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Search of human proteins with 194097354
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194097354 G1 to S phase transition 1 isoform 2 [Homo
sapiens]
(636 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 1301 0.0
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 1296 0.0
gi|46094014 peptide chain release factor 3 [Homo sapiens] 1102 0.0
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 1014 0.0
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 344 1e-94
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 344 1e-94
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 312 5e-85
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 307 2e-83
gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 273 5e-73
gi|34147630 Tu translation elongation factor, mitochondrial prec... 117 3e-26
gi|82546879 GTP binding protein 1 [Homo sapiens] 75 2e-13
gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens] 73 7e-13
gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens] 73 7e-13
gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens] 72 2e-12
gi|45593140 GTP binding protein 2 [Homo sapiens] 67 4e-11
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 60 8e-09
gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 58 2e-08
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 57 4e-08
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 54 3e-07
gi|53729339 mitochondrial translational initiation factor 2 prec... 52 1e-06
gi|53729337 mitochondrial translational initiation factor 2 prec... 52 1e-06
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 52 2e-06
gi|4503507 eukaryotic translation initiation factor 2, subunit 3... 51 3e-06
gi|194363768 homeobox D9 [Homo sapiens] 49 1e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 49 1e-05
gi|55741677 SET domain containing 1A [Homo sapiens] 47 4e-05
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 47 7e-05
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 46 9e-05
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 1301 bits (3366), Expect = 0.0
Identities = 636/636 (100%), Positives = 636/636 (100%)
Query: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN
Sbjct: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
Query: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV
Sbjct: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
Query: 121 ESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPP 180
ESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPP
Sbjct: 121 ESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPP 180
Query: 181 EESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDK 240
EESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDK
Sbjct: 181 EESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDK 240
Query: 241 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHK 300
RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHK
Sbjct: 241 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHK 300
Query: 301 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 360
SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD
Sbjct: 301 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 360
Query: 361 DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLP 420
DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLP
Sbjct: 361 DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLP 420
Query: 421 FIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEV 480
FIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEV
Sbjct: 421 FIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEV 480
Query: 481 LGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHK 540
LGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHK
Sbjct: 481 LGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHK 540
Query: 541 SIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI 600
SIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI
Sbjct: 541 SIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI 600
Query: 601 CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 636
CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 601 CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 636
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 1296 bits (3354), Expect = 0.0
Identities = 636/637 (99%), Positives = 636/637 (99%), Gaps = 1/637 (0%)
Query: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN
Sbjct: 1 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 60
Query: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV
Sbjct: 61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 120
Query: 121 ESSQEEQSLCEGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 179
ESSQEEQSLCEGSNSAVSMELSEPI ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP
Sbjct: 121 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 180
Query: 180 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 239
PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
Sbjct: 181 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 240
Query: 240 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 299
KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
Sbjct: 241 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 300
Query: 300 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 359
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM
Sbjct: 301 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 360
Query: 360 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 419
DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL
Sbjct: 361 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 420
Query: 420 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 479
PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE
Sbjct: 421 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 480
Query: 480 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 539
VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH
Sbjct: 481 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 540
Query: 540 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 599
KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT
Sbjct: 541 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 600
Query: 600 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 636
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 601 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 637
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 1102 bits (2849), Expect = 0.0
Identities = 552/627 (88%), Positives = 574/627 (91%), Gaps = 10/627 (1%)
Query: 19 SGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVP 78
SGSSSSDSAPDCWDQ DME+PG P G G S +A AEAQRE LS+AFSR+LNVNAKPFVP
Sbjct: 3 SGSSSSDSAPDCWDQVDMESPGSAPSGDGVS-SAVAEAQREPLSSAFSRKLNVNAKPFVP 61
Query: 79 NVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG-------GRAAPVESSQEEQSLC- 130
NVHAAEFVPSFLRGP PP G+ +N +GAG GR APVE S+EE +
Sbjct: 62 NVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVSL 121
Query: 131 EGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME 189
EGSNSAV+MELSEP+ ENGE EM+ EESWEH +E+SEAEPGGGS GD PPEES EMME
Sbjct: 122 EGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMME 181
Query: 190 EEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 249
E+EEI K KSV+ P GAPKKEHVNVVFIGHVDAGKSTIGGQIM+LTGMVDKRTLEKYERE
Sbjct: 182 EKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYERE 241
Query: 250 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG 309
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE+KHFTILDAPGHKSFVPNMIGG
Sbjct: 242 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGG 301
Query: 310 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 369
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWS E
Sbjct: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
Query: 370 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLP 429
RYEECKEKLVPFLKKVGF+PKKDIHFMPCSGLTGAN+KEQSDFCPWY GLPFIPYLDNLP
Sbjct: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLP 421
Query: 430 NFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVE 489
NFNRS+DGPIRLPIVDKYKDMGTVVLGKLESGSI KGQQLVMMPNKHNVEVLGILSDD E
Sbjct: 422 NFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTE 481
Query: 490 TDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNA 549
TD VAPGENLKIRLKGIEEEEILPGFILCDP+NLCHSGRTFD QIVIIEHKSIICPGYNA
Sbjct: 482 TDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNA 541
Query: 550 VLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 609
VLHIHTCIEEVEITALI LVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP
Sbjct: 542 VLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 601
Query: 610 QMGRFTLRDEGKTIAIGKVLKLVPEKD 636
QMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 602 QMGRFTLRDEGKTIAIGKVLKLVPEKD 628
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 1014 bits (2622), Expect = 0.0
Identities = 498/499 (99%), Positives = 498/499 (99%), Gaps = 1/499 (0%)
Query: 139 MELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP 197
MELSEPI ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP
Sbjct: 1 MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP 60
Query: 198 KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET 257
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
Sbjct: 61 KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET 120
Query: 258 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 317
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
Sbjct: 121 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 180
Query: 318 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK 377
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
Sbjct: 181 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK 240
Query: 378 LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG 437
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG
Sbjct: 241 LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG 300
Query: 438 PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE 497
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE
Sbjct: 301 PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE 360
Query: 498 NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI 557
NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
Sbjct: 361 NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI 420
Query: 558 EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 617
EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
Sbjct: 421 EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 480
Query: 618 DEGKTIAIGKVLKLVPEKD 636
DEGKTIAIGKVLKLVPEKD
Sbjct: 481 DEGKTIAIGKVLKLVPEKD 499
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 344 bits (883), Expect = 1e-94
Identities = 196/503 (38%), Positives = 291/503 (57%), Gaps = 22/503 (4%)
Query: 146 ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP-------- 197
ENG + +P++ ++ I+ ++ + PP + EE+ P P
Sbjct: 143 ENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASEEQSSTPAPVKKSGKLR 200
Query: 198 KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK 253
+ + K K+ +N+V IGHVDAGKST+ G ++YL G ++KRT+ KYE+E+K+
Sbjct: 201 QQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKA 260
Query: 254 NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA 313
+ ++ +W LD EER++G T++VG FET K T++DAPGHK F+PNMI GA+QA
Sbjct: 261 GKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQA 320
Query: 314 DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 373
D+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VNW ER++E
Sbjct: 321 DVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VNWQQERFQE 378
Query: 374 CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCPWYIGLPFIPYLDNLPN 430
KL FLK+ GF + D+ F+P SGL+G NL + S+ WY GL + +D+
Sbjct: 379 ITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP 437
Query: 431 FNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDV 488
RS+D P RL + D +KD G+ + GK+E+G I G +L+ MP V GI D
Sbjct: 438 PQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDE 497
Query: 489 ETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYN 548
D A G+++ + L G++ +I G I C P + F A+I+I + I G+
Sbjct: 498 PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFP 557
Query: 549 AVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 608
+LH T E I LI +++K +GE +K +P+F+ + Q + L+T I LE +KDF
Sbjct: 558 VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDF 617
Query: 609 PQMGRFTLRDEGKTIAIGKVLKL 631
++GRF LR G TIA G V ++
Sbjct: 618 KELGRFMLRYGGSTIAAGVVTEI 640
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 344 bits (883), Expect = 1e-94
Identities = 196/503 (38%), Positives = 291/503 (57%), Gaps = 22/503 (4%)
Query: 146 ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP-------- 197
ENG + +P++ ++ I+ ++ + PP + EE+ P P
Sbjct: 185 ENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASEEQSSTPAPVKKSGKLR 242
Query: 198 KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK 253
+ + K K+ +N+V IGHVDAGKST+ G ++YL G ++KRT+ KYE+E+K+
Sbjct: 243 QQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKA 302
Query: 254 NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA 313
+ ++ +W LD EER++G T++VG FET K T++DAPGHK F+PNMI GA+QA
Sbjct: 303 GKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQA 362
Query: 314 DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 373
D+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VNW ER++E
Sbjct: 363 DVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VNWQQERFQE 420
Query: 374 CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCPWYIGLPFIPYLDNLPN 430
KL FLK+ GF + D+ F+P SGL+G NL + S+ WY GL + +D+
Sbjct: 421 ITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP 479
Query: 431 FNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDV 488
RS+D P RL + D +KD G+ + GK+E+G I G +L+ MP V GI D
Sbjct: 480 PQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDE 539
Query: 489 ETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYN 548
D A G+++ + L G++ +I G I C P + F A+I+I + I G+
Sbjct: 540 PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFP 599
Query: 549 AVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 608
+LH T E I LI +++K +GE +K +P+F+ + Q + L+T I LE +KDF
Sbjct: 600 VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDF 659
Query: 609 PQMGRFTLRDEGKTIAIGKVLKL 631
++GRF LR G TIA G V ++
Sbjct: 660 KELGRFMLRYGGSTIAAGVVTEI 682
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 312 bits (800), Expect = 5e-85
Identities = 170/443 (38%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 327
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 328 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 387
E G K GQTREHA+LA T GVK LIV +NKMD +S +RYEE +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGY 183
Query: 388 NPKKDIHFMPCSGLTGANLKEQSDFCPWY------------IGLPFIPYLDNLPNFNRSV 435
NP + F+P SG G N+ E S PW+ G + LD + R
Sbjct: 184 NP-DTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPT 242
Query: 436 DGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTV 493
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 494 APGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLH 552
PG+N+ +K + +++ G + D N+ F AQ++I+ H I GY VL
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 553 IHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 612
HT + L +D++SG+K + P+F+K I + +C+E+F D+P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 613 RFTLRDEGKTIAIGKVLKLVPEK 635
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKAVDKK 444
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 307 bits (786), Expect = 2e-83
Identities = 165/443 (37%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 327
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 328 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 387
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 388 NPKKDIHFMPCSGLTGANLKEQSDFCPWY------------IGLPFIPYLDNLPNFNRSV 435
NP + F+P SG G N+ E S PW+ G+ + LD + R
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPT 242
Query: 436 DGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTV 493
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEA 302
Query: 494 APGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLH 552
PG+N+ +K + ++I G + D ++ F +Q++I+ H I GY+ V+
Sbjct: 303 LPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVID 362
Query: 553 IHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 612
HT + L +D++SG+K + P+ +K I + +C+E+F +P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLG 422
Query: 613 RFTLRDEGKTIAIGKVLKLVPEK 635
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKNVEKK 444
>gi|239757543 PREDICTED: similar to eukaryotic translation
elongation factor 1 alpha 2 [Homo sapiens]
Length = 444
Score = 273 bits (697), Expect = 5e-73
Identities = 154/444 (34%), Positives = 236/444 (53%), Gaps = 34/444 (7%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+N+V IGHVD+GKST G ++Y G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 327
+ ER++G T+++ FET K + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 328 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGF 387
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 388 NPKKDIHFMPCSGLTGANLKEQSDFCPWY--------------------IGLPFIPYLDN 427
NP + F+P SG G N+ E S PW+ I P IP
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGXRLCPRISCPSIPSGPT 242
Query: 428 LPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDD 487
P+ G +GTV +G++E+G + G + P EV +
Sbjct: 243 FPSHPLPSAG------------IGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHH 290
Query: 488 VETDTVAPGENLKIRLKGIEEEEILPGFILCD-PNNLCHSGRTFDAQIVIIEHKSIICPG 546
PG+N+ +K + ++I G + D ++ F +Q++I+ H I G
Sbjct: 291 EALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAG 350
Query: 547 YNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFK 606
Y+ V+ HT + L +D++SG+K + P+ +K I + +C+E+F
Sbjct: 351 YSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFS 410
Query: 607 DFPQMGRFTLRDEGKTIAIGKVLK 630
+P +G E K+ GKV K
Sbjct: 411 QYPPLGEPGWSGEKKSGGAGKVTK 434
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 117 bits (293), Expect = 3e-26
Identities = 97/339 (28%), Positives = 150/339 (44%), Gaps = 44/339 (12%)
Query: 209 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQ 268
K HVNV IGHVD GK+T+ I + +KYE +D
Sbjct: 58 KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEE---------------IDNAP 102
Query: 269 EERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFE 328
EER +G T+ + T +H+ D PGH +V NMI G + D +LV++A G
Sbjct: 103 EERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP 162
Query: 329 TGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE-ECKEKLVPFLKKVGF 387
QTREH +LA+ GV+H++V +NK D + E E E +E L F K
Sbjct: 163 -------QTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEE 215
Query: 388 NPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYL-----DNLPNFNRSVDGPIRLP 442
P + G+ L P +GL + L +P R ++ P LP
Sbjct: 216 TPV----------IVGSALCALEGRDP-ELGLKSVQKLLDAVDTYIPVPARDLEKPFLLP 264
Query: 443 IVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNKHNVE--VLGILSDDVETDTVAPGEN 498
+ Y GTVV G LE G + KG + ++ + N+ V GI + G+N
Sbjct: 265 VEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFHKSLERAEAGDN 324
Query: 499 LKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVII 537
L ++G++ E++ G ++ P ++ + +AQ+ I+
Sbjct: 325 LGALVRGLKREDLRRGLVMVKPGSI-KPHQKVEAQVYIL 362
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 74.7 bits (182), Expect = 2e-13
Identities = 113/471 (23%), Positives = 187/471 (39%), Gaps = 88/471 (18%)
Query: 212 VNVVFIGHVDAGKSTIGGQIMYLTGMVD------KRTLEKYEREAKEKNRETWYLSWALD 265
V V +G+VDAGKST+ G + + G +D ++ L +++ E E R + + L
Sbjct: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEI-ESGRTSSVGNDILG 217
Query: 266 TNQEERDKGKTVEVGRAY-----FETEKKHFTILDAPGHKSFVPNMIGGASQ--ADLAVL 318
+ E K G + E K T +D GH+ ++ + G + D +L
Sbjct: 218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
Query: 319 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKL 378
++ + G G T+EH LA V + V++ K+D N E + + L
Sbjct: 278 MVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKLLQRLL 329
Query: 379 V-PFLKKV---------------GFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 422
P +K+ F+ ++ S +TG NL D ++ L
Sbjct: 330 KSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL----DLLKMFLNLLS- 384
Query: 423 PYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMP----NKH 476
P + + P I D Y +GTVV G G I L++ P N
Sbjct: 385 ------PRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFL 438
Query: 477 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 536
++ V I + V G+ LK I+ I G ++ P + F+A+I++
Sbjct: 439 SIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498
Query: 537 IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK---KSGEKSKTRPRFVKQ------D 587
+ H + I P Y A++H + + TA I +DK ++G+K+ RF+K D
Sbjct: 499 LHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHID 554
Query: 588 QVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFTLRDEG 620
Q + R + GTI L+T + P + G T RDEG
Sbjct: 555 QRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEG 605
>gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 73.2 bits (178), Expect = 7e-13
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 310 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 369
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 370 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 408
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 73.2 bits (178), Expect = 7e-13
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 310 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 369
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 370 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 408
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 71.6 bits (174), Expect = 2e-12
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 310 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 369
+ + D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S+
Sbjct: 44 SGREDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 370 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 408
+EE +++ ++KK+ +N + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|45593140 GTP binding protein 2 [Homo sapiens]
Length = 602
Score = 67.4 bits (163), Expect = 4e-11
Identities = 120/564 (21%), Positives = 210/564 (37%), Gaps = 91/564 (16%)
Query: 98 PPAGGAANNHGAGSGAG------------GRAAPVESSQEEQSLCEGSNSAVSMELSEPI 145
P GG GAGS +G R + E N ++L P
Sbjct: 19 PAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPS 78
Query: 146 ENGETEMSPEESWEHKEEISEA------EPGGGSLG----DGRPPEESAHEMMEE----- 190
+ + + W +E EA E G +G + R ++ H M E+
Sbjct: 79 QYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADI 138
Query: 191 ----------EEEIPKPKSVVAPPGAPKKEH---VNVVFIGHVDAGKSTIGGQIMYLTGM 237
+ ++P+ + V P + + V +G+VD+GKST+ G + G
Sbjct: 139 TVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ--GE 196
Query: 238 VD----KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETEK 288
+D + L + + ++ T +S+ + KG+ V E+
Sbjct: 197 LDNGRGRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSS 253
Query: 289 KHFTILDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKT 346
K T +D GH ++ I G + D A+L++SA G G TREH LA
Sbjct: 254 KMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALA 306
Query: 347 AGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL 406
V IV ++K+D + E +L LK+ G + + +T A
Sbjct: 307 LKVPFFIV-VSKID----LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQ 361
Query: 407 KEQSDFCPWYIGLPFIP---------YLDNLPNFNRSVDGPIRLPIVDKYK--------D 449
QS L + +L+ LP S + + + +++ +
Sbjct: 362 FAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPE 421
Query: 450 MGTVVLGKLESGSICKGQQLVMMPNKHN----VEVLGILSDDVETDTVAPGENLKIRLKG 505
+GTVV G L SG +G QLV+ P + V I + + G+ + L
Sbjct: 422 VGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGD 481
Query: 506 IEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITAL 565
+ + G ++ P F+A+IV++ H + G+ +H+ + + +
Sbjct: 482 FDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEK 540
Query: 566 ICLVDK-KSGEKSKTRPRFVKQDQ 588
I DK ++GEK+ R RF+K +
Sbjct: 541 IHAKDKLRTGEKAVVRFRFLKHPE 564
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 59.7 bits (143), Expect = 8e-09
Identities = 96/405 (23%), Positives = 150/405 (37%), Gaps = 85/405 (20%)
Query: 2 DPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENL 61
D GS G G G GSSS SSS S G G + +E++ +
Sbjct: 23 DSGSASGSGSGSSSGSSSDGSSSQS-------------GSSDSDSGSESGSQSESESDT- 68
Query: 62 SAAFSRQLNVNAKPFVPNVHAAEF---VPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAA 118
SR+ V AKP P V AEF PS L A R+A
Sbjct: 69 ----SRENKVQAKP--PKVDGAEFWKSSPSIL----------------------AVQRSA 100
Query: 119 PV--ESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGG---S 173
+ + Q++Q + S+++ S E S E+ + S + +HK+E + G S
Sbjct: 101 ILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQS 160
Query: 174 LGDGRPPEESAHEMMEEEEEIPKPKSVV---APPGAPKKEHVNVVFIGHVDAGKSTIGGQ 230
D EE +E E +PK+ V P K ++ GK +G +
Sbjct: 161 GSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKN-----------GKKILGQK 209
Query: 231 IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEV-GRAYFETEKK 289
+ + E Y+ + + R+ + + + D +EV G + E++
Sbjct: 210 KRQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEE 269
Query: 290 HFTILDAPGHKSFVPNMIG--GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA 347
F ++ F+ IG GA+ A + + A G+ GFEK + E L K
Sbjct: 270 EFETIE-----RFMDCRIGRKGATGATTTIYAVEA-DGDPNAGFEKNKEPGEIQYLIKWK 323
Query: 348 GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKD 392
G H+ W E E K++ V +KK+ KKD
Sbjct: 324 GWSHI----------HNTWETE--ETLKQQNVRGMKKLDNYKKKD 356
>gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTIL 294
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTIL 294
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 208 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 267
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 268 QEERDKGKTVEVGRAYFETEKKHFTIL 294
+ E + G T+++ FET K+ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 57.4 bits (137), Expect = 4e-08
Identities = 85/362 (23%), Positives = 142/362 (39%), Gaps = 72/362 (19%)
Query: 206 APKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALD 265
A ++ +VNV +GH+D+GK+ + + T + A D
Sbjct: 2 AGRRVNVNVGVLGHIDSGKTALARAL------------------------STTASTAAFD 37
Query: 266 TNQEERDKGKTVEVGRAYF-------------------ETEKK------HFTILDAPGHK 300
+ R++G T+++G + F E E + T++D PGH
Sbjct: 38 KQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHA 97
Query: 301 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 360
S + +IGGA DL +LVI KG +T Q+ E ++ + A K L+V++NK+D
Sbjct: 98 SLIRTIIGGAQIIDLMMLVIDVTKG-MQT------QSAECLVIGQIACQK-LVVVLNKID 149
Query: 361 DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL- 419
++ +K+ L+ F I G A E P I L
Sbjct: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGIPELIELL 209
Query: 420 ---PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH 476
IP D F SVD + K GTV+ G + SGSI G + + K
Sbjct: 210 TSQISIPTRDPSGPFLMSVDHCFSI------KGQGTVMTGTILSGSISLGDSVEIPALKV 263
Query: 477 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 536
+V + + + G+ L I + + ++L ++C P +L T A ++
Sbjct: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQF-DPKLLERGLVCAPESL----HTVHAALIS 318
Query: 537 IE 538
+E
Sbjct: 319 VE 320
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 54.3 bits (129), Expect = 3e-07
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 33/206 (16%)
Query: 177 GRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG 236
G PE A + + E K + P + N + HVD GKST+ +++ LTG
Sbjct: 37 GAAPESWATDRLYSSAEF---KEKLDMSRFPVENIRNFSIVAHVDHGKSTLADRLLELTG 93
Query: 237 MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRA--YFETEKKHF--T 292
+DK K LD Q ER++G TV+ A ++ E K +
Sbjct: 94 TIDKTKNNKQ----------------VLDKLQVERERGITVKAQTASLFYNCEGKQYLLN 137
Query: 293 ILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHL 352
++D PGH F + S +LV+ A +G QT + LA A + +
Sbjct: 138 LIDTPGHVDFSYEVSRSLSACQGVLLVVDANEG-------IQAQTVANFFLAFEAQLS-V 189
Query: 353 IVLINKMDDPTVNWSNERYEECKEKL 378
I +INK+D N ER E EK+
Sbjct: 190 IPVINKID--LKNADPERVENQIEKV 213
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 52.4 bits (124), Expect = 1e-06
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 65/290 (22%)
Query: 190 EEEEIPKPKSVVAPPGA------PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL 243
+++++ K K V P A P+ V ++ GHVD GK+T+ L
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIM--GHVDHGKTTL---------------L 197
Query: 244 EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEK-KHFTILDAPGHKSF 302
+K+ + A++T G T +G + T LD PGH +F
Sbjct: 198 DKFRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAF 241
Query: 303 VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP 362
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 242 SAMRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKA 293
Query: 363 TVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 422
+ E+ K++L+ + V + D+ +P S LTG NL ++ + L +
Sbjct: 294 EAD-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEM 344
Query: 423 PYLDNLPNFNRSVDGPIRLPIVDKYKD--MGTVVLGKLESGSICKGQQLV 470
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 345 LELKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 52.4 bits (124), Expect = 1e-06
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 65/290 (22%)
Query: 190 EEEEIPKPKSVVAPPGA------PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTL 243
+++++ K K V P A P+ V ++ GHVD GK+T+ L
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIM--GHVDHGKTTL---------------L 197
Query: 244 EKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEK-KHFTILDAPGHKSF 302
+K+ + A++T G T +G + T LD PGH +F
Sbjct: 198 DKFRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAF 241
Query: 303 VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP 362
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 242 SAMRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKA 293
Query: 363 TVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 422
+ E+ K++L+ + V + D+ +P S LTG NL ++ + L +
Sbjct: 294 EAD-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEM 344
Query: 423 PYLDNLPNFNRSVDGPIRLPIVDKYKD--MGTVVLGKLESGSICKGQQLV 470
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 345 LELKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
Length = 751
Score = 51.6 bits (122), Expect = 2e-06
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 207 PKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDT 266
P ++ N+ H+D+GK+T+ +++Y TG + K E K K+ + +D+
Sbjct: 42 PNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKM------HEVKGKDG----VGAVMDS 91
Query: 267 NQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 325
+ ER +G T++ Y + + I+D PGH F + D AVLV+ A G
Sbjct: 92 MELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGG 150
>gi|4503507 eukaryotic translation initiation factor 2, subunit 3
gamma, 52kDa [Homo sapiens]
Length = 472
Score = 51.2 bits (121), Expect = 3e-06
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 212 VNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEK-------------YEREAKEKNRETW 258
+N+ IGHV GKST+ I + + K LE+ Y+ + R
Sbjct: 42 INIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSCPRPEC 101
Query: 259 YLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVL 318
Y S T D+ T G +H + +D PGH + M+ GA+ D A+L
Sbjct: 102 YRSCGSSTP----DEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALL 157
Query: 319 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 373
+I+ + + QT EH + +KH+++L NK+D + + E+YE+
Sbjct: 158 LIAGNESCPQP------QTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQ 206
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 48.9 bits (115), Expect = 1e-05
Identities = 46/166 (27%), Positives = 62/166 (37%), Gaps = 19/166 (11%)
Query: 3 PGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADME-----APGPGPCG---GGGSLAAAA 54
PG GGGGGGGGGG G S S P ++ AP P S + ++
Sbjct: 127 PGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSS 186
Query: 55 EAQRENLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG 114
++R S A Q + F N SFL+ AA G GA +G G
Sbjct: 187 SSKRTECSVARESQ-GSSGPEFSCN--------SFLQEKAAAATGGTGPGAGIGAATGTG 237
Query: 115 GRAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEH 160
G + P S C S + S+P + +P +W H
Sbjct: 238 GSSEPSACSDHPIPGC--SLKEEEKQHSQPQQQQLDPNNPAANWIH 281
Score = 29.6 bits (65), Expect = 8.9
Identities = 57/218 (26%), Positives = 75/218 (34%), Gaps = 38/218 (17%)
Query: 8 GGGGGGGGGSSSGSSSS---DSA----PDCWDQADMEAPGPGPCGGGGSLA-AAAEAQRE 59
GG G SSSG+ S+ DS D A PGPG G +A A E
Sbjct: 3 GGSAGRLKMSSSGTLSNYYVDSLIGHEGDEVFAARFGPPGPGAQGRPAGVADGPAATAAE 62
Query: 60 NLSAAFSRQLNVNAKPF--VPNVHAAEFVPSFLRGPAAPPPPAGGAANNHG--------- 108
S +F+ + V + + VP+ A S L P PPPP +A+ G
Sbjct: 63 FASCSFAPRSAVFSASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEP 122
Query: 109 --------AGSGAGGRAAPVES-SQEEQSLCEGSNSAVSME---LSEPIENGETEMSPE- 155
G G GG P S G + + E P T S
Sbjct: 123 LPGFPGGAGGGGGGGGGGPGRGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSST 182
Query: 156 --ESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEE 191
S + E S A GS G PE S + ++E+
Sbjct: 183 SLSSSSKRTECSVARESQGSSG----PEFSCNSFLQEK 216
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 48.9 bits (115), Expect = 1e-05
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAA 64
SGGGGGG GGGGSSS S+SS G G G S ++ ++ +
Sbjct: 396 SGGGGGGSGGGGSSSSSNSSAGG------------GAGKQNGATSYSSVVADSPAEVALS 443
Query: 65 FSRQLNVNAKPFVPNVHAAEFVPSFLRGP-AAPPPPAGGAANNHGAGSGAGGRAAPV 120
S N +++ P PS + P AA P AGG A G SG P+
Sbjct: 444 SSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPL 500
Score = 30.8 bits (68), Expect = 4.0
Identities = 38/154 (24%), Positives = 52/154 (33%), Gaps = 37/154 (24%)
Query: 78 PNVHAAEFVPSFLRGPAA--PPPPAGGAANNHGAGSGAGGRAAPVESS------------ 123
P +A P GP+ P PP+ + G GSG GG ++ SS
Sbjct: 368 PAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGAT 427
Query: 124 ----------QEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGS 173
E G N+A S L P +G P S KE + A G G
Sbjct: 428 SYSSVVADSPAEVALSSSGGNNASSQALGPP--SGPHNPPPSTS---KEPSAAAPTGAGG 482
Query: 174 LGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP 207
+ G ++ +P P V PP +P
Sbjct: 483 VAPGSGNNSGGPSLL-----VPLP---VNPPSSP 508
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 47.4 bits (111), Expect = 4e-05
Identities = 57/217 (26%), Positives = 80/217 (36%), Gaps = 21/217 (9%)
Query: 9 GGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPG------PCGGGGSLAAAAE----AQR 58
GGGGGGGG S ++P A +P P P SL + E QR
Sbjct: 441 GGGGGGGGPSPEREEVRTSPRPASPARSGSPAPETTNESVPFAQHSSLDSRIEMLLKEQR 500
Query: 59 ENLS--AAFSRQLNVNAKPFVPNVHAAEFVPSFL-RGPAAPPPPAGGAANNHGAGSGAGG 115
S A+ + + N+ + VPS GP PPP + GSG G
Sbjct: 501 SKFSFLASDTEEEEENSSMVLGARDTGSEVPSGSGHGPCTPPPAPANFEDVAPTGSGEPG 560
Query: 116 --RAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGG-- 171
R +P + Q + S C +S ME+S+ G +P + P
Sbjct: 561 ATRESPKANGQNQASPC---SSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPY 617
Query: 172 -GSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP 207
SL G PP + A+ + + P P+ PP P
Sbjct: 618 LASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPPPP 654
Score = 30.8 bits (68), Expect = 4.0
Identities = 23/100 (23%), Positives = 32/100 (32%)
Query: 111 SGAGGRAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPG 170
S + + + S E S S+ S S + + S S E E E E
Sbjct: 1011 SDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEER 1070
Query: 171 GGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKE 210
+L PP E+P P+ V P P E
Sbjct: 1071 PAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPE 1110
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 46.6 bits (109), Expect = 7e-05
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 2 DPGSGGGGGGGGGGGSSS------GSSSSDSAPDCWDQADMEAPGPGPCGGGGS 49
+PG GGGGGGGG GGS+S G +S A A GPG GGGGS
Sbjct: 24 EPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGS 77
Score = 33.5 bits (75), Expect = 0.61
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPG---PGPCGGGGSLAA 52
SGGG GGG GGS +SS + P PG GP G GG A+
Sbjct: 2 SGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKAS 52
Score = 30.8 bits (68), Expect = 4.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 5 SGGGGGGGGGGGSSSGSSSSDSAP 28
S GGG GG GGG S G + S P
Sbjct: 64 SSGGGPGGSGGGGSGGPGAGTSFP 87
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 46.2 bits (108), Expect = 9e-05
Identities = 69/262 (26%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 119 PVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLGDGR 178
P E +EE+ E S E E GE+E S E E E++S+ + G +L D +
Sbjct: 531 PEEEEEEEEEEEEDEESEEEEE-----EEGESEGS--EGDEEDEKVSDEKDSGKTL-DKK 582
Query: 179 PPEE--------SAHEMMEEEEEIPKPKSVVAPPGAPKKEHVN--------VVFIGHVDA 222
P +E S + +EE K K + ++VN + +GHVD
Sbjct: 583 PSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICVLGHVDT 642
Query: 223 GKSTIGGQIMYLTGMVDK-RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGR 281
GK+ I +DK R + EA ++ + L+ E+ K
Sbjct: 643 GKTKI----------LDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKN----- 687
Query: 282 AYFETEKKHFT---ILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTR 338
F+ E I+D PGH+SF G+S D+A+LV+ G QT
Sbjct: 688 --FDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHG-------LEPQTI 738
Query: 339 EHAMLAKTAGVKHLIVLINKMD 360
E L K+ IV +NK+D
Sbjct: 739 ESINLLKSKKCP-FIVALNKID 759
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,380,771
Number of Sequences: 37866
Number of extensions: 1637064
Number of successful extensions: 20998
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 455
Number of HSP's that attempted gapping in prelim test: 11890
Number of HSP's gapped (non-prelim): 5049
length of query: 636
length of database: 18,247,518
effective HSP length: 109
effective length of query: 527
effective length of database: 14,120,124
effective search space: 7441305348
effective search space used: 7441305348
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.