Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 194272148
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194272148 epsin 1 isoform a [Homo sapiens]
(662 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194272148 epsin 1 isoform a [Homo sapiens] 1363 0.0
gi|41350201 epsin 1 isoform c [Homo sapiens] 1131 0.0
gi|194248095 epsin 1 isoform b [Homo sapiens] 1123 0.0
gi|156671217 epsin 2 isoform a [Homo sapiens] 488 e-138
gi|157388929 epsin 3 [Homo sapiens] 414 e-115
gi|156671215 epsin 2 isoform b [Homo sapiens] 410 e-114
gi|31377575 ENTH domain containing 1 [Homo sapiens] 211 1e-54
gi|156671219 epsin 2 isoform c [Homo sapiens] 189 7e-48
gi|7661968 epsin 4 [Homo sapiens] 169 6e-42
gi|163965366 nascent polypeptide-associated complex alpha subuni... 92 2e-18
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 79 1e-14
gi|110832843 TBP-associated factor 4 [Homo sapiens] 74 3e-13
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 72 1e-12
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 72 2e-12
gi|116284392 mucin 2 precursor [Homo sapiens] 72 2e-12
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 72 2e-12
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 71 3e-12
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 70 6e-12
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 69 1e-11
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 69 1e-11
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 69 1e-11
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 69 2e-11
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 68 3e-11
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 68 3e-11
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 67 4e-11
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 67 4e-11
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 67 4e-11
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 67 4e-11
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 67 4e-11
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 67 5e-11
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 1363 bits (3528), Expect = 0.0
Identities = 662/662 (100%), Positives = 662/662 (100%)
Query: 1 MGDQSWLWNQAAPGVRSPVFACSVEKGNVPLVLSEHLAHSRDPGSGAVRFLISPEPWASA 60
MGDQSWLWNQAAPGVRSPVFACSVEKGNVPLVLSEHLAHSRDPGSGAVRFLISPEPWASA
Sbjct: 1 MGDQSWLWNQAAPGVRSPVFACSVEKGNVPLVLSEHLAHSRDPGSGAVRFLISPEPWASA 60
Query: 61 ILGTSGLLASPVLPAALDAVTCQHLPQPSSGSRPISPRIGALCPLLLQPGTMSTSSLRRQ 120
ILGTSGLLASPVLPAALDAVTCQHLPQPSSGSRPISPRIGALCPLLLQPGTMSTSSLRRQ
Sbjct: 61 ILGTSGLLASPVLPAALDAVTCQHLPQPSSGSRPISPRIGALCPLLLQPGTMSTSSLRRQ 120
Query: 121 MKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK 180
MKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK
Sbjct: 121 MKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK 180
Query: 181 NWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQ 240
NWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQ
Sbjct: 181 NWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQ 240
Query: 241 LVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQ 300
LVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQ
Sbjct: 241 LVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQ 300
Query: 301 LALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTD 360
LALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTD
Sbjct: 301 LALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTD 360
Query: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPW 420
PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPW
Sbjct: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPW 420
Query: 421 GGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAA 480
GGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAA
Sbjct: 421 GGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAA 480
Query: 481 GGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGS 540
GGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGS
Sbjct: 481 GGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGS 540
Query: 541 PPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGP 600
PPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGP
Sbjct: 541 PPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGP 600
Query: 601 SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPF 660
SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPF
Sbjct: 601 SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPF 660
Query: 661 LL 662
LL
Sbjct: 661 LL 662
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 1131 bits (2926), Expect = 0.0
Identities = 550/551 (99%), Positives = 550/551 (99%), Gaps = 1/551 (0%)
Query: 112 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 171
MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI
Sbjct: 1 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 60
Query: 172 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 231
WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG
Sbjct: 61 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 120
Query: 232 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS 291
VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS
Sbjct: 121 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS 180
Query: 292 SGEEELQLQLALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFT 351
SGEEELQLQLALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFT
Sbjct: 181 SGEEELQLQLALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFT 240
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA 411
APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA
Sbjct: 241 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA 300
Query: 412 PAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAK 471
PAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAK
Sbjct: 301 PAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAK 360
Query: 472 PSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 531
PSTNGTT AGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVR
Sbjct: 361 PSTNGTT-AGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 419
Query: 532 GSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFL 591
GSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFL
Sbjct: 420 GSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFL 479
Query: 592 PGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPG 651
PGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPG
Sbjct: 480 PGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPG 539
Query: 652 PPAPNTNPFLL 662
PPAPNTNPFLL
Sbjct: 540 PPAPNTNPFLL 550
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 1124 bits (2906), Expect = 0.0
Identities = 551/576 (95%), Positives = 551/576 (95%), Gaps = 25/576 (4%)
Query: 112 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 171
MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI
Sbjct: 1 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 60
Query: 172 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 231
WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG
Sbjct: 61 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 120
Query: 232 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS 291
VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS
Sbjct: 121 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS 180
Query: 292 SGEEELQLQLALAMSKEEADQ-------------------------EERIRRGDDLRLQM 326
SGEEELQLQLALAMSKEEADQ EERIRRGDDLRLQM
Sbjct: 181 SGEEELQLQLALAMSKEEADQPPSCGPEDDAQLQLALSLSREEHDKEERIRRGDDLRLQM 240
Query: 327 AIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPP 386
AIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPP
Sbjct: 241 AIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPP 300
Query: 387 VPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPV 446
VPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPV
Sbjct: 301 VPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPV 360
Query: 447 SGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS 506
SGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS
Sbjct: 361 SGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS 420
Query: 507 AGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA 566
AGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA
Sbjct: 421 AGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA 480
Query: 567 LVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP 626
LVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP
Sbjct: 481 LVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP 540
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFLL 662
VPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFLL
Sbjct: 541 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFLL 576
>gi|156671217 epsin 2 isoform a [Homo sapiens]
Length = 584
Score = 488 bits (1257), Expect = e-138
Identities = 304/636 (47%), Positives = 366/636 (57%), Gaps = 137/636 (21%)
Query: 112 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 171
M+TSS+RRQMKNIV+NYSEAEIKVREATSNDPWGPSSSLM+EIADLTYNVVAFSEIMSM+
Sbjct: 1 MTTSSIRRQMKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMV 60
Query: 172 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 231
WKRLNDHGKNWRHVYKA+TL++YLIKTGSERV+QQC+EN++A+QTLKDFQY+DRDGKDQG
Sbjct: 61 WKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQG 120
Query: 232 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSA-----AVGSGPP----- 281
+NVREK+KQLVALL+DE+RL+ ERA ALKTKE++AQ AT + GS P
Sbjct: 121 INVREKSKQLVALLKDEERLKAERAQALKTKERMAQVATGMGSNQITFGRGSSQPNLSTS 180
Query: 282 -------------------------PEAEQAWPQSSGEEELQLQLALAMSKEEADQEERI 316
E EQA PQ+SGEEELQLQLALAMS+E A+QEER+
Sbjct: 181 HSEQEYGKAGGSPASYHGSTSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERL 240
Query: 317 RRGDDLRLQMAIEESKRET----GGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV 372
RRGDDLRLQMA+EES+R+T KE SL + P++ P
Sbjct: 241 RRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSGP----------- 289
Query: 373 PTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW-----RPAAPAGPSVDPWG-GTPAP 426
AA ++PWG +PWGGPA ++ DPW +PAA S+DPWG T A
Sbjct: 290 --AAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA----SIDPWGVPTGAT 343
Query: 427 AAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFD-- 484
DPW +S +G ASD W A +T + +G F+
Sbjct: 344 VQSVPKNSDPWAASQQPASSAGKRASDAW-------------GAVSTTKPVSVSGSFELF 390
Query: 485 -----TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVG 539
T D+FS+FD LRT+ T+ S +P+++ G
Sbjct: 391 SNLNGTIKDDFSEFDNLRTSKKTAES--------VTSLPSQNNGTTSPDPFESQPLTVAS 442
Query: 540 SPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATG 599
S P +A RKTPESFLGPNAALV+LDSLV+RP P A++ NPFL G PAT
Sbjct: 443 SKPSSA--------RKTPESFLGPNAALVNLDSLVTRPAPP---AQSLNPFLAPGAPATS 491
Query: 600 PSVTNPFQPAPPATLTLNQLRLSPV--------------------------PPVPGAPPT 633
V NPFQ P LTLNQLR SPV P GA +
Sbjct: 492 APV-NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGS 550
Query: 634 YISPLG-------GGPGLPPMMPPGPPAPNTNPFLL 662
++PLG G G+PP TNPFLL
Sbjct: 551 SLTPLGPAMMNMVGSVGIPP--SAAQATGTTNPFLL 584
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 414 bits (1064), Expect = e-115
Identities = 287/672 (42%), Positives = 354/672 (52%), Gaps = 162/672 (24%)
Query: 112 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 171
M+TS+LRRQ+KNIVHNYSEAEIKVREATSNDPWGP SSLMSEIADLT+N VAF+E+M M+
Sbjct: 1 MTTSALRRQVKNIVHNYSEAEIKVREATSNDPWGPPSSLMSEIADLTFNTVAFTEVMGML 60
Query: 172 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 231
W+RLND GKNWRHVYKA+TL++YL+KTGSERV+ QC+EN+Y +QTLKDFQY+DRDGKDQG
Sbjct: 61 WRRLNDSGKNWRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQG 120
Query: 232 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLA-----------------------QT 268
VNVREK KQ++ALL+DE+RLR+ER HALKTKE++A
Sbjct: 121 VNVREKVKQVMALLKDEERLRQERTHALKTKERMALEGIGIGSGQLGFSRRYGEDYSRSR 180
Query: 269 ATASSAAVGSGPP---PEAEQAWPQSSGEEELQLQLALAMSKEEADQ--EERIRRGDDLR 323
+ SS S P + EQA PQ+SGEEELQLQLALAMS+EEA++ R +DL+
Sbjct: 181 GSPSSYNSSSSSPRYTSDLEQARPQTSGEEELQLQLALAMSREEAEKPVPPASHRDEDLQ 240
Query: 324 LQMAI----------------------------------EESKRETGGKEE------SSL 343
LQ+A+ E +RE +EE SS+
Sbjct: 241 LQLALRLSRQEHEKEVRSWQGDGSPMANGAGAVVHHQRDREPEREERKEEEKLKTSQSSI 300
Query: 344 MDLADVFTAPAPAPTT----DPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAP 399
+DLAD+F P+T DPW P P + WG P+ADPW P P
Sbjct: 301 LDLADIFVPALAPPSTHCSADPWDIP----GFRPNTEASGSSWG-----PSADPW-SPIP 350
Query: 400 TP---ASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWT 456
+ + PW P S +PWG TP AG PT DPW ++ P P T
Sbjct: 351 SGTVLSRSQPW-DLTPMLSSSEPWGRTPVLPAGP-PTTDPWA-------LNSPHHKLPST 401
Query: 457 PAPAFSDPWGGSPAKPST-NGTTAAGGFDTEPDEFSDFDRLRTALPT-SGSSAGELELLA 514
A DPWG S T G + F P+ + L ALP+ SS EL+L
Sbjct: 402 GA----DPWGASLETSDTPGGASTFDPFAKPPESTETKEGLEQALPSGKPSSPVELDLFG 457
Query: 515 GEVPA------RSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNA-AL 567
P+ + P A D+ G L EA+ P A +TPESFLGP+A +L
Sbjct: 458 DPSPSSKQNGTKEPDALDL----GILGEALTQPSKEARAC------RTPESFLGPSASSL 507
Query: 568 VDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRL-SPVPP 626
V+LDSLV P AK NPFL G + PS TNPF P TLNQ+R SP
Sbjct: 508 VNLDSLVK----APQVAKTRNPFLTG---LSAPSPTNPFGAGEPGRPTLNQMRTGSPALG 560
Query: 627 VPGAP--------------PTYISPLGGGPGLP---------------PMMP-------- 649
+ G P P +S + G LP P++P
Sbjct: 561 LAGGPVGAPLGSMTYSASLPLPLSSVPAGLTLPASVSVFPQAGAFAPQPLLPTPSSAGPR 620
Query: 650 PGPPAPNTNPFL 661
P PP TNPFL
Sbjct: 621 PPPPQTGTNPFL 632
>gi|156671215 epsin 2 isoform b [Homo sapiens]
Length = 641
Score = 410 bits (1053), Expect = e-114
Identities = 281/681 (41%), Positives = 350/681 (51%), Gaps = 170/681 (24%)
Query: 112 MSTSSLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMI 171
M+TSS+RRQMKNIV+NYSEAEIKVREATSNDPWGPSSSLM+EIADLTYNVVAFSEIMSM+
Sbjct: 1 MTTSSIRRQMKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMV 60
Query: 172 WKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQG 231
WKRLNDHGKNWRHVYKA+TL++YLIKTGSERV+QQC+EN++A+QTLKDFQY+DRDGKDQG
Sbjct: 61 WKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQG 120
Query: 232 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSA-----AVGSGPP----P 282
+NVREK+KQLVALL+DE+RL+ ERA ALKTKE++AQ AT + GS P
Sbjct: 121 INVREKSKQLVALLKDEERLKAERAQALKTKERMAQVATGMGSNQITFGRGSSQPNLSTS 180
Query: 283 EAEQAWPQSSG-------------------------EEELQ---------LQLALAMSKE 308
+EQ + ++ G EELQ L LA S+
Sbjct: 181 HSEQEYGKAGGSPASYHGSPEASLCPQHRTGAPLGQSEELQPLSQRHPFLPHLGLA-SRP 239
Query: 309 EADQE------ERIRRGDDLRLQMAIEESKRETGGKEESSL------------------- 343
D +R R R+ +E+++ +T G+EE L
Sbjct: 240 NGDWSQPCLTCDRAARATSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERLRR 299
Query: 344 -------MDLADVFTAPAPAPTTDPWGGPAPMAA------AVPTAAPT---SDPWGGPPV 387
M L + P G A+P++ P ++PWG
Sbjct: 300 GDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSGPAAQKAEPWGPSAS 359
Query: 388 PPAADPWGGPAPTPASGDPW-----RPAAPAGPSVDPWG-GTPAPAAGEGPTPDPWGSSD 441
+PWGGPA ++ DPW +PAA S+DPWG T A DPW +S
Sbjct: 360 TNQTNPWGGPAAPASTSDPWPSFGTKPAA----SIDPWGVPTGATVQSVPKNSDPWAASQ 415
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFD-------TEPDEFSDFD 494
+G ASD W A +T + +G F+ T D+FS+FD
Sbjct: 416 QPASSAGKRASDAW-------------GAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFD 462
Query: 495 RLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR 554
LRT+ T+ S +P+++ G S P +A R
Sbjct: 463 NLRTSKKTAES--------VTSLPSQNNGTTSPDPFESQPLTVASSKPSSA--------R 506
Query: 555 KTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL 614
KTPESFLGPNAALV+LDSLV+RP P A++ NPFL G PAT V NPFQ P L
Sbjct: 507 KTPESFLGPNAALVNLDSLVTRPAPP---AQSLNPFLAPGAPATSAPV-NPFQVNQPQPL 562
Query: 615 TLNQLRLSPV--------------------------PPVPGAPPTYISPLG-------GG 641
TLNQLR SPV P GA + ++PLG G
Sbjct: 563 TLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGS 622
Query: 642 PGLPPMMPPGPPAPNTNPFLL 662
G+PP TNPFLL
Sbjct: 623 VGIPP--SAAQATGTTNPFLL 641
>gi|31377575 ENTH domain containing 1 [Homo sapiens]
Length = 607
Score = 211 bits (538), Expect = 1e-54
Identities = 98/163 (60%), Positives = 129/163 (79%)
Query: 116 SLRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRL 175
+ RRQ+KN V NYS+AEIKVREATSNDPWGPSSSLM +I+DLT+N ++ SEIM+M+W RL
Sbjct: 2 AFRRQVKNFVKNYSDAEIKVREATSNDPWGPSSSLMLDISDLTFNTISLSEIMNMLWHRL 61
Query: 176 NDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVR 235
NDHGKNWRHVYK++TLM+YLIK GS++V Q C+E +QTLKDFQ++D GKDQG +R
Sbjct: 62 NDHGKNWRHVYKSLTLMDYLIKNGSKKVIQHCREGFCNLQTLKDFQHIDEAGKDQGYYIR 121
Query: 236 EKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSAAVGS 278
EK+KQ++ LL DE L +ER A +T+++ + + S +GS
Sbjct: 122 EKSKQVITLLMDEPLLCKEREVACRTRQRTSHSILFSKRQLGS 164
>gi|156671219 epsin 2 isoform c [Homo sapiens]
Length = 356
Score = 189 bits (480), Expect = 7e-48
Identities = 147/408 (36%), Positives = 186/408 (45%), Gaps = 102/408 (25%)
Query: 305 MSKEEADQEERIRRGDDLRLQMAIEESKRET----GGKEESSLMDLADVFTAPAPAPTTD 360
MS+E A+QEER+RRGDDLRLQMA+EES+R+T KE SL + P++
Sbjct: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
Query: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW-----RPAAPAGP 415
P AA ++PWG +PWGGPA ++ DPW +PAA
Sbjct: 61 P-------------AAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA---- 103
Query: 416 SVDPWG-GTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPST 474
S+DPWG T A DPW +S +G ASD W A +T
Sbjct: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAW-------------GAVSTT 150
Query: 475 NGTTAAGGFD-------TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDM 527
+ +G F+ T D+FS+FD LRT+ T+ S +P+++ G
Sbjct: 151 KPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAES--------VTSLPSQNNGTTSP 202
Query: 528 SGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKAS 587
S P +A RKTPESFLGPNAALV+LDSLV+RP P A++
Sbjct: 203 DPFESQPLTVASSKPSSA--------RKTPESFLGPNAALVNLDSLVTRPAPP---AQSL 251
Query: 588 NPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV----------------------- 624
NPFL G PAT V NPFQ P LTLNQLR SPV
Sbjct: 252 NPFLAPGAPATSAPV-NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTS 310
Query: 625 ---PPVPGAPPTYISPLG-------GGPGLPPMMPPGPPAPNTNPFLL 662
P GA + ++PLG G G+PP TNPFLL
Sbjct: 311 AAPQPALGATGSSLTPLGPAMMNMVGSVGIPP--SAAQATGTTNPFLL 356
>gi|7661968 epsin 4 [Homo sapiens]
Length = 625
Score = 169 bits (429), Expect = 6e-42
Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
Query: 123 NIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKR-LNDHGKN 181
N+V NYSE E KVREAT++DPWGPS LM EIA T+ F E+M+M+W R L D+ KN
Sbjct: 16 NVVMNYSEIESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKN 75
Query: 182 WRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQL 241
WR VYK++ L+ YLI+ GSERV +E++Y +++L+++ +VD GKDQG+N+R+K K+L
Sbjct: 76 WRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGINIRQKVKEL 135
Query: 242 VALLRDEDRLREERAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEE 296
V +D+DRLREER A K K+K SS +VG E P+S +EE
Sbjct: 136 VEFAQDDDRLREERKKAKKNKDKY---VGVSSDSVGGFRYSERYDPEPKSKWDEE 187
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 92.0 bits (227), Expect = 2e-18
Identities = 107/365 (29%), Positives = 128/365 (35%), Gaps = 70/365 (19%)
Query: 351 TAPA---PAPTTDPWGGPAPMAAAVPTAAPTSDPWGGP---------PVPPAA---DPWG 395
T PA P+P P P P A+ P AA P G P P PAA P G
Sbjct: 1010 TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKG 1069
Query: 396 GPAPTPASGDPWRPAAP-----AGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPS 450
GPA G P PAA GP+ G P P A P+P GG+ + P
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK------GGL-ATPPH 1122
Query: 451 ASDPWTPAPAFSDPWGG--------SPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT 502
P TPA P GG +P P+ + GG T P + + T
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1182
Query: 503 SGSSAGELELLAGEVPARSP----GAFDMSGVRGSLAEAVGSPPPA----ATPTP----T 550
G A A PA +P G +G+ +PP ATP+P T
Sbjct: 1183 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT 1242
Query: 551 PPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAK----------ASNPFL-----PGGG 595
P P GP A + P TPP K A NP + P GG
Sbjct: 1243 TPAATPPSPKGGP--ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG 1300
Query: 596 PATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAP-PTYISPLG--GGPGLPPMMPPGP 652
PAT P P PPA + PP GAP P ++P G P LP P
Sbjct: 1301 PATSPP---KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSK 1357
Query: 653 PAPNT 657
P T
Sbjct: 1358 GGPTT 1362
Score = 92.0 bits (227), Expect = 2e-18
Identities = 112/366 (30%), Positives = 132/366 (36%), Gaps = 75/366 (20%)
Query: 353 PAPAPTT------DPWGGPAPMA---AAVPTAAPTSDPWGGP--------PVPPAADPWG 395
P APTT P GGPA + A P AA P GGP P+PPAA P
Sbjct: 1053 PKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP-- 1110
Query: 396 GPAPTPASGDPWRPAAPAGPSVDP----WGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSA 451
P+P P AP P+ P G P G TP S G + P
Sbjct: 1111 -PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Query: 452 SDPWTPAPAFSDPWG--------GSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTS 503
P TPA P G G+P P+ + GG T + + T
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1229
Query: 504 GSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTP---TPPTRK----T 556
G A A PA +P +G A +PPP PTP TPP+ K T
Sbjct: 1230 GGLATPSPKGAPTTPAATP-----PSPKGGPA----TPPPKGAPTPPAATPPSLKGGLAT 1280
Query: 557 PESFLGPNAALVDLDSLVSRPGPTPP-GA---KASNPFLPGGGPATGPSVTNPFQPA--- 609
P PN A+V S P +PP GA A+ P P G P T P P PA
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP 1340
Query: 610 --PPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP--------GLPPMMPPGP------P 653
P T TL + P G P T S G P G P M PP P P
Sbjct: 1341 PSPKGTPTLP----ATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Query: 654 APNTNP 659
+P +P
Sbjct: 1397 SPKGDP 1402
Score = 90.1 bits (222), Expect = 6e-18
Identities = 105/371 (28%), Positives = 135/371 (36%), Gaps = 85/371 (22%)
Query: 351 TAPAPAPTTDPWGG---PAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPAS---- 403
T PA P + P GG P P A AA P GG PP PA TP S
Sbjct: 1127 TTPAATPPS-PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 404 ----GDPWRPAAPAGPSVDPWGGTPAPAAGEGPT------PDPWGS----SDGGVPVSGP 449
P PA P GG P+ PT P P G S G P + P
Sbjct: 1186 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT-P 1244
Query: 450 SASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGE 509
+A+ P + P G+P P+ + GG T P + + + T G A
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304
Query: 510 LELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTP---TPPTRK--------TPE 558
A PA +P + +GS G+PPP PTP TPP+ K TP
Sbjct: 1305 PPKGAPTPPAATPPS-----PKGS----PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS 1355
Query: 559 SFLGPNAALVDLDSLVSRPGPTPPGAKASN---PFLPGGGPATGPSVTNPF-QPAPPATL 614
S GP S+ GPTPP A S+ P + P GP++ +P P PA +
Sbjct: 1356 SKGGPTTPS-------SKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVI 1408
Query: 615 TLNQLRLSPVPPV---------------PGAPPTYI-------SPLGG--------GPGL 644
L+ + +P PV P P + +P GG P L
Sbjct: 1409 PLSPKK-APATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Query: 645 PPMMPPGPPAP 655
P + PP P P
Sbjct: 1468 PAVTPPSPKEP 1478
Score = 77.8 bits (190), Expect = 3e-14
Identities = 101/334 (30%), Positives = 117/334 (35%), Gaps = 51/334 (15%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPT--AAPTSDPWGGPPVPPAA---DPWGGPA-PTPASGD 405
AP AP A A P P S G P PPAA P GGPA P+P
Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP---- 959
Query: 406 PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDP-WTPAPAFSDP 464
W P PA P GG P+ PTP ++ P GP+ P P P P
Sbjct: 960 KWAPTPPAATPPSPKGGPATPSPKGAPTPP---AATPPSPKGGPATPSPKGAPTPPAVTP 1016
Query: 465 WGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
PS G+ AA F P S P +A L A PA +
Sbjct: 1017 -------PSPKGSPAATPF---PKGASTPPAATPPSPKGSPAATPLPKGAPTTPAAT--- 1063
Query: 525 FDMSGVRGSLA--EAVGSP-PPAATPTPTP---PTRKTPESFLGPNAAL--VDLDSLVSR 576
+ +G A G+P PPAATP P+P P +P+ P AA L +
Sbjct: 1064 --LPSPKGGPATPSLKGAPTPPAATP-PSPKGGPATPSPKGAPMPPAATPPSPKGGLATP 1120
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSP---VPPVPGAPPT 633
P P A+ P P GG AT P P PA L P P P A P
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1180
Query: 634 YISPLG--------GGPGLPPMMPPGPPAPNTNP 659
SP G G P P PP P P
Sbjct: 1181 --SPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212
Score = 77.8 bits (190), Expect = 3e-14
Identities = 93/331 (28%), Positives = 117/331 (35%), Gaps = 61/331 (18%)
Query: 351 TAPAPAPTTDPWGG---PAPMAAAVPTAAPTSDPWGGP--------PVPPAADP---WGG 396
T PA P + P GG P+P A AA P GGP P PPAA P GG
Sbjct: 1219 TTPAATPPS-PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG 1277
Query: 397 PAPTPASGDP-----WRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSA 451
A P G P P+ GP+ P G P P A P+P G P + P
Sbjct: 1278 LATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK-------GSPGTPPPK 1330
Query: 452 SDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS-AGEL 510
P PA P G+P P+T ++ G PT+ SS G
Sbjct: 1331 GAPTPPAVTPPSP-KGTPTLPATTPSSKGG-------------------PTTPSSKEGPT 1370
Query: 511 ELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDL 570
A P S RG + P + P P +K P + + A
Sbjct: 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP-KKAPATPVTREGAATPS 1429
Query: 571 DSLVSRPGPTPPG-AKASNPFLPGGGPATG--------PSVTNPF---QPAPPATLTLNQ 618
++ P TP KA P GGPAT P+VT P PAP T +
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS 1489
Query: 619 LRLSPVPPVPGAPPTYISPLGGGPGLPPMMP 649
+ +P P P PT + + P P P
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPATP 1520
Score = 67.8 bits (164), Expect = 3e-11
Identities = 95/313 (30%), Positives = 106/313 (33%), Gaps = 56/313 (17%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDP-WRPAA 411
P P+ P+ P A P AP P A P P PAS P P
Sbjct: 886 PTPSVVNLPFPKEGP-ATPAPKQAPALSMTSSSPKKARATP--APKGIPASPSPKGAPTP 942
Query: 412 PAGPSVDPWGG--TPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSP 469
PA P GG TP+P P S GG P + P PA P GG P
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA-PTPPAATPPSPKGG-P 1000
Query: 470 AKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSG 529
A PS G T P P +A A PA +P
Sbjct: 1001 ATPSPKGAPTPPAV-TPPS------------PKGSPAATPFPKGASTPPAATP-----PS 1042
Query: 530 VRGSLAEAVGSPPPAATP----TPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAK 585
+GS PAATP PT P P GP + + PTPP
Sbjct: 1043 PKGS---------PAATPLPKGAPTTPAATLPSPKGGPATPSL-------KGAPTPP--- 1083
Query: 586 ASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYI----SPLGGG 641
A+ P P GGPAT PS P PPA + PP GAP T SP GG
Sbjct: 1084 AATPPSPKGGPAT-PSPKG--APMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGL 1140
Query: 642 PGLPPMMPPGPPA 654
PP P PA
Sbjct: 1141 ATPPPKGAPTTPA 1153
Score = 52.8 bits (125), Expect = 1e-06
Identities = 104/379 (27%), Positives = 131/379 (34%), Gaps = 92/379 (24%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAA-DPWGGPAP-----TPASG 404
++P AP T PAPM A A S P P P + DP A TPA+
Sbjct: 1488 SSPKKAPAT-----PAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATL 1542
Query: 405 DPWRPAAPAGPSVDPWGGTPA-PAAGEGPT----------PDPWGSSDGGVP-------- 445
P P +V TPA P E P P S+ G P
Sbjct: 1543 APKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIP 1602
Query: 446 --VSGPSASDPWTPAPAFSDPWGGS-PAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT 502
V+ PS + TP PA + P PA P+ GT + P D PT
Sbjct: 1603 PAVTSPSPKEAPTP-PAVTPPSPEKGPATPAPKGTPTSP--PVTPSSLKDS-------PT 1652
Query: 503 SGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPES--- 559
S +S + VP S G G +L E + +P P +TP T PTRK P++
Sbjct: 1653 SPASV--TCKMGATVPQASKGLPAKKGPT-ALKEVLVAPAPESTPIITAPTRKGPQTKKS 1709
Query: 560 ----------------FLGPNAALVDL----------------DSLVSRPGP-TPPGAKA 586
GP + + D+ S GP PP +KA
Sbjct: 1710 SATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKA 1769
Query: 587 SNPFLPGGGPATGP---SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPG 643
S P P S + P+PP +L L SPVP +P P P PG
Sbjct: 1770 STPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP---SPVPTLP--PKQQFLP--SSPG 1822
Query: 644 LPPMMPPGPPAPNTNPFLL 662
L P P AP LL
Sbjct: 1823 LVLESPSKPLAPADEDELL 1841
Score = 50.4 bits (119), Expect = 5e-06
Identities = 90/340 (26%), Positives = 113/340 (33%), Gaps = 46/340 (13%)
Query: 339 EESSLMDLADVFTAPAPAPTT-DPWGGPAPMAAAV-PTAAPTSDPWGGPPVPPAADPWGG 396
+E +L L V TA P P AP+A V P S P P +PPA P G
Sbjct: 691 KEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVP--SPSLPPAGTPPGT 748
Query: 397 PAPTPASGDPWRPAAPAGPSVDPW--GGTPAPAAGEGP------TPDPWG---SSDGGVP 445
S + P P G A A+ +G +P P G S P
Sbjct: 749 KKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRP 808
Query: 446 VSGPSASDPWTPAPAFSDPWGGSPAKPS---TNGTTAAGGFDTEPDEFSDFDRLRTALPT 502
+ ++ P TP S P SP + S N + G D+ S PT
Sbjct: 809 PTKKGSAGPDTPIGNLSSPV--SPVEASFLPENSLSFQGSKDSPATTHS---------PT 857
Query: 503 SGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRK-TPESFL 561
S G A +P A +G +P P+ P P TP
Sbjct: 858 PPSPKG----------APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQ 907
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRL 621
P ++ +R P P G AS P G P T P+ T P PAT +
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPS--PKGAP-TPPAATPPSPKGGPATPSPKWAPT 964
Query: 622 SP--VPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
P PP P P SP G P P PP P P
Sbjct: 965 PPAATPPSPKGGPATPSP-KGAPTPPAATPPSPKGGPATP 1003
Score = 40.8 bits (94), Expect = 0.004
Identities = 70/302 (23%), Positives = 106/302 (35%), Gaps = 22/302 (7%)
Query: 370 AAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAG 429
AA PT PP+ ++ P PT + P AP PS P +
Sbjct: 450 AAAPTTTFEVATCVSPPM--SSGPISNIEPTSPAALVMAPVAPKEPSTQVATTLRIPVSP 507
Query: 430 EGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGG------F 483
P P+ + V V P+ D T PA + G+P P+ G T
Sbjct: 508 PLPDPEDLKNLPSSVLVKFPTQKDLQT-VPASLE---GAPFSPAQAGLTTKKDPTVLPLV 563
Query: 484 DTEPDEFSDFDRLRTA--LPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSP 541
P F ++ +P S + + L +P P + S + + + +V
Sbjct: 564 QAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSPLGVNSSASVIKT 623
Query: 542 PPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPS 601
A P P K+ S + P A L+S G P AK ++ + P +
Sbjct: 624 DSYAGPDSAGPLLKS--SLITPTVAAFPLES-ADPAGVAPTTAKGTSTYTTTASPFLEGT 680
Query: 602 VTNPFQPAPPATLTLNQLRLSPVP----PVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
V+ + P TL L L P PV +P +PL L P +P P+P+
Sbjct: 681 VSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPL-ATLVLAPEIPKSVPSPSL 739
Query: 658 NP 659
P
Sbjct: 740 PP 741
Score = 35.4 bits (80), Expect = 0.17
Identities = 78/330 (23%), Positives = 115/330 (34%), Gaps = 38/330 (11%)
Query: 352 APAPAPTT---DPWGGPAPMAA---AVPTA----APTSDP-WGGPPVPPAADPWGGP--A 398
+P P+P+T P P P ++ A+P APT P GPP+ PAA P A
Sbjct: 65 SPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIA 124
Query: 399 P----TPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSA-SD 453
P TP+S P A A SV P P P S + +S P A S+
Sbjct: 125 PTLKGTPSSSAPLALVALAPHSVQKSSAFP-PNLLTSPPSVAVAESGSVITLSAPIAPSE 183
Query: 454 PWT-----PAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-----S 503
P T P+ +P G+P+ P T S L PT +
Sbjct: 184 PKTNLNKVPSEVVPNP-KGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIA 242
Query: 504 GSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGP 563
+ + + + ++PG+ + G V P + T + P + + GP
Sbjct: 243 SPQVKDTTISSVLISPQNPGSLSLKG-------PVSPPAALSLSTQSLPVVTSSQKTAGP 295
Query: 564 NAALVDLDSLVSRPGPTPPGAKASNPFLPGGGP-ATGPSVTNPFQPAPPATLTLNQLRLS 622
N SL S P + S L GP A +T + S
Sbjct: 296 NTPPDFPISLGSHLAPLHQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQRS 355
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPMMPPGP 652
+PP+P + + P + P + GP
Sbjct: 356 VIPPLPSRNEVVPATVAAFPVVAPSVDKGP 385
Score = 33.9 bits (76), Expect = 0.49
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 533 SLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLP 592
S+ A+G P P P +P ++ P S + ++ S P P +S LP
Sbjct: 33 SVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALP 92
Query: 593 GG----GPATGPSVTNPFQPAPPATLTLNQLRLSPV---PPVPGAPPTYIS----PLGGG 641
G P P++ P P PA L L ++P P AP ++ +
Sbjct: 93 LGTAPEAPTFLPNLIGP--PISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKS 150
Query: 642 PGLPPMMPPGPPA 654
PP + PP+
Sbjct: 151 SAFPPNLLTSPPS 163
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 79.0 bits (193), Expect = 1e-14
Identities = 91/327 (27%), Positives = 121/327 (37%), Gaps = 43/327 (13%)
Query: 353 PAPAPTTDPWG-GPA-PMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDP--WR 408
PA P+ DP+G PA P+ PTA PT P+ P PA P G + P +G P +
Sbjct: 2168 PAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFH 2227
Query: 409 PAAPAGP-----SVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSD 463
P P + DP+ P+ P+ G V G AS+P P F +
Sbjct: 2228 TTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPG-------VGGGKASEPLLSPPPFGE 2280
Query: 464 PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEV--PARS 521
K G ++ P D P+SG+ G LEL +V +
Sbjct: 2281 SRKALEVKKEELGASSP---SYGPPNLGFVDS-----PSSGTHLGGLELKTPDVFKAPLT 2332
Query: 522 PGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRK---TPESFLGPNAALVDLDSLVSRPG 578
P A + L PPPA P+PP+ P S+ P A L RP
Sbjct: 2333 PRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQ----PPLTPRPQ 2388
Query: 579 PTPPGAKASNP--FLPGGG----PATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPP 632
P PP + + P LP PA+ S ++ P P L+ SPV P +P
Sbjct: 2389 PPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPD 2448
Query: 633 TY----ISPLGGGPGLPPMMPPGPPAP 655
Y P P P PP P P
Sbjct: 2449 PYSRPPSRPQSRDPFAPLHKPPRPQPP 2475
Score = 59.7 bits (143), Expect = 8e-09
Identities = 84/322 (26%), Positives = 114/322 (35%), Gaps = 69/322 (21%)
Query: 354 APAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPA 413
+P P P P P ++P S P PP P P+PA P P A
Sbjct: 495 SPPPEESPLSPP-------PESSPFSPLEESPLSPPEESP-----PSPALETPLSPPPEA 542
Query: 414 GPSVDPWGGTP-APAAGEGPTPDPWGSS-----DGGVPVSGPSASDPWTPAPAFS---DP 464
P P+ +P +P E PT P +S P+S P P +P P S P
Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPP 602
Query: 465 WGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+ SP P + + P E S R + P S P SP +
Sbjct: 603 FEESPLSPPPEESPL-----SPPPEAS-----RLSPPPEDSP-------MSPPPEESPMS 645
Query: 525 FDMSGVRGSLAEAVG--SPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
R S V SPPP +P +PP ++P S P P
Sbjct: 646 PPPEVSRLSPLPVVSRLSPPPEESPL-SPPPEESPTS-------------------PPPE 685
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
++ S P P P + P +P P P +L L SP+ P+P P + P GP
Sbjct: 686 ASRLSPP--PEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEP--QLCPRSEGP 741
Query: 643 GLPPM-----MPPGPPAPNTNP 659
L P + P P P+ +P
Sbjct: 742 HLSPRPEEPHLSPRPEEPHLSP 763
Score = 50.8 bits (120), Expect = 4e-06
Identities = 78/300 (26%), Positives = 103/300 (34%), Gaps = 42/300 (14%)
Query: 373 PTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW------RPAAPAGPSVDPWGGTPAP 426
P PT +P V P GG + +P +P AG ++P AP
Sbjct: 377 PGDTPTDEP-DALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQ--LEAP 433
Query: 427 AAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPA---FSDPWGGSPAKPSTNGTTAAGGF 483
E P P S P+S P P +P P S P PA P +
Sbjct: 434 LNEEMPLLPPPEES----PLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPL 489
Query: 484 DTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPP 543
+ P + + P S LE P SP + E SPPP
Sbjct: 490 EESPLSPPP-EESPLSPPPESSPFSPLEESPLSPPEESPPS--------PALETPLSPPP 540
Query: 544 AATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVT 603
A+P +PP ++P S P L P PP A +P P P + P
Sbjct: 541 EASPL-SPPFEESPLS--PPPEEL---------PTSPPPEASRLSP-PPEESPMSPPPEE 587
Query: 604 NPFQPAPPATLTLNQLRLSPVPPVPG----APPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
+P P P A+ SP+ P P +PP S L P PM PP +P + P
Sbjct: 588 SPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPP 647
Score = 50.4 bits (119), Expect = 5e-06
Identities = 57/155 (36%), Positives = 64/155 (41%), Gaps = 51/155 (32%)
Query: 537 AVGSPPPAATPT-----PTPPT--RKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNP 589
A+GSPPPAA PT PT P + + FL P A V PGP PG
Sbjct: 2112 ALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSV--------PGPDSPGELFLK- 2162
Query: 590 FLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPT---YISPLGGGPGLPP 646
LP PA PS +PF AP L P P APPT Y SP G P PP
Sbjct: 2163 -LPPQVPAQVPS-QDPFGLAPAYPLE---------PRFPTAPPTYPPYPSPT-GAPAQPP 2210
Query: 647 MM-----------------PPGPP--APNT-NPFL 661
M+ PPG P P+T +PFL
Sbjct: 2211 MLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFL 2245
Score = 44.3 bits (103), Expect = 4e-04
Identities = 70/247 (28%), Positives = 89/247 (36%), Gaps = 30/247 (12%)
Query: 426 PAAGEGPT--PDPWGSSDGGVPVSGPSAS-DPWTPAPAFSD--PWG--GSPAKPSTNGTT 478
P G+ PT PD + G P G S P P P + P G G +P
Sbjct: 375 PEPGDTPTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPL 434
Query: 479 AAGGFDTEPDEFSDFDRLRTALPTSGS-SAGELELLAGEVPARS-PGAFDMSGVRGSLAE 536
P E S PTS A L E+PA P A +S L E
Sbjct: 435 NEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSR---PLEE 491
Query: 537 AVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPG--G 594
+ SPPP +P +PP +P S L +S +S P +PP P P
Sbjct: 492 SPLSPPPEESPL-SPPPESSPFSPLE--------ESPLSPPEESPPSPALETPLSPPPEA 542
Query: 595 GPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPG-APPTYISPLGGGPGLPPMMPPGPP 653
P + P +P P P +L SP P +PP SP+ P PM PP
Sbjct: 543 SPLSPPFEESPLSPPP------EELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Query: 654 APNTNPF 660
+ PF
Sbjct: 597 SRLFPPF 603
Score = 44.3 bits (103), Expect = 4e-04
Identities = 75/277 (27%), Positives = 100/277 (36%), Gaps = 51/277 (18%)
Query: 363 GGPAPMAAAVPTAAPTSDPWGGPPVPPAA--DPWG-----GPAPT----------PASGD 405
G P+PM P A +P PPVP P G GP PT A+G+
Sbjct: 2529 GTPSPMRFTFPQAV--GEPSLKPPVPQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGN 2586
Query: 406 PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDP---WTPAPAFS 462
+P GPS G + + P+ P + DG +P AS +P
Sbjct: 2587 FHPSGSPLGPSSGSTGESYGLSPLRPPSVLPPPAPDGSLPYLSHGASQRSGITSPVEKRE 2646
Query: 463 DPWGGSPAK------PSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGE 516
DP G + P T +G TE ++ RLR ELL +
Sbjct: 2647 DPGTGMGSSLATAELPGTQDPGMSGLSQTELEKQRQRQRLR-------------ELLIRQ 2693
Query: 517 VPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSR 576
R+ + + A AVG PP + P+ P + P A D SLV
Sbjct: 2694 QIQRNTLRQEKE-TAAAAAGAVG-PPGSWGAEPSSPAFEQLSRGQTPFAGTQDKSSLVGL 2751
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPAT 613
P +K S P L GP + PS +P PPAT
Sbjct: 2752 -----PPSKLSGPIL---GPGSFPSDDRLSRPPPPAT 2780
Score = 41.2 bits (95), Expect = 0.003
Identities = 88/336 (26%), Positives = 116/336 (34%), Gaps = 46/336 (13%)
Query: 353 PAPAPTTDPW-GGPA------PMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGD 405
P P+ P G PA P + +P P S P G P + P P P P P
Sbjct: 885 PPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLS-PSGEPSLSPQLMP---PDPLPPPLS 940
Query: 406 PWRPAAPAGPSVDPWGGTPAP--AAGEGPTPDPWGSSDGGVPVSGP---SASDPWTPAPA 460
P AA A P++ P G P A G+ P + P+S P + +DP P
Sbjct: 941 PIITAA-APPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPM 999
Query: 461 FSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
P GSP P A EP L+ +L S + A +
Sbjct: 1000 ILPPSPGSPVGP-------ASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVP 1052
Query: 521 SP--------GAFDMSGVRGSLAEAVGSPP-PAATPTPTPPTRKTPESFLG-----PNAA 566
SP G D + + E V P PA P+ T P +P L P A
Sbjct: 1053 SPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPL-PSPMGDLSCPAPSPAPA 1111
Query: 567 LVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP 626
L D L P G A PG P G + + + + L+ L+PV P
Sbjct: 1112 LDDFSGLGEDTAPLD-GIDA-----PGSQPEPGQTPGSLASELKGSPVLLDPEELAPVTP 1165
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFLL 662
+ P + G P P P AP T P L+
Sbjct: 1166 MEVYPECKQTAGQGSPCEEQEEPRAPVAP-TPPTLI 1200
Score = 38.9 bits (89), Expect = 0.015
Identities = 83/346 (23%), Positives = 113/346 (32%), Gaps = 49/346 (14%)
Query: 354 APAPTTDPWGGP--APMAAAVPTAAPTSDPWGGPPV-PPAADPWGGPAPTPASGDPWRPA 410
+P P P P A + P +P S P P+ PP P P + P
Sbjct: 609 SPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEE 668
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDP---WTPAPAFSDPWGG 467
+P P + +P P A +P P S P P++ P P P
Sbjct: 669 SPLSPPPEESPTSPPPEASR-LSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLP 727
Query: 468 SPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELEL----------LAGEV 517
P +P + P+E R P A E L E
Sbjct: 728 LPEEPQLCPRSEGPHLSPRPEE--PHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEE 785
Query: 518 PARSPGAFD--MSGVRGSLAEAVGSPPPAATPTPTPP-----------TRKTPESFLGPN 564
P SP A +S L + + P +P P P + ++ E L P
Sbjct: 786 PHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPR 845
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV 624
L + +P +P K P PG PA P PP +L+ L P
Sbjct: 846 PEESHLSPELEKPPLSPRPEKP--PEEPGQCPAPEELPLFP----PPGEPSLSPLLGEPA 899
Query: 625 PPVPGAPPTYISPL--------GGGPGLPP-MMPPGPPAPNTNPFL 661
PG PP +SPL G P L P +MPP P P +P +
Sbjct: 900 LSEPGEPP--LSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPII 943
Score = 37.7 bits (86), Expect = 0.034
Identities = 67/277 (24%), Positives = 88/277 (31%), Gaps = 63/277 (22%)
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS 447
P + +P P P + P P P + P G+ P P+ P
Sbjct: 835 PQSEEPCLSPRPEESHLSPELEKPPLSPRPEK----PPEEPGQCPAPEELPL----FPPP 886
Query: 448 GPSASDPWTPAPAFSDPWGGSPAKP-------STNGTTAAGGFDTEPDEFSD--FDRLRT 498
G + P PA S+P G P P S +G + PD +
Sbjct: 887 GEPSLSPLLGEPALSEP-GEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITA 945
Query: 499 ALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPE 558
A P + S GELE G P S + + E SPPP A T
Sbjct: 946 AAPPALSPLGELEYPFGAKGDSDPE----SPLAAPILETPISPPPEANCTD--------- 992
Query: 559 SFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQ 618
P P PP +P G GP+ +P PP L Q
Sbjct: 993 ------------------PEPVPPMILPPSP-----GSPVGPASPILMEPLPPQCSPLLQ 1029
Query: 619 LRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAP 655
L P +PP+ SP P L P+ P P +P
Sbjct: 1030 HSLVP----QNSPPSQCSP----PAL-PLSVPSPLSP 1057
Score = 36.6 bits (83), Expect = 0.076
Identities = 46/189 (24%), Positives = 70/189 (37%), Gaps = 37/189 (19%)
Query: 279 GPPPEAEQAWP-----QSSGEEELQLQLALA-------MSKEEADQEERIRRGDDLRLQM 326
GP ++ Q P + G+ QLQ LA +S ++ Q + + L+
Sbjct: 4176 GPVLQSGQGLPGVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQ 4235
Query: 327 AIEESKR-ETGGKEESSLMDLADV------FTAPAPAPTTDPWGGPAPMAAA---VPTAA 376
A+ ++ + G + S L L F P P + GP P P A
Sbjct: 4236 AVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGA 4295
Query: 377 PTSDPWGGP--PVPPAADPW-----------GGPAPTPASGDPWRPAAPA--GPSVDPWG 421
++ P GP P PP + P PT A P P P GP+++P
Sbjct: 4296 LSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPP 4355
Query: 422 GTPAPAAGE 430
G +PAA +
Sbjct: 4356 GRVSPAAAQ 4364
Score = 36.6 bits (83), Expect = 0.076
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 535 AEAVGSPPPAATP-TPTPPTRKT----PE--SFLGPNAALVDLDSLVSRPG-----PTPP 582
++AV PP P T T P + P+ F GP + RP P PP
Sbjct: 4234 SQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPP 4293
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYI-SPLGGG 641
GA ++ P L P PS +P +P P+ L S +P PPT+ +P G
Sbjct: 4294 GALSTGPVLGPVHPTPPPS--SPQEPKRPSQLPSPS---SQLPTEAQLPPTHPGTPKPQG 4348
Query: 642 PGLPPMMPPGPPAP 655
P L P PPG +P
Sbjct: 4349 PTLEP--PPGRVSP 4360
Score = 33.9 bits (76), Expect = 0.49
Identities = 51/210 (24%), Positives = 71/210 (33%), Gaps = 17/210 (8%)
Query: 346 LADVFTAPAPAPTTD------PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAP 399
L+ + TA AP + P+G P AAP + P PP P P
Sbjct: 939 LSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPILET---PISPPPEANCTDPEP 995
Query: 400 TPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP 459
P P P +P GP+ P P P P P S PS P PA
Sbjct: 996 VPPMILPPSPGSPVGPA-SPILMEPLP-----PQCSPLLQHSLVPQNSPPSQCSP--PAL 1047
Query: 460 AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPA 519
S P SP + A + E ++ S+ + + + L+ P+
Sbjct: 1048 PLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPSPMGDLSCPAPS 1107
Query: 520 RSPGAFDMSGVRGSLAEAVGSPPPAATPTP 549
+P D SG+ A G P + P P
Sbjct: 1108 PAPALDDFSGLGEDTAPLDGIDAPGSQPEP 1137
Score = 31.6 bits (70), Expect = 2.4
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 568 VDLDSLVSRPGPTP-PGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP 626
+D+ SL+ + P P P + S + S P +P+PP SP+ P
Sbjct: 4873 LDILSLLKQESPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPP---------SPLAP 4923
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGP-PAP 655
P +PPT PL P P PP P P P
Sbjct: 4924 SPASPPT--EPLVELPTEPLAEPPVPSPLP 4951
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 348 DVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW 407
DV AP P +P P+P+A + P + PT P P A P P P +S +
Sbjct: 4902 DVRQLSAPPPE-EPSPPPSPLAPS-PASPPTEPLVELPTEPLAEPPVPSPLPLASSPESA 4959
Query: 408 RPAAPAGP 415
RP A P
Sbjct: 4960 RPKPRARP 4967
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 74.3 bits (181), Expect = 3e-13
Identities = 104/345 (30%), Positives = 120/345 (34%), Gaps = 63/345 (18%)
Query: 363 GGPAPMAAAVPTAAPTSDPWGGPPVPPA--ADPWGGPAPTPASGDPWRPAAPAGPS---- 416
G PA A A P A P P PPA A P GG P P RP PAGP+
Sbjct: 65 GSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA 124
Query: 417 ---VDPWGG----TPAPAA---GEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWG 466
P G P PAA GP P P G + P + + + P P P G
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP-GPGPGPGPGPG 183
Query: 467 GSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP-TSGSSAGELELLAGEVPARSPGAF 525
P KP+ G T + + A P S + G LL PA +PG
Sbjct: 184 PGPGKPA-----GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPA-APGTV 237
Query: 526 DMS----GVRGSLAEAVGSPP-------PAATPTPTPPT-------------RKTPESFL 561
+ G A A SPP PAA P P PP T +
Sbjct: 238 IQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV 297
Query: 562 GPNAALVDLDSLVSRPGPTP-PGAKASNPFLPGGG-----PATGPSVTNP---FQPAPPA 612
P AA + S + P P P G A PG G PA G +P Q APPA
Sbjct: 298 PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA 357
Query: 613 TLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
T L+ P A I P G LP PPAP T
Sbjct: 358 AQT-----LAASGPASTAASMVIGPTMQG-ALPSPAAVPPPAPGT 396
Score = 58.9 bits (141), Expect = 1e-08
Identities = 86/327 (26%), Positives = 111/327 (33%), Gaps = 58/327 (17%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGP-PVPPAADPWGGPAPTPASG-----DP 406
PAPA P GPA +AA A P P GP P P P G A +G +
Sbjct: 152 PAPAGPAKP-AGPAALAAR---AGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNS 207
Query: 407 WRPAAPA------GPS----------------VDPWGGTPAPAAGEGPTPDPWGSSDGGV 444
AAPA GP+ P+ G AP A P+P
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPA-----APA 262
Query: 445 PVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSG 504
P + +A P PAPA G PA P T P + A P
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA------VPPPAAAQNGGSAGAAPAPA 316
Query: 505 SSAGELELLAGEVPARSPGAFDMSGVRGSLAEAV--GSPPPAATPTPTPPTRKTPESFLG 562
+AG ++G+ + A GV+ + V +PP A T + P +G
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIG 376
Query: 563 PNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPAT-----LTLN 617
P + + P PP A + LP G +VT P AT TL
Sbjct: 377 PT-----MQGALPSPAAVPPPAPGTPTGLPKGAAG---AVTQSLSRTPTATTSGIRATLT 428
Query: 618 QLRLSPVPPVPGAPPTYISPLGGGPGL 644
L+P P P PT I PG+
Sbjct: 429 PTVLAPRLPQPPQNPTNIQNFQLPPGM 455
Score = 57.8 bits (138), Expect = 3e-08
Identities = 93/344 (27%), Positives = 121/344 (35%), Gaps = 61/344 (17%)
Query: 352 APAPAPTTDPWGG----PAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW 407
AP T P+ G PAP A + P A + P PP PP PAP + P
Sbjct: 233 APGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPP-------PAPATLARPPG 285
Query: 408 RPAAP--AGPSVDPWGGTPAPA-----AGEGPTPDPWGSSDGGV---PVSGPSASDPWTP 457
PA P A P+V P PA A AG P P P GV P G +A+ P P
Sbjct: 286 HPAGPPTAAPAVPP----PAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP-AP 340
Query: 458 APAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT--------SGSSAGE 509
P A P T AA G + ++ ALP+ G+ G
Sbjct: 341 GVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGL 400
Query: 510 LELLAGEVP---ARSPGAFDMSGVRGSLAEAVGS---PPPAATPT-----PTPPTRKTPE 558
+ AG V +R+P A SG+R +L V + P P PT PP
Sbjct: 401 PKGAAGAVTQSLSRTPTA-TTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVR 459
Query: 559 SFLG-----PNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPAT 613
S G P AL + ++ P A P P P S AP
Sbjct: 460 SENGQLLMIPQQALAQMQ---AQAHAQPQTTMAPRPATPTSAPPVQISTVQ----APGTP 512
Query: 614 LTLNQLRLSPVPPVPGAPPTYISP---LGGGPGLPPMMPPGPPA 654
+ Q+ + + T + P L PG+ P + G A
Sbjct: 513 IIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQPQLVLGGAA 556
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 72.4 bits (176), Expect = 1e-12
Identities = 90/325 (27%), Positives = 122/325 (37%), Gaps = 45/325 (13%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGP------PVPPAADPWGGPAPTPASGD 405
A A AP P G + AA PT WGGP +P A P GP P P G
Sbjct: 50 ASASAPQRGPSG---ILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPG- 105
Query: 406 PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPW 465
PA GP G P P G P P + P+ GP + P P F P
Sbjct: 106 ---PAQIPGPLP---GSIPGPIPGPAQIPSPIPA-----PIPGPISGPVQIPGP-FRGPI 153
Query: 466 GGSPAKPSTNGTTAAGGFD-TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
G + P+ +G F P + P SG G + + +P PG
Sbjct: 154 PGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISV---PIPGPIPGP 210
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPT--PPTRKTPESFLGPNAALV--DLDSLVSRPGPT 580
+ G ++ P P P P P P GPN L+ + +S PGP
Sbjct: 211 -----ISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPI 265
Query: 581 PPGAKASNPFLPGGGPATGPS-VTNPFQPAPPATLTLNQLRLSPVPPVPGAPP---TYIS 636
G S +PG G GP + +P + P +L L+P+ PG+ P + +
Sbjct: 266 -IGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLP----GLAPILG-PGSGPGSGSVPA 319
Query: 637 PLGGGPGLPPMMPPGPPAPNTNPFL 661
P+ G LP P P +P+ + FL
Sbjct: 320 PIPGPGSLPAPAPLWPQSPDASDFL 344
Score = 55.1 bits (131), Expect = 2e-07
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 350 FTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRP 409
F+ P P P P GP P + P P S P GP P + P GP P P G P
Sbjct: 171 FSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGP--IP 228
Query: 410 AAPAGPSVDPWGGT---PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP 459
+GP+ P G P P GP P P G P+ GP S P P
Sbjct: 229 GPISGPNPGPIPGPISGPNPGLIPGPIPGP---ISGPGPIIGPIPSPAQIPGP 278
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 72.0 bits (175), Expect = 2e-12
Identities = 91/312 (29%), Positives = 118/312 (37%), Gaps = 51/312 (16%)
Query: 365 PAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPT--PASGDPWRPAAPAGP------S 416
P+P A P+A + +A P PA + A G P PA P+ P +
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
Query: 417 VDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTP-APAFSDPWGGSPAKPSTN 475
+ P TP P P P SS P++ PS S P +P AP PA P +
Sbjct: 271 LRPPQVTP-PRKDAAPALGPLSSS----PLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Query: 476 GTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLA 535
TT+ G + LP+ L LA P P +L
Sbjct: 326 ATTSLGS--------PTLQATHSFLPSP-----PLSPLATPPPQAPPAL--------ALP 364
Query: 536 EAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGG 595
P P A+P +P +P++ PNA V L P P+PP PF P
Sbjct: 365 PLQAPPSPPASPPLSPLATPSPQA---PNALAVHLLQAPFSPPPSPP---VQAPFSPPAS 418
Query: 596 PATGPSVTNPFQPAPPATLTLNQLRLSPVPPV-PGAPPTYISPLGGGPGL--PPMM---- 648
P PS T P Q APP +L L++ P PP P P+ P P L PP+
Sbjct: 419 PPVSPSATPPSQ-APP-SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476
Query: 649 -PPGPPAPNTNP 659
P PPA T P
Sbjct: 477 PPQAPPALATPP 488
Score = 64.7 bits (156), Expect = 3e-10
Identities = 89/318 (27%), Positives = 116/318 (36%), Gaps = 40/318 (12%)
Query: 352 APAPAP-TTDPWGGPAPMAAAVPTAAPTSDPWGGPP-VPPAADPWGGPAPTPASGDPWRP 409
APA P ++ P P+P A P+A P+ PP PP+ +PT + + P
Sbjct: 284 APALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 343
Query: 410 AAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTP----APAFSDPW 465
+ P P P P PA P P S P+S + P P P+
Sbjct: 344 SPPLSPLATPPPQAP-PALALPPLQAP-PSPPASPPLSPLATPSPQAPNALAVHLLQAPF 401
Query: 466 GGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAF 525
P+ P + P +A P S + L +VP P +
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSP----------SATPPS-QAPPSLAAPPLQVPPSPPASP 450
Query: 526 DMSGVRGSLAEAVGSPPPAATP---TPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
MS S +PPP A P PP + P P AL + S PG P
Sbjct: 451 PMS---PSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA--SFPGQAPF 505
Query: 583 GAKASNPFLP--GGGPATGPSVTNPF---QPAPPATLTLNQLRLSPVPPVPGAPPTYISP 637
AS P P P P + P P+PPA+ TL R PP PG P T +S
Sbjct: 506 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR---PPTPG-PDTSVS- 560
Query: 638 LGGGPGLPPMMPPGPPAP 655
GP L + PGPP P
Sbjct: 561 ---GPRLTLALAPGPPPP 575
Score = 63.5 bits (153), Expect = 6e-10
Identities = 92/320 (28%), Positives = 113/320 (35%), Gaps = 47/320 (14%)
Query: 365 PAPMAAAVPTAAPTSDPWGGPPVPPAADPWGG--------PAPTPASGDPWRPAAPAGPS 416
PA A + T P P PPV PAA G P A G + P
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 417 VDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPS-ASDPWTPAPAFSDPWGGSPAKPSTN 475
P + PA+G G P ++ G PVS P AS P P G + S
Sbjct: 77 AGPTRTSRPPASGRGERAPPAKNTSPG-PVSSPGRASGTTRPGPL-----GQKGLRISAE 130
Query: 476 GTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR-SPGAFDMSGVRGSL 534
T A G P R+AL SAG +G P SP S G+
Sbjct: 131 ETVARGKATEAPK--------RSAL-----SAGARRDTSGPTPGTPSPAMARRSRAAGT- 176
Query: 535 AEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT-------PPGAKAS 587
VG P PA + P PPT +S + S +R P+ P S
Sbjct: 177 --EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 234
Query: 588 NPFLPGGGPA-TGPSVTN----PFQPAPPATLTLNQLRLSPV-PPVPGAPPTYISPLGGG 641
+ P PA +GPS P P+ P L LR V PP A P + PL
Sbjct: 235 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA-LGPLSSS 293
Query: 642 PGLPPMMPPGPPAPNTNPFL 661
P P P PP+P+ P L
Sbjct: 294 PLATP-SPSAPPSPSAPPSL 312
Score = 57.4 bits (137), Expect = 4e-08
Identities = 77/314 (24%), Positives = 103/314 (32%), Gaps = 47/314 (14%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA- 410
+P +P P P+P A P+ PP PP P+ PA P S P+
Sbjct: 371 SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 430
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGP----SASDPWTPAPAFSDPWG 466
AP + P P+P A +P P++ P + P P + P
Sbjct: 431 APPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQ 490
Query: 467 GSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA-- 524
P+ P+ + G P L T P + L P SP
Sbjct: 491 ALPSPPA----SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 546
Query: 525 ----------FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLV 574
+SG R +LA A G PP PP+R + GP DL
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGPPP--------PPSRSPSSTLSGP-----DLAGHS 593
Query: 575 SRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPV-----PG 629
S TP + + P GG A P PA + P PP+ PG
Sbjct: 594 SSATSTPEELRGYDSG-PEGGAAASPPPDAELAACHPAAWS-----RGPAPPLAFRGAPG 647
Query: 630 APPTYISPLGGGPG 643
AP + P GPG
Sbjct: 648 APLPW--PPATGPG 659
Score = 39.7 bits (91), Expect = 0.009
Identities = 40/141 (28%), Positives = 50/141 (35%), Gaps = 19/141 (13%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAAD--PWGGPAPTPASGDPWRP 409
A AP P P P+ + A +S P D P GG A +P
Sbjct: 567 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 626
Query: 410 AAPAGPSVDPWGGTPAPAA---GEGPTPDPW------GSSDGGVPVSGPSASDPWTPAPA 460
PA W PAP G P PW GS+DG + + TPAP
Sbjct: 627 CHPAA-----WSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG 681
Query: 461 FSDPWGGSPAKPSTNGTTAAG 481
DP P+ ++ G AAG
Sbjct: 682 ALDP---GPSPGTSGGKAAAG 699
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 71.6 bits (174), Expect = 2e-12
Identities = 81/329 (24%), Positives = 114/329 (34%), Gaps = 71/329 (21%)
Query: 351 TAPAPAPTTD----PWGGPAPMAAAVPTAAPTSDPWGGPPV------PPAADPWGGPAPT 400
T P+P PT+ P P+P T PT+ P PP+ PP P P T
Sbjct: 1404 TTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTP--SPPITTTTTPPPTTTP-SPPIST 1460
Query: 401 PASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPA 460
+ P +P + P TP+P TP P + S P+ + PA
Sbjct: 1461 TTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTP------SPPTTTPITPPAST 1514
Query: 461 FSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
+ P +P+ P+T TT P + PTS ++ P
Sbjct: 1515 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-----PTSTTTLP---------PTT 1560
Query: 521 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT 580
+P SPPP T TP P T +P + P+ + + P+
Sbjct: 1561 TP-----------------SPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPS 1603
Query: 581 PPGA------KASNPFLPGGGPATGPSVTNPF----QPAPPATLTLNQLRLSPVPPVPGA 630
PP + P P P T P+ T P+PP T T +P P +
Sbjct: 1604 PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTT-----TTPPPTTTPS 1658
Query: 631 PPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
PPT +P PP+ P P T P
Sbjct: 1659 PPTTTTP------SPPITTTTTPPPTTTP 1681
Score = 65.1 bits (157), Expect = 2e-10
Identities = 75/321 (23%), Positives = 108/321 (33%), Gaps = 56/321 (17%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T P+P PTT P PA PT P+ PP P P+P + P P
Sbjct: 1498 TTPSP-PTTTPITPPASTTTLPPTTTPS------PPTTTTTTPPPTTTPSPPTTTPITP- 1549
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP----AFSDPWG 466
P + P TP+P TP P + PS TP+P + P
Sbjct: 1550 -PTSTTTLPPTTTPSPPPTTTTTPPP---------TTTPSPPTTTTPSPPTITTTTPPPT 1599
Query: 467 GSPAKPSTNGTTAAGGFDTEPDEFSDFD--RLRTALPTSGSSAGELELLAGEVPARSPGA 524
+P+ P+T TT P + T LP + + + P +P
Sbjct: 1600 TTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP-- 1657
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDS----LVSRPGPT 580
SPP TP+P T TP P++ + S ++ P PT
Sbjct: 1658 ---------------SPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPT 1702
Query: 581 P-PGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLG 639
P + + P P T P+P T + ++ +PP + P +PL
Sbjct: 1703 TTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPL- 1761
Query: 640 GGPGLPPMMPPGPPAPNTNPF 660
PP P +PF
Sbjct: 1762 ---------PPSITPPTFSPF 1773
Score = 45.1 bits (105), Expect = 2e-04
Identities = 75/338 (22%), Positives = 103/338 (30%), Gaps = 37/338 (10%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3925 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3984
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3985 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 4041
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 4042 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 4101
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPAATP-------TPTPPTRKTPESFLGPNAALV 568
+ P +P + G+ P TP TPTP TP P +
Sbjct: 4102 QTPTTTP--ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP----TPTGTQTPTTTPI 4155
Query: 569 DLDSLVSRPGPTPPGAKA--SNPFLPGGG--PATGPSVTNPFQPAPPATLTLNQLRLSPV 624
+ V+ P PTP G + + P P P+ T P +T + +L S
Sbjct: 4156 TTTTTVT-PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNP 4214
Query: 625 PPVPGAPPT---YISPLGGGPGLPPMMPPGPPAPNTNP 659
PP P T SPL L +PP +T P
Sbjct: 4215 PPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAP 4252
Score = 43.9 bits (102), Expect = 5e-04
Identities = 73/342 (21%), Positives = 103/342 (30%), Gaps = 42/342 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWR 408
+ T P+P TT P ++ T T P PP P TP+
Sbjct: 1685 ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTM 1744
Query: 409 PAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPA--PAFSDPWG 466
P + P TP P + PT P+ ++ P W + P F P G
Sbjct: 1745 TTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTPCVPLCNWTGWLDSGKPNFHKPGG 1804
Query: 467 GSPAKPSTNGTTAAGGFDTEPDEFSD--FDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+ G A + D +L + S + L+ + G
Sbjct: 1805 DTELIGDVCGPGWAANISCRATMYPDVPIGQLGQTVVCDVS----VGLICKNEDQKPGGV 1860
Query: 525 FDMS-----GVRGSLAEAVGSPPPAATPT---PTPPT------------RKTPESFLGPN 564
M+ + E V P T T PTPPT TP P
Sbjct: 1861 IPMAFCLNYEINVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPT 1920
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQ 618
+ + V+ P PTP G + P P T + P P P T T
Sbjct: 1921 TTPITTTTTVT-PTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTT 1973
Query: 619 LRLSPVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
++P P G +P+ + P P G P T P
Sbjct: 1974 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2015
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/284 (20%), Positives = 78/284 (27%), Gaps = 11/284 (3%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 4017 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 4076
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 4077 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 4133
Query: 462 SDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARS 521
+ P+ T T T PT+ + P +
Sbjct: 4134 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 4193
Query: 522 PGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTP 581
+AE S PP + TP +R T L L + P
Sbjct: 4194 QTGPPTHTSTAPIAELTTSNPPPESSTPQT-SRSTSSPLTESTTLLSTLPPAIEMTSTAP 4252
Query: 582 PGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVP 625
P + GG + P T P P T +P P
Sbjct: 4253 PSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTP 4296
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 1924 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 1983
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 1984 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2040
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2041 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2100
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2101 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2160
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2161 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2207
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2208 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2245
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2039 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2098
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2099 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2155
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2156 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2215
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2216 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2275
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2276 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2322
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2323 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2360
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2154 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2213
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2214 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2270
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2271 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2330
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2331 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2390
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2391 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2437
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2438 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2475
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2269 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2328
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2329 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2385
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2386 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2445
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2446 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2505
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2506 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2552
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2553 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2590
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2384 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2443
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2444 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2500
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2501 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2560
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2561 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2620
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2621 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2667
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2668 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2705
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2499 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2558
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2559 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2615
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2616 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2675
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2676 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2735
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2736 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2782
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2783 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2820
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2614 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2673
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2674 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2730
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2731 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2790
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2791 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2850
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2851 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 2897
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 2898 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2935
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2729 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2788
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2789 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2845
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2846 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 2905
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 2906 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 2965
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 2966 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3012
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3013 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3050
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2844 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 2903
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 2904 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2960
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 2961 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3020
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3021 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3080
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3081 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3127
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3128 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3165
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 2959 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3018
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3019 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3075
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3076 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3135
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3136 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3195
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3196 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3242
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3243 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3280
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3074 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3133
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3134 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3190
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3191 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3250
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3251 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3310
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3311 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3357
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3358 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3395
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3189 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3248
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3249 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3305
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3306 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3365
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3366 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3425
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3426 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3472
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3473 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3510
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3304 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3363
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3364 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3420
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3421 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3480
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3481 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3540
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3541 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3587
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3588 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3625
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3419 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3478
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3479 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3535
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3536 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3595
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3596 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3655
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3656 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3702
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3703 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3740
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3534 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3593
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3594 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3650
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3651 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3710
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3711 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3770
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3771 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3817
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3818 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3855
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3649 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3708
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3709 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3765
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3766 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3825
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3826 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 3885
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 3886 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 3932
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 3933 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 3970
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/338 (21%), Positives = 97/338 (28%), Gaps = 43/338 (12%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3764 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3823
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3824 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3880
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3881 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 3940
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 3941 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 4000
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 4001 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 4047
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
P P G +P+ + P P G P T P
Sbjct: 4048 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 4085
Score = 39.3 bits (90), Expect = 0.012
Identities = 70/337 (20%), Positives = 96/337 (28%), Gaps = 44/337 (13%)
Query: 349 VFTAPAPAPTTDPWGGPAPMAAAVPTAA---PTSDPWGGPP---VPPAADPWGGPAPTPA 402
+ T PT P G P + T PT P G P P PTP
Sbjct: 3879 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 3938
Query: 403 SGD-PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P +V P TP P + PT P ++ P P+ + T P
Sbjct: 3939 GTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 3995
Query: 462 SD------PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
+ P P+T T P T + T+ +
Sbjct: 3996 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 4055
Query: 516 EVPARSPGAFDMSGVRGSLAEAVGSPPPA-------ATPTPTPPTRKTPESFLGPNAALV 568
+ P +P + +P TPTPTP +TP + V
Sbjct: 4056 QTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 4115
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQLRLS 622
P PTP G + P P T + P P P T T ++
Sbjct: 4116 -------TPTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTTTVT 4162
Query: 623 PVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
P P G +P+ + P P P T P
Sbjct: 4163 PTPTPTGTQTPTTTPITTTTTVTP--TPTPTGTQTGP 4197
Score = 38.5 bits (88), Expect = 0.020
Identities = 78/349 (22%), Positives = 111/349 (31%), Gaps = 51/349 (14%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPAS--GDPWR 408
T P+P TT P PT P+S P P P TP+S
Sbjct: 1655 TTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTT 1714
Query: 409 PAAPAGPSVDPWG-GTPAPAAGEGPTPDPWGSSDGGVP---VSGPSASDPWTPA---PAF 461
P++ PS P TP+P TP P ++ +P S P + P P+ P F
Sbjct: 1715 PSSTTTPSPPPTTMTTPSPTT----TPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTF 1770
Query: 462 SDPWGGSPAKPSTNGTTAAGGFDTEPDEF----SDFDRLRTAL-PTSGSSAGELELLAGE 516
S +P P G D+ F D + + P ++ + +
Sbjct: 1771 SPFSTTTPTTPCVPLCNWTGWLDSGKPNFHKPGGDTELIGDVCGPGWAANISCRATMYPD 1830
Query: 517 VPARSPGAFDMSGVR-GSLAEAVGSPPPAATP------------------TPTPPTRKTP 557
VP G + V G + + P P PT T T
Sbjct: 1831 VPIGQLGQTVVCDVSVGLICKNEDQKPGGVIPMAFCLNYEINVQCCECVTQPTTMTTTTT 1890
Query: 558 ESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT-- 615
E+ P + + V+ P PTP G + P P T + P P P T T
Sbjct: 1891 ENPTPPTTTPITTTTTVT-PTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPT 1943
Query: 616 ----LNQLRLSPVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
++P P G +P+ + P P G P T P
Sbjct: 1944 TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 1992
Score = 36.2 bits (82), Expect = 0.099
Identities = 59/281 (20%), Positives = 84/281 (29%), Gaps = 40/281 (14%)
Query: 399 PTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPA 458
PTP + P P TP P + PT P ++ P P+ + T
Sbjct: 1893 PTPPTTTPITTTTTVTP-------TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1945
Query: 459 PAFS------DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELEL 512
P + P P+T T P T + T+ +
Sbjct: 1946 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP 2005
Query: 513 LAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATP-------TPTPPTRKTPESFLGPNA 565
+ P +P + G+ P TP TPTP TP P
Sbjct: 2006 TGTQTPTTTP--ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP----TPTGTQTPTT 2059
Query: 566 ALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLT------LNQL 619
+ + V+ P PTP G + P P T + P P P T T
Sbjct: 2060 TPITTTTTVT-PTPTPTGTQT-----PTTTPITTTTTVTP-TPTPTGTQTPTTTPITTTT 2112
Query: 620 RLSPVPPVPGAPPTYISPLGGGPGLPPM-MPPGPPAPNTNP 659
++P P G +P+ + P P G P T P
Sbjct: 2113 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 2153
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 71.6 bits (174), Expect = 2e-12
Identities = 88/355 (24%), Positives = 117/355 (32%), Gaps = 65/355 (18%)
Query: 350 FTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPP---AADPWGGPAPTPASGDP 406
F +P T P+ A+ P + P P P PP + P P +P + P
Sbjct: 429 FLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHP 488
Query: 407 WR---------PAAP---------------AGPSVD-PWGGTPAPAAGEGPTPDPWGSSD 441
+ P AP A PS+ P P P+ P
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT 548
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP 501
P++ P P PAP P P+ +T T P + + P
Sbjct: 549 ASAPLTTPHLETPPCPAPC---PLQAPPSPLTTPPPETPSSIATPPPQAPP---ALASPP 602
Query: 502 TSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFL 561
G + L LA P P +L P P A+P +P +P++
Sbjct: 603 LQGLPSPPLSPLATPPPQAPPXL--------ALPPLQAPPSPPASPPLSPLATPSPQA-- 652
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQ-------------P 608
PNA V L P P+PP PF P P PS T P Q P
Sbjct: 653 -PNALAVHLLQAPFSPPPSPP---VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP 708
Query: 609 APPATLTLNQLRLSP--VPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFL 661
+PPA+ ++ P PP APP + P P PPM P P P P L
Sbjct: 709 SPPASPPMSPSATPPPQAPPPLAAPPLQVPP--SPPASPPMSPSATPPPRVPPLL 761
Score = 65.1 bits (157), Expect = 2e-10
Identities = 88/329 (26%), Positives = 108/329 (32%), Gaps = 82/329 (24%)
Query: 342 SLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTP 401
+L LA A AP T P P A P AP S P P P TP
Sbjct: 537 NLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPS---------PLTTP---PPETP 584
Query: 402 ASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
+S P AP + P G P+P TP P +P P A
Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALP-----------PLQAP 633
Query: 462 SDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARS 521
P P P L T P + ++ L A P S
Sbjct: 634 PSPPASPPLSP-----------------------LATPSPQAPNALAVHLLQAPFSPPPS 670
Query: 522 PGAFDMSGVRGSLAEAVGSPP--PAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGP 579
P +A SPP P +P+ TPP++ P SL + P
Sbjct: 671 PP-----------VQAPFSPPASPPVSPSATPPSQAPP--------------SLAAPPLQ 705
Query: 580 TPPGAKASNPFLPGGGP---ATGPSVTNPFQ--PAPPATLTLNQLRLSP--VPPVPGAPP 632
PP AS P P P A P P Q P+PPA+ ++ P VPP+ APP
Sbjct: 706 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP 765
Query: 633 TYISPLGGGPGLPPMMPPGPPAPNTNPFL 661
+ P P PM P P P P L
Sbjct: 766 LQVPP--SPPASLPMSPLAKPPPQAPPAL 792
Score = 65.1 bits (157), Expect = 2e-10
Identities = 80/311 (25%), Positives = 101/311 (32%), Gaps = 69/311 (22%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA- 410
+P +P P P+P A P+ PP PP P+ PA P S P+
Sbjct: 635 SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 694
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPA 470
AP + P P+P A +P P++ P P P+P S P S
Sbjct: 695 APPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVP--PSPPASPPMSPSAT 752
Query: 471 KPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGV 530
P L A P +VP P + MS
Sbjct: 753 PPPR------------------VPPLLAAPPL-------------QVPPSPPASLPMS-- 779
Query: 531 RGSLAEAVGSPPPAATPT-PTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNP 589
+ PPP A P TPP + P P A+ PG P AS P
Sbjct: 780 ------PLAKPPPQAPPALATPPLQALPS----PPASF---------PGQAPFSPSASLP 820
Query: 590 FLPGGGPA--TGPSVTNPF---QPAPPATLTLNQLRLSPVPPVPGAPPTYISP-----LG 639
P P P + P P+PPA+ TL R PP PG + P L
Sbjct: 821 MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR---PPTPGPDTSVSGPRLTLALA 877
Query: 640 GGPGLPPMMPP 650
GP PP P
Sbjct: 878 PGPPPPPSRSP 888
Score = 60.8 bits (146), Expect = 4e-09
Identities = 82/324 (25%), Positives = 110/324 (33%), Gaps = 41/324 (12%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGP--APTPASGDPWRPA 410
PA P + P P P+A P+A P+ P PPA P P TP P P+
Sbjct: 328 PATLPPSPPLATPLPLAPPSPSAPPSLQTL---PSPPATPPSQAPPSMTTPPMQAP--PS 382
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDP---WTPAPAFSDPWGG 467
P + +P+ P+P S + P+ T +P +
Sbjct: 383 LQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLT 442
Query: 468 SPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDM 527
SP++P++ T PD L+ L S + L P SP
Sbjct: 443 SPSRPAS----------TPPDS----PPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHP 488
Query: 528 SGVRGSLAEAVGSPPPAATPTPTPPTRKT--PESFLGPNAALVDLDSLVSRPGPTPPGAK 585
SLA P ++ P T+ + P S P A+L L + P PP
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLT-TPPLENLPSLAPP--- 544
Query: 586 ASNPFLPGGGPATGPSVTNPFQPAP--------PATLTLNQLRLSPVPPVPGAPPTYISP 637
P P T P + P PAP P T + S P P APP SP
Sbjct: 545 ---PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASP 601
Query: 638 LGGGPGLPPMMPPGPPAPNTNPFL 661
G PP+ P P P P L
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXL 625
Score = 60.1 bits (144), Expect = 6e-09
Identities = 95/347 (27%), Positives = 125/347 (36%), Gaps = 44/347 (12%)
Query: 351 TAPAPAP---TTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGG--PAPTPASGD 405
T A AP T P G P P P A G P A+ GG A P S
Sbjct: 16 TPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP 75
Query: 406 PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPS-ASDPWTPAPAFSDP 464
P AG S P PA+G G P ++ G PVS P AS P P
Sbjct: 76 RAGPTRSAGTSSRNPASRP-PASGRGERAPPAKNTSPG-PVSSPGRASGTTRPGPL---- 129
Query: 465 WGGSPAKPSTNGTTAAGGFDTEPDE--FSDFDRLRTALPTSGSSAGEL---ELLAGE--- 516
G + S T A G P S R T+ PT G+ + + AG
Sbjct: 130 -GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 517 VPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLG----PNAALVDLDS 572
+P +P A G ++V S +T P+P R+ P + G + +L +
Sbjct: 189 LPRPAPSARPRPPTEGP-RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 247
Query: 573 LVSRPGPTPPGAKA--------SNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLS-- 622
+S P + P A+ S P G P VT P + A PA L+ L+
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 623 --------PVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNTNPFL 661
PVPP A + L P L +P PP+P+ P L
Sbjct: 308 SPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSL 354
Score = 56.2 bits (134), Expect = 9e-08
Identities = 77/309 (24%), Positives = 110/309 (35%), Gaps = 40/309 (12%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWR--P 409
+P +P+ P P AA P P S P PP+ P+A P AP P + P + P
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPP-ASPPMSPSATP-PPQAPPPLAAPPLQVPP 739
Query: 410 AAPAGPSVDPWGGTPA---PAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWG 466
+ PA P + P P P P P S +P+S + P P + P
Sbjct: 740 SPPASPPMSPSATPPPRVPPLLAAPPLQVP-PSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 467 GSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA-- 524
P+ P++ G P L T P + L P SP
Sbjct: 799 ALPSPPAS----FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 854
Query: 525 ----------FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLV 574
+SG R +LA A G PPP P+ +P + + G +++ +
Sbjct: 855 PRRPPTPGPDTSVSGPRLTLALAPGPPPP---PSRSPSSTLSGPDLAGHSSSATSTPEEL 911
Query: 575 SRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTY 634
P G A++P A P+ + PAPP R +P P+P P T
Sbjct: 912 RGYDSGPEGGAAASPPPDAELAACHPAAWSR-GPAPPLA-----FRGAPGAPLPWPPAT- 964
Query: 635 ISPLGGGPG 643
GPG
Sbjct: 965 ------GPG 967
Score = 41.2 bits (95), Expect = 0.003
Identities = 80/300 (26%), Positives = 103/300 (34%), Gaps = 49/300 (16%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAP 412
P+P P + P P +A++P + + P PPV A P+P PAS P P
Sbjct: 801 PSP-PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP-PASPTLQAPRRP 858
Query: 413 AGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKP 472
P D P P P P S +SGP D G S +
Sbjct: 859 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP-------------DLAGHSSSAT 905
Query: 473 STNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAG---ELELLAGEVPARSPGAFDMSG 529
ST P+E +D + P G++A + EL A A S G
Sbjct: 906 ST------------PEELRGYD----SGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA 949
Query: 530 VRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNP 589
RG A P P AT + T GP +A +L P P G KA+
Sbjct: 950 FRG--APGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAA-- 1005
Query: 590 FLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPP------VPGAPPTYISPLGGGPG 643
G G S +P Q A L L L+ S V + A GGGPG
Sbjct: 1006 ----AGAGAGASSRSPKQ-ARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPG 1060
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 71.2 bits (173), Expect = 3e-12
Identities = 85/360 (23%), Positives = 122/360 (33%), Gaps = 57/360 (15%)
Query: 351 TAPAPAPTTDPWGGPA------PMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASG 404
++P P P + P P P+++++P + PT+ P P P P P ASG
Sbjct: 1412 SSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLP--APASAPLTIPISAPLTVSASG 1469
Query: 405 D--------PWRPAAPAG---PSVDPWGGTPAPAA---GEGPTPDPWGSSDGGVPV---- 446
P P PA PS+ P G +P+ +A G P S G P+
Sbjct: 1470 PALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAP 1529
Query: 447 -----------SGPSASDPWTPAPAFSDPWGGSPAKPSTNGT---TAAGGFDTEPDEFSD 492
P+ S PA A + P+ +P + A+ +
Sbjct: 1530 TSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAP 1589
Query: 493 FDRLRTA------------LPTSGSSAGELELLAGE---VPARSPGAFDMSGVRGSLAEA 537
+TA LP S G +LA VP +P + G + A
Sbjct: 1590 MAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSS--TPGTSLASASP 1647
Query: 538 VGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPA 597
V +P P P+ T P P+ A +L PT G+ S G G
Sbjct: 1648 VPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNP 1707
Query: 598 TGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
GP T P ++L + + P P PT L P L P P GP +T
Sbjct: 1708 QGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHT 1767
Score = 64.3 bits (155), Expect = 3e-10
Identities = 86/343 (25%), Positives = 121/343 (35%), Gaps = 51/343 (14%)
Query: 346 LADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGD 405
L V P P P P P+ +P + S GPP+ PA+ P P P
Sbjct: 1019 LGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRP-----PGPVLLP 1073
Query: 406 PWRPAAPAGPSVDP-----WGGT---PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTP 457
P +P + + P V P GT P P PTP P S P T
Sbjct: 1074 PLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTV 1133
Query: 458 APAFSDPWGGSPAKPSTNGTTAAGGFDT-------EPDEFSDFDRLRTALPTSG-SSAGE 509
P ++ P PA +T TT A T P ++ LP+ S G+
Sbjct: 1134 PPGYTFP----PAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQ 1189
Query: 510 LELLAGEVPARSPGA----FDMSGVRGSLAE------AVGSPPPAATPTPTPPTRKTPES 559
L LA A + G+ F + G + +L AVG P P +
Sbjct: 1190 LASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHH 1249
Query: 560 FLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAP----PATLT 615
+ A + + ++ PGPTP LP P+T P+ T P P T+
Sbjct: 1250 LISQPAHVALIQAVAPTPGPTPVSV------LPSSTPSTTPAPTGLSLPLAANQVPPTMV 1303
Query: 616 LNQ------LRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGP 652
N +R +P + PP +P GLP ++ P P
Sbjct: 1304 NNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRP 1346
Score = 52.0 bits (123), Expect = 2e-06
Identities = 83/306 (27%), Positives = 108/306 (35%), Gaps = 59/306 (19%)
Query: 364 GPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGT 423
G AP+ + P P+S P GP P P P +P S P + + P P T
Sbjct: 1391 GAAPLTISSPLHVPSSLP--GPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVP---T 1445
Query: 424 PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTP-----APAFSDPWGGSPAKPSTNGTT 478
PA P P S+ V SGP+ TP PA P +P+ S + +
Sbjct: 1446 TLPAPASAPLTIPI-SAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASA 1504
Query: 479 AAGGFDTEPDEFSDFDRLRTAL--PTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAE 536
G T P S L PTS G +A PA SP A
Sbjct: 1505 LTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVA---PACSPVLVP--------AS 1553
Query: 537 AVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGP 596
A+ SP P+A P P P S L P ++ + P P P
Sbjct: 1554 ALASPFPSA-PNPAP----AQASLLAPASSA---------------SQALATPLAPMAAP 1593
Query: 597 ATGPSVTNPFQPAPPATLTLNQLRLSPVP---PVPGAPPTYISPLGGGPGLPPMMPPGPP 653
T ++ P PAPP L+P+P P PGA P S P + P PG
Sbjct: 1594 QT--AILAP-SPAPP---------LAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTS 1641
Query: 654 APNTNP 659
+ +P
Sbjct: 1642 LASASP 1647
Score = 51.6 bits (122), Expect = 2e-06
Identities = 96/350 (27%), Positives = 120/350 (34%), Gaps = 77/350 (22%)
Query: 335 TGGKEESSLMDLADVFTAPAPAPTTDPWGGP---APMAAAVPTAAPTSDPWGGPPVPPA- 390
+G +S + L + TAP+ + + P G P AP ++ VP T P P + PA
Sbjct: 1496 SGASPSASALTLG-LATAPSLSSSQTP-GHPLLLAPTSSHVPGLNSTVAPACSPVLVPAS 1553
Query: 391 --ADPW-GGPAPTPASGDPWRPAA--------PAGPSVDPWGGTPAPAAGEGPTPDP-WG 438
A P+ P P PA PA+ P P P AP+ P P
Sbjct: 1554 ALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLA 1613
Query: 439 SSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTE-PDEFSDFDRLR 497
S G PV S TP P A ST GT+ A P +
Sbjct: 1614 PSPGAAPVLASSQ----TPVPVM--------APSSTPGTSLASASPVPAPTPVLAPSSTQ 1661
Query: 498 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAAT----------P 547
T LP S P SP + + +LA +G P+ T P
Sbjct: 1662 TMLPAPVPS-----------PLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGP 1710
Query: 548 TPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQ 607
PT TP S L P A +L PGP P G + P P P+ +P
Sbjct: 1711 FPTQTLSLTPASSLVPTPA----QTLSLAPGP-PLGPTQTLSLAPA--PPLAPA--SPVG 1761
Query: 608 PAPPATLTL---------------NQLRLSPVPPVPGAPPTYISPLGGGP 642
PAP TLTL L LSP PVP P L P
Sbjct: 1762 PAPAHTLTLAPASSSASLLAPASVQTLTLSPA-PVPTLGPAAAQTLALAP 1810
Score = 47.8 bits (112), Expect = 3e-05
Identities = 71/273 (26%), Positives = 99/273 (36%), Gaps = 42/273 (15%)
Query: 346 LADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADP-WGGPAPTP--- 401
LA PAP P P + A VP+ P+ + PA P GG +P+
Sbjct: 1642 LASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLS 1701
Query: 402 -ASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP- 459
+G+P P S+ PA+ PTP S G P+ GP+ + PAP
Sbjct: 1702 LGTGNPQGPFPTQTLSL-------TPASSLVPTPAQTLSLAPGPPL-GPTQTLSLAPAPP 1753
Query: 460 -AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVP 518
A + P G +PA T ++ P +PT G +A + LA
Sbjct: 1754 LAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALA-PAS 1812
Query: 519 ARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPG 578
+SP S A ++ A P P + P S P D+L R G
Sbjct: 1813 TQSP---------ASQASSLVVSASGAAPLPVTMVSRLPVSKDEP-------DTLTLRSG 1856
Query: 579 PTPPGAKASNPFLPGGGPATGPSVTNPFQPAPP 611
P P + A++ GGP QP PP
Sbjct: 1857 PPSPPSTATS----FGGPRPRR------QPPPP 1879
Score = 47.0 bits (110), Expect = 6e-05
Identities = 71/258 (27%), Positives = 100/258 (38%), Gaps = 36/258 (13%)
Query: 397 PAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGV--------PVSG 448
P PTP S P++ + P G + AA + P P ++ GV P G
Sbjct: 1267 PGPTPVSV---LPSSTPSTTPAPTGLSLPLAANQVP---PTMVNNTGVVKIVVRQAPRDG 1320
Query: 449 PSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAG 508
+ P PAP P G PA + T G T R +PT
Sbjct: 1321 LTPVPPLAPAPR--PPSSGLPAVLNPRPTLTPGRLPTPT-----LGTARAPMPTPTLVRP 1373
Query: 509 ELELL---AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNA 565
L+L+ + EV A +PGA ++ + L P PA++P P P +P + +
Sbjct: 1374 LLKLVHSPSPEVSASAPGAAPLT-ISSPLHVPSSLPGPASSPMPIP--NSSPLASPVSST 1430
Query: 566 ALVDLDSLVSRPGPTPPGAKASNPF-LPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV 624
V L S + PT A AS P +P P T + PA LT L+PV
Sbjct: 1431 VSVPLSSSLPISVPTTLPAPASAPLTIPISAPLT-------VSASGPALLTSVTPPLAPV 1483
Query: 625 PPVPGAPPTYISPLGGGP 642
P PP+ ++P G P
Sbjct: 1484 VPAAPGPPS-LAPSGASP 1500
Score = 38.1 bits (87), Expect = 0.026
Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 522 PGAFDMSGVRGSLAEAVGS---PPPAA--TPTPTPPTRKTPESFLGPNAALVDLDSLVSR 576
PG +RG+ AE G+ P +A T + T P R +P P A R
Sbjct: 2391 PGTRVSERLRGARAETQGANHTPVISAHQTRSTTTPPRCSPARERVPRPA--------PR 2442
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYIS 636
P PTP A A+ P L V+ P + P +T+ + + P PP P P S
Sbjct: 2443 PRPTPASAPAAIPAL------VPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSS 2496
Query: 637 PLGGGPG--LPPMMPPGPPA 654
P P PP PPA
Sbjct: 2497 PACTPPPACTPPPAHTPPPA 2516
Score = 36.2 bits (82), Expect = 0.099
Identities = 80/317 (25%), Positives = 99/317 (31%), Gaps = 36/317 (11%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTS------DPWGGPPVPPAADPWGGPAPTPASGDP 406
PA AP P P P++A VP +AP PP P P PA TP
Sbjct: 2447 PASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACT 2506
Query: 407 WRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS-GPSASDPWTPAPAFSDPW 465
P A P TP+ GP P +S +P+ P A A A + P
Sbjct: 2507 -PPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAE---LCAQALASPE 2562
Query: 466 G---GSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSP 522
S A T+ + D P L + SA L L AG +P
Sbjct: 2563 SLELASVASSETSSLSLVPPKDLLPVAVEILPVSEKNLSLT-PSAPSLTLEAGSIP---- 2617
Query: 523 GAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
G EA S T T P + P N + + P P
Sbjct: 2618 --------NGQEQEAPDS-AEGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEPL 2668
Query: 583 GA-KASNPFLPGGGPATGPSVTNPFQPAP-PATLTLNQLRLSPVPPVPGAPP-----TYI 635
A + S P + P A A T + SP P P PP +
Sbjct: 2669 EADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRTSADV 2728
Query: 636 SPLGGGPGLPPMMPPGP 652
G G G P PPGP
Sbjct: 2729 EIRGQGTGRPG-QPPGP 2744
Score = 35.8 bits (81), Expect = 0.13
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 24/146 (16%)
Query: 531 RGSLAEAVGSPPPAATPTPT---------PPTRKTPESFLGPNAALVDLDSLVSRPGPTP 581
R L E +P P P P P ++ + + N L + RP P
Sbjct: 971 RRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRP---P 1027
Query: 582 PGAKASNPFLPGGGPATGP-----SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYI- 635
PG + S PG P P S + P PA+ + L P+ P G+ P +
Sbjct: 1028 PGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLP 1087
Query: 636 SPLG--GGPGLPPM----MPPGPPAP 655
SPLG G PP + P PPAP
Sbjct: 1088 SPLGVLSGTSRPPTPTLSLKPTPPAP 1113
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 70.1 bits (170), Expect = 6e-12
Identities = 125/510 (24%), Positives = 178/510 (34%), Gaps = 94/510 (18%)
Query: 137 EATSNDPWGPSSSLMSEIADLTYNVVA--FSEIMSMIWKRLNDHGKNWRHVYKAMTLMEY 194
EA S + P S +E+A + N + E M K L +HG+NW + + +
Sbjct: 589 EANSEEAITPQQS--AELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMV----- 641
Query: 195 LIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQLVALLRDEDRLREE 254
GS+ VSQ CK N Y F Y R D+ + + +L+ E
Sbjct: 642 ----GSKTVSQ-CK-NFY-------FNYKKRQNLDE--------------ILQQHKLKME 674
Query: 255 RAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQLALAMSKEEADQEE 314
+ + K+K A A + AA PP E ++SG ++EE
Sbjct: 675 KERNARRKKKKAPAAASEEAAF----PPVVEDEEMEASGVS--------------GNEEE 716
Query: 315 RIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAP---APTTDPWGGPAPMAAA 371
+ + L E + E G +++ + +D + P+P A GP P
Sbjct: 717 MVEEAEALHAS-GNEVPRGECSGP--ATVNNSSDTESIPSPHTEAAKDTGQNGPKP---- 769
Query: 372 VPTAAPTSDPWGGPPVPPAADPWGGPAPTPAS---GDPWRPAAPAGPSVDPWGGTPAPAA 428
P P GPP PP D PTPAS G P P AP PS P P
Sbjct: 770 -PATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPP-PVVPKEEK 827
Query: 429 GEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPD 488
E P + G P+A + +P + + G A G D E
Sbjct: 828 EEETAAAP--PVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEG--PAKGKDAEAA 883
Query: 489 EFSDFDRLRTALPTSGSSAGELELLAG----EVPARSPGAFDMSGVRGSLAEAVGSPPPA 544
E + L+ GS +G + + A ++ G + SP P+
Sbjct: 884 EATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPS 943
Query: 545 -ATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP-GAKASNPFLPGGGPATGPSV 602
TPT P +P+ L DL L R PP K P P +
Sbjct: 944 LLTPTGDPRANASPQKPL-------DLKQLKQRAAAIPPIVTKVHEP------PREDAAP 990
Query: 603 TNPFQPAPPATLTLNQLRLSPVPPVPGAPP 632
T P PAPP L S P PG+ P
Sbjct: 991 TKPAPPAPPPPQNLQP--ESDAPQQPGSSP 1018
Score = 32.3 bits (72), Expect = 1.4
Identities = 82/357 (22%), Positives = 113/357 (31%), Gaps = 68/357 (19%)
Query: 262 KEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQLALAMSKEEADQEERIRRGDD 321
+EK +TA A G P A + +G+ E ++ EE + + +
Sbjct: 825 EEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAE 884
Query: 322 LRLQMAIEESKRETGG-------------KEESSLMDLADV-----------FTAPAPA- 356
+ A++ K+E G +SS AD +P P+
Sbjct: 885 ATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSL 944
Query: 357 --PTTDPWGGPAPM-----------AAAVPT------------AAPTSDPWGGPPVPPAA 391
PT DP +P AAA+P AAPT PP P
Sbjct: 945 LTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAPPPPQNL 1004
Query: 392 DPWGGPAPTPAS---GDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSG 448
P P S G PA PA + PA AA P G+P
Sbjct: 1005 QPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPV 1064
Query: 449 PS----ASDPWTPAP-AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTS 503
P + P P P AFS G P + T A P S+ P
Sbjct: 1065 PPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDT--ARPVLPRPPTISN-------PPPL 1115
Query: 504 GSSAGELELLAGEVPARSPG-AFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPES 559
SSA +L ++ A S G + + A+A P P P P + P S
Sbjct: 1116 ISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFS 1172
Score = 32.0 bits (71), Expect = 1.9
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 578 GPTPPGAKASNPFLPGGGPATGP--SVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYI 635
GP PP ++ P GP T P + P +P P + T P PP P APP +
Sbjct: 766 GPKPPATLGADG--PPPGPPTPPPEDIPAPTEPTPASEAT-GAPTPPPAPPSPSAPPPVV 822
Score = 31.6 bits (70), Expect = 2.4
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 608 PAPPATLTLNQLRLSPVPPVPG--APPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
P PPATL + P P P PT +P G P PP PP+P+ P
Sbjct: 767 PKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATG-APTPPPAPPSPSAPP 819
Score = 31.2 bits (69), Expect = 3.2
Identities = 45/192 (23%), Positives = 66/192 (34%), Gaps = 30/192 (15%)
Query: 449 PSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAG 508
P+A P++ + S G P + TT++ + + D D DR R + ++
Sbjct: 1769 PTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTV 1828
Query: 509 ELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALV 568
E P PG SG GS GS + P + S + P
Sbjct: 1829 E------HAPIWRPGTEQSSGSSGSSGGGGGS-----SSRPASHSHAHQHSPISPRTQ-- 1875
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVP 628
D+L RP + N + G + +P+ P L SPV P
Sbjct: 1876 --DALQQRP------SVLHNTGMKG--------IITAVEPSTPTVLRSTSTS-SPVRPAA 1918
Query: 629 GAPPTYISPLGG 640
PP PLGG
Sbjct: 1919 TFPPATHCPLGG 1930
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 69.3 bits (168), Expect = 1e-11
Identities = 90/320 (28%), Positives = 112/320 (35%), Gaps = 53/320 (16%)
Query: 354 APAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA-- 411
+PA P P AAAVPT + P P P +P A P +P PAA
Sbjct: 1028 SPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTP--EEPTSPAAAVPTPEEPTSPAAAV 1085
Query: 412 -----PAGPSVD-PWGGTPAPAAGEGPTPDPWGSSDGGVPV----SGPSASDPWTPAPAF 461
P P+ P P A PTP+ S VP + P+A+ P PAF
Sbjct: 1086 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAF 1145
Query: 462 SDPWGGSP--------AKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELL 513
P +P A P+ + + P E + F + L S A +
Sbjct: 1146 PAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTP 1205
Query: 514 AGEVPA----RSPGA-FDMSGVRGSLAEAVGSP-----PPAATPTPTPPTRK-----TPE 558
A V SP A S SLA AV +P P AA PT PT TPE
Sbjct: 1206 AAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPE 1265
Query: 559 SFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQ 618
P A S+ + P P A SN P A P+ P A PA
Sbjct: 1266 ELSSPAA------SVPTPEEPASPAAAVSNLEEPASPAAAVPT---PEVAAIPAASV--- 1313
Query: 619 LRLSPVPPVPGAPPTYISPL 638
P P VP P + P+
Sbjct: 1314 ----PTPEVPAIPAAAVPPM 1329
Score = 62.8 bits (151), Expect = 1e-09
Identities = 94/325 (28%), Positives = 120/325 (36%), Gaps = 52/325 (16%)
Query: 354 APAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA-- 411
A PT + P AAAVPT + P VPP +P A P +P PAA
Sbjct: 1005 AAVPTPEE---PTSPAAAVPTPEEPTSP--AAAVPPPEEPTSPAAAVPTPEEPTSPAAAV 1059
Query: 412 -----PAGPSVD-PWGGTPAPAAGEGPTPDPWGSSDGGVPV----SGPSASDPWTP---- 457
P P+ P P A PTP+ S VP + P+A+ P TP
Sbjct: 1060 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP-TPEEPA 1118
Query: 458 APAFSDPWGGSPAKPSTNGTT------AAGGFDTEPDEFSDFDRLRTALPTSGSSAGELE 511
+PA + P PA P+ T A T + S A+PT SA
Sbjct: 1119 SPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESAS----AAVAVPTPEESASP-- 1172
Query: 512 LLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLD 571
A VP + A + V +L E + P A+ PTP T E F P A
Sbjct: 1173 --AAAVPTPAESA-SFAAVVATLEEP--TSPAASVPTPAAMV-ATLEEFTSPAA------ 1220
Query: 572 SLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLS----PVPPV 627
S+ + P A SNP P A P++ P A A LT +L P P
Sbjct: 1221 SVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSA-AAVLTPEELSSPAASVPTPEE 1279
Query: 628 PGAPPTYISPLGGGPGLPPMMPPGP 652
P +P +S L P P P P
Sbjct: 1280 PASPAAAVSNL-EEPASPAAAVPTP 1303
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 69.3 bits (168), Expect = 1e-11
Identities = 99/328 (30%), Positives = 116/328 (35%), Gaps = 76/328 (23%)
Query: 360 DPWGGPAPMAAAVPTAAP--TSDPWGGPPVPPAADPWGGPAPTPASGD----PWRPAAP- 412
DP G PAP A P+ P S+ W P + PA P+ PA + ASG W P
Sbjct: 590 DP-GVPAPQAPQAPSEVPQLVSETWASP-LFPAPRPF--PAQSSASGSFLLSGWDPEGRG 645
Query: 413 AGPSVDPWGGTPAPAAGEGPTPDPW---------GSSDGGVPVS---GPSASDPWTPAPA 460
AG ++ G PA GE T PW GSS G S GPS P P P
Sbjct: 646 AGETL---AGDPAEVLGERGTA-PWVEEEEEEEEGSSPGEDSSSLGGGPSRRGP-LPCPL 700
Query: 461 FSDPWGGSPAKPSTNGTTAAG-------GFDTEPDEFSDFDRLRTALPTSGSSAGELELL 513
S G P G AG G P++ S R G L L
Sbjct: 701 CSRE-GACSCLPLERGDAVAGWGGHPALGCPHPPEDDSSLRAER----------GSLADL 749
Query: 514 AGEVPARSPGAF--DMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLD 571
PA +P F + G G PP P P P P + P +A+
Sbjct: 750 PMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPG 809
Query: 572 SLVSRPGPTP--PGAKASNPF-----LPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV 624
S +S PGP P G + PF PGGG A V P R P
Sbjct: 810 SGLSSPGPKPGDSGYETETPFSPEGAFPGGGAAEEEGVPRP--------------RAPPE 855
Query: 625 PPVPGAPPTYISPLGGGPGLPPMMPPGP 652
PP PGAP P P+ PGP
Sbjct: 856 PPDPGAPRP-------PPDPGPLPLPGP 876
Score = 56.2 bits (134), Expect = 9e-08
Identities = 99/381 (25%), Positives = 127/381 (33%), Gaps = 120/381 (31%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADP------------------W 394
P P P P+ P P A + P S P+ P ADP W
Sbjct: 451 PPPPPRDGPFPWPWPPAHSAPRPGTLSSPFPLLDGFPGADPDDVLTVTESSRGLNLECLW 510
Query: 395 -----------GGPAPTPASGDPWRPAAPAGP--------SVDPWGGTPAPAAGE----- 430
G PA PAS P A P+ P SV P +P+
Sbjct: 511 EKARRGAGRGGGAPAWQPASAPPAPHANPSNPFYEALSTPSVLPVISARSPSVSSEYYIR 570
Query: 431 ----GPTPDP-----WGSSDGGVPV----SGPS-----ASDPWTPAPAFSDPWGGSPAKP 472
G P+P W D GVP PS S+ W +P F P PA+
Sbjct: 571 LEEHGSPPEPLFPNDWDPLDPGVPAPQAPQAPSEVPQLVSETWA-SPLFPAP-RPFPAQS 628
Query: 473 STNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRG 532
S +G+ G+D E G AGE LAG+ PA ++ G RG
Sbjct: 629 SASGSFLLSGWDPE-----------------GRGAGET--LAGD-PA------EVLGERG 662
Query: 533 SLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTP------PGAKA 586
+ P + E P L SR GP P GA +
Sbjct: 663 T--------------APWVEEEEEEEEGSSPGEDSSSLGGGPSRRGPLPCPLCSREGACS 708
Query: 587 SNPFLPG---GGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVP--GAPPTYISPLGG- 640
P G G P++ P P ++L + L+ +P P APP ++ PL G
Sbjct: 709 CLPLERGDAVAGWGGHPALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGA 768
Query: 641 ------GPGLPPMMPPGPPAP 655
G G PP PP PP P
Sbjct: 769 AAPQYPGRGPPPAPPPPPPPP 789
Score = 50.8 bits (120), Expect = 4e-06
Identities = 76/283 (26%), Positives = 92/283 (32%), Gaps = 54/283 (19%)
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAG--EGPTPDPWGSSDGGVP 445
PP PW P P + + W PA P G PAP P P SS G
Sbjct: 1047 PPETGPWRAPGPWEKTPESWGPA--------PTIGEPAPETSLERAPAPSAVVSSRNG-- 1096
Query: 446 VSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGS 505
G +A P PAP NGT G P E R A
Sbjct: 1097 --GETAPGPLGPAP--------------KNGTLEPGTERRAP-ETGGAPRAPGAGRLDLG 1139
Query: 506 SAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATP----------TPTPPTRK 555
S G + G P PG+ + G + PPP P P PP +
Sbjct: 1140 SGGRAPVGTGTAPGGGPGS-GVDAKAGWVDNTRPQPPPPPLPPPPEAQPRRLEPAPPRAR 1198
Query: 556 ---TPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQ---PA 609
PE G + D+ +S G PP + P +P GP N Q
Sbjct: 1199 PEVAPEGEPGAPDSRAGGDTALSGDG-DPPKPERKGPEMPRLFLDLGPPQGNSEQIKARL 1257
Query: 610 PPATLTLNQLRLSPVP-PVPGAPPTYISPLG------GGPGLP 645
+L L L L+P P P P PP + G GG G P
Sbjct: 1258 SRLSLALPPLTLTPFPGPGPRRPPWEGADAGAAGGEAGGAGAP 1300
Score = 45.1 bits (105), Expect = 2e-04
Identities = 93/391 (23%), Positives = 118/391 (30%), Gaps = 87/391 (22%)
Query: 339 EESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPP--------- 389
E SL DL A AP DP G AA P GPP P
Sbjct: 742 ERGSLADLPMAPPASAPPEFLDPLMG----------AAAPQYPGRGPPPAPPPPPPPPRA 791
Query: 390 AADPWGGPAPTPASGDPWRPAAPAGPSVDPWG-GTPAPAAGEGPTPDPWGSSDGGV--PV 446
ADP P P A P + GP G T P + EG P + + GV P
Sbjct: 792 PADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAAEEEGVPRPR 851
Query: 447 SGPSASDPWTPAPAFSD---PWGGSPAKPS------------------------TNGTTA 479
+ P DP P P P G KP+ G TA
Sbjct: 852 APPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNLLGEKGATA 911
Query: 480 -------AGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPA------RSPGAFD 526
AG ++ +R T L +G A L L V R+PG +
Sbjct: 912 RETGPRKAGRGPGNREKVPGLNRDPTVL-GNGKQAPSLSLPVNGVTVLENGDQRAPGIEE 970
Query: 527 MSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKA 586
+ G+L TPP R+ G + + ++ G TPP K+
Sbjct: 971 KAAENGALGSPEREEKVLENGELTPPRREEKALENGELRSPEAGEKVLVNGGLTPP--KS 1028
Query: 587 SNPFLPGGG----------PATGP--------SVTNPFQPAPPATLTLNQLRLSPVPPVP 628
+ GG P TGP + PAP + L P
Sbjct: 1029 EDKVSENGGLRFPRNTERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLERAP--- 1085
Query: 629 GAPPTYISPLGGGPGLPPMMPPGPPAPNTNP 659
AP +S GG P + P P P
Sbjct: 1086 -APSAVVSSRNGGETAPGPLGPAPKNGTLEP 1115
Score = 44.7 bits (104), Expect = 3e-04
Identities = 75/335 (22%), Positives = 92/335 (27%), Gaps = 68/335 (20%)
Query: 353 PAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAP 412
P P P P + A P A P P G P P + GG GDP +P
Sbjct: 1175 PPPPLPPPPEAQPRRLEPAPPRARPEVAPEGEPGAPDSRA--GGDTALSGDGDPPKPERK 1232
Query: 413 AGPSVD--------PWGG------------------TPAPAAGEGPTPDPWGSSDGGVPV 446
GP + P G T P G GP PW +D G
Sbjct: 1233 -GPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPWEGADAGA-- 1289
Query: 447 SGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS 506
+G A P PA D G D + DE D +
Sbjct: 1290 AGGEAGGAGAPGPAEED------------------GEDEDEDEEEDEEAAAPGAAAGPRG 1331
Query: 507 AGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPT------------- 553
G V S A +RG L G+ P +
Sbjct: 1332 PGRARAAPVPVVVSSADADAARPLRGLLKSPRGADEPEDSELERKRKMVSFHGDVTVYLF 1391
Query: 554 -RKTPESFLGPNAALV-DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVT----NPFQ 607
++TP + L A D D PTPP P G S P
Sbjct: 1392 DQETPTNELSVQAPPEGDTDPSTPPAPPTPPHPATPGDGFPSNDSGFGGSFEWAEDFPLL 1451
Query: 608 PAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
P P L ++ +SP PG P GP
Sbjct: 1452 PPPGPPLCFSRFSVSPALETPGPPARAPDARPAGP 1486
Score = 43.5 bits (101), Expect = 6e-04
Identities = 95/402 (23%), Positives = 114/402 (28%), Gaps = 97/402 (24%)
Query: 324 LQMAIEESKRETGGKEES---SLMDLADVFTAPAPAPTTDPWGGPAP----MAAAVPTAA 376
L+ E ETGG + +DL AP T P GGP A V
Sbjct: 1113 LEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTA-PGGGPGSGVDAKAGWVDNTR 1171
Query: 377 PTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPD- 435
P P PP P A PAP A + P P G T G+ P P+
Sbjct: 1172 PQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEGEPGAPDSRAGGDTALSGDGDPPKPER 1231
Query: 436 --------------PWGSSD----------------GGVPVSGPS-ASDPWTPAPAFSDP 464
P G+S+ P GP PW A A +
Sbjct: 1232 KGPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPWEGADAGAA- 1290
Query: 465 WGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
GG G G D + DE D + G V S A
Sbjct: 1291 -GGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAAPVPVVVSSADA 1349
Query: 525 FDMSGVRGSLAEAVGSPPP------------------------AATPTPTPPTRKTPESF 560
+RG L G+ P TPT + PE
Sbjct: 1350 DAARPLRGLLKSPRGADEPEDSELERKRKMVSFHGDVTVYLFDQETPTNELSVQAPPEG- 1408
Query: 561 LGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGG-PATGPSVTNPFQPAPPATLTLNQL 619
D D PTPP +P PG G P+ F+ A
Sbjct: 1409 --------DTDPSTPPAPPTPP-----HPATPGDGFPSNDSGFGGSFEWAED-------- 1447
Query: 620 RLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPP--APNTNP 659
P+ P PG PP S P L PGPP AP+ P
Sbjct: 1448 --FPLLPPPG-PPLCFSRFSVSPALE---TPGPPARAPDARP 1483
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 69.3 bits (168), Expect = 1e-11
Identities = 91/307 (29%), Positives = 114/307 (37%), Gaps = 77/307 (25%)
Query: 341 SSLMDLADVFTAPAPAPT-----TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWG 395
S LAD +PA T T P G P P P S+PW P P +
Sbjct: 2 SDEFSLADALPEHSPAKTSAVSNTKP-GQP-------PQGWPGSNPWNNPSAPSSVPSGL 53
Query: 396 GPAPTPASGDPWRPAAPAG--PSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASD 453
P+ TP++ P+ PA P G PSV P G P P P P+ P SGPS
Sbjct: 54 PPSATPSTV-PFGPA-PTGMYPSVPPTGPPPGP-------PAPF-------PPSGPSCPP 97
Query: 454 PWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELL 513
P P PA P+ G G + T F + R A PT ++AG L
Sbjct: 98 PGGPYPA-----------PTVPGPGPTGPYPTPNMPFPELPRPYGA-PTDPAAAGPLG-- 143
Query: 514 AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSL 573
P S + + G P P+ P P PP + P + P
Sbjct: 144 ----PWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGA--APPVPW------ 191
Query: 574 VSRPGPTPPGA---KASNPFLPGGGPATG--PSVTNPFQ-PAPPATLTLNQLRLSPVPPV 627
G PPGA A P G P G P+ +NPFQ P+ P S PP+
Sbjct: 192 ----GTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGP----------SGAPPM 237
Query: 628 PGAPPTY 634
PG P +Y
Sbjct: 238 PGGPHSY 244
Score = 42.7 bits (99), Expect = 0.001
Identities = 51/188 (27%), Positives = 66/188 (35%), Gaps = 31/188 (16%)
Query: 488 DEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATP 547
DEFS D L P S+ + G+ P PG+ + + G PP +ATP
Sbjct: 3 DEFSLADALPEHSPAKTSAVSNTK--PGQPPQGWPGSNPWNNPSAPSSVPSGLPP-SATP 59
Query: 548 TPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQ 607
+ P P + PGP P + P GGP P+V P
Sbjct: 60 STVPFGP-------APTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGP 112
Query: 608 PAPPATLTLNQLRLSPVPPVP---GAP--PTYISPLG------GGPGLPPM----MPPGP 652
P T + P P +P GAP P PLG GP P M P
Sbjct: 113 TGPYPTPNM------PFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNM 166
Query: 653 PAPNTNPF 660
P P+ P+
Sbjct: 167 PYPSPGPY 174
Score = 40.0 bits (92), Expect = 0.007
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 23/135 (17%)
Query: 542 PPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPF----LPGGGPA 597
PP P P PP+ + GP A V PGPT P + PF P G P
Sbjct: 80 PPPGPPAPFPPSGPSCPPPGGPYPA-----PTVPGPGPTGPYPTPNMPFPELPRPYGAP- 133
Query: 598 TGPSVTNPFQP-----APPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPP-----M 647
T P+ P P + P + +P P P P P PG P
Sbjct: 134 TDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGT 193
Query: 648 MPP---GPPAPNTNP 659
+PP GPPAP P
Sbjct: 194 VPPGAWGPPAPYPAP 208
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 68.6 bits (166), Expect = 2e-11
Identities = 97/356 (27%), Positives = 122/356 (34%), Gaps = 69/356 (19%)
Query: 338 KEESSLMDLADVFTAPAPAPTTDPWGGPA--PMAAAVPTAAPTSDPWGGPPVPPAADPWG 395
KE SLM A++ AP PA + GPA P+A+A AAP ++P PP+
Sbjct: 311 KEYLSLM--AELGEAPVPA-SVGSTSGPATTPLASAPRPAAPANNP-----PPPSL---- 358
Query: 396 GPAPTPASGDPWRPAAPAG--PSVDPWGGTPA-PAAGEGPTPDPWGSSDGGVPVSGPSAS 452
T S PW + P+ P GG P P G P P S GG P
Sbjct: 359 --MSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHG-GHPMQH 415
Query: 453 DPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELEL 512
+P P P PW P P G G P D+ + P GS L
Sbjct: 416 NPNGPPP----PWMQPPPPPMNQGPHPPGHHGPPP-----MDQYLGSTPV-GSGVYRLHQ 465
Query: 513 LAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAAT-------------PTPTPPTRKTPES 559
G +P G S G PPP + P P PP+ S
Sbjct: 466 GKGMMPPPPMGMMPPPPPPPS-----GQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS 520
Query: 560 FLGPNAALVDLDSLVSRPGPTPP------------------GAKASNPFLPGGGPATGPS 601
P + + G PP G P PG P P
Sbjct: 521 TPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG 580
Query: 602 VTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLG-GGPGLPPM-MPPGPPAP 655
P P PP + + P PP P P +++ +G G G+PP MPP PP P
Sbjct: 581 APPPPPPPPPGSAGM-MYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPP 635
Score = 31.6 bits (70), Expect = 2.4
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 13/93 (13%)
Query: 352 APAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPP-----AADPWGGPAPTPASGDP 406
A A +P G M P P P PP PP A + P P P DP
Sbjct: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDP 609
Query: 407 WRPAAPAGPSV---DPWGGTPAPAAGEGPTPDP 436
G V P+G PAP P P P
Sbjct: 610 SNFVTMMGMGVAGMPPFGMPPAP-----PPPPP 637
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
Length = 2462
Score = 67.8 bits (164), Expect = 3e-11
Identities = 142/578 (24%), Positives = 201/578 (34%), Gaps = 119/578 (20%)
Query: 137 EATSNDPWGPSSSLMSEIADLTYNVVA--FSEIMSMIWKRLNDHGKNWRHVYKAMTLMEY 194
EA S + P S +E+A + N + E M K L +HG+NW + + +
Sbjct: 589 EANSEEAITPQQS--AELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMV----- 641
Query: 195 LIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQLVALLRDEDRLREE 254
GS+ VSQ CK N Y F Y R D+ + + +L+ E
Sbjct: 642 ----GSKTVSQ-CK-NFY-------FNYKKRQNLDE--------------ILQQHKLKME 674
Query: 255 RAHALKTKEKLAQTATASSAAVGSGPPPEAEQAWPQS--SGEEELQLQLALAMSKEEADQ 312
+ + K+K A A + AA PP ++ S SG EE ++ A A +D
Sbjct: 675 KERNARRKKKKAPAAASEEAAF---PPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDT 731
Query: 313 EERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV 372
E + E+ ++TG L P P PT P PAP
Sbjct: 732 ES---------IPSPHTEAAKDTGQNGPKPPATLGADGPPPGP-PTPPPEDIPAPTE--- 778
Query: 373 PTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGE-- 430
PT P S+ G P PPA P P + A A P V+ PAA E
Sbjct: 779 PT--PASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETA-AAPPVEEGEEQKPPAAEELA 835
Query: 431 ---GPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSD------------------PWGGSP 469
G +P S GP+ A A ++ G+P
Sbjct: 836 VDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAP 895
Query: 470 AKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGE----------LELLAGEVPA 519
++ T +A D E D +RL + P+ + G+ L+L + A
Sbjct: 896 QDSDSSATCSADEVDEA--EGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRA 953
Query: 520 RSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGP 579
+ ++ V E +P A P P PP PES S P
Sbjct: 954 AAIPPIQVTKVHEPPREDA-APTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRS---P 1009
Query: 580 TPPGAK-ASNPF-----------LPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPV 627
PP K A P LPG P + PF P PP + ++ SP P
Sbjct: 1010 APPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGL--PF-PVPPREV----IKASPHAPD 1062
Query: 628 PGA----PPTYISPLGGGPGLPPMMPPGPPAPNTNPFL 661
P A PP + PLG P++P P N P +
Sbjct: 1063 PSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLI 1100
Score = 32.0 bits (71), Expect = 1.9
Identities = 82/358 (22%), Positives = 113/358 (31%), Gaps = 69/358 (19%)
Query: 262 KEKLAQTATASSAAVGSGPPPEAEQAWPQSSGEEELQLQLALAMSKEEADQEERIRRGDD 321
+EK +TA A G P A + +G+ E ++ EE + + +
Sbjct: 808 EEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAE 867
Query: 322 LRLQMAIEESKRETGG-------------KEESSLMDLADV-----------FTAPAPA- 356
+ A++ K+E G +SS AD +P P+
Sbjct: 868 ATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSL 927
Query: 357 --PTTDPWGGPAPM-----------AAAVPT-------------AAPTSDPWGGPPVPPA 390
PT DP +P AAA+P AAPT PP P
Sbjct: 928 LTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQN 987
Query: 391 ADPWGGPAPTPAS---GDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS 447
P P S G PA PA + PA AA P G+P
Sbjct: 988 LQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFP 1047
Query: 448 GPS----ASDPWTPAP-AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT 502
P + P P P AFS G P + T A P S+ P
Sbjct: 1048 VPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDT--ARPVLPRPPTISN-------PPP 1098
Query: 503 SGSSAGELELLAGEVPARSPG-AFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPES 559
SSA +L ++ A S G + + A+A P P P P + P S
Sbjct: 1099 LISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFS 1156
Score = 31.2 bits (69), Expect = 3.2
Identities = 45/192 (23%), Positives = 66/192 (34%), Gaps = 30/192 (15%)
Query: 449 PSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAG 508
P+A P++ + S G P + TT++ + + D D DR R + ++
Sbjct: 1753 PTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTV 1812
Query: 509 ELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALV 568
E P PG SG GS GS + P + S + P
Sbjct: 1813 E------HAPIWRPGTEQSSGSSGSSGGGGGS-----SSRPASHSHAHQHSPISPRTQ-- 1859
Query: 569 DLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVP 628
D+L RP + N + G + +P+ P L SPV P
Sbjct: 1860 --DALQQRP------SVLHNTGMKG--------IITAVEPSTPTVLRSTSTS-SPVRPAA 1902
Query: 629 GAPPTYISPLGG 640
PP PLGG
Sbjct: 1903 TFPPATHCPLGG 1914
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 67.8 bits (164), Expect = 3e-11
Identities = 101/430 (23%), Positives = 142/430 (33%), Gaps = 96/430 (22%)
Query: 283 EAEQAWPQSSGEEELQLQLALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEESS 342
E + W + E + +L + ++ D +E G + EE E GK+ +S
Sbjct: 321 ENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNS 380
Query: 343 LMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGP-PVPPAADP-------W 394
P ++P P P A T+ P G P P PP P W
Sbjct: 381 --------------PNSEP---PTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNW 423
Query: 395 GGPAPTP-ASGDPWRPAAPAGPSVDPWGGTPAPAAGE----------------------- 430
G P P G P +P AP + W ++ E
Sbjct: 424 GPPGDYPDRGGPPCKPPAPEDED-EAWRQRRKQSSSEISLAVERARRRREEEERRMQEER 482
Query: 431 --------GPTPDPWGSSDGGV---PVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTA 479
+ +G+ D + P + P+A P PA PA P + T
Sbjct: 483 RAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTP 542
Query: 480 AGGFDTEPDEFSDFDRLRTALPTSG-SSAGELELLAGEVPARSPGAFDMSGVRGSLAEAV 538
+TEP+E + ++ PT G ++A L G + S G+F+ S V L
Sbjct: 543 ----ETEPEEPAQAPPAQST-PTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKE 597
Query: 539 GSPPPAATPTPTP--------------PTRKTPESFLGPNAALVDLDSLVSRPGPTPPGA 584
G PP P PT PTR+ P LG L R
Sbjct: 598 GPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLK 657
Query: 585 KAS----NPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGG 640
+ G P T P P+PP +TL + P P P PP + P G
Sbjct: 658 QQQQHQWQQHQQGSAPPT------PVPPSPPQPVTLGAV---PAPQAPPPPPKALYP--G 706
Query: 641 GPGLPPMMPP 650
G PP MPP
Sbjct: 707 ALGRPPPMPP 716
Score = 66.2 bits (160), Expect = 9e-11
Identities = 109/422 (25%), Positives = 143/422 (33%), Gaps = 78/422 (18%)
Query: 281 PPEAEQAWPQSSGEEELQLQLALAMSKEEADQEERIRRGDDLRLQMAIEESKRETGGKEE 340
P + ++AW Q + ++ LA+ ++ ++EER R + R E+ KR
Sbjct: 442 PEDEDEAWRQRRKQSSSEISLAVERARRRREEEER--RMQEERRAACAEKLKR------- 492
Query: 341 SSLMDLADVFTAPAPAPTTDPWGGP-APMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAP 399
L + F AP +P P AP A P A P P PP PP A AP
Sbjct: 493 -----LDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELP--APPAPPPAS-----AP 540
Query: 400 TPASGDPWRPA-APAGPSVDPWGGTPAP--AAGEGPTPDPWGSSDGGVPVSGPSASDPWT 456
TP + +P PA AP S G AP +G G T S PV P
Sbjct: 541 TPET-EPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVE-PQLPSKEG 598
Query: 457 PAPAFSDPWGGSPAKPSTNGT-TAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAG 515
P P P +P P G P + + + + +LP + +LL
Sbjct: 599 PEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQ 658
Query: 516 E-----------------VPARSPGAFDMSGVRGSLAEAVGSPPPAA-------TPTPTP 551
+ VP P + V A PPP A P P P
Sbjct: 659 QQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVP---APQAPPPPPKALYPGALGRPPPMP 715
Query: 552 PTRKTPESFLGPNAALVDLDSLVSRPGPT--PPGAKASNPFLPGGGPATGPSVTNPFQPA 609
P P + P VD L RP PPG S +P +G S + PF
Sbjct: 716 PMNFDPRWMMIP--PYVDPRLLQGRPPLDFYPPGVHPSG-LVPRERSDSGGSSSEPFDRH 772
Query: 610 PPATLTLNQLRLSPVPP-----------VPGAPPTYISPL-----GGGPGLPPMMPPGPP 653
PA L + PV P P P SPL G+ PP PP
Sbjct: 773 APA--MLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPP 830
Query: 654 AP 655
P
Sbjct: 831 PP 832
Score = 39.7 bits (91), Expect = 0.009
Identities = 76/303 (25%), Positives = 103/303 (33%), Gaps = 60/303 (19%)
Query: 376 APTSDPWGGPPVPPAADPWGGPAPTPASG-DPWRPAA---------PAGPSVDPWGGTPA 425
AP P P +P A GP+P P + +P R + GP V GGTP
Sbjct: 1492 APGGHPRHKPGLPQAPQ---GPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPR 1548
Query: 426 PAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDT 485
+AG P P P + P P S G P P + G T
Sbjct: 1549 DSAGVSPFPPKRRERP---PRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTG--T 1603
Query: 486 EPDEFSDFDRLRTALPTSGSSAGELEL----------LAGEVPARSPGAFDMSGVRGSLA 535
E ++RL TA +E +AG ++S D+SG
Sbjct: 1604 EALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSG-----D 1658
Query: 536 EAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGG 595
V S P + +P + E GP RPG + P
Sbjct: 1659 SQVSSGPCSQRSSPDGGLKGAAE---GP----------PKRPGGSSP---------LNAV 1696
Query: 596 PATGPSVTNPFQPAPPATLTLNQLRL---SPVPPVP-GAPPTYISPLGGGPG-LPPMMPP 650
P GP + P + PPA ++ L P+PP P G + + G PG + P P
Sbjct: 1697 PCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRP 1756
Query: 651 GPP 653
GPP
Sbjct: 1757 GPP 1759
Score = 38.1 bits (87), Expect = 0.026
Identities = 81/341 (23%), Positives = 104/341 (30%), Gaps = 70/341 (20%)
Query: 355 PAPTTDPWGGPAPMAAAV-PTAAPTSDPWGGPPVPPAADP------------------W- 394
P PTT P P + PT P S G P + P W
Sbjct: 606 PPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQ 665
Query: 395 ----GGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPS 450
G PTP P +P G PAP A P + + G P P
Sbjct: 666 QHQQGSAPPTPVPPSPPQPVT--------LGAVPAPQAPPPPPKALYPGALGRPPPMPPM 717
Query: 451 ASDP-WTPAPAFSDP---WGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSS 506
DP W P + DP G P G +G P E SD SG S
Sbjct: 718 NFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSG---LVPRERSD----------SGGS 764
Query: 507 AGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA 566
+ E R G + + + + P P +P + E G +
Sbjct: 765 SSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSE 824
Query: 567 LVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTN-PFQPAPPATLT----LNQLRL 621
+ P P PP AS P P G A GP ++ P + P L +++
Sbjct: 825 --------TPPVPPPPPYLASYPGFPENG-APGPPISRFPLEEPGPRPLPWPPGSDEVAK 875
Query: 622 SPVPPVPGAPPTYISPLGGGP--GLPPMM-----PPGPPAP 655
PP PP + GP G P GPP P
Sbjct: 876 IQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPP 916
Score = 38.1 bits (87), Expect = 0.026
Identities = 78/301 (25%), Positives = 100/301 (33%), Gaps = 65/301 (21%)
Query: 368 MAAAVPTAAPTSDPWGG-PPVPPAADPW------GGPAPTPAS-GDPWRPAA---PAGPS 416
+ A+V A P S W P +A+P G P P+S G P AGPS
Sbjct: 1785 LTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPS 1844
Query: 417 VDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNG 476
G G + GG PS P+ P + P G +P +G
Sbjct: 1845 SSQISG--------GAMDSQLHPNSGGFRPGTPSLH-PYRSQPLYLPP-GPAPPSALLSG 1894
Query: 477 TTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAE 536
G +F DF ++ A EL L P +F S
Sbjct: 1895 LALKG-------QFLDFSTMQ---------ATELGKLPAGGVLYPPPSFLYS-------- 1930
Query: 537 AVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGP 596
PA P+P P T S L L S P PG ++ FLP G P
Sbjct: 1931 ------PAFCPSPLPDT-----SLLQVRQDLPSPSDFYSTP--LQPGGQSG--FLPSGAP 1975
Query: 597 ATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPN 656
A + P +N L P PP P PP + P+G P + PPAP
Sbjct: 1976 AQQMLLPMVDSQLP----VVNFGSLPPAPP-PAPPPLSLLPVGPALQPPSLAVRPPPAPA 2030
Query: 657 T 657
T
Sbjct: 2031 T 2031
Score = 36.6 bits (83), Expect = 0.076
Identities = 72/280 (25%), Positives = 87/280 (31%), Gaps = 53/280 (18%)
Query: 346 LADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGD 405
+ DVFTA P P P AA S+ PPVPP P P AS
Sbjct: 792 VGDVFTATPAEPR--PLTSPLRQAADEDDKGMRSET---PPVPP-------PPPYLASYP 839
Query: 406 PWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPW--GSSDGGVPVSGPSASDPWTPAPAFSD 463
+ GP + + P GP P PW GS + + P +P P +
Sbjct: 840 GFPENGAPGPPISRF-----PLEEPGPRPLPWPPGSDEVAKIQTPPPKKEP--PKEETAQ 892
Query: 464 PWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPG 523
G + G +GG P R P GSS
Sbjct: 893 LTGPEAGRKPARGV-GSGGQGPPPPRRESRTETRWG-PRPGSSR---------------- 934
Query: 524 AFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPG 583
RG E G+PP A P PP E P L D P P P
Sbjct: 935 -------RGIPPEEPGAPPRRAGPIKKPPPPTKVEEL--PPKPLEQGDETPKPPKPDP-- 983
Query: 584 AKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSP 623
K + L GGP P N PAP + R+ P
Sbjct: 984 LKITKGKL--GGPKETPPNGN-LSPAPRLRRDYSYERVGP 1020
Score = 35.0 bits (79), Expect = 0.22
Identities = 77/307 (25%), Positives = 101/307 (32%), Gaps = 73/307 (23%)
Query: 334 ETGGKEESSLMDLADVFTAPAPAPTTDP-----W---GGPAPMAAAVPTAA--PTSDPWG 383
+ G ++ + + + P P+ P W GG P P + DP G
Sbjct: 174 QAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRG 233
Query: 384 G--PPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSD 441
G P PP P+ G P P P+ P P P +GP P
Sbjct: 234 GLQPSGPPQFPPYRGMMP-PFMYPPYLPFPP-------------PYGPQGPYRYPTPDGP 279
Query: 442 GGVP-VSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTAL 500
P V+GP S P +P G +PS + D +FD+L
Sbjct: 280 SRFPRVAGPRGSGP---PMRLVEPVG----RPSI----------LKEDNLKEFDQLDQEN 322
Query: 501 PTSGSSAGE----LELL--AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAA------TPT 548
+ A E E L + E R G R S + + PP A +P
Sbjct: 323 DDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPN 382
Query: 549 PTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFL--PGGGPA--TGPSVTN 604
PPT KT + SRP T PG A P L P GPA GP
Sbjct: 383 SEPPTPKTAWAE-------------TSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDY 429
Query: 605 PFQPAPP 611
P + PP
Sbjct: 430 PDRGGPP 436
Score = 33.9 bits (76), Expect = 0.49
Identities = 54/220 (24%), Positives = 71/220 (32%), Gaps = 19/220 (8%)
Query: 447 SGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGS- 505
S P +SD T P S P S S + P S A T G+
Sbjct: 93 SDPKSSDASTAQPPESQPLPASQTPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAH 152
Query: 506 -SAGELELLAG-----EVPA-RSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR---- 554
G L E P ++ G D + AE P P+ P + R
Sbjct: 153 GDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGG 212
Query: 555 KTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL 614
+ P+ GP++ L R G P G P+ P P P+ P PP
Sbjct: 213 RGPDELEGPDSKLHHGHD--PRGGLQPSGPPQFPPYRGMMPPFMYP----PYLPFPPPYG 266
Query: 615 TLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPA 654
R P P P P P G GP + + P G P+
Sbjct: 267 PQGPYRY-PTPDGPSRFPRVAGPRGSGPPMRLVEPVGRPS 305
Score = 33.9 bits (76), Expect = 0.49
Identities = 66/271 (24%), Positives = 83/271 (30%), Gaps = 26/271 (9%)
Query: 321 DLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSD 380
D A E K GG L P+P P T V P+
Sbjct: 1903 DFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPDTS--------LLQVRQDLPSPS 1954
Query: 381 PWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSS 440
+ P+ P P+ PA P V+ PAP P P P
Sbjct: 1955 DFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPP----PAPPPLSLL 2010
Query: 441 DGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTAL 500
G + PS + PAPA SPA+P A E F D+ +L + L
Sbjct: 2011 PVGPALQPPSLAVRPPPAPATRVL--PSPARPFPASLGRAELHPVELKPFQDYQKLSSNL 2068
Query: 501 --------PTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPP 552
P +G S L P+ G F V SPP A P P
Sbjct: 2069 GGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVD---LYQQASPPDALRWIPKPW 2125
Query: 553 TRKTPESFLGPNAALVDLDSLVSR-PGPTPP 582
R P GP+ + S + PG PP
Sbjct: 2126 ERTGPPPREGPSRRAEEPGSRGDKEPGLPPP 2156
Score = 31.2 bits (69), Expect = 3.2
Identities = 35/113 (30%), Positives = 41/113 (36%), Gaps = 26/113 (23%)
Query: 539 GSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPAT 598
GS PPA P P PP P +GP + SL RP P P + LP
Sbjct: 1994 GSLPPAPPPAP-PPLSLLP---VGP---ALQPPSLAVRPPPAP-----ATRVLPS----- 2036
Query: 599 GPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPG 651
PA P +L + L PV P +S GGPG P G
Sbjct: 2037 ---------PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTG 2080
Score = 30.0 bits (66), Expect = 7.1
Identities = 71/269 (26%), Positives = 91/269 (33%), Gaps = 49/269 (18%)
Query: 398 APTPASGDPWR-PAAPAGPSVDPWGGTPAPA---AGEGPTPDPWG-----SSDGGVPVSG 448
APTP G + P AP P P +PAPA A G P G GG P
Sbjct: 1124 APTPKEGTLTQVPLAPPPPGAPP---SPAPARFTARGGRVFTPRGVPSRRGRGGGRPP-- 1178
Query: 449 PSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAG 508
P W+P PA S +P KP T + EP + + + GS+ G
Sbjct: 1179 PQVCPGWSP-PAKSL----APKKPPTGPLPPS----KEPLKEKLIPGPLSPVARGGSNGG 1229
Query: 509 E-LELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPP----------AATPTPTPPTRKTP 557
+ + GE P R R A+ PP AA + P+ P
Sbjct: 1230 SNVGMEDGERPRRR---------RHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLP 1280
Query: 558 ESFLGPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLN 617
S GP AL + P P A A +P L + T
Sbjct: 1281 ASAPGPEEALTTVTV-----APAPRRAAAKSPDLSNQNSDQANEEWETASESSDFTSERR 1335
Query: 618 QLRLSPVPPVPGAPPTYISPLGGGPGLPP 646
+ +P PPV P +P GGG G P
Sbjct: 1336 GDKEAP-PPVLLTPKAVGTPGGGGGGAVP 1363
Score = 29.6 bits (65), Expect = 9.3
Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 21/169 (12%)
Query: 466 GGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-SGSSAGELELLAGEVPARSPGA 524
GG P+ G TA+ +E E+ + + R + +GS E +L + A +P
Sbjct: 1071 GGPNHPPAPRGRTASET-RSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPK- 1128
Query: 525 FDMSGVRGSLAEA-VGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPG 583
G+L + + PPP A P+P P F + + SR G G
Sbjct: 1129 ------EGTLTQVPLAPPPPGAPPSP------APARFTARGGRVFTPRGVPSRRG--RGG 1174
Query: 584 AKASNPFLPGGGPATGPSVTN--PFQPAPPATLTLNQLRLSPVPPVPGA 630
+ PG P P P PP+ L + +L P P P A
Sbjct: 1175 GRPPPQVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKE-KLIPGPLSPVA 1222
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 67.4 bits (163), Expect = 4e-11
Identities = 86/331 (25%), Positives = 107/331 (32%), Gaps = 54/331 (16%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPT---AAPTSDPWGGPPVP--PAADPWGGPAPT-PASG 404
T PAPTT P PT +APT+ P P PA PAPT P
Sbjct: 266 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Query: 405 DPWRPAAPAGPSVDPWGGTP---APAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P P PA + +P TP AP A + P P P+ + P PAP
Sbjct: 326 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP---------TTPKEPAPTTPKEPAPTT 376
Query: 462 S-DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
+ +P +P +P+ T +A EP PT+ SA +
Sbjct: 377 TKEPSPTTPKEPAPTTTKSAPTTTKEP------------APTTTKSAPTTPKEPSPTTTK 424
Query: 521 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT 580
P + + P P P P T K P P + P PT
Sbjct: 425 EPAP---TTPKEPAPTTPKKPAPTTPKEPAPTTPKEP----APTTTKKPAPTTPKEPAPT 477
Query: 581 PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQL--------------RLSPVPP 626
P K + P P T P P P PA T +L +P P
Sbjct: 478 TP--KETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTP 535
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
AP T P P P P PAP T
Sbjct: 536 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 566
Score = 65.9 bits (159), Expect = 1e-10
Identities = 81/325 (24%), Positives = 106/325 (32%), Gaps = 27/325 (8%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT AP P T +P P PA PAPT P P
Sbjct: 243 TPKEPAPTTTK---SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK 299
Query: 411 APAGPSVDPWGGT----PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP-AFSDPW 465
PA + T PAP + PTP + P+ + P PAP A P
Sbjct: 300 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTT--PKEPAPTTKEPAPTTPKEPAPTAPKKPA 357
Query: 466 GGSPAKPS-TNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+P +P+ T A EP + + T ++ ++ E + +P
Sbjct: 358 PTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 417
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT---- 580
+ + P P P P T K P P + +P PT
Sbjct: 418 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----APTTPKEPAPTTTKKPAPTTPKE 473
Query: 581 --PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLR-LSPVPPVPGAP--PTYI 635
P K + P P T P P P PA T +L +P P P P P
Sbjct: 474 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPT 533
Query: 636 SPLGGGPGL---PPMMPPGPPAPNT 657
+P P P P PAP T
Sbjct: 534 TPKAAAPNTPKEPAPTTPKEPAPTT 558
Score = 60.8 bits (146), Expect = 4e-09
Identities = 86/341 (25%), Positives = 113/341 (33%), Gaps = 40/341 (11%)
Query: 331 SKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV---PTAAPTSDPWGGPPV 387
S +ET E++S DLA PT+ P P A P +P P
Sbjct: 172 SAKETQSIEKTSAKDLA---------PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPK 222
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGT---PAPAAGEGP---TPDPWGSSD 441
PA+ P PT P P PA + T PAP + P TP +
Sbjct: 223 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTT 282
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP 501
P + S P TP +P +P KP+ TT T P E + A P
Sbjct: 283 TKEPAPTTTKSAPTTP----KEPAPTTPKKPAP--TTPKEPAPTTPKEPTPTTPKEPA-P 335
Query: 502 TSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFL 561
T+ A + P + + P P T P+P T K P
Sbjct: 336 TTKEPAPTTPKEPAPTAPKKPAP---TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT 392
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAP-----PATLTL 616
+A + P PT + + P P P+ T P +PAP PA T
Sbjct: 393 TKSA-----PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 447
Query: 617 NQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
+ +P P AP T P P P P AP T
Sbjct: 448 KE--PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 486
Score = 59.7 bits (143), Expect = 8e-09
Identities = 80/316 (25%), Positives = 100/316 (31%), Gaps = 48/316 (15%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT PAP P APT+ P P P TP + + P
Sbjct: 446 TPKEPAPTTPK--EPAPTTTKKP--APTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPT 501
Query: 411 APAGPSVDPWGGTP---APAAGEGPTP----DPWGSSDGGVPVSGPSASDPWTPA-PAFS 462
P P+ TP AP E PTP +P ++ + P P TP PA +
Sbjct: 502 TPEKPAPT----TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT 557
Query: 463 DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSP 522
P +P P T G T P L+ PT+ EL +
Sbjct: 558 TPKEPAPTTPKETAPTTPKG--TAPTT------LKEPAPTTPKKPAPKELAPTTTKEPTS 609
Query: 523 GAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
D A +P A TP P TP+ + + P PT P
Sbjct: 610 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG---------TAPTTLKEPAPTTP 660
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
A P GP+ T +PAP P AP T P P
Sbjct: 661 KKPAPKELAPT--TTKGPTSTTSDKPAPTT-------------PKETAPTTPKEPAPTTP 705
Query: 643 GLPPMMPPGPPAPNTN 658
P P P P T+
Sbjct: 706 KKPAPTTPETPPPTTS 721
Score = 48.9 bits (115), Expect = 1e-05
Identities = 81/322 (25%), Positives = 108/322 (33%), Gaps = 63/322 (19%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTA----APTSDPWGGPPVPPAADPWGGPAPTPASGDP 406
T PAPTT P PT APT+ P P P PTP + +
Sbjct: 470 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE 529
Query: 407 WRPAAP--AGPSV--DPWGGTP---APAAGEGPTPDPWGSSDGGVP-------VSGPSAS 452
P P A P+ +P TP AP + P P + P + P+ +
Sbjct: 530 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 589
Query: 453 DPWTPAP------AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-SGS 505
P PAP +P + KP+ TT G T P E + A T G+
Sbjct: 590 TPKKPAPKELAPTTTKEPTSTTCDKPAP--TTPKGTAPTTPKEPAPTTPKEPAPTTPKGT 647
Query: 506 SAGELELLAGEVPAR-SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPN 564
+ L+ A P + +P + +G + P P TP T PT TP+
Sbjct: 648 APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT-TPKETAPT--TPKE----- 699
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL------TLNQ 618
P PT P K P P P T V+ P P T+ + +
Sbjct: 700 ------------PAPTTP--KKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 745
Query: 619 LRLSPVPPV-------PGAPPT 633
L P P PG P T
Sbjct: 746 LSAEPTPKALENSPKEPGVPTT 767
Score = 46.6 bits (109), Expect = 7e-05
Identities = 67/269 (24%), Positives = 92/269 (34%), Gaps = 25/269 (9%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T P PTT PAP AAP + P P P P P + P
Sbjct: 518 TPEEPTPTTPE--EPAPTTP--KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 573
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS---------GPSASDPWTP-APA 460
P G + PAP + P P + P S P + P TP PA
Sbjct: 574 TPKGTAPTTL-KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 632
Query: 461 FSDPWGGSPAKP-STNGTTAAGGFDTEPDEFSDFDRLRTAL--PTSGSSAGELELLAGEV 517
+ P +P P T TT T P + + + T PTS +S E
Sbjct: 633 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 692
Query: 518 PARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESF-LGPNAALVDLDSLVSR 576
+P + + +PPP + TP T K P + P+ + +L +
Sbjct: 693 APTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA---- 748
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNP 605
PTP A ++P PG P+ T P
Sbjct: 749 -EPTPK-ALENSPKEPGVPTTKTPAATKP 775
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 67.4 bits (163), Expect = 4e-11
Identities = 86/331 (25%), Positives = 107/331 (32%), Gaps = 54/331 (16%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPT---AAPTSDPWGGPPVP--PAADPWGGPAPT-PASG 404
T PAPTT P PT +APT+ P P PA PAPT P
Sbjct: 307 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Query: 405 DPWRPAAPAGPSVDPWGGTP---APAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P P PA + +P TP AP A + P P P+ + P PAP
Sbjct: 367 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP---------TTPKEPAPTTPKEPAPTT 417
Query: 462 S-DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
+ +P +P +P+ T +A EP PT+ SA +
Sbjct: 418 TKEPSPTTPKEPAPTTTKSAPTTTKEP------------APTTTKSAPTTPKEPSPTTTK 465
Query: 521 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT 580
P + + P P P P T K P P + P PT
Sbjct: 466 EPAP---TTPKEPAPTTPKKPAPTTPKEPAPTTPKEP----APTTTKKPAPTTPKEPAPT 518
Query: 581 PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQL--------------RLSPVPP 626
P K + P P T P P P PA T +L +P P
Sbjct: 519 TP--KETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTP 576
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
AP T P P P P PAP T
Sbjct: 577 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 607
Score = 65.9 bits (159), Expect = 1e-10
Identities = 81/325 (24%), Positives = 106/325 (32%), Gaps = 27/325 (8%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT AP P T +P P PA PAPT P P
Sbjct: 284 TPKEPAPTTTK---SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK 340
Query: 411 APAGPSVDPWGGT----PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP-AFSDPW 465
PA + T PAP + PTP + P+ + P PAP A P
Sbjct: 341 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTT--PKEPAPTTKEPAPTTPKEPAPTAPKKPA 398
Query: 466 GGSPAKPS-TNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+P +P+ T A EP + + T ++ ++ E + +P
Sbjct: 399 PTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT---- 580
+ + P P P P T K P P + +P PT
Sbjct: 459 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----APTTPKEPAPTTTKKPAPTTPKE 514
Query: 581 --PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLR-LSPVPPVPGAP--PTYI 635
P K + P P T P P P PA T +L +P P P P P
Sbjct: 515 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPT 574
Query: 636 SPLGGGPGL---PPMMPPGPPAPNT 657
+P P P P PAP T
Sbjct: 575 TPKAAAPNTPKEPAPTTPKEPAPTT 599
Score = 60.8 bits (146), Expect = 4e-09
Identities = 86/341 (25%), Positives = 113/341 (33%), Gaps = 40/341 (11%)
Query: 331 SKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV---PTAAPTSDPWGGPPV 387
S +ET E++S DLA PT+ P P A P +P P
Sbjct: 213 SAKETQSIEKTSAKDLA---------PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPK 263
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGT---PAPAAGEGP---TPDPWGSSD 441
PA+ P PT P P PA + T PAP + P TP +
Sbjct: 264 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTT 323
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP 501
P + S P TP +P +P KP+ TT T P E + A P
Sbjct: 324 TKEPAPTTTKSAPTTP----KEPAPTTPKKPAP--TTPKEPAPTTPKEPTPTTPKEPA-P 376
Query: 502 TSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFL 561
T+ A + P + + P P T P+P T K P
Sbjct: 377 TTKEPAPTTPKEPAPTAPKKPAP---TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT 433
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAP-----PATLTL 616
+A + P PT + + P P P+ T P +PAP PA T
Sbjct: 434 TKSA-----PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 488
Query: 617 NQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
+ +P P AP T P P P P AP T
Sbjct: 489 KE--PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 527
Score = 59.7 bits (143), Expect = 8e-09
Identities = 80/316 (25%), Positives = 100/316 (31%), Gaps = 48/316 (15%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT PAP P APT+ P P P TP + + P
Sbjct: 487 TPKEPAPTTPK--EPAPTTTKKP--APTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPT 542
Query: 411 APAGPSVDPWGGTP---APAAGEGPTP----DPWGSSDGGVPVSGPSASDPWTPA-PAFS 462
P P+ TP AP E PTP +P ++ + P P TP PA +
Sbjct: 543 TPEKPAPT----TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT 598
Query: 463 DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSP 522
P +P P T G T P L+ PT+ EL +
Sbjct: 599 TPKEPAPTTPKETAPTTPKG--TAPTT------LKEPAPTTPKKPAPKELAPTTTKEPTS 650
Query: 523 GAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
D A +P A TP P TP+ + + P PT P
Sbjct: 651 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG---------TAPTTLKEPAPTTP 701
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
A P GP+ T +PAP P AP T P P
Sbjct: 702 KKPAPKELAPT--TTKGPTSTTSDKPAPTT-------------PKETAPTTPKEPAPTTP 746
Query: 643 GLPPMMPPGPPAPNTN 658
P P P P T+
Sbjct: 747 KKPAPTTPETPPPTTS 762
Score = 48.9 bits (115), Expect = 1e-05
Identities = 81/322 (25%), Positives = 108/322 (33%), Gaps = 63/322 (19%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTA----APTSDPWGGPPVPPAADPWGGPAPTPASGDP 406
T PAPTT P PT APT+ P P P PTP + +
Sbjct: 511 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE 570
Query: 407 WRPAAP--AGPSV--DPWGGTP---APAAGEGPTPDPWGSSDGGVP-------VSGPSAS 452
P P A P+ +P TP AP + P P + P + P+ +
Sbjct: 571 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 630
Query: 453 DPWTPAP------AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-SGS 505
P PAP +P + KP+ TT G T P E + A T G+
Sbjct: 631 TPKKPAPKELAPTTTKEPTSTTCDKPAP--TTPKGTAPTTPKEPAPTTPKEPAPTTPKGT 688
Query: 506 SAGELELLAGEVPAR-SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPN 564
+ L+ A P + +P + +G + P P TP T PT TP+
Sbjct: 689 APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT-TPKETAPT--TPKE----- 740
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL------TLNQ 618
P PT P K P P P T V+ P P T+ + +
Sbjct: 741 ------------PAPTTP--KKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 786
Query: 619 LRLSPVPPV-------PGAPPT 633
L P P PG P T
Sbjct: 787 LSAEPTPKALENSPKEPGVPTT 808
Score = 46.6 bits (109), Expect = 7e-05
Identities = 67/269 (24%), Positives = 92/269 (34%), Gaps = 25/269 (9%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T P PTT PAP AAP + P P P P P + P
Sbjct: 559 TPEEPTPTTPE--EPAPTTP--KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 614
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS---------GPSASDPWTP-APA 460
P G + PAP + P P + P S P + P TP PA
Sbjct: 615 TPKGTAPTTL-KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 673
Query: 461 FSDPWGGSPAKP-STNGTTAAGGFDTEPDEFSDFDRLRTAL--PTSGSSAGELELLAGEV 517
+ P +P P T TT T P + + + T PTS +S E
Sbjct: 674 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 733
Query: 518 PARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESF-LGPNAALVDLDSLVSR 576
+P + + +PPP + TP T K P + P+ + +L +
Sbjct: 734 APTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA---- 789
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNP 605
PTP A ++P PG P+ T P
Sbjct: 790 -EPTPK-ALENSPKEPGVPTTKTPAATKP 816
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 67.4 bits (163), Expect = 4e-11
Identities = 86/331 (25%), Positives = 107/331 (32%), Gaps = 54/331 (16%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPT---AAPTSDPWGGPPVP--PAADPWGGPAPT-PASG 404
T PAPTT P PT +APT+ P P PA PAPT P
Sbjct: 359 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Query: 405 DPWRPAAPAGPSVDPWGGTP---APAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P P PA + +P TP AP A + P P P+ + P PAP
Sbjct: 419 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP---------TTPKEPAPTTPKEPAPTT 469
Query: 462 S-DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
+ +P +P +P+ T +A EP PT+ SA +
Sbjct: 470 TKEPSPTTPKEPAPTTTKSAPTTTKEP------------APTTTKSAPTTPKEPSPTTTK 517
Query: 521 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT 580
P + + P P P P T K P P + P PT
Sbjct: 518 EPAP---TTPKEPAPTTPKKPAPTTPKEPAPTTPKEP----APTTTKKPAPTTPKEPAPT 570
Query: 581 PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQL--------------RLSPVPP 626
P K + P P T P P P PA T +L +P P
Sbjct: 571 TP--KETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTP 628
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
AP T P P P P PAP T
Sbjct: 629 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 659
Score = 65.9 bits (159), Expect = 1e-10
Identities = 81/325 (24%), Positives = 106/325 (32%), Gaps = 27/325 (8%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT AP P T +P P PA PAPT P P
Sbjct: 336 TPKEPAPTTTK---SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK 392
Query: 411 APAGPSVDPWGGT----PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP-AFSDPW 465
PA + T PAP + PTP + P+ + P PAP A P
Sbjct: 393 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTT--PKEPAPTTKEPAPTTPKEPAPTAPKKPA 450
Query: 466 GGSPAKPS-TNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+P +P+ T A EP + + T ++ ++ E + +P
Sbjct: 451 PTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 510
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT---- 580
+ + P P P P T K P P + +P PT
Sbjct: 511 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----APTTPKEPAPTTTKKPAPTTPKE 566
Query: 581 --PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLR-LSPVPPVPGAP--PTYI 635
P K + P P T P P P PA T +L +P P P P P
Sbjct: 567 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPT 626
Query: 636 SPLGGGPGL---PPMMPPGPPAPNT 657
+P P P P PAP T
Sbjct: 627 TPKAAAPNTPKEPAPTTPKEPAPTT 651
Score = 60.8 bits (146), Expect = 4e-09
Identities = 86/341 (25%), Positives = 113/341 (33%), Gaps = 40/341 (11%)
Query: 331 SKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV---PTAAPTSDPWGGPPV 387
S +ET E++S DLA PT+ P P A P +P P
Sbjct: 265 SAKETQSIEKTSAKDLA---------PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPK 315
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGT---PAPAAGEGP---TPDPWGSSD 441
PA+ P PT P P PA + T PAP + P TP +
Sbjct: 316 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTT 375
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP 501
P + S P TP +P +P KP+ TT T P E + A P
Sbjct: 376 TKEPAPTTTKSAPTTP----KEPAPTTPKKPAP--TTPKEPAPTTPKEPTPTTPKEPA-P 428
Query: 502 TSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFL 561
T+ A + P + + P P T P+P T K P
Sbjct: 429 TTKEPAPTTPKEPAPTAPKKPAP---TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT 485
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAP-----PATLTL 616
+A + P PT + + P P P+ T P +PAP PA T
Sbjct: 486 TKSA-----PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 540
Query: 617 NQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
+ +P P AP T P P P P AP T
Sbjct: 541 KE--PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 579
Score = 59.7 bits (143), Expect = 8e-09
Identities = 80/316 (25%), Positives = 100/316 (31%), Gaps = 48/316 (15%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT PAP P APT+ P P P TP + + P
Sbjct: 539 TPKEPAPTTPK--EPAPTTTKKP--APTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPT 594
Query: 411 APAGPSVDPWGGTP---APAAGEGPTP----DPWGSSDGGVPVSGPSASDPWTPA-PAFS 462
P P+ TP AP E PTP +P ++ + P P TP PA +
Sbjct: 595 TPEKPAPT----TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT 650
Query: 463 DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSP 522
P +P P T G T P L+ PT+ EL +
Sbjct: 651 TPKEPAPTTPKETAPTTPKG--TAPTT------LKEPAPTTPKKPAPKELAPTTTKEPTS 702
Query: 523 GAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
D A +P A TP P TP+ + + P PT P
Sbjct: 703 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG---------TAPTTLKEPAPTTP 753
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
A P GP+ T +PAP P AP T P P
Sbjct: 754 KKPAPKELAPT--TTKGPTSTTSDKPAPTT-------------PKETAPTTPKEPAPTTP 798
Query: 643 GLPPMMPPGPPAPNTN 658
P P P P T+
Sbjct: 799 KKPAPTTPETPPPTTS 814
Score = 48.9 bits (115), Expect = 1e-05
Identities = 81/322 (25%), Positives = 108/322 (33%), Gaps = 63/322 (19%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTA----APTSDPWGGPPVPPAADPWGGPAPTPASGDP 406
T PAPTT P PT APT+ P P P PTP + +
Sbjct: 563 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE 622
Query: 407 WRPAAP--AGPSV--DPWGGTP---APAAGEGPTPDPWGSSDGGVP-------VSGPSAS 452
P P A P+ +P TP AP + P P + P + P+ +
Sbjct: 623 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 682
Query: 453 DPWTPAP------AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-SGS 505
P PAP +P + KP+ TT G T P E + A T G+
Sbjct: 683 TPKKPAPKELAPTTTKEPTSTTCDKPAP--TTPKGTAPTTPKEPAPTTPKEPAPTTPKGT 740
Query: 506 SAGELELLAGEVPAR-SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPN 564
+ L+ A P + +P + +G + P P TP T PT TP+
Sbjct: 741 APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT-TPKETAPT--TPKE----- 792
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL------TLNQ 618
P PT P K P P P T V+ P P T+ + +
Sbjct: 793 ------------PAPTTP--KKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 838
Query: 619 LRLSPVPPV-------PGAPPT 633
L P P PG P T
Sbjct: 839 LSAEPTPKALENSPKEPGVPTT 860
Score = 46.6 bits (109), Expect = 7e-05
Identities = 67/269 (24%), Positives = 92/269 (34%), Gaps = 25/269 (9%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T P PTT PAP AAP + P P P P P + P
Sbjct: 611 TPEEPTPTTPE--EPAPTTP--KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 666
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS---------GPSASDPWTP-APA 460
P G + PAP + P P + P S P + P TP PA
Sbjct: 667 TPKGTAPTTL-KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 725
Query: 461 FSDPWGGSPAKP-STNGTTAAGGFDTEPDEFSDFDRLRTAL--PTSGSSAGELELLAGEV 517
+ P +P P T TT T P + + + T PTS +S E
Sbjct: 726 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 785
Query: 518 PARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESF-LGPNAALVDLDSLVSR 576
+P + + +PPP + TP T K P + P+ + +L +
Sbjct: 786 APTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA---- 841
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNP 605
PTP A ++P PG P+ T P
Sbjct: 842 -EPTPK-ALENSPKEPGVPTTKTPAATKP 868
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 67.4 bits (163), Expect = 4e-11
Identities = 86/331 (25%), Positives = 107/331 (32%), Gaps = 54/331 (16%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPT---AAPTSDPWGGPPVP--PAADPWGGPAPT-PASG 404
T PAPTT P PT +APT+ P P PA PAPT P
Sbjct: 400 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Query: 405 DPWRPAAPAGPSVDPWGGTP---APAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAF 461
P P PA + +P TP AP A + P P P+ + P PAP
Sbjct: 460 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP---------TTPKEPAPTTPKEPAPTT 510
Query: 462 S-DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPAR 520
+ +P +P +P+ T +A EP PT+ SA +
Sbjct: 511 TKEPSPTTPKEPAPTTTKSAPTTTKEP------------APTTTKSAPTTPKEPSPTTTK 558
Query: 521 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT 580
P + + P P P P T K P P + P PT
Sbjct: 559 EPAP---TTPKEPAPTTPKKPAPTTPKEPAPTTPKEP----APTTTKKPAPTTPKEPAPT 611
Query: 581 PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQL--------------RLSPVPP 626
P K + P P T P P P PA T +L +P P
Sbjct: 612 TP--KETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTP 669
Query: 627 VPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
AP T P P P P PAP T
Sbjct: 670 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 700
Score = 65.9 bits (159), Expect = 1e-10
Identities = 81/325 (24%), Positives = 106/325 (32%), Gaps = 27/325 (8%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT AP P T +P P PA PAPT P P
Sbjct: 377 TPKEPAPTTTK---SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPK 433
Query: 411 APAGPSVDPWGGT----PAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAP-AFSDPW 465
PA + T PAP + PTP + P+ + P PAP A P
Sbjct: 434 EPAPTTPKKPAPTTPKEPAPTTPKEPTPTT--PKEPAPTTKEPAPTTPKEPAPTAPKKPA 491
Query: 466 GGSPAKPS-TNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGA 524
+P +P+ T A EP + + T ++ ++ E + +P
Sbjct: 492 PTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Query: 525 FDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPT---- 580
+ + P P P P T K P P + +P PT
Sbjct: 552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP----APTTPKEPAPTTTKKPAPTTPKE 607
Query: 581 --PPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLR-LSPVPPVPGAP--PTYI 635
P K + P P T P P P PA T +L +P P P P P
Sbjct: 608 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPT 667
Query: 636 SPLGGGPGL---PPMMPPGPPAPNT 657
+P P P P PAP T
Sbjct: 668 TPKAAAPNTPKEPAPTTPKEPAPTT 692
Score = 60.8 bits (146), Expect = 4e-09
Identities = 86/341 (25%), Positives = 113/341 (33%), Gaps = 40/341 (11%)
Query: 331 SKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAV---PTAAPTSDPWGGPPV 387
S +ET E++S DLA PT+ P P A P +P P
Sbjct: 306 SAKETQSIEKTSAKDLA---------PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPK 356
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGT---PAPAAGEGP---TPDPWGSSD 441
PA+ P PT P P PA + T PAP + P TP +
Sbjct: 357 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTT 416
Query: 442 GGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALP 501
P + S P TP +P +P KP+ TT T P E + A P
Sbjct: 417 TKEPAPTTTKSAPTTP----KEPAPTTPKKPAP--TTPKEPAPTTPKEPTPTTPKEPA-P 469
Query: 502 TSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFL 561
T+ A + P + + P P T P+P T K P
Sbjct: 470 TTKEPAPTTPKEPAPTAPKKPAP---TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT 526
Query: 562 GPNAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAP-----PATLTL 616
+A + P PT + + P P P+ T P +PAP PA T
Sbjct: 527 TKSA-----PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 581
Query: 617 NQLRLSPVPPVPGAPPTYISPLGGGPGLPPMMPPGPPAPNT 657
+ +P P AP T P P P P AP T
Sbjct: 582 KE--PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 620
Score = 59.7 bits (143), Expect = 8e-09
Identities = 80/316 (25%), Positives = 100/316 (31%), Gaps = 48/316 (15%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T PAPTT PAP P APT+ P P P TP + + P
Sbjct: 580 TPKEPAPTTPK--EPAPTTTKKP--APTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPT 635
Query: 411 APAGPSVDPWGGTP---APAAGEGPTP----DPWGSSDGGVPVSGPSASDPWTPA-PAFS 462
P P+ TP AP E PTP +P ++ + P P TP PA +
Sbjct: 636 TPEKPAPT----TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT 691
Query: 463 DPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSP 522
P +P P T G T P L+ PT+ EL +
Sbjct: 692 TPKEPAPTTPKETAPTTPKG--TAPTT------LKEPAPTTPKKPAPKELAPTTTKEPTS 743
Query: 523 GAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPP 582
D A +P A TP P TP+ + + P PT P
Sbjct: 744 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG---------TAPTTLKEPAPTTP 794
Query: 583 GAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGGGP 642
A P GP+ T +PAP P AP T P P
Sbjct: 795 KKPAPKELAPT--TTKGPTSTTSDKPAPTT-------------PKETAPTTPKEPAPTTP 839
Query: 643 GLPPMMPPGPPAPNTN 658
P P P P T+
Sbjct: 840 KKPAPTTPETPPPTTS 855
Score = 48.9 bits (115), Expect = 1e-05
Identities = 81/322 (25%), Positives = 108/322 (33%), Gaps = 63/322 (19%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTA----APTSDPWGGPPVPPAADPWGGPAPTPASGDP 406
T PAPTT P PT APT+ P P P PTP + +
Sbjct: 604 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEE 663
Query: 407 WRPAAP--AGPSV--DPWGGTP---APAAGEGPTPDPWGSSDGGVP-------VSGPSAS 452
P P A P+ +P TP AP + P P + P + P+ +
Sbjct: 664 PAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPT 723
Query: 453 DPWTPAP------AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPT-SGS 505
P PAP +P + KP+ TT G T P E + A T G+
Sbjct: 724 TPKKPAPKELAPTTTKEPTSTTCDKPAP--TTPKGTAPTTPKEPAPTTPKEPAPTTPKGT 781
Query: 506 SAGELELLAGEVPAR-SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPN 564
+ L+ A P + +P + +G + P P TP T PT TP+
Sbjct: 782 APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT-TPKETAPT--TPKE----- 833
Query: 565 AALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATL------TLNQ 618
P PT P K P P P T V+ P P T+ + +
Sbjct: 834 ------------PAPTTP--KKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPE 879
Query: 619 LRLSPVPPV-------PGAPPT 633
L P P PG P T
Sbjct: 880 LSAEPTPKALENSPKEPGVPTT 901
Score = 46.6 bits (109), Expect = 7e-05
Identities = 67/269 (24%), Positives = 92/269 (34%), Gaps = 25/269 (9%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPA 410
T P PTT PAP AAP + P P P P P + P
Sbjct: 652 TPEEPTPTTPE--EPAPTTP--KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 707
Query: 411 APAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVS---------GPSASDPWTP-APA 460
P G + PAP + P P + P S P + P TP PA
Sbjct: 708 TPKGTAPTTL-KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPA 766
Query: 461 FSDPWGGSPAKP-STNGTTAAGGFDTEPDEFSDFDRLRTAL--PTSGSSAGELELLAGEV 517
+ P +P P T TT T P + + + T PTS +S E
Sbjct: 767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Query: 518 PARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESF-LGPNAALVDLDSLVSR 576
+P + + +PPP + TP T K P + P+ + +L +
Sbjct: 827 APTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA---- 882
Query: 577 PGPTPPGAKASNPFLPGGGPATGPSVTNP 605
PTP A ++P PG P+ T P
Sbjct: 883 -EPTPK-ALENSPKEPGVPTTKTPAATKP 909
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 67.4 bits (163), Expect = 4e-11
Identities = 84/308 (27%), Positives = 100/308 (32%), Gaps = 45/308 (14%)
Query: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPW 420
P GG P P P P G P P G P P GD R +P P P
Sbjct: 62 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR--SPRSPPGKPQ 119
Query: 421 GGTPAPAAG---EGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGT 477
G P P G +GP P P G G P G P P G P P G
Sbjct: 120 G--PPPQGGNQPQGPPPPP-GKPQGPPPQGGNKPQGPPPP---------GKPQGPPPQGD 167
Query: 478 TAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEA 537
+ + P + + P G+ + P PG +G
Sbjct: 168 NKSRSSRSPPG------KPQGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG--NK 211
Query: 538 VGSPPPAATPTPTPPT--RKTPESFLGPNAALVDLDSLVSRP-GPTPPGAKASNPFLPGG 594
PPP P PP K+ + P ++P GP PP K P GG
Sbjct: 212 PQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 271
Query: 595 GPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYISPLGG----GPGLPPMMPP 650
GP Q PP + ++ SP P P PP P GG GP PP P
Sbjct: 272 NKPQGPPPPGKPQGPPPQGGSKSRSSRSP-PGKPQGPP----PQGGNQPQGPPPPPGKPQ 326
Query: 651 GPPAPNTN 658
GPP N
Sbjct: 327 GPPPQGGN 334
Score = 63.2 bits (152), Expect = 8e-10
Identities = 82/318 (25%), Positives = 96/318 (30%), Gaps = 59/318 (18%)
Query: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWR------PAAPAG 414
P GG P P P P G P P G P P GD P P G
Sbjct: 123 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182
Query: 415 PSVD----PWGGTPAPAAGEGPTPD----PWGSSDGGVPVSGPSASD------------P 454
P P G P P +GP P P G G P P D P
Sbjct: 183 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKP 242
Query: 455 WTPAP-AFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTSGSSAGELELL 513
P P + P G P G GG +P + + P GS +
Sbjct: 243 QGPPPQGGNQPQGPPPPPGKPQGPPPQGG--NKPQGPPPPGKPQGPPPQGGSKSRS---- 296
Query: 514 AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSL 573
+RSP + G PPP P PP G N
Sbjct: 297 -----SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ--------GGNKP------- 336
Query: 574 VSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPT 633
GP PPG P P GG + + + P +P P N + P PP G P
Sbjct: 337 ---QGPPPPGKPQGPP--PQGGSKSRSARSPPGKPQGPPQQEGNNPQ-GPPPPAGGNPQQ 390
Query: 634 YISPLGGGPGLPPMMPPG 651
+P G P PP P G
Sbjct: 391 PQAPPAGQPQGPPRPPQG 408
Score = 60.5 bits (145), Expect = 5e-09
Identities = 73/279 (26%), Positives = 80/279 (28%), Gaps = 50/279 (17%)
Query: 388 PPAADPWGGPAPTPASGDPWRPAAPAGPSVD----PWGGTPAPAAGEGPTPDPWGSSDGG 443
P A P GG P G P P P GP P G P P +GP P G
Sbjct: 36 PQGAPPQGGNKP---QGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 92
Query: 444 VPVSGPSASDPWTPAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFDRLRTALPTS 503
P P P G P P G G P + P
Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK-------PQGPPPQ 145
Query: 504 GSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGP 563
G + + G P PG +G PP P P P+
Sbjct: 146 GGNKPQ-----GPPP---PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ----- 192
Query: 564 NAALVDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSP 623
GP PP K P GG GP Q PP +Q SP
Sbjct: 193 --------------GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP 238
Query: 624 VPPVPGAPPTYISPLGG----GPGLPPMMPPGPPAPNTN 658
P P PP P GG GP PP P GPP N
Sbjct: 239 -PGKPQGPP----PQGGNQPQGPPPPPGKPQGPPPQGGN 272
Score = 41.2 bits (95), Expect = 0.003
Identities = 42/163 (25%), Positives = 52/163 (31%), Gaps = 24/163 (14%)
Query: 330 ESKRETGGKEESSLMDLADVFTAPAPAPTTD----PWGGPAPMAAAVPTAAPTSDPWGG- 384
+S R GK + + P P P P GG P P P GG
Sbjct: 233 QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGS 292
Query: 385 --------PPVPPAADPWGGPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDP 436
P P P GG P P +P P + G P P +GP P
Sbjct: 293 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 352
Query: 437 WGSSDG-----GVPVSGP--SASDPWTPAPAFSDPWGGSPAKP 472
S G P P ++P P P P GG+P +P
Sbjct: 353 GSKSRSARSPPGKPQGPPQQEGNNPQGPPP----PAGGNPQQP 391
Score = 39.3 bits (90), Expect = 0.012
Identities = 34/118 (28%), Positives = 38/118 (32%), Gaps = 21/118 (17%)
Query: 355 PAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAG 414
P P GP P P P P G P PP P GG A P +P P
Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPP---PPGKPQGPP---PQGGSKSRSARSPPGKPQGPPQ 371
Query: 415 PSVDPWGGTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKP 472
+ G P PA G P P A P P P GG P++P
Sbjct: 372 QEGNNPQGPPPPAGGNPQQP------------QAPPAGQPQGPP---RPPQGGRPSRP 414
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 67.0 bits (162), Expect = 5e-11
Identities = 79/286 (27%), Positives = 105/286 (36%), Gaps = 31/286 (10%)
Query: 383 GGPPVPPAADPWGGPAPTPASGDPWRPAAPAG----PSVDPWGGTPAPAAGEGPTPD-PW 437
G PVP + GPA TP + P RPAAPA PS+ + P GP+ P+
Sbjct: 321 GEAPVPASVGSTSGPATTPLASAP-RPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPY 379
Query: 438 GSSDGGVPVSGPSASDPWT---PAPAFSDPWGGSPAKPSTNGTTAAGGFDTEPDEFSDFD 494
GG P G P + P P+ + GG P + + NG P +
Sbjct: 380 HGMHGGGP--GGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW-MQPPPPPMNQGP 436
Query: 495 RLRTALPTSGSSAGELELLAGEVPARSPGAFDMSGVRGSLAEAVGSPPPAAT--PTPTPP 552
P ++ G P S G + + +G + PPP P P PP
Sbjct: 437 H-----PPGHHGPPPMDQYLGSTPVGS-GVYRLHQGKGMMP-----PPPMGMMPPPPPPP 485
Query: 553 TRKTPESFLGPNAALVDLDSLVSRPGPTPP--GAKASNPFLPGGGPATGPSVTNPFQPAP 610
+ + P GP L +P P PP + AS+ LP T + + P
Sbjct: 486 SGQPPPPPSGP---LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIP 542
Query: 611 PATLTLNQLRLSP-VPPVPGAPPTYISPLGGGPGLPPMMPPGPPAP 655
P SP P + G P P G P LPP PP PP P
Sbjct: 543 PWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPP 588
Score = 45.1 bits (105), Expect = 2e-04
Identities = 92/356 (25%), Positives = 110/356 (30%), Gaps = 108/356 (30%)
Query: 338 KEESSLMDLADVFTAPAPAPTTDPWGGPA--PMAAAVPTAAPTSDP-------------- 381
KE SLM A++ AP PA + GPA P+A+A AAP ++P
Sbjct: 311 KEYLSLM--AELGEAPVPA-SVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPP 367
Query: 382 W---------------GGPPVPPAADPWGGPAPTPA-----SGDPWRPAAPAGPSVDPWG 421
W GG P P P P P P+ G P + P GP PW
Sbjct: 368 WMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQ-HNPNGPP-PPWM 425
Query: 422 GTPAPAAGEGP------TPDPWGSSDGGVPV----------SGPSASDPWTPAPAFSDPW 465
P P +GP P P G PV G P P P
Sbjct: 426 QPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPP 485
Query: 466 GGSPAKPSTNGTTAAGGFDTE---PDEFSDFDRLRTALP------TSGSSAGELELLAGE 516
G P P + + P S T LP T+ +SAG G
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAG-----TGS 540
Query: 517 VP---------ARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAAL 567
+P A SPGA M G + G PP P PP
Sbjct: 541 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP--------------- 585
Query: 568 VDLDSLVSRPGPTPPGAKASNPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSP 623
P PP A P GG GPS + P P TL Q + P
Sbjct: 586 -----------PPPPPGSAGMMIPPRGG--DGPSHESEDFPRPLVTLPGRQPQQRP 628
Score = 32.7 bits (73), Expect = 1.1
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 351 TAPAPAPTTDPWGGPAPMAAAVPTAA-----PTS---DPWGGPPVPPAADPWGGPAPTPA 402
T A + PW AAA P A PT P PP+PP A P P P +
Sbjct: 533 TTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGS 592
Query: 403 SGDPWRPAAPAGPSVDPWGGTPAPAA---GEGPTPDPW 437
+G P GPS + P P G P PW
Sbjct: 593 AGMMIPPRGGDGPSHES-EDFPRPLVTLPGRQPQQRPW 629
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,795,620
Number of Sequences: 37866
Number of extensions: 2745038
Number of successful extensions: 36259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 1866
Number of HSP's that attempted gapping in prelim test: 14652
Number of HSP's gapped (non-prelim): 12456
length of query: 662
length of database: 18,247,518
effective HSP length: 109
effective length of query: 553
effective length of database: 14,120,124
effective search space: 7808428572
effective search space used: 7808428572
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.