLHH-QNQQQIQQQQQQLQRIAQLQLQ 247
Query: 960 ADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPP--ALPPGSQPI-------PPTGAAG 1010
+Q +Q + + Q QQ QQ QPPP ALP Q + PP
Sbjct: 248 QQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQ 307
Query: 1011 PPAVHGL------------AVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQP 1058
PP V+ A +P PP + + Q PQ QQ
Sbjct: 308 PPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQ-PPVQPQVQQQ 366
Query: 1059 AGAPQPG----AVPPGVPP-----PGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSP 1109
A Q V PGV P PSP QTP SM P P S PG + P
Sbjct: 367 QTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQP-SPQPGQPSSQP 425
Query: 1110 -----AIVAAVQGNLLPSASPLPDPG---TPLPPDPTAPSPGTV-TPVPP 1150
+ A + LPS SP P P + + PSPG + TPV P
Sbjct: 426 NSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNP 475
Score = 35.8 bits (81), Expect = 0.24
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 924 ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQ 983
+TQ++ ++ L+ ++ + +++ AL+ Q+QQ +Q A+ A QQ FQ
Sbjct: 150 QTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQ--------QQQQQFQAQQSAMQQQFQ 201
Query: 984 QMHQQQQQ 991
+ QQQQQ
Sbjct: 202 AVVQQQQQ 209
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,370,647
Number of Sequences: 37866
Number of extensions: 3644058
Number of successful extensions: 66353
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 2551
Number of HSP's that attempted gapping in prelim test: 22069
Number of HSP's gapped (non-prelim): 23216
length of query: 1152
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1039
effective length of database: 13,968,660
effective search space: 14513437740
effective search space used: 14513437740
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.