Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF449 Sequence: fasta or formatted (518aa) NCBI GI: 194239638
Description:

zinc finger protein 449

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         21           2
 C cysteine            4.2         22           2
 D aspartate           2.9         15           1
 E glutamate          10.8         56           3
 F phenylalanine       3.7         19           1
 G glycine             5.6         29           1
 H histidine           5.2         27           1
 I isoleucine          3.7         19           1
 K lysine              6.9         36           3
 L leucine            10.0         52           2
 M methionine          2.1         11           1
 N asparagine          3.1         16           1
 P proline             7.1         37           2
 Q glutamine           6.8         35           2
 R arginine            6.4         33           2
 S serine              5.0         26           2
 T threonine           5.6         29           1
 V valine              3.5         18           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 449 
ZNF167                0.302   zinc finger protein 167 isoform 1 
ZSCAN21               0.297   zinc finger protein 38 
ZNF263                0.277   zinc finger protein 263 
ZNF436                0.220   zinc finger protein 436 
ZNF436                0.220   zinc finger protein 436 
ZNF568                0.219   zinc finger protein 568 
ZFP37                 0.218   zinc finger protein 37 homolog 
ZNF79                 0.218   zinc finger protein 79 
ZNF569                0.218   zinc finger protein 569 
ZNF774                0.216   zinc finger protein 774 
ZNF180                0.216   zinc finger protein 180 
ZNF182                0.216   zinc finger protein 21 isoform 2 
ZNF182                0.216   zinc finger protein 21 isoform 1 
LOC100287429          0.213   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.213   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.213   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.213   zinc finger protein 84 
ZNF84                 0.213   zinc finger protein 84 
ZNF25                 0.213   zinc finger protein 25 
ZFP2                  0.213   zinc finger protein 2 homolog 
ZNF544                0.212   zinc finger protein 544 
ZNF420                0.211   zinc finger protein 420 
ZSCAN2                0.211   zinc finger protein 29 isoform 1 
ZNF782                0.210   zinc finger protein 782 
ZNF554                0.210   zinc finger protein 554 
LOC344065             0.210   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.210   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.210   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF33B                0.210   zinc finger protein 33B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press