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Search of human proteins with 194306564
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194306564 hypothetical protein LOC81926 isoform 2 [Homo
sapiens]
(310 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens] 640 0.0
gi|239741293 PREDICTED: hypothetical protein XP_002342156 [Homo ... 623 e-179
gi|194306562 hypothetical protein LOC81926 isoform 1 [Homo sapiens] 616 e-177
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens] 614 e-176
gi|169215908 PREDICTED: family with sequence similarity 108, mem... 564 e-161
gi|169215726 PREDICTED: family with sequence similarity 108, mem... 564 e-161
gi|239746656 PREDICTED: hypothetical protein LOC729495 [Homo sap... 564 e-161
gi|151301175 hypothetical protein LOC58489 [Homo sapiens] 503 e-143
gi|71051602 family with sequence similarity 108, member B1 isofo... 482 e-136
gi|71051600 family with sequence similarity 108, member B1 isofo... 482 e-136
gi|49355781 abhydrolase domain containing 13 [Homo sapiens] 79 7e-15
gi|32528310 abhydrolase domain containing 12B isoform c [Homo sa... 69 4e-12
gi|32451492 abhydrolase domain containing 12B isoform b [Homo sa... 69 4e-12
gi|109689718 abhydrolase domain containing 12 isoform a [Homo sa... 63 4e-10
gi|24308097 abhydrolase domain containing 12 isoform b [Homo sap... 63 4e-10
gi|15100151 HLA-B associated transcript 5 [Homo sapiens] 45 6e-05
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 34 0.19
gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens] 33 0.25
gi|28629871 hypothetical protein LOC140701 [Homo sapiens] 33 0.42
gi|11386199 poliovirus receptor-related 3 [Homo sapiens] 32 0.72
gi|86792774 dipeptidyl-peptidase 6 isoform 1 [Homo sapiens] 32 0.94
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 32 0.94
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 32 0.94
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 32 0.94
gi|91208420 bassoon protein [Homo sapiens] 31 1.6
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 30 2.1
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 30 2.7
gi|8922157 proline rich 13 isoform 1 [Homo sapiens] 30 2.7
gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens] 30 3.6
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 30 3.6
>gi|194306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens]
Length = 310
Score = 640 bits (1650), Expect = 0.0
Identities = 310/310 (100%), Positives = 310/310 (100%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS
Sbjct: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN
Sbjct: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
Query: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS
Sbjct: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
Query: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV
Sbjct: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
Query: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF
Sbjct: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
Query: 301 ISQELPSQRA 310
ISQELPSQRA
Sbjct: 301 ISQELPSQRA 310
>gi|239741293 PREDICTED: hypothetical protein XP_002342156 [Homo
sapiens]
Length = 383
Score = 623 bits (1606), Expect = e-179
Identities = 303/310 (97%), Positives = 305/310 (98%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPE GPGGAGAAPLGTLRASS
Sbjct: 74 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPELGPGGAGAAPLGTLRASS 133
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN
Sbjct: 134 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 193
Query: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
AVDLGQMSSFYIGLGSRLHCNIF+YD SGYGASSGRPSERNLYADIDA WQALRTRYGIS
Sbjct: 194 AVDLGQMSSFYIGLGSRLHCNIFTYDSSGYGASSGRPSERNLYADIDATWQALRTRYGIS 253
Query: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
PDSIILYGQSIGTVPT+DLASRYECAAVVLHSPLTSGMRVAF DTKKTYCFDAFPNIEKV
Sbjct: 254 PDSIILYGQSIGTVPTMDLASRYECAAVVLHSPLTSGMRVAFRDTKKTYCFDAFPNIEKV 313
Query: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
SKITSPVLIIHG EDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF
Sbjct: 314 SKITSPVLIIHGREDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 373
Query: 301 ISQELPSQRA 310
ISQELPSQRA
Sbjct: 374 ISQELPSQRA 383
>gi|194306562 hypothetical protein LOC81926 isoform 1 [Homo sapiens]
Length = 361
Score = 616 bits (1588), Expect = e-177
Identities = 310/361 (85%), Positives = 310/361 (85%), Gaps = 51/361 (14%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS
Sbjct: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGAR--------- 111
GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGAR
Sbjct: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARQGHQAQGGH 120
Query: 112 ------------------------------------------YTVLFSHGNAVDLGQMSS 129
YTVLFSHGNAVDLGQMSS
Sbjct: 121 PQLAWVGRLGDSNNPAPGGCLLGKSWGTGAALACGYIHLLARYTVLFSHGNAVDLGQMSS 180
Query: 130 FYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQ 189
FYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQ
Sbjct: 181 FYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQ 240
Query: 190 SIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLI 249
SIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLI
Sbjct: 241 SIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLI 300
Query: 250 IHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQR 309
IHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQR
Sbjct: 301 IHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQR 360
Query: 310 A 310
A
Sbjct: 361 A 361
>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
Length = 451
Score = 614 bits (1584), Expect = e-176
Identities = 299/307 (97%), Positives = 300/307 (97%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLV EPEPGPGGAGAAPLGTLRASS
Sbjct: 74 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVTEPEPGPGGAGAAPLGTLRASS 133
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSAR NRVSCMYVRCV GARYTVLFSH N
Sbjct: 134 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARRNRVSCMYVRCVTGARYTVLFSHSN 193
Query: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS
Sbjct: 194 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 253
Query: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV
Sbjct: 254 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 313
Query: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEG HNDIELYSQYLE LRRF
Sbjct: 314 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGTRHNDIELYSQYLEGLRRF 373
Query: 301 ISQELPS 307
ISQELP+
Sbjct: 374 ISQELPA 380
>gi|169215908 PREDICTED: family with sequence similarity 108, member
A5 [Homo sapiens]
Length = 403
Score = 564 bits (1454), Expect = e-161
Identities = 287/315 (91%), Positives = 289/315 (91%), Gaps = 12/315 (3%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGA-----APLGT 55
MNGLSLSELCCLFC PPCPGRIAAKLAFLPPEATYSLV PEPGPGGAGA PLG
Sbjct: 96 MNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATYSLV--PEPGPGGAGAWWGRGRPLGD 153
Query: 56 LRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVL 115
+G GRWKLHLTE ADFQYSQRELDTIEVFPTKSA GNRVSCMYVRCVPGARYTV
Sbjct: 154 ---PAGLLGRWKLHLTELADFQYSQRELDTIEVFPTKSAHGNRVSCMYVRCVPGARYTVF 210
Query: 116 FSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRT 175
FSHGNAVDLGQMSSFY GL SRLHCNI YDYSGYGAS+GRPSE NLYADIDAAWQALRT
Sbjct: 211 FSHGNAVDLGQMSSFYTGLNSRLHCNII-YDYSGYGASAGRPSEWNLYADIDAAWQALRT 269
Query: 176 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFP 235
RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT KTYCFDAFP
Sbjct: 270 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT-KTYCFDAFP 328
Query: 236 NIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 295
NIEKVSKITSPVLIIHG EDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE
Sbjct: 329 NIEKVSKITSPVLIIHGMEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 388
Query: 296 RLRRFISQELPSQRA 310
RLRRFISQELPSQRA
Sbjct: 389 RLRRFISQELPSQRA 403
>gi|169215726 PREDICTED: family with sequence similarity 108, member
A5 [Homo sapiens]
Length = 403
Score = 564 bits (1454), Expect = e-161
Identities = 287/315 (91%), Positives = 289/315 (91%), Gaps = 12/315 (3%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGA-----APLGT 55
MNGLSLSELCCLFC PPCPGRIAAKLAFLPPEATYSLV PEPGPGGAGA PLG
Sbjct: 96 MNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATYSLV--PEPGPGGAGAWWGRGRPLGD 153
Query: 56 LRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVL 115
+G GRWKLHLTE ADFQYSQRELDTIEVFPTKSA GNRVSCMYVRCVPGARYTV
Sbjct: 154 ---PAGLLGRWKLHLTELADFQYSQRELDTIEVFPTKSAHGNRVSCMYVRCVPGARYTVF 210
Query: 116 FSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRT 175
FSHGNAVDLGQMSSFY GL SRLHCNI YDYSGYGAS+GRPSE NLYADIDAAWQALRT
Sbjct: 211 FSHGNAVDLGQMSSFYTGLNSRLHCNII-YDYSGYGASAGRPSEWNLYADIDAAWQALRT 269
Query: 176 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFP 235
RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT KTYCFDAFP
Sbjct: 270 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT-KTYCFDAFP 328
Query: 236 NIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 295
NIEKVSKITSPVLIIHG EDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE
Sbjct: 329 NIEKVSKITSPVLIIHGMEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 388
Query: 296 RLRRFISQELPSQRA 310
RLRRFISQELPSQRA
Sbjct: 389 RLRRFISQELPSQRA 403
>gi|239746656 PREDICTED: hypothetical protein LOC729495 [Homo
sapiens]
Length = 403
Score = 564 bits (1454), Expect = e-161
Identities = 287/315 (91%), Positives = 289/315 (91%), Gaps = 12/315 (3%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGA-----APLGT 55
MNGLSLSELCCLFC PPCPGRIAAKLAFLPPEATYSLV PEPGPGGAGA PLG
Sbjct: 96 MNGLSLSELCCLFCYPPCPGRIAAKLAFLPPEATYSLV--PEPGPGGAGAWWGRGRPLGD 153
Query: 56 LRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVL 115
+G GRWKLHLTE ADFQYSQRELDTIEVFPTKSA GNRVSCMYVRCVPGARYTV
Sbjct: 154 ---PAGLLGRWKLHLTELADFQYSQRELDTIEVFPTKSAHGNRVSCMYVRCVPGARYTVF 210
Query: 116 FSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRT 175
FSHGNAVDLGQMSSFY GL SRLHCNI YDYSGYGAS+GRPSE NLYADIDAAWQALRT
Sbjct: 211 FSHGNAVDLGQMSSFYTGLNSRLHCNII-YDYSGYGASAGRPSEWNLYADIDAAWQALRT 269
Query: 176 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFP 235
RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT KTYCFDAFP
Sbjct: 270 RYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDT-KTYCFDAFP 328
Query: 236 NIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 295
NIEKVSKITSPVLIIHG EDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE
Sbjct: 329 NIEKVSKITSPVLIIHGMEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLE 388
Query: 296 RLRRFISQELPSQRA 310
RLRRFISQELPSQRA
Sbjct: 389 RLRRFISQELPSQRA 403
>gi|151301175 hypothetical protein LOC58489 [Homo sapiens]
Length = 329
Score = 503 bits (1296), Expect = e-143
Identities = 237/321 (73%), Positives = 275/321 (85%), Gaps = 14/321 (4%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MNG SL ELC LFCCPPCP RIAAKLAFLPPE TY+++ + G G + AP A++
Sbjct: 8 MNGFSLGELCWLFCCPPCPSRIAAKLAFLPPEPTYTVLAPEQRGAGASAPAPAQATAAAA 67
Query: 61 GA--------------PGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRC 106
A PG LHL+ERAD+QYSQRELD +EVF +++AR NR+ CM+VRC
Sbjct: 68 AAQPAPQQPEEGAGAGPGACSLHLSERADWQYSQRELDAVEVFFSRTARDNRLGCMFVRC 127
Query: 107 VPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADI 166
P +RYT+LFSHGNAVDLGQM SFYIGLGSR++CNIFSYDYSGYG SSG+PSE+NLYADI
Sbjct: 128 APSSRYTLLFSHGNAVDLGQMCSFYIGLGSRINCNIFSYDYSGYGVSSGKPSEKNLYADI 187
Query: 167 DAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTK 226
DAAWQALRTRYG+SP++IILYGQSIGTVPTVDLASRYECAAV+LHSPL SG+RVAFPDT+
Sbjct: 188 DAAWQALRTRYGVSPENIILYGQSIGTVPTVDLASRYECAAVILHSPLMSGLRVAFPDTR 247
Query: 227 KTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHND 286
KTYCFDAFP+I+K+SK+TSPVL+IHGTEDEVIDFSHGLA+YERCP+AVEPLWVEGAGHND
Sbjct: 248 KTYCFDAFPSIDKISKVTSPVLVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHND 307
Query: 287 IELYSQYLERLRRFISQELPS 307
IELY+QYLERL++FIS ELP+
Sbjct: 308 IELYAQYLERLKQFISHELPN 328
>gi|71051602 family with sequence similarity 108, member B1 isoform
2 [Homo sapiens]
Length = 288
Score = 482 bits (1241), Expect = e-136
Identities = 227/305 (74%), Positives = 266/305 (87%), Gaps = 20/305 (6%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MN LS SELCCLFCCPPCPG+IA+KLAFLPP+ TY+L+ + S
Sbjct: 1 MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCD------------------ES 42
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
G+ RW LHL+ERAD+QYS RE D IE F T++++GNR++CM+VRC P A+YT+LFSHGN
Sbjct: 43 GS--RWTLHLSERADWQYSSREKDAIECFMTRTSKGNRIACMFVRCSPNAKYTLLFSHGN 100
Query: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
AVDLGQMSSFYIGLGSR++CNIFSYDYSGYGASSG+P+E+NLYADI+AAW ALRTRYGI
Sbjct: 101 AVDLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIR 160
Query: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
P+++I+YGQSIGTVP+VDLA+RYE AAV+LHSPLTSGMRVAFPDTKKTYCFDAFPNI+K+
Sbjct: 161 PENVIIYGQSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNIDKI 220
Query: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
SKITSPVLIIHGTEDEVIDFSHGLAL+ERC + VEPLWVEGAGHND+ELY QYLERL++F
Sbjct: 221 SKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLERLKQF 280
Query: 301 ISQEL 305
+SQEL
Sbjct: 281 VSQEL 285
>gi|71051600 family with sequence similarity 108, member B1 isoform
1 [Homo sapiens]
Length = 293
Score = 482 bits (1241), Expect = e-136
Identities = 227/305 (74%), Positives = 266/305 (87%), Gaps = 20/305 (6%)
Query: 1 MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASS 60
MN LS SELCCLFCCPPCPG+IA+KLAFLPP+ TY+L+ + S
Sbjct: 1 MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCD------------------ES 42
Query: 61 GAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGN 120
G+ RW LHL+ERAD+QYS RE D IE F T++++GNR++CM+VRC P A+YT+LFSHGN
Sbjct: 43 GS--RWTLHLSERADWQYSSREKDAIECFMTRTSKGNRIACMFVRCSPNAKYTLLFSHGN 100
Query: 121 AVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGIS 180
AVDLGQMSSFYIGLGSR++CNIFSYDYSGYGASSG+P+E+NLYADI+AAW ALRTRYGI
Sbjct: 101 AVDLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIR 160
Query: 181 PDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKV 240
P+++I+YGQSIGTVP+VDLA+RYE AAV+LHSPLTSGMRVAFPDTKKTYCFDAFPNI+K+
Sbjct: 161 PENVIIYGQSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNIDKI 220
Query: 241 SKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRF 300
SKITSPVLIIHGTEDEVIDFSHGLAL+ERC + VEPLWVEGAGHND+ELY QYLERL++F
Sbjct: 221 SKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLERLKQF 280
Query: 301 ISQEL 305
+SQEL
Sbjct: 281 VSQEL 285
>gi|49355781 abhydrolase domain containing 13 [Homo sapiens]
Length = 337
Score = 78.6 bits (192), Expect = 7e-15
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 113 TVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQA 172
T+++ HGNA ++G + + L N+ DY GYG S G SE LY D +A
Sbjct: 116 TIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDY 175
Query: 173 LRTRYGISPDSIILYGQSIGTVPTVDLASR--YECAAVVLHSPLTSGMRVA------FP- 223
+ TR + I L+G+S+G + LAS + +A+++ + S +A FP
Sbjct: 176 VMTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM 235
Query: 224 DTKKTYCF-DAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGA 282
+C+ + F + K+S+ P L I G D++I LYE P + L +
Sbjct: 236 RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPD 295
Query: 283 G-HNDIELYSQYLERLRRFISQELPS 307
G HND Y L +FI + + S
Sbjct: 296 GTHNDTWQCQGYFTALEQFIKEVVKS 321
>gi|32528310 abhydrolase domain containing 12B isoform c [Homo
sapiens]
Length = 285
Score = 69.3 bits (168), Expect = 4e-12
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 101 CMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLH---CNIFSYDYSGYGASSGRP 157
C Y + +++ HG+A + +S + L L ++ S DY G+G S+G+P
Sbjct: 52 CWYEAALRDGNPIIVYLHGSAEH--RAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKP 109
Query: 158 SERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYE-----CAAVVLHS 212
+E L D ++ + R GI+P + L+G S+GT + A E A+VL +
Sbjct: 110 TEEGLTTDAICVYEWTKARSGITP--VCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEA 167
Query: 213 PLTSGMRVA------------FPDTKKTYCFDA-------FPNIEKVSKITSPVLIIHGT 253
P T+ M VA P +T DA FPN E V ++SP+LI+HG
Sbjct: 168 PFTN-MWVASINYPLLKIYRNIPGFLRTL-MDALRKDKIIFPNDENVKFLSSPLLILHGE 225
Query: 254 EDEVIDFSHGLALYE 268
+D + +G LYE
Sbjct: 226 DDRTVPLEYGKKLYE 240
>gi|32451492 abhydrolase domain containing 12B isoform b [Homo
sapiens]
Length = 255
Score = 69.3 bits (168), Expect = 4e-12
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 101 CMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLH---CNIFSYDYSGYGASSGRP 157
C Y + +++ HG+A + +S + L L ++ S DY G+G S+G+P
Sbjct: 22 CWYEAALRDGNPIIVYLHGSAEH--RAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKP 79
Query: 158 SERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYE-----CAAVVLHS 212
+E L D ++ + R GI+P + L+G S+GT + A E A+VL +
Sbjct: 80 TEEGLTTDAICVYEWTKARSGITP--VCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEA 137
Query: 213 PLTSGMRVA------------FPDTKKTYCFDA-------FPNIEKVSKITSPVLIIHGT 253
P T+ M VA P +T DA FPN E V ++SP+LI+HG
Sbjct: 138 PFTN-MWVASINYPLLKIYRNIPGFLRTL-MDALRKDKIIFPNDENVKFLSSPLLILHGE 195
Query: 254 EDEVIDFSHGLALYE 268
+D + +G LYE
Sbjct: 196 DDRTVPLEYGKKLYE 210
>gi|109689718 abhydrolase domain containing 12 isoform a [Homo
sapiens]
Length = 398
Score = 62.8 bits (151), Expect = 4e-10
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 78 YSQRELD-TIEVFPT------KSARGNRVSCMYVRCVPGARYTVLFSHGNAVDLG--QMS 128
Y Q E D TI V+ T K+A+G + Y + + +L+ HGNA G
Sbjct: 129 YLQPEEDVTIGVWHTVPAVWWKNAQG-KDQMWYEDALASSHPIILYLHGNAGTRGGDHRV 187
Query: 129 SFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYG 188
Y L S L ++ ++DY G+G S G PSER + D + ++ R G +P + ++G
Sbjct: 188 ELYKVLSS-LGYHVVTFDYRGWGDSVGTPSERGMTYDALHVFDWIKARSGDNP--VYIWG 244
Query: 189 QSIGTVPTVDLASRYECA------AVVLHSPLTSGMRVA-----------FPD------T 225
S+GT +L R C A++L SP T+ A FP
Sbjct: 245 HSLGTGVATNLVRRL-CERETPPDALILESPFTNIREEAKSHPFSVIYRYFPGFDWFFLD 303
Query: 226 KKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALY 267
T F N E V I+ P+LI+H +D V+ F G LY
Sbjct: 304 PITSSGIKFANDENVKHISCPLLILHAEDDPVVPFQLGRKLY 345
>gi|24308097 abhydrolase domain containing 12 isoform b [Homo
sapiens]
Length = 404
Score = 62.8 bits (151), Expect = 4e-10
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 78 YSQRELD-TIEVFPT------KSARGNRVSCMYVRCVPGARYTVLFSHGNAVDLG--QMS 128
Y Q E D TI V+ T K+A+G + Y + + +L+ HGNA G
Sbjct: 129 YLQPEEDVTIGVWHTVPAVWWKNAQG-KDQMWYEDALASSHPIILYLHGNAGTRGGDHRV 187
Query: 129 SFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYG 188
Y L S L ++ ++DY G+G S G PSER + D + ++ R G +P + ++G
Sbjct: 188 ELYKVLSS-LGYHVVTFDYRGWGDSVGTPSERGMTYDALHVFDWIKARSGDNP--VYIWG 244
Query: 189 QSIGTVPTVDLASRYECA------AVVLHSPLTSGMRVA-----------FPD------T 225
S+GT +L R C A++L SP T+ A FP
Sbjct: 245 HSLGTGVATNLVRRL-CERETPPDALILESPFTNIREEAKSHPFSVIYRYFPGFDWFFLD 303
Query: 226 KKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALY 267
T F N E V I+ P+LI+H +D V+ F G LY
Sbjct: 304 PITSSGIKFANDENVKHISCPLLILHAEDDPVVPFQLGRKLY 345
>gi|15100151 HLA-B associated transcript 5 [Homo sapiens]
Length = 558
Score = 45.4 bits (106), Expect = 6e-05
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 96 GNRVSCMYV----RCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYG 151
GN + M+V P + V+ GNA G + ++ +++ G+
Sbjct: 260 GNEIDTMFVDRRGTAEPQGQKLVICCEGNA---GFYEVGCVSTPLEAGYSVLGWNHPGFA 316
Query: 152 ASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRY-ECAAVVL 210
S+G P +N +D Q R G P II+Y SIG A Y + +A++L
Sbjct: 317 GSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDIIIYAWSIGGFTATWAAMSYPDVSAMIL 376
Query: 211 HSPLTSGMRVA---FPD------TKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVI 258
+ + +A PD T+ N E++ + PVL+I T+DE+I
Sbjct: 377 DASFDDLVPLALKVMPDSWRGLVTRTVRQHLNLNNAEQLCRYQGPVLLIRRTKDEII 433
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 33.9 bits (76), Expect = 0.19
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 24 AKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPGRWKLHLTERADFQYSQREL 83
A L FLPP A V PGG AAP G L A++ + L + + +Q
Sbjct: 24 APLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAAAVAAKINAMLMAKGKLKPTQNAS 83
Query: 84 DTIEVFPTKSARGNR 98
+ ++ P K N+
Sbjct: 84 EKLQA-PGKGLTSNK 97
>gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens]
Length = 386
Score = 33.5 bits (75), Expect = 0.25
Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 21/166 (12%)
Query: 41 PEPGPGGAGAAP---LGTLRASSGAPGRWKLHLTERADFQY-SQRELDTIEVFPTKSARG 96
P PG GG+ + +G R +P W + D + ++ DT V+ + S
Sbjct: 18 PLPGSGGSQSGAKMRMGPGRKRDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGP 77
Query: 97 NRVSCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGR 156
+L HG + F + SR+ C I + D +G + +
Sbjct: 78 ----------------VLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVK 121
Query: 157 -PSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLAS 201
P + + + YG P I+L G S+G V AS
Sbjct: 122 NPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTAS 167
>gi|28629871 hypothetical protein LOC140701 [Homo sapiens]
Length = 469
Score = 32.7 bits (73), Expect = 0.42
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 141 NIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLA 200
++ +++ G+G+S+G P ++ +D + R P +++YG S+G
Sbjct: 198 SVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWAT 257
Query: 201 SRY-ECAAVVLHSPLTSGMRVA---FPDTKKTYCFDAFPN------IEKVSKITSPVLII 250
Y E A+VL + + +A P + K E++ PVL++
Sbjct: 258 MTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLL 317
Query: 251 HGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIEL 289
T+D+V+ S L + + P VEG N++ L
Sbjct: 318 RRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
Length = 549
Score = 32.0 bits (71), Expect = 0.72
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 32 EATYSLVPEPEPGPGGAGAAPLGTLRASSGAPGR---WKLHLTERADFQYS-QRELDTI- 86
E T SL+ P+ G A++G P W+ L E S E TI
Sbjct: 169 EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATII 228
Query: 87 ---EVFPTKSARGNRVSCM--YVRCVPGARYTVLFSHGNAVDL---GQMSSFYIG-LGSR 137
++FPT+ ARG R++C+ + RY+ + A ++ G ++++G G
Sbjct: 229 SQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVN 288
Query: 138 LHCNIFSYDYSGYGASSGRPSERNLYADIDAAW 170
L CN A + P +++++ +D W
Sbjct: 289 LKCN----------ADANPPPFKSVWSRLDGQW 311
>gi|86792774 dipeptidyl-peptidase 6 isoform 1 [Homo sapiens]
Length = 865
Score = 31.6 bits (70), Expect = 0.94
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 20 GRIAAKLAF-LPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAP 63
G+I +F PPEA++ L + GGAGA PLG RA + AP
Sbjct: 10 GKINTSRSFPAPPEASHLLGGQGPEEDGGAGAKPLGP-RAQAAAP 53
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 0.94
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 15 CPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPG 64
CPPCP + FLPP + L P PG GG A G L+ +G G
Sbjct: 202 CPPCPHASS----FLPPGQSRCL-RLPLPGGGGGQRALQGRLKTQAGKRG 246
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 0.94
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 15 CPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPG 64
CPPCP + FLPP + L P PG GG A G L+ +G G
Sbjct: 202 CPPCPHASS----FLPPGQSRCL-RLPLPGGGGGQRALQGRLKTQAGKRG 246
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 0.94
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 15 CPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPG 64
CPPCP + FLPP + L P PG GG A G L+ +G G
Sbjct: 202 CPPCPHASS----FLPPGQSRCL-RLPLPGGGGGQRALQGRLKTQAGKRG 246
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 30.8 bits (68), Expect = 1.6
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 39 PEPEPGPGG--AGAAPLGTLRASSGAPG 64
P P PGP G AGA P GT A +G PG
Sbjct: 3862 PAPGPGPAGVKAGARPGGTPGAPAGQPG 3889
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 30.4 bits (67), Expect = 2.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 21 RIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRA 58
R+A + +PP P+ PGPG AAP LRA
Sbjct: 67 RLARRCPRVPPSLGVLPAPDGGPGPGSGPAAPTTVLRA 104
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 30.0 bits (66), Expect = 2.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 29 LPPEATYSLVPEPEPGPGGAGAAPL 53
L A S + +P PGPGG G APL
Sbjct: 425 LAGRAGQSKISDPGPGPGGVGGAPL 449
>gi|8922157 proline rich 13 isoform 1 [Homo sapiens]
Length = 148
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 15 CPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLG 54
CPP PG AF PP P P P PG G PLG
Sbjct: 41 CPPPPGAPHGNPAF-PPGGP----PHPVPQPGYPGCQPLG 75
>gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens]
Length = 465
Score = 29.6 bits (65), Expect = 3.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 19 PGRIAAKLAFLPPEATY----SLVPEPEPGPGGAGAAPLGTLRASSGAPG 64
P R PP T L PE GPGGA A PL T +GAPG
Sbjct: 246 PSRRGPDAVAAPPGGTERRPNGLGPERSAGPGGAEAEPLPT--QLNGAPG 293
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 29.6 bits (65), Expect = 3.6
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 16 PPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAP------LGTLRASSGAPGRWKLH 69
PP PG + PE + + P P PGPG G+A RA+ G +
Sbjct: 132 PPPPGGPS-------PEPSPARTPAPSPGPGSCGSASPRSSPGHAPARAALGTASGHRAG 184
Query: 70 LTERADFQYSQRELDTIEVFPT 91
LT R S + DT+EV T
Sbjct: 185 LTSRD--TPSPVDPDTVEVLMT 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,713,876
Number of Sequences: 37866
Number of extensions: 703377
Number of successful extensions: 3131
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3059
Number of HSP's gapped (non-prelim): 87
length of query: 310
length of database: 18,247,518
effective HSP length: 102
effective length of query: 208
effective length of database: 14,385,186
effective search space: 2992118688
effective search space used: 2992118688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.