Guide to the Human Genome
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Name: PPME1 Sequence: fasta or formatted (386aa) NCBI GI: 7706645
Description:

protein phosphatase methylesterase 1

Referenced in:

Serine / Threonine Protein Phosphatases
Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         25           2
 C cysteine            1.8          7           1
 D aspartate           4.9         19           2
 E glutamate           8.5         33           5
 F phenylalanine       3.4         13           1
 G glycine             9.6         37           3
 H histidine           2.6         10           1
 I isoleucine          4.9         19           2
 K lysine              6.2         24           2
 L leucine             8.8         34           4
 M methionine          4.1         16           1
 N asparagine          2.3          9           1
 P proline             5.7         22           3
 Q glutamine           3.4         13           1
 R arginine            4.9         19           1
 S serine              8.8         34           2
 T threonine           3.6         14           1
 V valine              7.0         27           2
 W tryptophan          1.6          6           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase methylesterase 1 
ABHD11                0.029   abhydrolase domain containing 11 isoform 1 
ABHD11                0.028   abhydrolase domain containing 11 isoform 2 
MGLL                  0.025   monoglyceride lipase isoform 2 
MGLL                  0.025   monoglyceride lipase isoform 1 
EPHX4                 0.024   abhydrolase domain containing 7 
ABHD11                0.021   abhydrolase domain containing 11 isoform 8 
EPHX3                 0.020   abhydrolase domain containing 9 
EPHX3                 0.020   abhydrolase domain containing 9 
ABHD6                 0.013   abhydrolase domain containing 6 
ABHD12B               0.013   abhydrolase domain containing 12B isoform c 
ABHD12B               0.013   abhydrolase domain containing 12B isoform b 
RSHL1                 0.012   radial spokehead-like 1 
FAM108A1              0.011   hypothetical protein LOC81926 isoform 2 
ABHD13                0.011   abhydrolase domain containing 13 
PPP1R12B              0.011   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.011   protein phosphatase 1, regulatory (inhibitor) subunit...
FAM108C1              0.011   hypothetical protein LOC58489 
RYR1                  0.009   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.009   skeletal muscle ryanodine receptor isoform 1 
PDIA4                 0.009   protein disulfide isomerase A4 
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent re...
FAM108A4              0.009   PREDICTED: hypothetical protein 
BCL9                  0.009   B-cell CLL/lymphoma 9 
TNRC6B                0.009   trinucleotide repeat containing 6B isoform 3 
LOC728026             0.009   PREDICTED: hypothetical protein 
LOC728026             0.009   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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