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Search of human proteins with 113420848
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 218 1e-57
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 214 9e-57
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 214 9e-57
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 214 9e-57
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 198 7e-52
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 194 2e-50
gi|46276863 parathymosin [Homo sapiens] 82 1e-16
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 60 5e-10
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 57 2e-09
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 57 2e-09
gi|55956788 nucleolin [Homo sapiens] 57 4e-09
gi|21361639 DIPB protein [Homo sapiens] 56 5e-09
gi|115529449 upstream binding transcription factor, RNA polymera... 56 5e-09
gi|115529451 upstream binding transcription factor, RNA polymera... 56 5e-09
gi|7657671 upstream binding transcription factor, RNA polymerase... 56 5e-09
gi|21735415 centromere protein B [Homo sapiens] 56 7e-09
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 56 7e-09
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 55 1e-08
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 54 2e-08
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 54 2e-08
gi|17975763 myelin transcription factor 1 [Homo sapiens] 54 2e-08
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 54 3e-08
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 52 1e-07
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 52 1e-07
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 52 1e-07
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 52 1e-07
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 52 1e-07
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 52 1e-07
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 51 2e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 51 2e-07
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 218 bits (554), Expect = 1e-57
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 214 bits (546), Expect = 9e-57
Identities = 107/109 (98%), Positives = 108/109 (99%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MSDAAVDTSSEIIAKDLKEKKEVVK+AENGRDAPANGNANEENGEQEAD EVDEEGEESG
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 214 bits (546), Expect = 9e-57
Identities = 107/109 (98%), Positives = 108/109 (99%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MSDAAVDTSSEIIAKDLKEKKEVVK+AENGRDAPANGNANEENGEQEAD EVDEEGEESG
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 214 bits (546), Expect = 9e-57
Identities = 107/109 (98%), Positives = 108/109 (99%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MSDAAVDTSSEIIAKDLKEKKEVVK+AENGRDAPANGNANEENGEQEAD EVDEEGEESG
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 198 bits (504), Expect = 7e-52
Identities = 101/110 (91%), Positives = 104/110 (94%), Gaps = 1/110 (0%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MSDAAVDTSSEI KDLKEKKEVV+EAENGRDAPANGNANEENGEQEAD EVDEE EE G
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
Query: 61 EEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 194 bits (492), Expect = 2e-50
Identities = 101/111 (90%), Positives = 104/111 (93%), Gaps = 2/111 (1%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNA-NEENGEQEADKEVDEEGEES 59
MSDAAVDTSSEI KDLKEKKEVV+EAENGRDAPANGNA NEENGEQEAD EVDEE EE
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
Query: 60 GEEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
GEEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 81.6 bits (200), Expect = 1e-16
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
MS+ +V+ ++E+ AKDLKEKKE V+E + ++ EENG +EE EE+
Sbjct: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
E+ EEE EG+ E+E+ +EE+ E KRAAE E+D+ D K+QKT+
Sbjct: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 59.7 bits (143), Expect = 5e-10
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD 77
+E+ E E E G + EE GE E ++E EEGE GE E EE EG+GEEE+G+
Sbjct: 983 EEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE--EEGEVEGEVEGEEGEGEGEEEEGE 1040
Query: 78 EE------EAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EE E E +R E++E++ + K Q+T +++
Sbjct: 1041 EEGEEREKEGEGEENRRNREEEEEE--EGKYQETGEEE 1076
Score = 58.9 bits (141), Expect = 8e-10
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDE-EGEESGEE-----EEEEKEGDG 71
+E++E E E G G EE GE + ++E +E EGEE GEE EEEE EG+G
Sbjct: 828 EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEG 887
Query: 72 EEE---DGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EEE +G+EEE E + + E+++ + K ++ ++
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
Score = 58.2 bits (139), Expect = 1e-09
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEE-----EEEEKEGDGEE 73
E++E E E+G E E+E + E +EEGE GEE EEEE EG+GEE
Sbjct: 933 EEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEE 992
Query: 74 EDGDEEEAESATGKRAAEDDEDDD 97
E+G+EE E G+ E + +++
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEE 1016
Score = 56.6 bits (135), Expect = 4e-09
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD- 77
E+KE E E G G EE E E ++E E EE GE EEEE EG GEEE +
Sbjct: 806 EEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEG 865
Query: 78 --EEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEE E G+ E+ E + + + + ++++
Sbjct: 866 EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Score = 55.5 bits (132), Expect = 9e-09
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEE------EEEKEGDGEEEDGD- 77
+E E G E E+E + E +EEGE GEEE EEE EG+GEEE+G+
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEG 919
Query: 78 --EEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EEE E G+ E+ E + D + + +++
Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 55.1 bits (131), Expect = 1e-08
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEV-DEEGEESGE-EEEEEKEGDGEEEDGDEEEAE 82
+E G G EE GE E ++E +EEGEE GE EEE E EG+ EEE E E E
Sbjct: 967 EEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVE 1026
Query: 83 SATGKRAAEDDEDDDVDTKKQK 104
G+ E++E ++ +++K
Sbjct: 1027 GEEGEGEGEEEEGEEEGEEREK 1048
Score = 53.9 bits (128), Expect = 3e-08
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 7 DTSSEIIAKDLKEKK-EVVKEAENGRDAPANGNANEENGE---QEADKEVDEEGEESGEE 62
+ E+ +++E K E +E E G G EE GE +E + + +EEGEE GE
Sbjct: 809 EEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEE-GEG 867
Query: 63 EEE--EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEE E EG+GEEE+G+ E E G+ E+ E + + + + ++++
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 916
Score = 53.1 bits (126), Expect = 5e-08
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKE---VDEEGEESGEEEEEEKEGDGEEED 75
E +E E E + G E GE E + E +EEGE GEEE EE EG+GEEE+
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936
Query: 76 GDEEEAESATGKRAAEDDE 94
G E E E G+ E+ E
Sbjct: 937 G-EGEGEDGEGEGEEEEGE 954
Score = 52.8 bits (125), Expect = 6e-08
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
++ E +E GR E GE E K EE EE GE EEEE EG+ EE +G+E
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 79 EEAESATGKRAAEDDEDDD 97
EE E G+ E+ E ++
Sbjct: 852 EEGE-GKGEEEGEEGEGEE 869
Score = 51.2 bits (121), Expect = 2e-07
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD 77
+E +E +E G + EE GE E + E EEGE GEEEE E+EG+ E++G+
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVE-GEEGEGEGEEEEGEEEGEEREKEGE 1051
Query: 78 EEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
E E+ + E++E +T +++ ++ D
Sbjct: 1052 GE--ENRRNREEEEEEEGKYQETGEEENERQD 1081
Score = 50.4 bits (119), Expect = 3e-07
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 11 EIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEE---EEK 67
E K+ K ++E + + G EE GE E + + +GE EEEE EE+
Sbjct: 779 ERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEE 838
Query: 68 EGDGEEEDGDEEEAESATGKRAAEDDEDD 96
EG+GEEE+G+ EE E GK E +E +
Sbjct: 839 EGEGEEEEGEGEE-EEGEGKGEEEGEEGE 866
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESA 84
+E E + G EE GE + ++E EEGE GEEEE E EG+ E +G+EEE E
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEE-GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE 956
Query: 85 TGKRAAEDDEDDD 97
+ E + +++
Sbjct: 957 GEEEEGEGEGEEE 969
Score = 50.1 bits (118), Expect = 4e-07
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 15 KDLKEKKE---------VVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEE 65
K+L EK+E KE E G N EE GE+E + +EEG+ EEEE
Sbjct: 694 KELAEKEEWKKRDGEEQEQKEREQGHQKERNQEM-EEGGEEEHGEGEEEEGDR---EEEE 749
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EKEG+G+EE G+ EE E K E +++ +++ ++ D
Sbjct: 750 EKEGEGKEE-GEGEEVEGEREKEEGERKKEERAGKEEKGEEEGD 792
Score = 50.1 bits (118), Expect = 4e-07
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGE---QEADKEVDEEGEESGEE--EEEEKEGDGE 72
+E+KE + + R+ EE+GE +E D+E +EE E G+E E EE EG+ E
Sbjct: 710 QEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGERE 769
Query: 73 EEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
+E+G+ ++ E A GK ++E D + ++++T+
Sbjct: 770 KEEGERKKEERA-GKEEKGEEEGDQGEGEEEETE 802
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD 77
+E++ K E G + G EE GE E + E EE GE E EE+EG+GE E+
Sbjct: 913 EEEEGEGKGEEEGEEG--EGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEG 970
Query: 78 EEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
E E E G+ E+ E + + + ++ +++
Sbjct: 971 EGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEE 1002
Score = 49.3 bits (116), Expect = 7e-07
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDE----EGEESGEEEEEEKEGDGEE 73
K + E+ + E ++ + +GE++ KE ++ E + EE EE+ G+GEE
Sbjct: 681 KGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEE 740
Query: 74 EDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
E+GD EE E G+ E+ E ++V+ +++K +
Sbjct: 741 EEGDREEEEEKEGE-GKEEGEGEEVEGEREKEE 772
Score = 48.9 bits (115), Expect = 9e-07
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADK------------EVDEEG---------E 57
E+ E +E E G EE GE+E D+ E EEG E
Sbjct: 762 EEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEE 821
Query: 58 ESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDD 97
GE EEEE+EG+GEEE+G+ EE E + E +++
Sbjct: 822 GKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEE 861
Score = 48.9 bits (115), Expect = 9e-07
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 11 EIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE--------- 61
E+ + KE+ E KE G++ ++ GE+E + EE EE GE
Sbjct: 763 EVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEG 822
Query: 62 -----EEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDD 97
EEEEE EG+ EE +G+EEE E + + +E+ +
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGE 863
Score = 48.9 bits (115), Expect = 9e-07
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEES--------------GEEEEEEKEGD 70
+E E + G EE GE E ++E + EGEE GE EEEE EG+
Sbjct: 881 EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE 940
Query: 71 GEEEDGDEEEAESATGKRAAEDDEDD 96
GE+ +G+ EE E G+ E++E +
Sbjct: 941 GEDGEGEGEEEE---GEWEGEEEEGE 963
Score = 47.8 bits (112), Expect = 2e-06
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 16 DLKEKKEVVKEA-ENGRDAPANGNANEENGEQEADKEV--DEEGEESG-----EEEEEEK 67
D +E++E E E G G +E GE++ ++ +E+GEE G EEEE E
Sbjct: 744 DREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEG 803
Query: 68 EGDGEEEDGDEEEAESATGKRAAEDDEDD 96
G+ +EE G+ E E GK E++E++
Sbjct: 804 RGEEKEEGGEVEGGEVEEGKGEREEEEEE 832
Score = 47.0 bits (110), Expect = 3e-06
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 20 KKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEE-------EEKEGDGE 72
+KE +E E G + +G EE G++E ++E + EG+E GE EE EE E E
Sbjct: 720 QKERNQEMEEGGEEE-HGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKE 778
Query: 73 EEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
E G EE+ E + E++E + +K++
Sbjct: 779 ERAGKEEKGEEEGDQGEGEEEETEGRGEEKEE 810
Score = 46.2 bits (108), Expect = 6e-06
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 30 GRDAPANGNANEENGEQEADKEVDEEGEESGEE-----EEEEKEGDGEEEDGDEEEAESA 84
G + G EE E E + E +EEGE GE+ EEEE E +GEEE+G+ E E
Sbjct: 912 GEEEEGEGKGEEEGEEGEGEGE-EEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEG 970
Query: 85 TGKRAAEDDEDDDVDTKKQKTDKD 108
G+ + E ++ + + + +++
Sbjct: 971 EGEGEEGEGEGEEEEGEGEGEEEE 994
Score = 43.9 bits (102), Expect = 3e-05
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEAD-KEVDEEGEESGEEEEEEKEGDGEEEDG 76
+E+ EV E E G EE GE+E + +E + EGEE+ EEE+E +G+ ++
Sbjct: 1016 EEEGEVEGEVEGEE---GEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQET 1072
Query: 77 DEEEAESATGK 87
EEE E G+
Sbjct: 1073 GEEENERQDGE 1083
Score = 43.1 bits (100), Expect = 5e-05
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD 77
+E+ + +E E + G E GE+E ++ ++ E +G+EE+ E+EGD + +G+
Sbjct: 740 EEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGD--QGEGE 797
Query: 78 EEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EEE E G+ E E + + ++ K ++++
Sbjct: 798 EEETE-GRGEEKEEGGEVEGGEVEEGKGEREE 828
Score = 33.9 bits (76), Expect = 0.029
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 7 DTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEE 66
+ E+ ++ + + E + E G + G E +E ++E + + +E+GEEE E
Sbjct: 1020 EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079
Query: 67 KEGD 70
++G+
Sbjct: 1080 QDGE 1083
Score = 32.7 bits (73), Expect = 0.064
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 23/106 (21%)
Query: 19 EKKEVVKEAENGRDAPANG------NANEEN-----GEQE-----ADKEVDEEGEESGEE 62
E+ E+ +E E D+ NG ANEEN G +E +D D+ G+
Sbjct: 582 EEVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKA 641
Query: 63 EEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
+ + DG E GD E ++G +D+E ++K +KD
Sbjct: 642 KSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEE-------REKGEKD 680
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEV-DEEGEESGEEEEEEKEGDGEEEDGD 77
E+ E E E G + G E+ GE E ++ +EE EE G+ +E +E + E +DG+
Sbjct: 1028 EEGEGEGEEEEGEE---EGEEREKEGEGEENRRNREEEEEEEGKYQETGEE-ENERQDGE 1083
Query: 78 E 78
E
Sbjct: 1084 E 1084
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 45 EQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
E +D+EV+ E+ G E+ + + +E + +EE + G++ + DD+ K +
Sbjct: 577 EAFSDEEVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEV 636
Query: 105 TD 106
++
Sbjct: 637 SE 638
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 57.4 bits (137), Expect = 2e-09
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 32 DAPANGNANEENG---------EQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
D N NEE G E E D E DEE +E GEEEEEE+E + EEE+ +EEE E
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 83 SATGKRAAEDDEDDDVDTKKQKTD 106
+ +E +D DT+ + +D
Sbjct: 252 Q---DERDQKEEGNDYDTRSEASD 272
Score = 53.5 bits (127), Expect = 4e-08
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 14 AKDLKEKKEVVKEAENGRD--APANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDG 71
++ + KE V E G D ++G+++E+ E ++E EE E EE EE+ E D
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 72 E-EEDGDEEEAESATGKRAAEDDEDD-DVDTKKQKTDKDD 109
E +EDG+EEE E + E++E++ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 52.0 bits (123), Expect = 1e-07
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 14 AKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE--EEEEEKEGDG 71
+K+ +E + E G ++ N E+E +E EE EE E EE+EE + DG
Sbjct: 170 SKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDG 229
Query: 72 EEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EEE+ +EEE E + E+ E D+ D K++ D D
Sbjct: 230 EEEE-EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 7 DTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEE 66
+ E + +D++E +EV ++AE + +G EE E+E ++E +EE E +E +++
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Query: 67 KEGD-----GEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+EG+ E D E G + D + KK++
Sbjct: 259 EEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKER 301
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 22 EVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEA 81
EV + A + +EE G E+ E EE +G EED +E+E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEE---EGVEEDVEEDEE 214
Query: 82 ESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+ E DED + + ++++ ++++
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEE 242
Score = 32.3 bits (72), Expect = 0.084
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEG----- 56
+D + SS + K + E K RD + +G + EVD
Sbjct: 111 ADRKIRLSSSASREPYKNQPE--KTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQ 168
Query: 57 --------EESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EE G + E G +E+ + E E + ED+E ++ + ++ D+D
Sbjct: 169 SSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDED 228
Score = 32.3 bits (72), Expect = 0.084
Identities = 18/83 (21%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 30 GRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDG--EEEDGDEEEAESATGK 87
G + + + ++ ++E + E E+G +++G+ EE+G EE+ E +
Sbjct: 156 GLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEE--DE 213
Query: 88 RAAED-DEDDDVDTKKQKTDKDD 109
ED +ED++VD ++ ++++
Sbjct: 214 EVEEDAEEDEEVDEDGEEEEEEE 236
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 57.4 bits (137), Expect = 2e-09
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 32 DAPANGNANEENG---------EQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
D N NEE G E E D E DEE +E GEEEEEE+E + EEE+ +EEE E
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 83 SATGKRAAEDDEDDDVDTKKQKTD 106
+ +E +D DT+ + +D
Sbjct: 252 Q---DERDQKEEGNDYDTRSEASD 272
Score = 53.5 bits (127), Expect = 4e-08
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 14 AKDLKEKKEVVKEAENGRD--APANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDG 71
++ + KE V E G D ++G+++E+ E ++E EE E EE EE+ E D
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 72 E-EEDGDEEEAESATGKRAAEDDEDD-DVDTKKQKTDKDD 109
E +EDG+EEE E + E++E++ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 52.0 bits (123), Expect = 1e-07
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 14 AKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE--EEEEEKEGDG 71
+K+ +E + E G ++ N E+E +E EE EE E EE+EE + DG
Sbjct: 170 SKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDG 229
Query: 72 EEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EEE+ +EEE E + E+ E D+ D K++ D D
Sbjct: 230 EEEE-EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Score = 48.9 bits (115), Expect = 9e-07
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 7 DTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEE 66
+ E + +D++E +EV ++AE + +G EE E+E ++E +EE E +E +++
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Query: 67 KEGD-----GEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+EG+ E D E G + D + KK++
Sbjct: 259 EEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKER 301
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 22 EVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEA 81
EV + A + +EE G E+ E EE +G EED +E+E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEE---EGVEEDVEEDEE 214
Query: 82 ESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+ E DED + + ++++ ++++
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEE 242
Score = 32.3 bits (72), Expect = 0.084
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEG----- 56
+D + SS + K + E K RD + +G + EVD
Sbjct: 111 ADRKIRLSSSASREPYKNQPE--KTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQ 168
Query: 57 --------EESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
EE G + E G +E+ + E E + ED+E ++ + ++ D+D
Sbjct: 169 SSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDED 228
Score = 32.3 bits (72), Expect = 0.084
Identities = 18/83 (21%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 30 GRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDG--EEEDGDEEEAESATGK 87
G + + + ++ ++E + E E+G +++G+ EE+G EE+ E +
Sbjct: 156 GLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEE--DE 213
Query: 88 RAAED-DEDDDVDTKKQKTDKDD 109
ED +ED++VD ++ ++++
Sbjct: 214 EVEEDAEEDEEVDEDGEEEEEEE 236
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 56.6 bits (135), Expect = 4e-09
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 20 KKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEE 79
K V + G PA G N +N ++E + DEE ++ EE+EE D E+ED DE+
Sbjct: 116 KALVATPGKKGAAIPAKGAKNGKNAKKE---DSDEEEDDDSEEDEE----DDEDEDEDED 168
Query: 80 EAESATGKRAA-------EDDEDDDVDTKKQKTDKDD 109
E E A K AA EDDEDD+ D ++DD
Sbjct: 169 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDD 205
Score = 53.5 bits (127), Expect = 4e-08
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 42/127 (33%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEE-----------------SGEEEEEEK 67
K A+NG++A + EE+ + E D+E DE+ +E + E+E++E
Sbjct: 132 KGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDED 191
Query: 68 EGDGEEEDGDEE--------EAESATGKRAA-----------------EDDEDDDVDTKK 102
+ D E++D DEE E A GK+AA EDDED+D D +
Sbjct: 192 DEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDE 251
Query: 103 QKTDKDD 109
D DD
Sbjct: 252 DDEDDDD 258
Score = 44.3 bits (103), Expect = 2e-05
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 36/134 (26%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGR-----DAPANGNANEENGEQEADKEVDEEG 56
SD D SE +D +++ E E E APA+ + ++E+ E + D + DEE
Sbjct: 145 SDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Query: 57 EESGE------------------------EEEEEKEGDGEEEDGDEEEAESATGKRAAED 92
+ E E+E+E+E D +E+D D+E+ E +D
Sbjct: 205 DSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDED-------DD 257
Query: 93 DEDDDVDTKKQKTD 106
DEDD+ + ++++ +
Sbjct: 258 DEDDEEEEEEEEEE 271
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 38 NANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDD 97
N E+ E+E D++ D++ +E E++++E + + EEE+ +EE + A GKR E +
Sbjct: 231 NVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEE-EEEPVKEAPGKRKKEMAKQKA 289
Query: 98 V-DTKKQKTD 106
+ KKQK +
Sbjct: 290 APEAKKQKVE 299
Score = 33.5 bits (75), Expect = 0.038
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 14 AKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGE- 72
AK + K + V E E+ + + + +++ +++ D E DEE EE EEEE KE G+
Sbjct: 222 AKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEE-EEEEPVKEAPGKR 280
Query: 73 EEDGDEEEAESATGKRAAEDDE 94
+++ +++A K+ E E
Sbjct: 281 KKEMAKQKAAPEAKKQKVEGTE 302
Score = 29.3 bits (64), Expect = 0.71
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 33 APANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRA 89
A A N + KEV+E+ E+ E+EE + GEE +++ + A A
Sbjct: 5 AKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSA 61
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 56.2 bits (134), Expect = 5e-09
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENG-EQEADKEVDEEGEESGEEEEEEKEGDGEEED 75
+++++E+ EA ++ + EE+ E+E++ E DEE EE EEE E+++ EED
Sbjct: 85 VEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEED 144
Query: 76 GDEEEAESATGKRAAEDDEDDDVDTKKQKTDK 107
EE A G+ AE + D +++ + ++ K
Sbjct: 145 NQEEGESEAEGETEAESEFDPEIEMEAERVAK 176
Score = 55.5 bits (132), Expect = 9e-09
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 34 PANGNANEENGEQEADKEVDEEGE---ESGEEEEEEKEGDGEEEDGDEEEAESATGKRAA 90
PA+G E G++EA+ +V++E E E+GEE E E+E + EEE EEE+E + + +
Sbjct: 70 PADG---EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESE 126
Query: 91 EDDEDDDVDTKKQKTDKDD 109
ED E++ D ++ + ++D+
Sbjct: 127 EDSEEEMEDEQESEAEEDN 145
Score = 40.8 bits (94), Expect = 2e-04
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE 61
S+A ++ SE ++ +E+ E +E+E+ D + ++ EE E E + E +E+ +E GE
Sbjct: 93 SEAGEESESEEESES-EEESETEEESEDESDEESEEDSEEEM-EDEQESEAEEDNQEEGE 150
Query: 62 EEEE-EKEGDGEEEDGDEEEAESATGKRAAEDDED 95
E E E E + E + E EAE ++ + D
Sbjct: 151 SEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLD 185
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
E E EA +E + E EES EEE E E + E+E +E E +S + ED+++ + +
Sbjct: 88 EREIESEAGEESESE-EESESEEESETEEESEDESDEESEEDS---EEEMEDEQESEAEE 143
Query: 101 KKQKTDKDD 109
Q+ + +
Sbjct: 144 DNQEEGESE 152
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 56.2 bits (134), Expect = 5e-09
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
+ E E D E DE+ E+ EEEE+++ GD E+ GD E+ S +++E+DD D
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 101 KKQKTDKDD 109
+ D +D
Sbjct: 695 DDDEDDDED 703
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEE 74
+D +++ E ++ ENG + G+++E + E E+ E+G+E+ E++E+E + + ++E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES-----EDGDENEEDDEDEDDDEDDDE 702
Query: 75 DGDEEEAESATGKRAAEDDEDDD 97
D D E S++ ++ D D D
Sbjct: 703 DEDNESEGSSSSSSSSGDSSDSD 725
Score = 47.0 bits (110), Expect = 3e-06
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
E+ E ++ + + NG+++E+ G+ DE E G+E EE+ E + ++ED DE
Sbjct: 645 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES--EDGDENEEDDEDEDDDEDDDE 702
Query: 79 EEAESATGKRAAEDDEDDDVDT 100
+E + G ++ D D+
Sbjct: 703 DEDNESEGSSSSSSSSGDSSDS 724
Score = 44.7 bits (104), Expect = 2e-05
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDG 76
L+ K E ++ E D +E+ E+E D E + E+ G+ E E + E+ D
Sbjct: 634 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686
Query: 77 DEEEAESATGKRAAEDDEDDDVD 99
+EE+ E +DDEDDD D
Sbjct: 687 NEEDDED------EDDDEDDDED 703
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 56.2 bits (134), Expect = 5e-09
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
+ E E D E DE+ E+ EEEE+++ GD E+ GD E+ S +++E+DD D
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 101 KKQKTDKDD 109
+ D +D
Sbjct: 695 DDDEDDDED 703
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEE 74
+D +++ E ++ ENG + G+++E + E E+ E+G+E+ E++E+E + + ++E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES-----EDGDENEEDDEDEDDDEDDDE 702
Query: 75 DGDEEEAESATGKRAAEDDEDDD 97
D D E S++ ++ D D D
Sbjct: 703 DEDNESEGSSSSSSSSGDSSDSD 725
Score = 47.0 bits (110), Expect = 3e-06
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
E+ E ++ + + NG+++E+ G+ DE E G+E EE+ E + ++ED DE
Sbjct: 645 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES--EDGDENEEDDEDEDDDEDDDE 702
Query: 79 EEAESATGKRAAEDDEDDDVDT 100
+E + G ++ D D+
Sbjct: 703 DEDNESEGSSSSSSSSGDSSDS 724
Score = 44.7 bits (104), Expect = 2e-05
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDG 76
L+ K E ++ E D +E+ E+E D E + E+ G+ E E + E+ D
Sbjct: 634 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686
Query: 77 DEEEAESATGKRAAEDDEDDDVD 99
+EE+ E +DDEDDD D
Sbjct: 687 NEEDDED------EDDDEDDDED 703
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 56.2 bits (134), Expect = 5e-09
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
+ E E D E DE+ E+ EEEE+++ GD E+ GD E+ S +++E+DD D
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 731
Query: 101 KKQKTDKDD 109
+ D +D
Sbjct: 732 DDDEDDDED 740
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEE 74
+D +++ E ++ ENG + G+++E + E E+ E+G+E+ E++E+E + + ++E
Sbjct: 685 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES-----EDGDENEEDDEDEDDDEDDDE 739
Query: 75 DGDEEEAESATGKRAAEDDEDDD 97
D D E S++ ++ D D D
Sbjct: 740 DEDNESEGSSSSSSSSGDSSDSD 762
Score = 47.0 bits (110), Expect = 3e-06
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
E+ E ++ + + NG+++E+ G+ DE E G+E EE+ E + ++ED DE
Sbjct: 682 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDES--EDGDENEEDDEDEDDDEDDDE 739
Query: 79 EEAESATGKRAAEDDEDDDVDT 100
+E + G ++ D D+
Sbjct: 740 DEDNESEGSSSSSSSSGDSSDS 761
Score = 44.7 bits (104), Expect = 2e-05
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDG 76
L+ K E ++ E D +E+ E+E D E + E+ G+ E E + E+ D
Sbjct: 671 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 723
Query: 77 DEEEAESATGKRAAEDDEDDDVD 99
+EE+ E +DDEDDD D
Sbjct: 724 NEEDDED------EDDDEDDDED 740
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 55.8 bits (133), Expect = 7e-09
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 19 EKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
E +E +E E + G EE GE+E +E EGEE GEEEE E+EGD + ++ +E
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEEEEEEGEEE--EEEGGEGEELGEEEEVEEEGDVDSDEEEE 461
Query: 79 EEAESATGKRAAED 92
E+ ES++ AED
Sbjct: 462 EDEESSSEGLEAED 475
Score = 55.8 bits (133), Expect = 7e-09
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 51 EVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAED---DEDDDVDTKKQKTDK 107
E +EE EE EEEEEE EG+ EEE+G+EEE E G+ E+ +E+ DVD+ +++ +
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEED 463
Query: 108 DD 109
++
Sbjct: 464 EE 465
Score = 51.6 bits (122), Expect = 1e-07
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
EE E+E ++E + EGEE EE EEE+E GE E+ EEE G ++++E++D ++
Sbjct: 407 EEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEES 466
Query: 101 KKQKTDKDD 109
+ + +D
Sbjct: 467 SSEGLEAED 475
Score = 44.7 bits (104), Expect = 2e-05
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 43/122 (35%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGD------- 70
+E+ E +E E G + G EE GE+E EV+EEG+ +EEEEE E
Sbjct: 417 EEEGEGEEEEEEGEEEEEEGGEGEELGEEE---EVEEEGDVDSDEEEEEDEESSSEGLEA 473
Query: 71 ---------------------------------GEEEDGDEEEAESATGKRAAEDDEDDD 97
GE+ D D EE + EDD+DD+
Sbjct: 474 EDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDE 533
Query: 98 VD 99
D
Sbjct: 534 ED 535
Score = 43.9 bits (102), Expect = 3e-05
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 29/136 (21%)
Query: 3 DAAVDTSSEIIAKDLKEKKEVVKEAEN-GRDAPANGNANEENGEQEADKEVDEEGEESG- 60
+A + TS + ++ +E++E +E E G + G EE G + + +EE EE G
Sbjct: 394 NATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGD 453
Query: 61 ------EEEEEEKEGDG-EEED---------------GDEEEAESAT-----GKRAAEDD 93
EEE+EE +G E ED G +EEA+ T G ++ D
Sbjct: 454 VDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSD 513
Query: 94 EDDDVDTKKQKTDKDD 109
+++ D ++ D+DD
Sbjct: 514 SEEEDDEEEDDEDEDD 529
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 42 ENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDE 78
E GE D + D E E+ EE++E+++ D +EEDGDE
Sbjct: 505 EGGE---DSDSDSEEEDDEEEDDEDEDDDDDEEDGDE 538
Score = 33.9 bits (76), Expect = 0.029
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 7 DTSSEIIAKDLKEKKEVVKEAENGRDA--PANGNANEENGEQEAD------KEVDEEGEE 58
D S+ ++ +E EAE+ A G+ ++EA E E+ +
Sbjct: 453 DVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDS 512
Query: 59 SGEEEEEEKEGDGEEEDGDEEE 80
EEE++E+E D +E+D D+EE
Sbjct: 513 DSEEEDDEEEDDEDEDDDDDEE 534
Score = 30.8 bits (68), Expect = 0.24
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 53 DEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
++ +S EE++EE++ + E++D DEE+ +
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDDEEDGD 537
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 55.8 bits (133), Expect = 7e-09
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 9 SSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKE 68
SS + D + E + E E + + +E E E D+E D E EE EEE+E+ +
Sbjct: 84 SSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDD 143
Query: 69 GDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKK----QKTDKDD 109
DGE+ + +EEE E + E++ED ++ Q T+KDD
Sbjct: 144 EDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDD 188
Score = 53.1 bits (126), Expect = 5e-08
Identities = 20/78 (25%), Positives = 50/78 (64%)
Query: 32 DAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAE 91
D+ + ++ +G ++ D++ ++EGEE E+ +E + D E+E+GD EE E + +
Sbjct: 83 DSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDD 142
Query: 92 DDEDDDVDTKKQKTDKDD 109
D++ +DV+ ++++ ++++
Sbjct: 143 DEDGEDVEDEEEEEEEEE 160
Score = 45.8 bits (107), Expect = 7e-06
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADK--EVDEEGEESGEEEEEEKEGDGEEED 75
K K VK + D + + E+ E+E D+ E E+ +E G+E+EE++ +G+ E+
Sbjct: 74 KRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDE--EGDREE 131
Query: 76 GDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+E E E ED ED++ + ++++ ++++
Sbjct: 132 EEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEE 165
Score = 31.6 bits (70), Expect = 0.14
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG- 60
+D D E D +E++E+ +E E+ + + EE E+E ++E +EE E+
Sbjct: 114 NDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQM 173
Query: 61 --------EEEEEEKEGDGEEEDGDEEEAES 83
++ E++ + E ++ DE A+S
Sbjct: 174 NCHNTRIMQDTEKDDNNNDEYDNYDELVAKS 204
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 55.1 bits (131), Expect = 1e-08
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 5 AVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEE 64
A D+ +E+ D +E+ E ++ E+ D +E +++ D E DE+ +E EEEE
Sbjct: 155 APDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEE 214
Query: 65 E-EKEGDGEEEDGDEEEAESATG---KRAAEDDEDDD 97
E + + E+ED DEEE E G KR +D+ +DD
Sbjct: 215 EFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
Score = 51.6 bits (122), Expect = 1e-07
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 36 NGNANEENGEQEADKEVD----EEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAE 91
+G E+ ++D EVD EE +E GE+EE+E + DGEEE+ DEE+ E E
Sbjct: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDED----EDVE 201
Query: 92 DDEDDDVDTKKQK 104
DEDDD +++++
Sbjct: 202 GDEDDDEVSEEEE 214
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEE-DGDEEEAES 83
+E + D+ A + +E E E ++ ++E +E GEEEE ++E D +E+ +GDE++ E
Sbjct: 150 REDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEV 209
Query: 84 ATGKR---AAEDDEDDDVDTKKQKTDKDD 109
+ + E+DED+D D ++++ K +
Sbjct: 210 SEEEEEFGLDEEDEDEDEDEEEEEGGKGE 238
Score = 50.4 bits (119), Expect = 3e-07
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 32 DAPANGNANEENGEQEADKEV--DEEGEES--GEEEEEEKEGDGEEEDGDEEEAESATGK 87
DA +G EE E+ D+E DE+GEE EE++E+++ +G+E+D + E E G
Sbjct: 159 DAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGL 218
Query: 88 RAAEDDEDDDVDT------KKQKTDKDD 109
++DED+D + +K+K + DD
Sbjct: 219 DEEDEDEDEDEEEEEGGKGEKRKRETDD 246
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 54.3 bits (129), Expect = 2e-08
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 22/105 (20%)
Query: 5 AVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG---- 60
A D+ +++ D +E+ E E E+ +D NE+ E+E D+E DE+ + G
Sbjct: 175 APDSDAQVDGVDKEEEDE---EGEDEKDXE-----NEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 61 ----EEEEE---EKEGDGEEEDGDEEEAESATG---KRAAEDDED 95
EEEEE +K+ D E+ED DEEE ES G KR +D+ED
Sbjct: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 52.4 bits (124), Expect = 8e-08
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 32 DAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEE-----EAESATG 86
DA +G EE E E + E D E E+ EEE +E+E + E+ +GD++ E E G
Sbjct: 179 DAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG 237
Query: 87 KRAAEDDEDDDVDTKKQKTDKDD 109
EDDED+D D +++++ K +
Sbjct: 238 LDKDEDDEDEDEDEEEEESGKGE 260
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 45 EQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+ E + D + + G ++EEE E +E+D + E+ E ++DED + D K +
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
Query: 105 TDKDD 109
+++
Sbjct: 229 VSEEE 233
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 3 DAAVDTSSEIIAKDLKEKKEVVKEAEN-GRDAPANGNANEENGEQEADKEVDEEGEESGE 61
D D ++ D +K EV +E E G D +E++ +++ D+E +E G+
Sbjct: 211 DEEEDEDEDVEGDD--DKDEVSEEEEEFGLDK------DEDDEDEDEDEEEEESGKGENR 262
Query: 62 EEEEEKEGDG 71
+ E + E DG
Sbjct: 263 KRETDDEEDG 272
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 54.3 bits (129), Expect = 2e-08
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 22/105 (20%)
Query: 5 AVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG---- 60
A D+ +++ D +E+ E E E+ +D NE+ E+E D+E DE+ + G
Sbjct: 175 APDSDAQVDGVDKEEEDE---EGEDEKDXE-----NEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 61 ----EEEEE---EKEGDGEEEDGDEEEAESATG---KRAAEDDED 95
EEEEE +K+ D E+ED DEEE ES G KR +D+ED
Sbjct: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 52.4 bits (124), Expect = 8e-08
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 32 DAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEE-----EAESATG 86
DA +G EE E E + E D E E+ EEE +E+E + E+ +GD++ E E G
Sbjct: 179 DAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG 237
Query: 87 KRAAEDDEDDDVDTKKQKTDKDD 109
EDDED+D D +++++ K +
Sbjct: 238 LDKDEDDEDEDEDEEEEESGKGE 260
Score = 35.8 bits (81), Expect = 0.008
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 45 EQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+ E + D + + G ++EEE E +E+D + E+ E ++DED + D K +
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
Query: 105 TDKDD 109
+++
Sbjct: 229 VSEEE 233
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 3 DAAVDTSSEIIAKDLKEKKEVVKEAEN-GRDAPANGNANEENGEQEADKEVDEEGEESGE 61
D D ++ D +K EV +E E G D +E++ +++ D+E +E G+
Sbjct: 211 DEEEDEDEDVEGDD--DKDEVSEEEEEFGLDK------DEDDEDEDEDEEEEESGKGENR 262
Query: 62 EEEEEKEGDG 71
+ E + E DG
Sbjct: 263 KRETDDEEDG 272
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 54.3 bits (129), Expect = 2e-08
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAED--DEDDDV 98
EE+ E+E ++E +EE EE EEEEEE+E + EEE+ +EEE E + AA D ++D
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Query: 99 DTKKQK 104
T QK
Sbjct: 319 HTSAQK 324
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 3 DAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEE 62
+ + S ++ + L++ + G + + EE E+E +++ +EE EE EE
Sbjct: 226 EVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEE 285
Query: 63 EEEEKEGDGEEEDGDEEEAESATGKRAAEDD 93
EEEE+E + EEE+ +EEE E A ++D
Sbjct: 286 EEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316
Score = 50.8 bits (120), Expect = 2e-07
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 39 ANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDD 97
A+EE+ +Q+ +EE EE EEEEEE+E + EEE+ +EEE E + E++E+++
Sbjct: 244 ASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 48.5 bits (114), Expect = 1e-06
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 1 MSDAAVDTSSEIIAKDL---KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGE 57
+ +AA +SE K L E E V E R + E+ +E+ K+ +G
Sbjct: 198 LQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQ---KGI 254
Query: 58 ESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
S EEE+EE+E + EEE+ DEEE E + E++E+++ + ++++ ++++
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Score = 48.1 bits (113), Expect = 1e-06
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 29/132 (21%)
Query: 1 MSDAAVDTSSE---IIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGE 57
+ DAA + SS+ I++ + ++++E +E E D EE E+E ++E +EE E
Sbjct: 240 LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDE------EEEEEEEEEEEEEEEEEE 293
Query: 58 ESGEEEEEEKEGDGE-----EEDGDEEEAESATGKRAAE---------------DDEDDD 97
E EEEEEE+E + +ED A+ A R E D+D D
Sbjct: 294 EEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKD 353
Query: 98 VDTKKQKTDKDD 109
DT +K+ D
Sbjct: 354 EDTHSRKSTVTD 365
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 53.9 bits (128), Expect = 3e-08
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 41 EENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDT 100
EE +E ++EV+EE +E E+EE+E+E + EEE ++EE E GK+ E+ ++++DT
Sbjct: 119 EEEEVEEEEEEVEEEEKEE-EKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDT 177
Query: 101 KKQKT 105
+ Q+T
Sbjct: 178 EIQRT 182
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 57 EESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDK 107
EE EEEEEE E + +EE+ +E+E E + ED+E+++ + KK + +K
Sbjct: 120 EEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEK 170
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 5 AVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEE-E 63
+V ++ ++A++ ++ + E E + E+ E+E D+E +E+ EE E+ E
Sbjct: 98 SVARTAALVAEECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEE 157
Query: 64 EEEKEGDGEEEDGDEEEAES 83
EEEKEG EE+ EEE ++
Sbjct: 158 EEEKEGKKMEEEKVEEEIDT 177
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGE 72
++++E++E V+E E + + E+ E+E D+E +E+ + EEE+ E+E D E
Sbjct: 121 EEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/45 (31%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 65 EEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EE+E + EEE+ +EEE E + ED+E+++ + +K++ ++++
Sbjct: 119 EEEEVEEEEEEVEEEEKE----EEKEEDEEEEEKEEEKEEDEEEE 159
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 62 EEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
EE ++G EE+ EEE E + E+ E+D+ + +K++ ++D
Sbjct: 108 EECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEED 155
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 38 NANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESAT-----GKRAAED 92
N EE E+E D+E +EE EE EEEEEE+E + EEE+ +EE A + G R+
Sbjct: 730 NGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSS 789
Query: 93 DEDDDVDTKKQK 104
E + T + +
Sbjct: 790 SEGSERSTDRSQ 801
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 57 EESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
+ +G+EEEEE EE+ +EEE E + E++E+++ + ++++ +
Sbjct: 728 QANGKEEEEE------EEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEE-------GEESGEEEEEEKEGD 70
+E++E E E D EE E+E ++E +EE GE G EG
Sbjct: 734 EEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGS 793
Query: 71 GEEEDGDEEEAES 83
D +E A S
Sbjct: 794 ERSTDRSQEGAPS 806
Score = 29.3 bits (64), Expect = 0.71
Identities = 9/46 (19%), Positives = 29/46 (63%)
Query: 64 EEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+ + G EEE+ +E+E E + E++E+++ + ++++ ++++
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 20 KKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEE 79
K+E +E E+ + + EE E+E ++E +EE EE E G E
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSE 791
Query: 80 EAESATGK 87
+E +T +
Sbjct: 792 GSERSTDR 799
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 52.0 bits (123), Expect = 1e-07
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 28/129 (21%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAEN----------GRDAPANGNANEENGEQEADK 50
M +A + E+ +EKKE +E E + +P A E E+E +K
Sbjct: 469 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVK-EEEGEK 527
Query: 51 EVDEEGEESGEEEEE------------EKEGDGEEEDGDEEEAES---ATGKRAAEDDED 95
E +EEG+E EEE+E EKEG E+E+G++EE E+ A G+ AE E+
Sbjct: 528 E-EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE-AEAKEE 585
Query: 96 DDVDTKKQK 104
V+ K ++
Sbjct: 586 KKVEEKSEE 594
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 8 TSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEK 67
T+ E+ ++ ++++E +E E D A + EE G ++ EEGE+ E E E
Sbjct: 516 TAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQE--EGETEA 573
Query: 68 EGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDK 107
E +GEE + EE+ + A E+ D K +K +K
Sbjct: 574 EAEGEEAEAKEEKKVEEKSEEVA-TKEELVADAKVEKPEK 612
Score = 39.7 bits (91), Expect = 5e-04
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEE-----------SGEEEEE 65
++++K ++EA + EE E +KE + E EE + E +
Sbjct: 462 VEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVK 521
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
E+EG+ EEE+G EEE E G A D ++ K+ ++K++
Sbjct: 522 EEEGEKEEEEGQEEEEEEDEG--AKSDQAEEGGSEKEGSSEKEE 563
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 15 KDLKEKKEVVKEA------ENGRDAPANGNANEE---NGEQEADKEVDEEGEESGEEEEE 65
K L+++KE K E G D A G+ E+ NGE E +EV++E +E G EE
Sbjct: 766 KPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREE 825
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTK 101
EK G +G + A K+ + E+ V TK
Sbjct: 826 EK---GVVTNG--LDLSPADEKKGGDKSEEKVVVTK 856
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEA--------------DKEVDEEGEESG 60
K+ ++++V K+ E +D P A E+ +KE EEG+
Sbjct: 710 KEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQ 769
Query: 61 EEEEEEK---EGDGEEEDGDE----EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+E+E+EK EG EEE D+ E E E+ + +TK++ + +++
Sbjct: 770 QEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREE 825
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 13 IAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE---EEEEEKEG 69
+ K+ KE+ + +++ + A G + EE ++ A E+ +GE +EE E+E
Sbjct: 757 LEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQET 816
Query: 70 DGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+ +EE+ G + DE D ++K
Sbjct: 817 KEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 851
Score = 30.4 bits (67), Expect = 0.32
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 18 KEKKEVVKE-AENGRDAPANGNANEENGEQEADKEVDEEGEESG-------EEEEEEKEG 69
K K V K E +P + EE G+ K EE +S E + + + G
Sbjct: 638 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVG 697
Query: 70 DGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
GE+++ +E+E + A + E E+ D ++K
Sbjct: 698 KGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKK 732
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 14 AKDLKEKKEVVKEAENGRDAPANGNANEENGEQEA--DKEVDEEGEESGEEEEEEKEGDG 71
A++ +KE E E G A E E EA +K+V+E+ EE +EE +
Sbjct: 548 AEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKV 607
Query: 72 EEEDGDEEEAESATGKRAAED 92
E+ E+A+S K E+
Sbjct: 608 EK----PEKAKSPVPKSPVEE 624
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 18 KEKKEVVKE-AENGRDAPANGNANEENGEQEADKEVDEE---------GEESGEEEEEEK 67
K K V K E +P + + EE + K EE GE+ EEE+E K
Sbjct: 651 KGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK 710
Query: 68 EGDGEEE-DGDEEEAESATGKRAAE 91
E EE+ + EE+ + K+ AE
Sbjct: 711 EAPKEEKVEKKEEKPKDVPEKKKAE 735
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 42 ENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAED 92
E G+ E +E ++E +E+ +EE+ EK+ + ++ ++++AES + A +
Sbjct: 695 EVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 745
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 52.0 bits (123), Expect = 1e-07
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 28/129 (21%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAEN----------GRDAPANGNANEENGEQEADK 50
M +A + E+ +EKKE +E E + +P A E E+E +K
Sbjct: 93 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVK-EEEGEK 151
Query: 51 EVDEEGEESGEEEEE------------EKEGDGEEEDGDEEEAES---ATGKRAAEDDED 95
E +EEG+E EEE+E EKEG E+E+G++EE E+ A G+ AE E+
Sbjct: 152 E-EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE-AEAKEE 209
Query: 96 DDVDTKKQK 104
V+ K ++
Sbjct: 210 KKVEEKSEE 218
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 8 TSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEK 67
T+ E+ ++ ++++E +E E D A + EE G ++ EEGE+ E E E
Sbjct: 140 TAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQE--EGETEA 197
Query: 68 EGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDK 107
E +GEE + EE+ + A E+ D K +K +K
Sbjct: 198 EAEGEEAEAKEEKKVEEKSEEVA-TKEELVADAKVEKPEK 236
Score = 39.7 bits (91), Expect = 5e-04
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 17 LKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEE-----------SGEEEEE 65
++++K ++EA + EE E +KE + E EE + E +
Sbjct: 86 VEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVK 145
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
E+EG+ EEE+G EEE E G A D ++ K+ ++K++
Sbjct: 146 EEEGEKEEEEGQEEEEEEDEG--AKSDQAEEGGSEKEGSSEKEE 187
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 15 KDLKEKKEVVKEA------ENGRDAPANGNANEE---NGEQEADKEVDEEGEESGEEEEE 65
K L+++KE K E G D A G+ E+ NGE E +EV++E +E G EE
Sbjct: 390 KPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREE 449
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTK 101
EK G +G + A K+ + E+ V TK
Sbjct: 450 EK---GVVTNG--LDLSPADEKKGGDKSEEKVVVTK 480
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEA--------------DKEVDEEGEESG 60
K+ ++++V K+ E +D P A E+ +KE EEG+
Sbjct: 334 KEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQ 393
Query: 61 EEEEEEK---EGDGEEEDGDE----EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+E+E+EK EG EEE D+ E E E+ + +TK++ + +++
Sbjct: 394 QEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREE 449
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 13 IAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE---EEEEEKEG 69
+ K+ KE+ + +++ + A G + EE ++ A E+ +GE +EE E+E
Sbjct: 381 LEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQET 440
Query: 70 DGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
+ +EE+ G + DE D ++K
Sbjct: 441 KEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 475
Score = 30.4 bits (67), Expect = 0.32
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 18 KEKKEVVKE-AENGRDAPANGNANEENGEQEADKEVDEEGEESG-------EEEEEEKEG 69
K K V K E +P + EE G+ K EE +S E + + + G
Sbjct: 262 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVG 321
Query: 70 DGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQK 104
GE+++ +E+E + A + E E+ D ++K
Sbjct: 322 KGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKK 356
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 14 AKDLKEKKEVVKEAENGRDAPANGNANEENGEQEA--DKEVDEEGEESGEEEEEEKEGDG 71
A++ +KE E E G A E E EA +K+V+E+ EE +EE +
Sbjct: 172 AEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKV 231
Query: 72 EEEDGDEEEAESATGKRAAED 92
E+ E+A+S K E+
Sbjct: 232 EK----PEKAKSPVPKSPVEE 248
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 18 KEKKEVVKE-AENGRDAPANGNANEENGEQEADKEVDEE---------GEESGEEEEEEK 67
K K V K E +P + + EE + K EE GE+ EEE+E K
Sbjct: 275 KGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK 334
Query: 68 EGDGEEE-DGDEEEAESATGKRAAE 91
E EE+ + EE+ + K+ AE
Sbjct: 335 EAPKEEKVEKKEEKPKDVPEKKKAE 359
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 42 ENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAED 92
E G+ E +E ++E +E+ +EE+ EK+ + ++ ++++AES + A +
Sbjct: 319 EVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 369
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 52.0 bits (123), Expect = 1e-07
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 28 ENGRDAPANGNANEENGEQEADKEVDEEG--EESGEEEEEEKEGDGEEEDGDEEEAESAT 85
+ +AP + ++E+G+++ ++E + E E EEEEEE+E + E+ED DE+EA S
Sbjct: 150 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 209
Query: 86 G------------KRAAEDDEDDDVDTKKQKTDKDD 109
G K +D+EDDD ++ + ++++
Sbjct: 210 GEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEE 245
Score = 49.7 bits (117), Expect = 5e-07
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG-------------- 60
+D ++ E +E E P G EE E+E D++ DE+ +E+G
Sbjct: 161 EDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSY 220
Query: 61 ---EEEEEEKEGDGEEEDGDEEEAESATG------KRAAEDDEDDDVD 99
EE ++E++ D E+G+EEE E G KR AEDD +++ D
Sbjct: 221 LMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 268
Score = 49.3 bits (116), Expect = 7e-07
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 36 NGNANEENGEQEADKEVDEEGEESGEEEE----------EEKEGDGEEEDGDEEEAESAT 85
+G E+N ++++E DE+G+E EEEE EE+E + EEED DE+E E
Sbjct: 146 DGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEA 205
Query: 86 GKRAAEDDEDDDVD--TKKQKTDKDD 109
G E +E+ + K++ D++D
Sbjct: 206 GSELGEGEEEVGLSYLMKEEIQDEED 231
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 52.0 bits (123), Expect = 1e-07
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 28 ENGRDAPANGNANEENGEQEADKEVDEEG--EESGEEEEEEKEGDGEEEDGDEEEAESAT 85
+ +AP + ++E+G+++ ++E + E E EEEEEE+E + E+ED DE+EA S
Sbjct: 109 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 168
Query: 86 G------------KRAAEDDEDDDVDTKKQKTDKDD 109
G K +D+EDDD ++ + ++++
Sbjct: 169 GEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEE 204
Score = 49.7 bits (117), Expect = 5e-07
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG-------------- 60
+D ++ E +E E P G EE E+E D++ DE+ +E+G
Sbjct: 120 EDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSY 179
Query: 61 ---EEEEEEKEGDGEEEDGDEEEAESATG------KRAAEDDEDDDVD 99
EE ++E++ D E+G+EEE E G KR AEDD +++ D
Sbjct: 180 LMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 227
Score = 49.3 bits (116), Expect = 7e-07
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 36 NGNANEENGEQEADKEVDEEGEESGEEEE----------EEKEGDGEEEDGDEEEAESAT 85
+G E+N ++++E DE+G+E EEEE EE+E + EEED DE+E E
Sbjct: 105 DGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEA 164
Query: 86 GKRAAEDDEDDDVD--TKKQKTDKDD 109
G E +E+ + K++ D++D
Sbjct: 165 GSELGEGEEEVGLSYLMKEEIQDEED 190
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 52.0 bits (123), Expect = 1e-07
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 28 ENGRDAPANGNANEENGEQEADKEVDEEG--EESGEEEEEEKEGDGEEEDGDEEEAESAT 85
+ +AP + ++E+G+++ ++E + E E EEEEEE+E + E+ED DE+EA S
Sbjct: 102 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSEL 161
Query: 86 G------------KRAAEDDEDDDVDTKKQKTDKDD 109
G K +D+EDDD ++ + ++++
Sbjct: 162 GEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEE 197
Score = 49.7 bits (117), Expect = 5e-07
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG-------------- 60
+D ++ E +E E P G EE E+E D++ DE+ +E+G
Sbjct: 113 EDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSY 172
Query: 61 ---EEEEEEKEGDGEEEDGDEEEAESATG------KRAAEDDEDDDVD 99
EE ++E++ D E+G+EEE E G KR AEDD +++ D
Sbjct: 173 LMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEEDD 220
Score = 49.3 bits (116), Expect = 7e-07
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 36 NGNANEENGEQEADKEVDEEGEESGEEEE----------EEKEGDGEEEDGDEEEAESAT 85
+G E+N ++++E DE+G+E EEEE EE+E + EEED DE+E E
Sbjct: 98 DGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEA 157
Query: 86 GKRAAEDDEDDDVD--TKKQKTDKDD 109
G E +E+ + K++ D++D
Sbjct: 158 GSELGEGEEEVGLSYLMKEEIQDEED 183
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 51.2 bits (121), Expect = 2e-07
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 27/117 (23%)
Query: 15 KDLKEKKEVVKEAENGR---DAPANGNANEENGEQEADKE---------VDEEGEESGE- 61
K+ EK E KE E+G+ D NG +E GE E ++E +E+G+E G+
Sbjct: 161 KNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDK 220
Query: 62 ---------EEEEEKEGDGEEEDGDEEEA--ESATGKRAAEDDEDDDV---DTKKQK 104
E+E+E+E E+E G+EEEA E K E E+D++ D KK++
Sbjct: 221 KEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 18 KEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGD 77
KE K+ E + D NGN E+ +++ D + E+G+ +GE+ +E+ E + EEED
Sbjct: 146 KEDKDEKGEEDGKEDK--NGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRK 203
Query: 78 E--EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
E + E+ GK + E DV K+ + +++D
Sbjct: 204 ETGDGKENEDGKEKGDKKEGKDVKVKEDEKERED 237
Score = 46.6 bits (109), Expect = 4e-06
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 15 KDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEE 74
+D KEK E KE E+ ++ +G NE+ G+++ DK +EG++ +E+E++ DG+E+
Sbjct: 187 EDGKEKGEDEKEEEDRKET-GDGKENED-GKEKGDK---KEGKDVKVKEDEKEREDGKED 241
Query: 75 DGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
+G EE + E++E + D K+ K +
Sbjct: 242 EGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKE 276
Score = 44.7 bits (104), Expect = 2e-05
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNA----------NEENGEQEADKE 51
++ A + ++I EK+ V + EN DA G NEE ++E +++
Sbjct: 77 NENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEED 136
Query: 52 VDEEGEESGEEEEEE-KEGDGEEEDGDEEEAESATGK---RAAEDDEDDDVDTKKQKTDK 107
+EE E+G+E+++E E DG+E+ E+ E A K + ED + + D K++ D+
Sbjct: 137 QNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDE 196
Query: 108 DD 109
+
Sbjct: 197 KE 198
Score = 44.3 bits (103), Expect = 2e-05
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGE 61
S + T S+++ +++ + V E + + N N +NGE + + E E
Sbjct: 41 SSRKMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIV-- 98
Query: 62 EEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQ-----KTDKDD 109
E +EE D E+ G+++EA +A K ED ++D+ D ++ K DKD+
Sbjct: 99 EVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDE 151
Score = 43.9 bits (102), Expect = 3e-05
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 19 EKKEVV-KEAENGRDAPANGNANEENGEQEADKE-VDEEGEESGEEEE---EEKEGDGEE 73
EKKE V E +N + ++ + EA KE DE+GEE G+E++ E+ E E+
Sbjct: 114 EKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEK 173
Query: 74 EDGDEEEAESATGKRAAEDDEDDDVDTKKQKT 105
EDG + E G+ E ED+ + +++T
Sbjct: 174 EDGKKGEDGKGNGEDGKEKGEDEKEEEDRKET 205
Score = 42.0 bits (97), Expect = 1e-04
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 10/70 (14%)
Query: 16 DLKEKKEV-VKEAENGRDAPANGNANEENGEQEADKEVDE-EGEESGEEEEEEKEGDGEE 73
D KE K+V VKE E R+ +G +E E+EA KE ++ + EE G+EE+E KE
Sbjct: 219 DKKEGKDVKVKEDEKERE---DGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKE----- 270
Query: 74 EDGDEEEAES 83
+DG +EE +S
Sbjct: 271 DDGKKEEPQS 280
Score = 40.0 bits (92), Expect = 4e-04
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
M + +DTS++ +A+ +E VV+E N E ++ EV EE E
Sbjct: 51 MMEENIDTSAQAVAETKQEA--VVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDA 108
Query: 61 EEEEEEK------EGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
E+ EK E EEED E+E + K A ++ D+ + K DK+
Sbjct: 109 TEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKN 162
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 14/66 (21%)
Query: 11 EIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDE-EGEESGEEEEEEKEG 69
++ K+ ++++E KE E G E+EA KE ++ + EE G+EE+E KE
Sbjct: 225 DVKVKEDEKEREDGKEDEGG-------------NEEEAGKEKEDLKEEEEGKEEDEIKED 271
Query: 70 DGEEED 75
DG++E+
Sbjct: 272 DGKKEE 277
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 51.2 bits (121), Expect = 2e-07
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 11 EIIAKDLKEKKEVV-----KEAENGRDAPAN---GNANEENGEQEADKEVDEEGEESGEE 62
E++ + + EK+E +E E+ DA + A++E E+ +V E +E+ EE
Sbjct: 474 EVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEE 533
Query: 63 EEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKK 102
EEEE+E + E+E+ +EEE E + + D+ED+ V +K
Sbjct: 534 EEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEK 573
Score = 47.4 bits (111), Expect = 3e-06
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 25 KEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEA--E 82
+E E + E E+E ++E +EE EES EEEEEE E +G E D ++E+ E
Sbjct: 513 EETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDE 572
Query: 83 SATGKRA-----------AEDDEDDDVDTKKQKTDK 107
+GK +E D DDD +++ DK
Sbjct: 573 KDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDK 608
Score = 45.8 bits (107), Expect = 7e-06
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 DAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQ--EADKEVDEEGEESG 60
DA +D + + + EK E K ++ P EE E+ E+++E +EEGE G
Sbjct: 500 DAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEG 559
Query: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
E +EE E +E+D + + + + +++ + D D D K++ D
Sbjct: 560 SEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYD 607
Score = 35.0 bits (79), Expect = 0.013
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 13 IAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGE 72
+A+ EKKE +E + + A +E E E K+ + +ES + EEE
Sbjct: 228 VAQKKAEKKE--RERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKV 285
Query: 73 EED-----GDEEEAESATGKRAAEDDEDDDV---DTKKQKTDKDD 109
D EE+AE+ T AAEDD + D D KK+K +K++
Sbjct: 286 TVDTGVIPASEEKAETPT---AAEDDNEGDKKKKDKKKKKGEKEE 327
Score = 31.2 bits (69), Expect = 0.19
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 17 LKEKKEVVKEAENGR-DAPANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEED 75
LKE +E+ EA+ + D EN E+E + ++ + G+++ + E ED
Sbjct: 59 LKELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELED 118
Query: 76 GDEEEAESATGKRAAEDDEDDDVDTKK 102
D + ++A K DDD D K
Sbjct: 119 KDSKSKKTAKPKVEMYSGSDDDDDFNK 145
Score = 31.2 bits (69), Expect = 0.19
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 19/112 (16%)
Query: 9 SSEIIAKDLKEKKEVVKEAE-----------NGRDAPANGNANEENGEQEADKEVDEEGE 57
S E+ KD K KK + E N A G A + N + + +E ++ +
Sbjct: 113 SEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSK 172
Query: 58 ESGEEEEEEKEGD-GEEED-------GDEEEAESATGKRAAEDDEDDDVDTK 101
+ E G+ G+E D G ++ ++ G +EDDD K
Sbjct: 173 KIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFK 224
Score = 31.2 bits (69), Expect = 0.19
Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 39 ANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAES-ATGKRAAEDDEDDD 97
A+EE E E D EG++ ++++++K+G+ EE++ ++++ S AT K E
Sbjct: 294 ASEEKAETPTAAEDDNEGDKK-KKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
Query: 98 VDTKKQKTDKDD 109
+ ++QK ++++
Sbjct: 353 EEEERQKREEEE 364
Score = 28.5 bits (62), Expect = 1.2
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 4 AAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESGEEE 63
AA D + K K+KK+ KE + A + ++ K +EE + EEE
Sbjct: 304 AAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEE 363
Query: 64 E-----EEKEGDGEEEDGDEEEAESATGKRAAEDDE 94
E EE E +EE+ E+E ++ E E
Sbjct: 364 ERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKE 399
Score = 28.1 bits (61), Expect = 1.6
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 7 DTSSEIIAKDLKEKKEVVKEAENGRD-APANGNANEENGEQEADKEVDEEGEESGEEEEE 65
D + KD K+KK +E E + P+ QEA ++ EE E EEEE
Sbjct: 308 DNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVK---AMQEALAKLKEEEERQKREEEE 364
Query: 66 EKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDK 107
+ E E +EE KR + ++ + + +K K
Sbjct: 365 RIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGK 406
Score = 27.7 bits (60), Expect = 2.1
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 2 SDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEG----- 56
S VDT I A + K + E +N D ++ ++E +KE +
Sbjct: 283 SKVTVDTGV-IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATV 341
Query: 57 ---EESGEEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTDKD 108
+E+ + +EE+E EE+ + E KR E+ + + +K++ +K+
Sbjct: 342 KAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKE 396
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.286 0.116 0.285
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,036,687
Number of Sequences: 37866
Number of extensions: 330887
Number of successful extensions: 25168
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 2593
Number of HSP's gapped (non-prelim): 10260
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 17 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 45 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.