Guide to the Human Genome
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Name: C10orf67 Sequence: fasta or formatted (185aa) NCBI GI: 194353968
Description:

hypothetical protein LOC256815

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         12           1
 C cysteine            1.6          3           2
 D aspartate           5.4         10           2
 E glutamate           6.5         12           2
 F phenylalanine       5.4         10           2
 G glycine             3.2          6           1
 H histidine           2.7          5           1
 I isoleucine          5.4         10           1
 K lysine              8.1         15           1
 L leucine            10.8         20           2
 M methionine          4.9          9           2
 N asparagine          1.6          3           1
 P proline             1.6          3           2
 Q glutamine           6.5         12           2
 R arginine            8.6         16           2
 S serine              9.2         17           3
 T threonine           4.9          9           1
 V valine              4.3          8           1
 W tryptophan          1.1          2           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC256815 
TRIP11                0.024   thyroid hormone receptor interactor 11 
CCAR1                 0.021   cell-cycle and apoptosis regulatory protein 1 
CCDC41                0.018   NY-REN-58 antigen 
CCDC41                0.018   NY-REN-58 antigen 
C15orf42              0.015   leucine-rich repeat kinase 1 
TXLNA                 0.015   taxilin 
TBC1D4                0.015   TBC1 domain family, member 4 
FKBP15                0.015   FK506 binding protein 15, 133kDa 
SEMA4G                0.015   semaphorin 4G 
TSC2                  0.012   tuberous sclerosis 2 isoform 4 
TSC2                  0.012   tuberous sclerosis 2 isoform 1 
TSC2                  0.012   tuberous sclerosis 2 isoform 5 
ACTR5                 0.012   ARP5 actin-related protein 5 homolog 
C6orf204              0.012   chromosome 6 open reading frame 204 isoform a [Homo...
CCDC150               0.012   coiled-coil domain containing 150 
EVI5L                 0.009   ecotropic viral integration site 5-like isoform 2 [H...
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
NAP5                  0.009   Nck-associated protein 5 isoform 2 
NAP5                  0.009   Nck-associated protein 5 isoform 1 
C22orf42              0.009   chromosome 22 open reading frame 42 
ANKRD11               0.009   ankyrin repeat domain 11 
TTC25                 0.009   tetratricopeptide repeat domain 25 
C1orf9                0.009   chromosome 1 open reading frame 9 protein isoform 2...
C1orf9                0.009   chromosome 1 open reading frame 9 protein isoform 1 [...
PCNT                  0.009   pericentrin 
BBS9                  0.009   parathyroid hormone-responsive B1 isoform 4 
BBS9                  0.009   parathyroid hormone-responsive B1 isoform 3 
BBS9                  0.009   parathyroid hormone-responsive B1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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