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Search of human proteins with 192807332
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|192807332 arsenate resistance protein 2 isoform c [Homo
sapiens]
(875 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 1816 0.0
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 1811 0.0
gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens] 1800 0.0
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 1795 0.0
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 81 4e-15
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 68 3e-11
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 66 1e-10
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 65 4e-10
gi|210032580 SET domain containing 1B [Homo sapiens] 64 6e-10
gi|221219020 NYD-SP11 protein [Homo sapiens] 62 2e-09
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 62 3e-09
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 61 4e-09
gi|55741677 SET domain containing 1A [Homo sapiens] 59 2e-08
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 59 3e-08
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 59 3e-08
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 59 3e-08
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 59 3e-08
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 57 6e-08
gi|4557509 cylicin 2 [Homo sapiens] 57 6e-08
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 57 6e-08
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 57 7e-08
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 57 1e-07
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 56 1e-07
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 56 2e-07
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 56 2e-07
gi|55956788 nucleolin [Homo sapiens] 55 2e-07
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 55 2e-07
gi|83921609 hypothetical protein LOC127254 [Homo sapiens] 55 3e-07
gi|168229156 NFKB activating protein [Homo sapiens] 55 4e-07
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 55 4e-07
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 1816 bits (4704), Expect = 0.0
Identities = 875/875 (100%), Positives = 875/875 (100%)
Query: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR
Sbjct: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
Query: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV
Sbjct: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
Query: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR
Sbjct: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
Query: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI
Sbjct: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER
Sbjct: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
Query: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD
Sbjct: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
Query: 361 SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC 420
SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC
Sbjct: 361 SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC 420
Query: 421 SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN 480
SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN
Sbjct: 421 SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN 480
Query: 481 LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE 540
LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE
Sbjct: 481 LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE 540
Query: 541 PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER 600
PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER
Sbjct: 541 PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER 600
Query: 601 DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE 660
DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE
Sbjct: 601 DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE 660
Query: 661 WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK 720
WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK
Sbjct: 661 WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK 720
Query: 721 FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGL 780
FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGL
Sbjct: 721 FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGL 780
Query: 781 TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG 840
TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG
Sbjct: 781 TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG 840
Query: 841 QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 875
QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF
Sbjct: 841 QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 875
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 1811 bits (4692), Expect = 0.0
Identities = 875/876 (99%), Positives = 875/876 (99%), Gaps = 1/876 (0%)
Query: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR
Sbjct: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
Query: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV
Sbjct: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
Query: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR
Sbjct: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
Query: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI
Sbjct: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER
Sbjct: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
Query: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD
Sbjct: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
Query: 361 SFDEGSVSESESESESGQAEEEKEEAE-ALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT 419
SFDEGSVSESESESESGQAEEEKEEAE ALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT
Sbjct: 361 SFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT 420
Query: 420 CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW 479
CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW
Sbjct: 421 CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW 480
Query: 480 NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS 539
NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS
Sbjct: 481 NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS 540
Query: 540 EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE 599
EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE
Sbjct: 541 EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE 600
Query: 600 RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL 659
RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL
Sbjct: 601 RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL 660
Query: 660 EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK 719
EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK
Sbjct: 661 EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK 720
Query: 720 KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPG 779
KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPG
Sbjct: 721 KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPG 780
Query: 780 LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR 839
LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR
Sbjct: 781 LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR 840
Query: 840 GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 875
GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF
Sbjct: 841 GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 876
>gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens]
Length = 871
Score = 1800 bits (4661), Expect = 0.0
Identities = 870/875 (99%), Positives = 870/875 (99%), Gaps = 4/875 (0%)
Query: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR
Sbjct: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
Query: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV
Sbjct: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
Query: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR
Sbjct: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
Query: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI
Sbjct: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER
Sbjct: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
Query: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD
Sbjct: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
Query: 361 SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC 420
SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC
Sbjct: 361 SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC 420
Query: 421 SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN 480
SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN
Sbjct: 421 SLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWN 480
Query: 481 LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE 540
LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE
Sbjct: 481 LQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASE 540
Query: 541 PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER 600
PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER
Sbjct: 541 PGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVER 600
Query: 601 DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE 660
DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE
Sbjct: 601 DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLE 660
Query: 661 WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK 720
WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK
Sbjct: 661 WQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKK 720
Query: 721 FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGL 780
FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQ L
Sbjct: 721 FKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQ----SL 776
Query: 781 TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG 840
TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG
Sbjct: 777 TPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRG 836
Query: 841 QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 875
QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF
Sbjct: 837 QGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 871
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 1795 bits (4649), Expect = 0.0
Identities = 870/876 (99%), Positives = 870/876 (99%), Gaps = 5/876 (0%)
Query: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR
Sbjct: 1 MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
Query: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV
Sbjct: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV 120
Query: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR
Sbjct: 121 HIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFR 180
Query: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI
Sbjct: 181 RQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDI 240
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER
Sbjct: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER 300
Query: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD
Sbjct: 301 KTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDD 360
Query: 361 SFDEGSVSESESESESGQAEEEKEEAE-ALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT 419
SFDEGSVSESESESESGQAEEEKEEAE ALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT
Sbjct: 361 SFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT 420
Query: 420 CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW 479
CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW
Sbjct: 421 CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICW 480
Query: 480 NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS 539
NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS
Sbjct: 481 NLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWAS 540
Query: 540 EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE 599
EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE
Sbjct: 541 EPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVE 600
Query: 600 RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL 659
RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL
Sbjct: 601 RDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVL 660
Query: 660 EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK 719
EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK
Sbjct: 661 EWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGK 720
Query: 720 KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPG 779
KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQ
Sbjct: 721 KFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQ----S 776
Query: 780 LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR 839
LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR
Sbjct: 777 LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR 836
Query: 840 GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 875
GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF
Sbjct: 837 GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF 872
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 81.3 bits (199), Expect = 4e-15
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDE---KKEDGKQAENDSSN-DDK 324
++E+EE+Q + GE K+++ G G ++ N+K E +KEDGK+ E+ N +D
Sbjct: 130 QKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDG 189
Query: 325 TKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE 384
+K E + ++E++KE + + + K++ K G D V E E E E G+ +E
Sbjct: 190 KEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDV----KVKEDEKEREDGKEDEGGN 245
Query: 385 EAEALKEKEKPKEEEWEKPKD 405
E EA KEKE KEEE K +D
Sbjct: 246 EEEAGKEKEDLKEEEEGKEED 266
Score = 59.3 bits (142), Expect = 2e-08
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 256 KMEGGTEN-DLRILEQEEEEEQAGKPGEPSKKEE----GRAGAGLGDGERKTNDKDEKKE 310
K E G E+ D + E +E++ + GE +K++E G G G G+ ++ + ++++E
Sbjct: 141 KGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEE 200
Query: 311 DGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSES 370
D K+ + N+D +K + K+ K ++ EKE ++G E
Sbjct: 201 DRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKER-----------------EDGKEDEG 243
Query: 371 ESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
+E E+G+ +E+ +E E KE+++ KE++ +K
Sbjct: 244 GNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKK 275
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK-KEDGKQAE 316
+G E+ E E+EEE + G+ + E+G+ +G+ +DEK +EDGK E
Sbjct: 183 KGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGK--E 240
Query: 317 NDSSNDDKTKKSEGD-GDKEEKKEDSEKEAKKSSKKRNRKHS 357
++ N+++ K + D ++EE KE E E K+ K+ S
Sbjct: 241 DEGGNEEEAGKEKEDLKEEEEGKE--EDEIKEDDGKKEEPQS 280
Score = 38.5 bits (88), Expect = 0.027
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 4/148 (2%)
Query: 267 ILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
+ E ++E E +K E + + K+E ED + + +
Sbjct: 63 VAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAE 122
Query: 327 KSEGDGDKEEKKEDSEK---EAKKSSKKRNRKHSGDDSFDEGSVSESESESESG-QAEEE 382
+ D++E +ED + EA K K + G + + E E E G + E+
Sbjct: 123 VKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDG 182
Query: 383 KEEAEALKEKEKPKEEEWEKPKDAAGLE 410
K E KEK + ++EE ++ + G E
Sbjct: 183 KGNGEDGKEKGEDEKEEEDRKETGDGKE 210
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 68.2 bits (165), Expect = 3e-11
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329
+EEE E + GE +EEG G G +GE + +E++ +G + E + + + ++ E
Sbjct: 843 EEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEG-EGEEEGEGEGEEEEGE 901
Query: 330 GDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVS----ESESESESGQAEEEKEE 385
G+G++E + E E+E + ++ + G+ +EG E E E E G+ E E+EE
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEE 961
Query: 386 AEALKEKEKPKEEE 399
E E+E E E
Sbjct: 962 GEGEGEEEGEGEGE 975
Score = 67.4 bits (163), Expect = 6e-11
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKE---DGKQAENDSSNDDKT 325
EQE++E + G E +++ E G+GE + D++E++E +GK+ + +
Sbjct: 709 EQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGER 768
Query: 326 KKSEGDGDKEE---KKEDSEKEAKK-SSKKRNRKHSGDDSFDEGSVSESESESESGQAEE 381
+K EG+ KEE K+E E+E + ++ + G++ + G V E E G+ EE
Sbjct: 769 EKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREE 828
Query: 382 EKEEAEALKEKEKPKEEEWE 401
E+EE E +E+ + +EEE E
Sbjct: 829 EEEEGEGEEEEGEGEEEEGE 848
Score = 67.4 bits (163), Expect = 6e-11
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKE------- 310
EG E + E E EEE+ GE + EG G G+GE + + E++E
Sbjct: 864 EGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEE 923
Query: 311 DGKQAENDSSNDD---KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSV 367
+G++ E + ++ + + EG+G++EE + + E+E + + + G++ EG
Sbjct: 924 EGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEE 983
Query: 368 SESESESESGQAEEE-KEEAEALKEKEKPKEEEWE 401
E E E E + EEE +EE E +E E EEE E
Sbjct: 984 EEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEE 1018
Score = 67.0 bits (162), Expect = 7e-11
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
K EGG E E E + GK ++EEG G+GE + + +E++ +GK
Sbjct: 808 KEEGG--------EVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGE 859
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE 375
E + + + EG+G+ EE E+ E E ++ + + G+ +E E E E
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEE--EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 917
Query: 376 SGQAEEEKEEAEALKEKEKPKEE 398
G+ EEE EE E E+E+ + E
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGE 940
Score = 67.0 bits (162), Expect = 7e-11
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTND---KDEKKEDGKQ 314
EG E + E EEE E+ GE + E G G+GE + + ++E + +G++
Sbjct: 855 EGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEE 914
Query: 315 AENDSSNDDKTKKSEGDGDKEE--------KKEDSEKEAKKSSKKRNRKHSGDDSFD-EG 365
E + +++ ++ EG+G++EE + E E+E + ++ + G++ + EG
Sbjct: 915 EEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEG 974
Query: 366 SVSESESESESGQAEEEKEEAEALKEKEKPKEEEWE 401
E E E E G+ E E+EE E E+E EEE E
Sbjct: 975 EEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGE 1010
Score = 65.9 bits (159), Expect = 2e-10
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
+ME G E + E+EE + + + E KEEG G+ E++ ++ +++ GK+
Sbjct: 726 EMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEE 785
Query: 316 ENDSSNDD-KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESES 374
+ + D + ++ E +G EEK+E E E + + + + ++ EG E E E
Sbjct: 786 KGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEE-GEGEEEEGEGEE 844
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLE 410
E G+ EEE+ E + +E E+ + EE + + G E
Sbjct: 845 EEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEE 880
Score = 65.5 bits (158), Expect = 2e-10
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGE--PSKKEEGRAGAGLGDG-ERKTNDKDEKKEDGKQ 314
EG E + +E E E+E+ + E K+E+G G+G E +T + E+KE+G +
Sbjct: 754 EGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGE 813
Query: 315 AENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESES 374
E + K ++ E + + E ++E+ E E ++ + + +EG E E E
Sbjct: 814 VEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGE--EEGEEGEGEEEG 871
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWEK 402
E G+ E E+EE E E+E E E E+
Sbjct: 872 EEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Score = 65.1 bits (157), Expect = 3e-10
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDG----- 312
EG E + + EEEE GK E ++ EG G+GE + + + ++E+G
Sbjct: 899 EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGE 958
Query: 313 -KQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESE 371
++ E + + + + EG+G+ EE++ + E E ++ ++ + G+ +EG E
Sbjct: 959 EEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGE---EEGEGEGEE 1015
Query: 372 SESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLE 410
E + E E EE E E+E+ +EE E+ K+ G E
Sbjct: 1016 EEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEE 1054
Score = 64.3 bits (155), Expect = 5e-10
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 255 IKMEGGTENDLRILEQE---EEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDE-KKE 310
+K+ GG + IL + + E GK + E+G G G G E ++ + + E
Sbjct: 613 VKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDE 672
Query: 311 DGKQAENDSSNDDKTKKSEGD---GDKEE-KKEDSEKEAKKSSKKRNRKHSGDDSFDEGS 366
+ ++ E D + + EG+ +KEE KK D E++ +K ++ ++K + + G
Sbjct: 673 EREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGE 732
Query: 367 VSESESESESGQAEEE-------KEEAEALK-EKEKPKEEEWEKPKDAAGLECK 412
E E E G EEE KEE E + E E+ KEE K ++ AG E K
Sbjct: 733 EEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEK 786
Score = 63.9 bits (154), Expect = 6e-10
Identities = 39/160 (24%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRA---GAGLGDGERKTNDKDEKKEDG 312
+ME E + + E+EE +++ G+ E ++E+G + +G + + + E++E
Sbjct: 685 EMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGD 744
Query: 313 KQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESES 372
++ E + + K EG+G++ E + + E+ +K ++ ++ G++ D+G E E+
Sbjct: 745 REEEEEKEGEGK---EEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEET 801
Query: 373 ES-----------ESGQAEEEKEEAEALKEKEKPKEEEWE 401
E E G+ EE K E E +E+ + +EEE E
Sbjct: 802 EGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGE 841
Score = 62.8 bits (151), Expect = 1e-09
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGD-GERKTNDKDEKKEDGK-----QAENDSSND 322
E EEE E G+ GE +EE G G + GE + ++ E +E+G+ + E + +
Sbjct: 965 EGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGE 1024
Query: 323 DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEE 382
+ ++ EG+G++EE +E+ E+ K+ + NR++ ++ +EG E+G+ E E
Sbjct: 1025 VEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKY------QETGEEENE 1078
Query: 383 KEEAEALKEKEKPK 396
+++ E K+ K K
Sbjct: 1079 RQDGEEYKKVSKIK 1092
Score = 62.4 bits (150), Expect = 2e-09
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSK-KEEGRAGAGLGD-----GERKTNDKDEKKED 311
EG E + E+EE E + + GE + +EEG G G G+ GE + + E +E+
Sbjct: 839 EGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE 898
Query: 312 GKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKK------------SSKKRNRKHSGD 359
+ E + + + ++ EG+G EE+ E+ E E ++ ++ + G+
Sbjct: 899 EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGE 958
Query: 360 DSFDEG-SVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
+ EG E E E E G+ E E+EE E E+E+ +EE E+
Sbjct: 959 EEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEE 1002
Score = 62.0 bits (149), Expect = 2e-09
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGER------KTNDKDEKKEDGKQAENDSSNDD 323
+EE EE G+ E + EG G G G+ E + + E +E+G+ + +
Sbjct: 922 EEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEG 981
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVS----ESESESESGQA 379
+ ++ EG+G++EE +E+ E+E + + ++ EG V E E E E G+
Sbjct: 982 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEE 1041
Query: 380 EEEKEEAEALKEKEKPKEEEWEK 402
E E+ E E E+ + EE E+
Sbjct: 1042 EGEEREKEGEGEENRRNREEEEE 1064
Score = 60.5 bits (145), Expect = 7e-09
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 5/239 (2%)
Query: 165 ETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVF 224
E E ++ K D Q+ ++ H+ E + +E +E G +
Sbjct: 693 EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKE 752
Query: 225 LSLMETGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPS 284
E G + + + +K + K + A + +G E D E+EE E + + E
Sbjct: 753 GEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGG 812
Query: 285 KKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSE-K 343
+ E G G G+ E + + + ++E+G+ E + +++ EG+G EE+ E+ E +
Sbjct: 813 EVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEE----EGEGKGEEEGEEGEGE 868
Query: 344 EAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
E + + + G+ +E E E E G+ EEE E +E E EEE E+
Sbjct: 869 EEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
Score = 60.5 bits (145), Expect = 7e-09
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEN 317
EG E + E EEEE + GE ++ EG G G+GE + + + ++E+G++
Sbjct: 945 EGEGEEEEGEWEGEEEEGE----GEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGE 1000
Query: 318 DSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
+ ++ EG+G+ EE+ E+ E E + ++ + ++ +EG E E E E
Sbjct: 1001 EEGEGEE----EGEGEGEEE-EEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Query: 378 QAEEEKEEAEALKEKEKPKEE 398
+ E+EE E K +E +EE
Sbjct: 1056 RRNREEEEEEEGKYQETGEEE 1076
Score = 58.9 bits (141), Expect = 2e-08
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 270 QEEEEEQAGKPGEPSKKEE-----GRAGAGLGDGERKTNDKDEKKE-DGKQAENDSSNDD 323
+EEE E G+ GE +EE G G G+GE + + E+ E +G++ E + ++
Sbjct: 933 EEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEE 992
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEK 383
+ + EG+ + E ++E + ++ + + G++ EG E E E E + E E
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Query: 384 EEAEALKEKEKPKEEEWEK 402
EE +E+E+ +E ++++
Sbjct: 1053 EENRRNREEEEEEEGKYQE 1071
Score = 57.4 bits (137), Expect = 6e-08
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 242 KADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGL-GDGER 300
KA ++ + D + +G E E ++EE+ E +K++GR G+GE+
Sbjct: 640 KAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEER-----EKGEKDKGRGEMERPGEGEK 694
Query: 301 KTNDKDE------------KKEDGKQAENDSSNDDKTKKSEGDGDKEE--KKEDSEKEAK 346
+ +K+E ++E G Q E + ++ ++ G+G++EE ++E+ EKE +
Sbjct: 695 ELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGE 754
Query: 347 KSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDA 406
+ + G+ +EG + E + + EEE ++ E +E+ + + EE E+ +
Sbjct: 755 GKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEV 814
Query: 407 AGLE 410
G E
Sbjct: 815 EGGE 818
Score = 52.8 bits (125), Expect = 1e-06
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK-- 326
E EEEEE GE + EG G G G+ E + +E++++G+ EN + +++ +
Sbjct: 1012 EGEEEEE-----GEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEE 1066
Query: 327 -KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEE 385
K + G++E +++D E+ K S K + K+ ++ + SV+ ++ + +++ +
Sbjct: 1067 GKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQRSKMPVQS 1126
Query: 386 AEALKEKEKPKEEEW 400
LK ++ W
Sbjct: 1127 KRLLKNGPSGSKKFW 1141
Score = 47.4 bits (111), Expect = 6e-05
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 283 PSKKE--EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKED 340
P +KE E G G+ + E + N+++ K G++ + + +DD T K+E E K
Sbjct: 587 PEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAE----VSEGKAK 642
Query: 341 SEKEAKKSSKKRNRKHSGDDSFDEGSVSE---SESESESGQAEEEKEEAE--ALKEKEKP 395
S EA+ + R GD + +EGS + E E G+ ++ + E E EKE
Sbjct: 643 SVGEAEDGPEGR-----GDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELA 697
Query: 396 KEEEWEKPKDAAGLECKPR 414
++EEW+K +D E K R
Sbjct: 698 EKEEWKK-RDGEEQEQKER 715
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 66.2 bits (160), Expect = 1e-10
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 259 GGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAG-----LGDGERKTNDKDEKKEDGK 313
GG E+ + E E E G+ GE + + E +G G+GE +T K E+ ED
Sbjct: 742 GGQED---VAEAESTGEMPGEEGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDEN 798
Query: 314 QAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSS------KKRNRKHSGDDSFDEGSV 367
+AE N+ + + D E K + E E+++ S K + K D +G
Sbjct: 799 EAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGD 858
Query: 368 SESESESESGQAEEEKEEAEALKEKEKPKEEE 399
SE E E E Q EEE+EE + +E+E+ +EEE
Sbjct: 859 SEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEE 890
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 64.7 bits (156), Expect = 4e-10
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 299 ERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSG 358
+++T + +E +E ++ E + +K K+ + +K++K +++EK +K +++ RK
Sbjct: 7 KKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKR 66
Query: 359 DDSFDEGSVSESESESESGQAEEEKEEAEALKEKEK--PKEEEWEKPK 404
+E E E E E + EEEKEE K+K+K KEEE EK K
Sbjct: 67 KKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 47.4 bits (111), Expect = 6e-05
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 313 KQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESES 372
K+ + ++T+++E + ++EE+KE KE +K +K K ++ E E
Sbjct: 1 KKKKKKKKETEETEETE-ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEE 59
Query: 373 ESESGQAEEEKEEAEALKEKEKPKEEEWEKPKD 405
+ + +++KEE E +E+E+ +EE+ E+ K+
Sbjct: 60 KKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
Score = 34.3 bits (77), Expect = 0.52
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 350 KKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKE-EEWEKPKDAAG 408
KK+ +K + +E +E E E E + E+ KE+ KEKEK K+ +E EK K+
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKR---KEKEKKKKTKETEKRKEKEE 57
Query: 409 LECKPRPLHK 418
E K + K
Sbjct: 58 EEKKRKRKRK 67
Score = 31.2 bits (69), Expect = 4.4
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 17 RRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPP 76
R+E+ + ++ R+R +++ ++ E + E E ++ R R+++ R E
Sbjct: 52 RKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEE 111
Query: 77 QKRMRR 82
+K+ RR
Sbjct: 112 KKKKRR 117
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 63.9 bits (154), Expect = 6e-10
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 259 GGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEND 318
GG E++ L +E+E + + E ++EE D + ++D+DE + D + D
Sbjct: 1032 GGEEDEKESLSEEQESTEEEEEAEEEEEEED-------DDDDDSDDRDESEND----DED 1080
Query: 319 SSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE--S 376
++ + ++K EGD D+EE +A+ +S + + S +S E S S SE E E +
Sbjct: 1081 TALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVVA 1140
Query: 377 GQAEEEKEEAEALKEKEKPK--EEEWEKPKDAAGL 409
+ EEE+EE E + E+ E++E+ + A L
Sbjct: 1141 REEEEEEEEEEMVAEESMASAGPEDFEQDGEEAAL 1175
Score = 48.5 bits (114), Expect = 3e-05
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLG-------DGERKTNDKDEKKEDGKQAENDSSN 321
E+E + + A P E +K++ G D + ++K+ E+ + E +
Sbjct: 995 ERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEA 1054
Query: 322 DDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSV-------------- 367
+++ ++ + D D + +++SE + + ++ + DS +E +V
Sbjct: 1055 EEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSE 1114
Query: 368 ----SESESESESGQAEEEKEEAEALKEKEKPKEEE 399
SE ES SES + E EE +E+E+ +EEE
Sbjct: 1115 SSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEE 1150
Score = 38.5 bits (88), Expect = 0.027
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 289 GRAGAGLGDGERKT----NDKDEKKE--------DGKQAENDSSNDDKTKKSEGDGDKEE 336
G G GLG G R + K ++KE D K+ +S D++ ++SE + D++
Sbjct: 943 GYEGLGLGIGLRGAIRLPSFKVKRKEPPDTTSSGDQKRLRPSTSVDEEDEESERERDRDM 1002
Query: 337 KKEDSE--KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEK 394
E K K R R + G E ES SE ++ EE+EEAE +E+E
Sbjct: 1003 ADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEED 1062
Query: 395 PKEEE 399
+++
Sbjct: 1063 DDDDD 1067
Score = 33.9 bits (76), Expect = 0.68
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 759 PALPEIKPAQPPGPAQILPPG--LTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAV 816
P P + P PP P Q PG + P LP P P P PP L G P +
Sbjct: 685 PGFPPLPPPPPPPPPQ---PGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPI 741
Query: 817 PTGGPPYP 824
PP+P
Sbjct: 742 LPPLPPFP 749
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 16/69 (23%)
Query: 759 PALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPT 818
P P P PP P PP PG P P P P P PP PAV
Sbjct: 682 PPPPGFPPLPPPPP----PPPPQPGFPMPPPLP----PPPPPPPP--------AHPAVTV 725
Query: 819 GGPPYPHAP 827
PP P P
Sbjct: 726 PPPPLPAPP 734
Score = 31.2 bits (69), Expect = 4.4
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 753 LTDAKRPALPEIKPAQP------PGPAQILPPG-LTPGLPYPHQTPQGLMPYGQPRPPIL 805
++D + P+ P P PG A + P L P LP P P G P P PP
Sbjct: 641 ISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLP--PPPGFPPLPPPPPPPP 698
Query: 806 GYGAGAVRPAVPTGGPPYPHA 826
+ P +P PP P A
Sbjct: 699 PQPGFPMPPPLPPPPPPPPPA 719
Score = 30.4 bits (67), Expect = 7.5
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 755 DAKRPALPEIKPAQP----PGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAG 810
+A+ P PE P P P +LP L P LP P P P PP
Sbjct: 1249 EARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPR-------PPRPPSPPPEPETTD 1301
Query: 811 AVRPAVPTGGPPYPHAPYGAG 831
A P+VP H P+ G
Sbjct: 1302 ASHPSVPPEPLAEDHPPHTPG 1322
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 62.0 bits (149), Expect = 2e-09
Identities = 32/104 (30%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 302 TNDKDEKKEDGKQAENDSSNDDKTKKSEGDGD-KEEKKEDSEKEAKKSSKKRNRKHSGDD 360
+ +++E++E+ ++ E + +++ +K E +G+ K+ +KE+ EK+ KK KK+ ++
Sbjct: 2245 SEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE 2304
Query: 361 SFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPK 404
F+E SE E+ES EEE+EE+ +L+E+ ++E +K K
Sbjct: 2305 VFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEK 2348
Score = 47.8 bits (112), Expect = 5e-05
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 267 ILEQEEE---EEQAGKPGEPSK-KEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSND 322
IL+ EEE EE+ P + ++ A G E+ ++ DE + + +E S
Sbjct: 2175 ILDDEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLL 2234
Query: 323 DKTKK-----SEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
D+ +K SE + ++EE++E E+E ++ ++R + G++ E E + + +
Sbjct: 2235 DELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEK 2294
Query: 378 QAEEEKEEAEALKEKEK-PKEEEWEKPKD 405
+ EE +E+ E +EKE+ EEE E D
Sbjct: 2295 KKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Score = 42.4 bits (98), Expect = 0.002
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 285 KKEEGRAGAGLGDGERKTNDKDEK--KEDGKQAENDSSN--DDKTKKSEGDGDKEE---- 336
+K+ R L + R+ +K+EK +E+ K A S DD+ EG ++EE
Sbjct: 2136 EKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDE---EEGGIEEEEVIPF 2192
Query: 337 --KKEDSEKEAKKSSKKRNRKHSGDDSFD---------EGSVSESESESESGQAEEEKEE 385
++ KEAK+ K + + S D + E + E E + EEE+ E
Sbjct: 2193 LKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEERE 2252
Query: 386 AEALKEKEKPKEEEWEKPKDAAGLE 410
E +E+E+ +EEE E+ ++ G E
Sbjct: 2253 EEEEREEEEVREEEEERKEEEEGEE 2277
Score = 40.8 bits (94), Expect = 0.006
Identities = 102/512 (19%), Positives = 202/512 (39%), Gaps = 69/512 (13%)
Query: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA-ENDSS 320
E + R+L++EE+ QAG+ P + E DK K E+ KQ EN S
Sbjct: 1484 EWEKRLLQEEEKLHQAGEKLSPEE-------------EMLQEDKKLKWEEWKQVWENMLS 1530
Query: 321 NDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAE 380
+ K ++ + + + ++E S + +K + + + + + +E +A+
Sbjct: 1531 SKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQ 1590
Query: 381 EEK---EEAEALKEKEKPKEEEWEKPKDA-AGLECKPRPLHKTCSLFMRNIAPNISRAEI 436
EE+ +E E L ++E+ +E K A + R + + F + R E
Sbjct: 1591 EERKLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEK 1650
Query: 437 IS------------LCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNI 484
+S L K++ +VA E + ++ + V + ++E+ QN+
Sbjct: 1651 LSQEAEKLAQKRKKLAKKWE---KVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNL 1707
Query: 485 RLRECELSPGVN------RDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWA 538
+E EL+ + +L+ + +N + ++V KLA ++ W
Sbjct: 1708 DWQEKELAQELEELEWDMEELSWKEEELN--QEEGKLVEEKKKLAE------EEEALAWQ 1759
Query: 539 SEPGTPPLPTSLPSQNPILKNITDYLIE--EVSAEEEELLGSSGGAPPEEPPKEGNPAEI 596
E + T L + +L + L + E EEEE LG E+ K E
Sbjct: 1760 REKLSEE-ETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQKRER 1818
Query: 597 NVERDEKLIKVLDKLLLYLRIVHSLDYYNTCE------YPNEDEMPNRCGIIHVRGPMPP 650
+ E+L K +K++LY + + + N + E+ + N+ + H + +
Sbjct: 1819 WINSMEELTK--NKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTHSKKQLVQ 1876
Query: 651 NRISHGEVLEWQKTFEEKLT----PLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQE 706
+ G + EEKLT ++ +E L+E E + + +VE + ++
Sbjct: 1877 VKNKLGMFNKILAQVEEKLTQEKETVIKKKEKLAETEKKLV-------QVEDSLAKKQEK 1929
Query: 707 LGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEK 738
L ++K L +G + +R + EK
Sbjct: 1930 LAQEKMKLALEKAMVQGKKRLRGELDIAKEEK 1961
Score = 39.7 bits (91), Expect = 0.012
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 43/177 (24%)
Query: 234 DNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGA 293
++LL +++K +++ + + E E ++R +EEEE + + GE + E+
Sbjct: 2231 ESLLDELEKQESLSSEEEEEREEEEEREEEEVR---EEEEERKEEEEGEEKQVEK----- 2282
Query: 294 GLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRN 353
+ E+K K++KKE+ ++ K E +KEE + E E
Sbjct: 2283 --EEEEKKKKKKEKKKEEVQE------------KEEVFEEKEEIMSEEETE--------- 2319
Query: 354 RKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLE 410
S+S+ E E ES EEE + + + +KEK + + ++ K G E
Sbjct: 2320 ------------SLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKSLRGRE 2364
Score = 35.8 bits (81), Expect = 0.18
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSG--DDSFDEGSVSESESESESGQAEE 381
+ +K GDK ++K S+ + +S + + + D+ + S+S E E + E
Sbjct: 2198 RKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEER 2257
Query: 382 EKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHK 418
E+EE +E+ K +EE EK + E K + K
Sbjct: 2258 EEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEK 2294
Score = 31.2 bits (69), Expect = 4.4
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)
Query: 257 MEGGTENDLRILE-QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
++G T+ +R E EEEQA K +A LG E + K KK +
Sbjct: 1329 IQGVTQEVIRHKEVMPREEEQAQK----------KARDMLGLEETQVILKKGKKVIFLEP 1378
Query: 316 ENDSSNDDKTKKSEGDGDKEEKK--EDSEKEAKKSSKKRNR--KHSGDDSFDEGSVSESE 371
N + + +KK EEKK + S K+ +K+ +K + K + + +E +SE
Sbjct: 1379 GNVTMGKEISKK-------EEKKTFQKSPKQGRKAVQKERKVGKIKREMTKEERDMSEEV 1431
Query: 372 SESESGQAEEEKEEAEALKEKEKPKEEEWEKPKD 405
E + + + K+E + + + P ++W+K D
Sbjct: 1432 EEMATLEEKVVKQEGKLVMIERTPSWQDWKKAWD 1465
Score = 30.0 bits (66), Expect = 9.8
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329
++EEEE+ K E K+E + E ++++ + ++ E +S + ++ E
Sbjct: 2281 EKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDRE 2340
Query: 330 GDGDKEEKKEDSEKEAKKSSKKRNR 354
+ K+EK+ +++ +KS + R R
Sbjct: 2341 KEILKKEKQFKLQEQRRKSLRGRER 2365
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 61.6 bits (148), Expect = 3e-09
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 266 RILEQEEEEEQAGKPGEPSKKEEGRAGAGLGD-GERKTNDKDEKKEDGKQAENDSSNDD- 323
+ + EEEE + S+ E G G+ GE +++D ++ + +++S +
Sbjct: 674 KFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESG 733
Query: 324 -KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD-EGSVSESESESESGQAEE 381
+ K++ K + K DSE K++ K + S D+S E S S+SESESE E
Sbjct: 734 LENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESE---PES 790
Query: 382 EKEEAEALKEKE-KPKEEEWEKPKDAAGLE 410
E E KEKE K K++ KD + L+
Sbjct: 791 ESESRRVTKEKEKKTKQDRTPLTKDVSLLD 820
Score = 39.7 bits (91), Expect = 0.012
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 314 QAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK-HSGDDSFDEGSVSESES 372
+A+ ++S +SE + D + DSE E+ S ++ GD + D S SE
Sbjct: 665 KAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQ 724
Query: 373 ESESGQ---AEEEKEEAEALKEKEKPKEEEWEKPKD 405
+SESG+ E ++ K K K E+ EK +
Sbjct: 725 DSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENE 760
Score = 38.1 bits (87), Expect = 0.036
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 334 KEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKE 393
KE K+ + K + +DS D S SESES SESG+ E EE ++ ++
Sbjct: 658 KEWTPAGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSS 717
Query: 394 KPKEEEWEKPKD-AAGLECK 412
+ E + +GLE K
Sbjct: 718 EDSSSEQDSESGRESGLENK 737
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 61.2 bits (147), Expect = 4e-09
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 32/267 (11%)
Query: 148 VMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVG 207
+ KTF E L D E E V + + + ++QQ + +D R K D+ G
Sbjct: 37 IKKTFFEELAVEDKQAGEEEKVLKEKEQQQQQQQQQQKK----KRDTRKGRRKKDVDDDG 92
Query: 208 KRRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRI 267
+ ++ L RL+ LS+ + D+ D + K +GG I
Sbjct: 93 EEKE-----LMERLKK-LSVPTS----------DEEDEVPAPKPRGGKKTKGGNVFAALI 136
Query: 268 LEQ-EEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
+Q EEEEE+ P +P+K E+ R + + ++ K + GK+ ++ + K
Sbjct: 137 QDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQPA----LKGKKGKEEKSKGKAKPQNK 192
Query: 327 KSEGDGDKEEKKED--SEKEAKKSSKKRNRK-HSGDDSFDEGSVSESESESESGQAEEEK 383
+ D ++E+K+E+ EKE K K++ +K G + EG E E E G+++ +
Sbjct: 193 FAALDNEEEDKEEEIIKEKEPPKQGKEKAKKAEQGSEEEGEG----EEEEEEGGESKADD 248
Query: 384 EEAEALKEKEKPKEEEWEKPKDAAGLE 410
A K+++K +++ E + A L+
Sbjct: 249 PYAHLSKKEKKKLKKQMEYERQVASLK 275
Score = 35.4 bits (80), Expect = 0.23
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 295 LGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNR 354
+GDGE T+ D+ + GK+ D K KK+ + E K+ E+E K++ +
Sbjct: 15 IGDGE-STSPSDKVVKKGKK-------DKKIKKTFFEELAVEDKQAGEEEKVLKEKEQQQ 66
Query: 355 KHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKP---KEEEWEKPKDAAGLEC 411
+ + + + + EEKE E LK+ P +E+E PK G +
Sbjct: 67 QQQQQQQKKKRDTRKGRRKKDVDDDGEEKELMERLKKLSVPTSDEEDEVPAPKPRGGKKT 126
Query: 412 K 412
K
Sbjct: 127 K 127
Score = 32.3 bits (72), Expect = 2.0
Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 13/132 (9%)
Query: 296 GDGERKTNDKDEKKEDGKQAENDSSNDDK-TKKSEGDGDKEEKK------------EDSE 342
G+ E+ +K+++++ +Q + + K +K + D D EEK+ D E
Sbjct: 53 GEEEKVLKEKEQQQQQQQQQQKKKRDTRKGRRKKDVDDDGEEKELMERLKKLSVPTSDEE 112
Query: 343 KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
E + +K G + F +SE E E + + + E + + EE+
Sbjct: 113 DEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQPA 172
Query: 403 PKDAAGLECKPR 414
K G E K +
Sbjct: 173 LKGKKGKEEKSK 184
Score = 32.0 bits (71), Expect = 2.6
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
+Q E E G GE + + G D + K +E + KQA ++K K
Sbjct: 7 QQPPEPEWIGD-GESTSPSDKVVKKGKKDKKIKKTFFEELAVEDKQA----GEEEKVLKE 61
Query: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE---- 384
+ +++++++ +++ K+ ++K RK DD +E + E + ++EE E
Sbjct: 62 K---EQQQQQQQQQQKKKRDTRKGRRKKDVDDDGEEKELMERLKKLSVPTSDEEDEVPAP 118
Query: 385 --------------EAEALKEKEKPKEEEWEKPKDA 406
A + E+ +EEE PK A
Sbjct: 119 KPRGGKKTKGGNVFAALIQDQSEEEEEEEKHPPKPA 154
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 58.9 bits (141), Expect = 2e-08
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 269 EQEEEEEQAGKPG-EPSKKEEGRAGAGLGDGE-RKTNDKDEKKEDGKQAENDSSNDDKTK 326
EQE+E + G+PG +P K++E R G G+ RK+ D + E+ Q + +++ +
Sbjct: 926 EQEKEAGEPGRPGTKPPKRDEER---GKTQGKHRKSFALDSEGEEASQESSSEKDEEDDE 982
Query: 327 KSEGDGDKEE-----KKE----DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESE-SESES 376
+ E D D+EE KKE D E E SS K + D D S SES S S S
Sbjct: 983 EDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSS 1042
Query: 377 GQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRP 415
+ + + E E+E E+ + AA P P
Sbjct: 1043 SSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPP 1081
Score = 40.4 bits (93), Expect = 0.007
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 8/165 (4%)
Query: 279 KPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGK--QAENDSSNDDKTKKSEGDGDKEE 336
K G + E G+GL R + K ++KE + +A + T E + D E+
Sbjct: 868 KSGGTTGIEAFAFGSGLRGALRLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDPEQ 927
Query: 337 KKEDSE------KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALK 390
+KE E K K+ ++ + SF S E S+ S + +EE +E +
Sbjct: 928 EKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEED 987
Query: 391 EKEKPKEEEWEKPKDAAGLECKPRPLHKTCSLFMRNIAPNISRAE 435
E + + +K + + E + CSL+ + N S ++
Sbjct: 988 EDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSD 1032
Score = 36.2 bits (82), Expect = 0.14
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 190 AHKDEEWFRSKYHPDEVGK------RRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKA 243
A +DE+ + E G+ +R E RG Q + R +L G ++A
Sbjct: 918 AEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEG---------EEA 968
Query: 244 DAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTN 303
+++ K E E D ++EE + T
Sbjct: 969 SQ-----ESSSEKDEEDDEEDEEDEDREEAVD--------------------------TT 997
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
K+ + DG+ E+DSS+ + ++ DG+ DS +++ SS + S S
Sbjct: 998 KKETEVSDGEDEESDSSS-KCSLYADSDGE-----NDSTSDSESSSSSSSSSSSSSSSSS 1051
Query: 364 EGSVSESESESESGQAEEEKEEAEALKEKEKPKEE---------EWEKPKDAAGLECKPR 414
S S SES SE EEE+E AL P E E P+ AG P
Sbjct: 1052 SSSSSSSESSSED---EEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPL 1108
Query: 415 P 415
P
Sbjct: 1109 P 1109
Score = 32.7 bits (73), Expect = 1.5
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 759 PALPEIKPAQPPGPAQILPPGLTPGLP--YPHQTPQGLMPYGQPRPPILGYGAGAVRPAV 816
P P+ P PP P PP LP YP P L+P PRP G P
Sbjct: 598 PTPPQQPPPPPPPPPP--PPPYLASLPLGYPPHQPAYLLP---PRPD------GPPPPEY 646
Query: 817 PTGGPPYPH 825
P PP PH
Sbjct: 647 PPPPPPPPH 655
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 58.5 bits (140), Expect = 3e-08
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 260 GTENDLRILEQEEEEEQAGKPGEPSKKEEGR-----------------AGAGLGDGERKT 302
G ++++R E+E E + GK S++++ R G GERK
Sbjct: 33 GWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKK 92
Query: 303 NDKDEKK----EDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKK-RNRKHS 357
+++ KK ++ K+ E K KK G KE K+ + ++E K+ +K R RK
Sbjct: 93 EERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKE 152
Query: 358 GDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPR 414
+ E + + G+ EEE++E E KE++K + E+ K+ E + R
Sbjct: 153 EREKERERKERKKRERKQVGEKEEERKEKER-KERKKRERNRKERKKERERKERRER 208
Score = 57.4 bits (137), Expect = 6e-08
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
E++ E + K GE K+E R ++ +K+++K+ K+ +S + K ++
Sbjct: 76 ERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERER 135
Query: 329 EGDGDKEEKKE------DSEKE-AKKSSKKRNRKHSGDDSFDEGSVSESE------SESE 375
+ + +EE+KE + EKE +K KKR RK G+ + E + E
Sbjct: 136 KEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Query: 376 SGQAEEEKEEAEALKEKEKPKEEEWEKPKD 405
+ E KE E KE++K +E + E+ KD
Sbjct: 196 RKKERERKERRERKKERKKKEERKKERQKD 225
Score = 57.4 bits (137), Expect = 6e-08
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN 321
E + + +E+E ++ + + KKE+ G +G+ + ++ K+E+ K+ E
Sbjct: 94 ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEE 153
Query: 322 DDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEE 381
+K ++ + + K E+K+ EKE ++ K+R + + + E E E + + +E
Sbjct: 154 REKERERK-ERKKRERKQVGEKEEERKEKERKERKKRERNRKERK-KERERKERRERKKE 211
Query: 382 EKEEAEALKEKEKPKEEEWEKPKDAAGLECKPR 414
K++ E KE++K ++ W + K+ E K R
Sbjct: 212 RKKKEERKKERQKDRQTNW-REKERGKRERKER 243
Score = 56.6 bits (135), Expect = 1e-07
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDE------KKEDGKQAENDSSND 322
++ +E E+ K + KKE GR + ERK K E +K++ ++ E +
Sbjct: 104 KENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKER 163
Query: 323 DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEE 382
K ++ + +EE+KE KE KK + R + + + + + E + E +
Sbjct: 164 KKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQ 223
Query: 383 KEEAEALKEKEKPKEEEWEKPK 404
K+ +EKE+ K E E+ K
Sbjct: 224 KDRQTNWREKERGKRERKERKK 245
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 310 EDGKQAENDSSNDDKTKKSEGDGDK--EEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSV 367
+ G Q+E + + EG ++ E KKE E+E +K +++ RK +G
Sbjct: 31 QPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGER 90
Query: 368 SESESESESGQAEEEKEEAEALKEKEKPKEEE 399
+ E E + + E+E +E E KEK K KE++
Sbjct: 91 KKEERERKKRRREKENKEGEE-KEKRKKKEKK 121
Score = 40.0 bits (92), Expect = 0.009
Identities = 21/85 (24%), Positives = 43/85 (50%)
Query: 6 DEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRER 65
+E R R + R++ + ++ RER ER++ + E + R+ + R E + +RNR+ER
Sbjct: 137 EERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKER 196
Query: 66 FSPPRHELSPPQKRMRRDWDEHSSD 90
+ +K+ R+ +E +
Sbjct: 197 KKERERKERRERKKERKKKEERKKE 221
Score = 37.4 bits (85), Expect = 0.061
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 7 EYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERF 66
E +RRR+K +E + ++ ++++++ RG R G+ER + E + +R RER
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERG-----RTSKEGKERERKEERKREERKERERK 150
Query: 67 SPPRHELSPPQKRMRRD 83
R + ++R +R+
Sbjct: 151 KEEREKERERKERKKRE 167
Score = 37.4 bits (85), Expect = 0.061
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 7 EYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRS--RGEYRDYDRNRRE 64
E +R+ R K R R + + RER ERR ++ +R +ER+ + +R+ +R +RE
Sbjct: 180 EKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRE 239
Query: 65 R 65
R
Sbjct: 240 R 240
Score = 36.6 bits (83), Expect = 0.10
Identities = 21/102 (20%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
+ E + + R E+E +E + + + +KEE R + +++ ++ E+K++ ++
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERK 203
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKEDS--EKEAKKSSKKRNRK 355
E ++ KK E ++++ ++ + EKE K +K +K
Sbjct: 204 ERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 35.4 bits (80), Expect = 0.23
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNR 62
+S+ + +RR R+K +RER + +R RER ++ + + E +R + RR + ++ +
Sbjct: 56 ESERKKERREREKRKRER-EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEK 114
Query: 63 RER 65
R++
Sbjct: 115 RKK 117
Score = 33.9 bits (76), Expect = 0.68
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER---RSRGEYRDYD 59
+ + E + R+ K RE RER++R+R +RE +R RER +GE + +
Sbjct: 40 EREREIETRKEGKKERESERKKERREREKRKR-----EREKERKRERGKKEKKGERKKEE 94
Query: 60 RNRRER 65
R R++R
Sbjct: 95 RERKKR 100
Score = 32.3 bits (72), Expect = 2.0
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNR 62
+ + E +R+ K ++ER S+E ER R + +R+ + +ER + E R+ +R R
Sbjct: 106 NKEGEEKEKRKKKEKKERG--RTSKEGKERERKE---ERKREERKERERKKEEREKERER 160
Query: 63 RERFSPPRHELSPPQKRMR 81
+ER R ++ ++ +
Sbjct: 161 KERKKRERKQVGEKEEERK 179
Score = 32.0 bits (71), Expect = 2.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 7 EYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGE-----YRDYDRN 61
E R ++ RER + + ER ER R + +RE +R R+ R + E ++ +R
Sbjct: 122 ERGRTSKEGKERERKEERKREERKERERKKE--EREKERERKERKKRERKQVGEKEEERK 179
Query: 62 RRERFSPPRHELSPPQKRMRRDWDE 86
+ER + E + +++ R+ E
Sbjct: 180 EKERKERKKRERNRKERKKERERKE 204
Score = 31.6 bits (70), Expect = 3.4
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 25 RSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMRRDW 84
R RER+ R + +RE +R +ERR R ++ +RER + E +K+ R
Sbjct: 39 REREREIETRKEGKKERESERKKERRER------EKRKREREKERKRERGKKEKKGERKK 92
Query: 85 DE 86
+E
Sbjct: 93 EE 94
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 58.5 bits (140), Expect = 3e-08
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
K E G E + + E+E++ ++ + +K+E + G R+ K E+KE ++
Sbjct: 68 KRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE--RER 125
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE 375
EN + K KK ++E+K + E+ K+ K++ RK + E + E + E E
Sbjct: 126 ENKQRRERKRKKRRKKKRRKERKREKER-GKRERKRKKRKKEEREKKRERNRKERKKERE 184
Query: 376 SGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTCSLFMRNIAPNISRAE 435
+ E K+E + KE+ K KE + ++ D RPL + S F R + R
Sbjct: 185 RKERRERKKERK--KERRKKKERKKDRKTDRQTDSQVFRPLRE--SAFNRVTVTGVFRYR 240
Query: 436 I 436
I
Sbjct: 241 I 241
Score = 53.5 bits (127), Expect = 8e-07
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
+++ ++ + GK E +KE + + ER+ K++KK + KQ + K KK
Sbjct: 63 KKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQR---GRRERKKKKE 119
Query: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEA 388
+ ++E K+ K K+ KKR ++ + + + + E + + E+ E
Sbjct: 120 RKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKER 179
Query: 389 LKEKEKPKEEEWEKPK 404
KE+E+ + E +K +
Sbjct: 180 KKERERKERRERKKER 195
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
++E E+E+ + G+ KK+ + G + ERK ++++++++ ++ E +K K+
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGK-ERERKRKEREKQRKERREKERRKRKKEKKKRE 105
Query: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAE-------- 380
+ E+K+ E++ ++ K+ R+ + E + E E G+ E
Sbjct: 106 RKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK 165
Query: 381 EEKEEAEALKEKEKPKEEEWEKPKD 405
EE+E+ KE+ KE E ++ ++
Sbjct: 166 EEREKKRERNRKERKKERERKERRE 190
Score = 52.0 bits (123), Expect = 2e-06
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 271 EEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEG 330
+ E E+ + E K++ R + +K K +K+E GK+ E K+ E
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERER--------KRKER 82
Query: 331 DGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALK 390
+ ++E++E ++ KK KKR RK G + E E E+ Q E K + K
Sbjct: 83 EKQRKERREKERRKRKKEKKKRERKQRGRRE-RKKKKERKERERENKQRRERKRKKRRKK 141
Query: 391 EKEKPKEEEWEKPK 404
++ K ++ E E+ K
Sbjct: 142 KRRKERKREKERGK 155
Score = 38.1 bits (87), Expect = 0.036
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRE--------RDERRRGDDWNDREWDRGRERRSRGE 54
+S+ + +RR R+K +RER + +R RE R +R RG + + +R ++R+ R E
Sbjct: 33 ESERKKERREREKRKRER-EKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 55 ----YRDYDRNRRERFSPPRHELSPPQKRMRRD 83
R ++ +RER R E ++R R+
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERE 124
Score = 37.0 bits (84), Expect = 0.080
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 9 DRRRRDKFRRERSDYDRSRE--RDERRRGDDWNDRE---WDRGRERRSRGEYRDYDRNRR 63
+R R +K RRER R ++ R ER+R + RE R +E R + R+ ++
Sbjct: 122 ERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKK 181
Query: 64 ERFSPPRHELSPPQKRMRRDWDEHSSD 90
ER R E +K+ RR E D
Sbjct: 182 ERERKERRERKKERKKERRKKKERKKD 208
Score = 36.6 bits (83), Expect = 0.10
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 10 RRRRDKFR-RERSDYDRSRERDERRRGDDWNDREWDRGRERRSRG---EYRDYDRNRRER 65
R++R++ + RER +R ++R ERR + ++ + RER+ RG + +R RER
Sbjct: 66 RKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERER 125
Query: 66 FSPPRHELSPPQKRMRR 82
+ R E ++R ++
Sbjct: 126 ENKQRRERKRKKRRKKK 142
Score = 36.6 bits (83), Expect = 0.10
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 7 EYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERF 66
E R+ R+K R+ER + +R + + E+++ +R+ RER+ + E ++ +R ++R
Sbjct: 76 ERKRKEREKQRKERREKERRKRKKEKKK----RERKQRGRRERKKKKERKERERENKQRR 131
Query: 67 SPPRHELSPPQKRMRR 82
R + ++R R
Sbjct: 132 ERKRKKRRKKKRRKER 147
Score = 36.2 bits (82), Expect = 0.14
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 313 KQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESES 372
K S K ++ +E +KE + KK KKR ++ + G E +
Sbjct: 27 KPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKR-------ERGKERERKR 79
Query: 373 ESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
+ Q +E +E+ ++KEK K E ++
Sbjct: 80 KEREKQRKERREKERRKRKKEKKKRERKQR 109
Score = 35.4 bits (80), Expect = 0.23
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 333 DKEEKKEDSEKEAKKSSKKRNRKHS-GDDSFDEGSVSESESESESGQAEEEKEEAEAL-K 390
+ E KKE E+E +K +++ RK G + E E E + E EK+ E K
Sbjct: 33 ESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREK 92
Query: 391 EKEKPKEEEWEKPKDAAG 408
E+ K K+E+ ++ + G
Sbjct: 93 ERRKRKKEKKKRERKQRG 110
Score = 35.0 bits (79), Expect = 0.30
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 10 RRRRDKFRRERSDYDRSRERDERRRGDDWNDRE-WDRGRERRSRGEYRDYDRNRRERFSP 68
+ RR+K RR+R + RER +R R + +E +R RE + R E + R +++R
Sbjct: 87 KERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKE 146
Query: 69 PRHELSPPQKRMRR 82
+ E ++ +R
Sbjct: 147 RKREKERGKRERKR 160
Score = 33.9 bits (76), Expect = 0.68
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDY---- 58
+ + E R R K +++R +R +ER ER+R + R+ R +ERR R + +
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKER-ERKRKEREKQRKERREKERRKRKKEKKKRERK 107
Query: 59 DRNRRERFSPPRHELSPPQKRMRRD 83
R RRER + + + RR+
Sbjct: 108 QRGRRERKKKKERKERERENKQRRE 132
Score = 33.1 bits (74), Expect = 1.2
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 5 DDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGE-------YRD 57
+ E +R+++K +RER R + ++ R + + + R R+R+ R + R+
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 58 YDRNRRERFSPPRHELSPPQKRMR 81
+R +RER R + +KR R
Sbjct: 151 KERGKRERKRKKRKKEEREKKRER 174
Score = 30.8 bits (68), Expect = 5.7
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 7 EYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDR 60
E R++R K RE+ +ER + R + +R+ +R +ERR + E R DR
Sbjct: 157 ERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKE-RKKDR 209
Score = 30.0 bits (66), Expect = 9.8
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 10 RRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPP 69
+ R+K +RER+ +R +ER+ + R + +R+ +R R+++ R + R DR + P
Sbjct: 165 KEEREK-KRERNRKERKKERERKERRERKKERKKER-RKKKERKKDRKTDRQTDSQVFRP 222
Query: 70 RHE 72
E
Sbjct: 223 LRE 225
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 58.5 bits (140), Expect = 3e-08
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 266 RILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKT 325
+ L + EE+ E K E +++ K EKK+ G+ + + SS+ D +
Sbjct: 46 KALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSS 105
Query: 326 KKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEE 385
S D + E+K K+ K+ KK+NR H +S S+SE+ES+S+
Sbjct: 106 SSSS-DSEDEDK-----KQGKRRKKKKNRSHKSSES----SMSETESDSK---------- 145
Query: 386 AEALKEKEKPKEEEWEKPKDAAGLECK 412
++LK+K+K K+ EK KD GL K
Sbjct: 146 -DSLKKKKKSKDGT-EKEKDIKGLSKK 170
Score = 54.3 bits (129), Expect = 5e-07
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 257 MEGGTENDLRILEQEEEEEQAGK-PGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
+ G + + +++E++++G+ S + + + + E K K KK+ +
Sbjct: 71 LSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSH 130
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKE----DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESE 371
++ S+ +T+ D K++KK + EK+ K SKKR + +S D S+SESE
Sbjct: 131 KSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKR-KMYSEDKPLSSESLSESE 189
Query: 372 SESE----SGQAEEEKEEA-EALKEKEKPKEEEWEKPKDAA 407
E ++ EE+E+A E K+K+K K+ +K K AA
Sbjct: 190 YIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAA 230
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 58.5 bits (140), Expect = 3e-08
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 266 RILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKT 325
+ L + EE+ E K E +++ K EKK+ G+ + + SS+ D +
Sbjct: 56 KALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSS 115
Query: 326 KKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEE 385
S D + E+K K+ K+ KK+NR H +S S+SE+ES+S+
Sbjct: 116 SSSS-DSEDEDK-----KQGKRRKKKKNRSHKSSES----SMSETESDSK---------- 155
Query: 386 AEALKEKEKPKEEEWEKPKDAAGLECK 412
++LK+K+K K+ EK KD GL K
Sbjct: 156 -DSLKKKKKSKDGT-EKEKDIKGLSKK 180
Score = 54.3 bits (129), Expect = 5e-07
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 257 MEGGTENDLRILEQEEEEEQAGK-PGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
+ G + + +++E++++G+ S + + + + E K K KK+ +
Sbjct: 81 LSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSH 140
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKE----DSEKEAKKSSKKRNRKHSGDDSFDEGSVSESE 371
++ S+ +T+ D K++KK + EK+ K SKKR + +S D S+SESE
Sbjct: 141 KSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKR-KMYSEDKPLSSESLSESE 199
Query: 372 SESE----SGQAEEEKEEA-EALKEKEKPKEEEWEKPKDAA 407
E ++ EE+E+A E K+K+K K+ +K K AA
Sbjct: 200 YIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAA 240
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 57.4 bits (137), Expect = 6e-08
Identities = 34/157 (21%), Positives = 73/157 (46%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEN 317
+G E + + +E+E E + + E ++E R + E++ + E++ D +
Sbjct: 295 KGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRT 354
Query: 318 DSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
+ D+ ++ + D D+E + ++ ++ K R+R+ + + E E E E
Sbjct: 355 KERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERE 414
Query: 378 QAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPR 414
+ E + E E K+K++ +EE+ E + LE K R
Sbjct: 415 REREREREREREKDKKRDREEDEEDAYERRKLERKLR 451
Score = 56.6 bits (135), Expect = 1e-07
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 33/235 (14%)
Query: 204 DEVGKRRQEARGALQNRLRVFLSLM-----ETGWFDNLLLDIDKADAIVKMLDAAVIKME 258
+E +R Q +GA++ +R + S + E+ K D + A +I
Sbjct: 198 EETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYP 257
Query: 259 GGTENDLRILEQEEE-------------------EEQAGKPG----EPSKKEEGRAGAGL 295
T+ D+ +E EE+ EE+ GK E K+ R
Sbjct: 258 LITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERE 317
Query: 296 GDGERKTNDKDEKKEDGKQAENDSSND-----DKTKKSEGDGDKEEKKEDSEKEAKKSSK 350
+ ER+ +++ ++E ++ E + + D+ + E D D++ +++ + S +
Sbjct: 318 RERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDR 377
Query: 351 KRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKD 405
++R S + S D E E E E + E + E E +E+E+ +E E +K +D
Sbjct: 378 NKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRD 432
Score = 47.0 bits (110), Expect = 8e-05
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER-KTNDKDEKKEDGKQAENDSS 320
E + R E+E E E+ + + ++E R D +R K D+D +E + + + S
Sbjct: 319 ERERREREREREREREREKEKERERERERDR----DRDRTKERDRDRDRERDRDRDRERS 374
Query: 321 ND---DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
+D D+++ E D+E ++E + ++ ++R R+ + + E + + +
Sbjct: 375 SDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDRE 434
Query: 378 QAEEEKEEAEALKEKEKPKEEEWEK 402
+ EE+ E L+ K + KE +++
Sbjct: 435 EDEEDAYERRKLERKLREKEAAYQE 459
Score = 44.7 bits (104), Expect = 4e-04
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 3 DSDDEYDRRR-RDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-RSRGEYRDYDR 60
+ + E +R R RD+ R + D DR RERD R + +DR DR R R +SR R+ +R
Sbjct: 338 EKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER 397
Query: 61 NR-RERFSPPRHELSPPQKRMRRDWDEHSSD 90
R RER E ++R R E D
Sbjct: 398 EREREREREREREREREREREREREREREKD 428
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 7 EYDRRRRDKFR---RERSDYDRSRERDERRRGDDWNDREWDRGRER-RSRGEYRDYDRNR 62
E +RR R++ R RER + +R RER+ R + +RE +R R+R R++ RD DR R
Sbjct: 306 EKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRER 365
Query: 63 -----RERFSPPRHELSPPQKRMR 81
RER S + S +++ R
Sbjct: 366 DRDRDRERSSDRNKDRSRSREKSR 389
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/160 (18%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGER-----KTNDKDEKKEDGKQAENDSSND- 322
++E + ++ + K+ R+ D ER + +++ ++E ++ E + +
Sbjct: 362 DRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERER 421
Query: 323 DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVS--------ESESES 374
++ ++ + D+EE +ED+ + K K R ++ + + + E E+E
Sbjct: 422 EREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAER 481
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPR 414
E + E +EA+ LKE + +++ + PK G + R
Sbjct: 482 EEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKR 521
Score = 39.7 bits (91), Expect = 0.012
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-----------RS 51
+ + E +R R + RER + +R R+RD + D DRE DR R+R RS
Sbjct: 326 EREREREREREKEKERER-ERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRS 384
Query: 52 RGEYRDYDRNR-RERFSPPRHELSPPQKRMR 81
R + RD +R R RER E ++R R
Sbjct: 385 REKSRDRERERERERERERERERERERERER 415
Score = 39.7 bits (91), Expect = 0.012
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 264 DLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD 323
++R ++ E E+ + E ++E + L + D D+ ++D K S+
Sbjct: 465 EIRERKKTREYEKEAEREEERRREMAKEAKRL---KEFLEDYDDDRDDPKYYRG-SALQK 520
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEK 383
+ + E + + +E+ EKE + ++R D E E E+E +++
Sbjct: 521 RLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQE 580
Query: 384 EEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKTC---SLFMRNIAPNISRA 434
E+E +E+++ KEE+ E+P +E + P K C +L + AP++S A
Sbjct: 581 PESEEEEEEKQEKEEKREEP-----MEEEEEPEQKPCLKPTLRPISSAPSVSSA 629
Score = 37.7 bits (86), Expect = 0.047
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 11 RRRDKFRRERSDYDRSRERD-ERRRGDDWNDREWDRGRER-RSRGEYRDYDRNRRERFSP 68
+ R + +ER + +R RER+ ERR + +RE +R +E+ R R RD DR+R +
Sbjct: 300 KERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDR 359
Query: 69 PRHELSPPQKRMRRDWD-EHSSD 90
R + RD D E SSD
Sbjct: 360 DR------DRERDRDRDRERSSD 376
Score = 37.4 bits (85), Expect = 0.061
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 3 DSDDEYDRRRRDKFRRERS-DYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRN 61
D + E +R R + RER + +R RER+ R + D++ DR + E R +R
Sbjct: 390 DREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERK 449
Query: 62 RRERFSPPRHELSPPQKRMRRDWDEHSSD 90
RE+ + + L + R R+ E+ +
Sbjct: 450 LREKEAAYQERLKNWEIRERKKTREYEKE 478
Score = 36.6 bits (83), Expect = 0.10
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 SDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-RSRGEYRDYDRNR 62
SD DR R + R+R + +R RER+ R + +RE +R RER R R +D R+R
Sbjct: 375 SDRNKDRSRSREKSRDR-EREREREREREREREREREREREREREREREREREKDKKRDR 433
Query: 63 RE 64
E
Sbjct: 434 EE 435
Score = 35.0 bits (79), Expect = 0.30
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 25/116 (21%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGR--------------- 47
+ + E +R R + RER + +R RE+D++R ++ + ++R +
Sbjct: 402 ERERERERERERERERER-EREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQER 460
Query: 48 ----ERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMR---RDWDEHSSDP-YHSG 95
E R R + R+Y++ ER R E++ KR++ D+D+ DP Y+ G
Sbjct: 461 LKNWEIRERKKTREYEK-EAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRG 515
Score = 35.0 bits (79), Expect = 0.30
Identities = 28/147 (19%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
E+E E E+ + + +EE A ER+ ++ ++++ E + + + +K
Sbjct: 416 EREREREREREKDKKRDREEDEEDAY----ERRKLERKLREKEAAYQERLKNWEIRERKK 471
Query: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEA 388
+ +KE ++E+ + KR ++ D D + + + ++E EA
Sbjct: 472 TREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEA 531
Query: 389 LKEKEKPKEEEWEKPKDAAGLECKPRP 415
+ K ++EE E+ + E P P
Sbjct: 532 DERDRKREKEELEEIRQRLLAEGHPDP 558
Score = 33.1 bits (74), Expect = 1.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 11 RRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRER-----RSRGEYRDYDRNRRER 65
R R++ R + +R RER+ R + +RE +R RE+ R E Y+R + ER
Sbjct: 389 RDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLER 448
Score = 32.3 bits (72), Expect = 2.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 6 DEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRE 64
D + + +K ++E+ + +ER ER +RE +R RERR R R+ +R R +
Sbjct: 286 DTHKKLEEEKGKKEKERQEIEKERRER-------ERERERERERREREREREREREREK 337
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 57.4 bits (137), Expect = 6e-08
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 258 EGGTENDLRILEQEEE-------EEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKE 310
+GGTE D + +++ + E QA K E K E+G+ A GD E K KD K+
Sbjct: 210 KGGTEKDSKKGKKDSKKGKDSAIELQAVKADE-KKDEDGKKDANKGD-ESKDAKKDAKEI 267
Query: 311 DGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSES 370
K+ + D T D K+E K+D+ K+AKK +KK K S D D ++
Sbjct: 268 --KKGKKDKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKK 325
Query: 371 ESESESGQAEEEKEEAEALKE 391
+++ ++ + ++ E+ +A K+
Sbjct: 326 DAKKDAKKNAKKDEKKDAKKK 346
Score = 56.2 bits (134), Expect = 1e-07
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 269 EQEEEEEQAGKPGEPSKKE--EGRAGAGLGDGERKTNDKDEKK--EDGKQAENDSSNDDK 324
E E+E+ A K + KK+ +G+ A +GE+ +KD KK +D K+ ++ +
Sbjct: 177 ESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQA 236
Query: 325 TK---KSEGDGDKEEKKEDSEKEAKKSS------KKRNRKHSGDDSFDEGSVSESESESE 375
K K + DG K+ K D K+AKK + KK +K S DS + V + +
Sbjct: 237 VKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDA 296
Query: 376 SGQAEE------EKEEAEALKEKEKPKEEEWEK 402
+ A++ EKE A++ K+ +K +++ +K
Sbjct: 297 TKDAKKVAKKDTEKESADSKKDAKKNAKKDAKK 329
Score = 53.9 bits (128), Expect = 6e-07
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 266 RILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKK----EDGKQAENDSSN 321
R +E + + + GK GE ++ + + E K KD KK E GK+ + D+
Sbjct: 103 RTVEVDSKAAEIGKKGEDKTTQKDTTDS---ESELKQGKKDSKKGKDIEKGKEEKLDAKK 159
Query: 322 DDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEE 381
D K K + + K+ E ++ K +KK N+K D + +G S +ESE E G E+
Sbjct: 160 DSKKGKKDAEKGKDSATESEDE--KGGAKKDNKKDKKDSN--KGKDSATESEGEKGGTEK 215
Query: 382 EKEEAEALKEKEKPKEEEWE 401
+ ++ + K+ +K K+ E
Sbjct: 216 DSKKGK--KDSKKGKDSAIE 233
Score = 50.8 bits (120), Expect = 5e-06
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 268 LEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKK 327
+E+ +EE+ K + SKK + A G ++K K+D K+ + D SN K
Sbjct: 147 IEKGKEEKLDAK--KDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKD-SNKGKDSA 203
Query: 328 SEGDGDKEEKKEDSEKEAKKSSKKRN-----RKHSGDDSFDEGSVSESESESESGQAEEE 382
+E +G+K ++DS+K K S K ++ + D+ DE ++ ES A+++
Sbjct: 204 TESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKD 263
Query: 383 -KEEAEALKEKEKPKEEEWEKPKD 405
KE + K+K+KP + + D
Sbjct: 264 AKEIKKGKKDKKKPSSTDSDSKDD 287
Score = 48.5 bits (114), Expect = 3e-05
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 268 LEQEEEEEQAGKPGEPSKKEEGRAGA----GLGDGERKTNDKDEKKEDGKQAENDSSND- 322
L+Q +++ + GK E K+E+ A G D E+ + E +++ A+ D+ D
Sbjct: 134 LKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDK 193
Query: 323 -DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEE 381
D K + + E +K +EK++KK K++ K D + + +V E + E G+ +
Sbjct: 194 KDSNKGKDSATESEGEKGGTEKDSKKG--KKDSKKGKDSAIELQAVKADEKKDEDGKKDA 251
Query: 382 EK--EEAEALKEKEKPKEEEWEKPKDAA 407
K E +A K+ ++ K+ + +K K ++
Sbjct: 252 NKGDESKDAKKDAKEIKKGKKDKKKPSS 279
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 308 KKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSV 367
KK + K + D+++ + K K+ K + KE K +KK ++K D + S
Sbjct: 116 KKGEDKTTQKDTTDSESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSA 175
Query: 368 SESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
+ESE E + + +K++ ++ K K+ E E EK
Sbjct: 176 TESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEK 210
Score = 38.5 bits (88), Expect = 0.027
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 279 KPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDS------SNDDKTKKSEGDG 332
K G+ KK+ + D +K + KD K+ K A+ D+ S D K ++ D
Sbjct: 268 KKGKKDKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDA 327
Query: 333 DKEEKKEDSEKEAKKSSKKRNR 354
K+ KK +++K+ KK +KK+ +
Sbjct: 328 KKDAKK-NAKKDEKKDAKKKGK 348
Score = 30.0 bits (66), Expect = 9.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 349 SKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDA 406
SK G+D + ++SESE + G+ + +K K+ EK KEE+ + KD+
Sbjct: 109 SKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKG-----KDIEKGKEEKLDAKKDS 161
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 57.4 bits (137), Expect = 6e-08
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 299 ERKTNDKDEKKED--GKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKH 356
++K DK KK++ K+ E D D+ K GD ++KKED ++ K+ +K
Sbjct: 798 DKKEKDKKSKKDERKDKKEERDDETDEPKPKRRKSGDDKDKKEDRDERKKEDKRK----- 852
Query: 357 SGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPK-EEEWEKPKDAAGLE--CKP 413
DDS D + E+E ++ Q E + EAE +++E + EEE K D + CK
Sbjct: 853 --DDSKD-----DDETEEDNNQDEYDPMEAEEAEDEEDDRDEEEMTKRDDKRDINRYCKE 905
Query: 414 RP 415
RP
Sbjct: 906 RP 907
Score = 34.3 bits (77), Expect = 0.52
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 3 DSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWND--REWDRGRERRSRGEYRDYDR 60
+ DDE D + K R+ D D+ +RDER++ D D ++ D E ++ EY +
Sbjct: 817 ERDDETDEPK-PKRRKSGDDKDKKEDRDERKKEDKRKDDSKDDDETEEDNNQDEYDPMEA 875
Query: 61 NRRERFSPPRHELSPPQKRMRRDWDEHSSD 90
E R E ++ +RD + + +
Sbjct: 876 EEAEDEEDDRDEEEMTKRDDKRDINRYCKE 905
Score = 30.4 bits (67), Expect = 7.5
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 26 SRERDERRRGDDWNDREWDRGRER---RSRGEYRDYDRNRRERFSPPRHELSPPQKRMRR 82
SR RGD +R+ DR RER R R R R +R R PR E +R+RR
Sbjct: 299 SRFSGRNDRGDQVPNRKDDRSRERERERRRSRERSPQR-KRSRERSPRRERERSPRRVRR 357
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 57.0 bits (136), Expect = 7e-08
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 263 NDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSND 322
++LRI + E++ E + + S +E GR K K + G++ + +D
Sbjct: 203 SELRIHDLEDDLEMSSDASDASGEEGGRVP--------KAKKKAPLAKGGRKKKKKKGSD 254
Query: 323 DKTKKSEGDGDKEEKKED-------SEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE 375
D+ + DGD E ++ D S +E +S K ++ G DE S S ESE E
Sbjct: 255 DEAFEDSDDGDFEGQEVDYMSDGSSSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEE 314
Query: 376 SGQAEEEKEEAEALKEKEKPKEEEWEKPKDAA 407
EE+KEE E EK+ P +E ++ KD++
Sbjct: 315 K-PPEEDKEEEE---EKKAPTPQEKKRRKDSS 342
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 288 EGRAGAGLGDGERKTNDKDEKKEDGKQAEN-----DSSNDDKTKKSEGDGDKEEKKEDSE 342
EG+ + DG + ++ E K Q E D +D + E +E+K+E+ E
Sbjct: 267 EGQEVDYMSDGSSSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEE 326
Query: 343 KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEE 398
K+A +K+ RK S + ES+S ES E K+K PK E
Sbjct: 327 KKAPTPQEKKRRKDSSE---------ESDSSEESDIDSEASSALFMAKKKTPPKRE 373
Score = 45.4 bits (106), Expect = 2e-04
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 263 NDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSND 322
N I++Q ++Q E K++ GR A E + +D ++ E A + S +
Sbjct: 172 NHFSIMQQRRLKDQDQDEDEEEKEKRGRRKAS----ELRIHDLEDDLEMSSDASDASGEE 227
Query: 323 DKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD-------EGSVSESESESE 375
G + K + AK KK+ +K S D++F+ EG + S+
Sbjct: 228 ---------GGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGS 278
Query: 376 SGQAEEEKEEAEALKEKEKPK----------EEEWEKPKD 405
S EE + +A+A +++E PK E E EKP +
Sbjct: 279 SSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPE 318
Score = 39.7 bits (91), Expect = 0.012
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329
QEE E +A P ++EEG G + +D E+ E+ K E
Sbjct: 282 QEEPESKAKAP----QQEEGPKGVD------EQSDSSEESEEEKPPE------------- 318
Query: 330 GDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEAL 389
E+K+E+ EK+A +K+ RK S ++S S ES+ +SE+ A ++
Sbjct: 319 -----EDKEEEEEKKAPTPQEKKRRKDSSEES---DSSEESDIDSEASSALFMAKKKTPP 370
Query: 390 KEKEKP 395
K + KP
Sbjct: 371 KRERKP 376
Score = 36.6 bits (83), Expect = 0.10
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEN 317
EG D + EE EE+ KP E K+EE E+K EKK +E
Sbjct: 296 EGPKGVDEQSDSSEESEEE--KPPEEDKEEE---------EEKKAPTPQEKKRRKDSSEE 344
Query: 318 DSSNDDKTKKSEGDGD--KEEKKEDSEKEAKKS-SKKRNRKHSGDDSFDEGSVSE----S 370
S+++ SE +KK ++E K S R G S + GS S +
Sbjct: 345 SDSSEESDIDSEASSALFMAKKKTPPKRERKPSGGSSRGNSRPGTPSAEGGSTSSTLRAA 404
Query: 371 ESESESGQAEEEKEEAEALKEKEKPK 396
S+ E G+ E A+ L+ P+
Sbjct: 405 ASKLEQGKRVSEMPAAKRLRLDTGPQ 430
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 56.6 bits (135), Expect = 1e-07
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 251 DAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKE 310
DA + E + +++ +EEE+ Q K EP KK E + + K E+K+
Sbjct: 806 DAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE--------EEKAPATPKTEEKK 857
Query: 311 DGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK------------HSG 358
D K+ E K K E EK ++S+ EAKK + +K
Sbjct: 858 DSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVK 917
Query: 359 DDSFDEGSVSESESESESGQAEEEK---EEAEALKEKEKPKEEEWEKPKDAAGLECKPRP 415
+D+ + ++ E + +A+E E+ EA EK+ KEE+ +KP++ E K +
Sbjct: 918 EDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKE 977
Query: 416 LHKTCS 421
KT S
Sbjct: 978 DDKTLS 983
Score = 50.1 bits (118), Expect = 9e-06
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 246 IVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEG--RAGAGLGDGERKTN 303
+V+ + + +E TE + ++ E+ EEE+ E K+EEG A G+ E K+
Sbjct: 446 VVEKSEKETVIVEEQTE-ETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSP 504
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
+E K+A++ + K+ +KEE K +E ++ + +K ++
Sbjct: 505 PAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEE------- 557
Query: 364 EGSVSESESESESGQAEEEKEEAEALKEKEK---PKEEEWEKPKDAAGLECKPRPL 416
++S E++S + EE K AE +K EK P +EE + P +A E P+
Sbjct: 558 ----AKSPPEAKSPEKEEAKSPAE-VKSPEKAKSPAKEEAKSPAEAKSPEKAKSPV 608
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 269 EQEEEEEQAGKPGEPSKK-EEGRAGAGLGDGERKTNDKDEKKEDGKQA---ENDSSNDDK 324
+++ ++E+A K P K EE + A E K K E+ ED K+ E ++ +
Sbjct: 856 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 915
Query: 325 TKKSEGDGDKEE--KKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEE 382
K+ +K E KKE + +AK+ SK +K + + D + E + +
Sbjct: 916 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKA 975
Query: 383 KEEAEAL-KEKEKPKEEEWEKPKDAAGLECKP 413
KE+ + L KE KPK E+ EK + KP
Sbjct: 976 KEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKP 1007
Score = 47.0 bits (110), Expect = 8e-05
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSK------KEEGRAGAGLGDGERKTNDKDEKKED 311
EGG E + E+E + A + P K KEE ++ A E K+ +K+E K
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA-----EAKSPEKEEAKSP 541
Query: 312 GKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESE 371
AE S K+ E E K ++EAK ++ ++ + + + +E S +E
Sbjct: 542 ---AEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK-SPAE 597
Query: 372 SESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRP 415
++S KEEA++ E + P +EE + P + E P
Sbjct: 598 AKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSP 641
Score = 45.1 bits (105), Expect = 3e-04
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQA-GKPGEP---SKKEEGRAGAGLG 296
+KA A K + K E + + + EE++E A KP E +KKEE +
Sbjct: 845 EKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVP 904
Query: 297 DGERKTNDKDEKKEDGKQAE---------NDSSNDDKTKKSEGDGDKEEKKEDSEKEAKK 347
E++ K E KED K E +D+ + +K +E EKK+ E++AKK
Sbjct: 905 TPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKK 964
Query: 348 SSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE-EAEALKEKEKPKEEEWEKPK 404
+K + + D+ ++S+ S+ ++ +AE+ + + K EK E++ K K
Sbjct: 965 PEEKPKTEAKAKE--DDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 1020
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 274 EEQAGKPGEPS--KKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGD 331
+E+A P E +KEE ++ A + E+ K KE+ K S + + KS +
Sbjct: 521 KEEAKSPAEAKSPEKEEAKSPAEVKSPEKA---KSPAKEEAKSPPEAKSPEKEEAKSPAE 577
Query: 332 GDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKE 391
EK + KE KS + E + S +E++S + + E ++ ++
Sbjct: 578 VKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK 637
Query: 392 KEKPKEEEWEKPKDAAGLE 410
+ P +EE + P+ A E
Sbjct: 638 AKSPTKEEAKSPEKAKSPE 656
Score = 42.4 bits (98), Expect = 0.002
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 273 EEEQAGKPGEPSKKEEGRAGA---GLGDGERKTNDKDEKKE--DGKQAENDSSNDDKTKK 327
E+E+A P E E+ ++ A E K+ +K+E K + K E S + K
Sbjct: 534 EKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 593
Query: 328 SEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAE 387
S + EK + KE KS + E + S +E +S KEEA+
Sbjct: 594 SPAEAKSPEKAKSPVKEEAKSPAE------AKSPVKEEAKSPAEVKSPEKAKSPTKEEAK 647
Query: 388 ALKEKEKPKEEEWEKPKDA 406
+ ++ + P++EE + P+ A
Sbjct: 648 SPEKAKSPEKEEAKSPEKA 666
Score = 40.8 bits (94), Expect = 0.006
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 275 EQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDK 334
E+A P + K +A + L + + + KKE+ K + + K E
Sbjct: 783 EKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKA 842
Query: 335 EEKKEDS--EKEAKKSSKKRN--RKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALK 390
EE+K + + E KK SKK +K + +E E ES + E +KEEAE K
Sbjct: 843 EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKES-KVEAKKEEAEDKK 901
Query: 391 EKEKPKEE 398
+ P++E
Sbjct: 902 KVPTPEKE 909
Score = 40.4 bits (93), Expect = 0.007
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 274 EEQAGKPGEPSK--KEEGRAGAGLGDGER-KTNDKDEKK--EDGKQAENDSSNDDKTKKS 328
+E+A P E KEE ++ A + E+ K+ K+E K E K E + + + KS
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKS 668
Query: 329 --EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEE--KE 384
+ + EK + K KS +K + E + S + E++S + + KE
Sbjct: 669 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE 728
Query: 385 EAEALKEKEKPKEEEWEKPKDAAGLE 410
EA+ ++ + P +EE + P+ A E
Sbjct: 729 EAKTPEKAKSPVKEEAKSPEKAKSPE 754
Score = 39.3 bits (90), Expect = 0.016
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 255 IKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQ 314
+K E + + E+ + + + KEE R+ A + K+ K+E K K
Sbjct: 740 VKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEK- 798
Query: 315 AENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESES 374
A++ D K + E KEE K ++E K K + + ++E +
Sbjct: 799 AKSPLKEDAKAPEKEIP-KKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKK 857
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWEKPKDA 406
+S + E K+EA K +EK KE EKPK++
Sbjct: 858 DSKKEEAPKKEAPKPKVEEK-KEPAVEKPKES 888
Score = 38.1 bits (87), Expect = 0.036
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Query: 267 ILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
+ E+ + E+A P + K +A + + + E K+ +K + E K + S
Sbjct: 712 VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE-EAKSPEKAKSPEKAKTLDVKSPEAKTPA 770
Query: 327 KSEGDGDKE---EKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEK 383
K E + EK + KE KS +K D E + + E E +S EEEK
Sbjct: 771 KEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKE-EVKSPVKEEEK 829
Query: 384 EEAEALKEKEKPKEEEWEK 402
+ +K KE PK+ E EK
Sbjct: 830 PQE--VKVKEPPKKAEEEK 846
Score = 37.4 bits (85), Expect = 0.061
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 272 EEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQ-AENDSSNDDKTKKSEG 330
+EE ++ + +KEE ++ A + E+ K KE+ K AE S K+ E
Sbjct: 555 KEEAKSPPEAKSPEKEEAKSPAEVKSPEKA---KSPAKEEAKSPAEAKSPEKAKSPVKEE 611
Query: 331 DGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALK 390
E K ++EAK ++ ++ + + S ++ E++S EKEEA++ +
Sbjct: 612 AKSPAEAKSPVKEEAKSPAEVKSPEKA-------KSPTKEEAKSPEKAKSPEKEEAKSPE 664
Query: 391 EKEKPKEEEWEKPKDA 406
+ + P + E + P+ A
Sbjct: 665 KAKSPVKAEAKSPEKA 680
Score = 35.8 bits (81), Expect = 0.18
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 272 EEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGD 331
+EE ++ + + +KEE ++ + EK + +AE S K+ E +
Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKE-E 701
Query: 332 GDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALK- 390
EK + KE KS +K + E + S + E++S + + E+A+ L
Sbjct: 702 AKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDV 761
Query: 391 ---EKEKPKEEEWEKPKD 405
E + P +EE P D
Sbjct: 762 KSPEAKTPAKEEARSPAD 779
Score = 35.8 bits (81), Expect = 0.18
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Query: 241 DKADAIVKMLDAAVIKMEGGTENDLRILEQEEE--EEQAGKPGEPSKKEEGRAGAGLGDG 298
+KA + VK + K + + + + E+ + +E+A P E +K E +
Sbjct: 706 EKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSP-EKAKSPEKAKTLDVKSP 764
Query: 299 ERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSG 358
E KT K+E + + + + K + + K KED++ K+ KK K
Sbjct: 765 EAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPV 824
Query: 359 DDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAA 407
+ E E + + +AEEEK A K +EK ++ E PK A
Sbjct: 825 KE---EEKPQEVKVKEPPKKAEEEKAPATP-KTEEKKDSKKEEAPKKEA 869
Score = 34.3 bits (77), Expect = 0.52
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK--KEDGKQAENDSSNDDKTK 326
E+ + E+A P + K +A + + E K+ +K + KE+ K E S +
Sbjct: 658 EEAKSPEKAKSPVKAEAKSPEKAKSPV-KAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 716
Query: 327 KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDE--GSVSESESESESGQAEEEKE 384
KS K+E E KS K K E ++ E+++ EE +
Sbjct: 717 KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARS 776
Query: 385 EAEALKEKEK-PKEEEWEKPKDA 406
A+ EK K P +EE + P+ A
Sbjct: 777 PADKFPEKAKSPVKEEVKSPEKA 799
Score = 31.6 bits (70), Expect = 3.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 338 KEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEE--KEEAEALKEKEKP 395
K SE++ K K ++ +E V+E +E E +A+EE KEE +E+ +
Sbjct: 437 KVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEG 496
Query: 396 KEEEWEKP 403
EEE + P
Sbjct: 497 GEEETKSP 504
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 248 KMLDAAVIKMEGGTENDLRILEQEEEEEQAG--KPGEPSKKEEGRAGAGLGDGERKTNDK 305
K L+ + K+ G E+ + E++++ ++ S + + + D E+K +
Sbjct: 71 KELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKR 130
Query: 306 DEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDS---EKEAKKSSKKRNRKHSGDDSF 362
+KK++ + SS + +S+ K++K +D EK+ + SKKR + + D
Sbjct: 131 RKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPL 190
Query: 363 DEGSVSESESESESGQAEEEK--EEAEALKEKEKPKEEEWEK 402
S SES+ E E QA++++ EE E KEK K K+++ K
Sbjct: 191 SSESSSESDYE-EDVQAKKKRRCEEREQAKEKVKKKKKKQHK 231
Score = 55.1 bits (131), Expect = 3e-07
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 279 KPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKK 338
K E KKE ++ L G ++ K E+K+ K+ SS+ S D
Sbjct: 64 KMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSS------SSSSSDSSSSS 117
Query: 339 EDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEE 398
DSE E KK K+R +K + + S ESESES+ E++K+K+K K+E
Sbjct: 118 SDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESK-----------ESVKKKKKSKDE 166
Query: 399 EWEKPKDAAGLECK 412
EK KD L K
Sbjct: 167 T-EKEKDVRSLSKK 179
Score = 39.3 bits (90), Expect = 0.016
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAG--AGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
E E E +++ K + SK E + L +K+ D+ +E+D D + K
Sbjct: 148 ESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAK 207
Query: 327 KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSES 370
K + E++E ++++ KK KK+++KHS GS +S
Sbjct: 208 KKR----RCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 55.8 bits (133), Expect = 2e-07
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 271 EEEEEQAGKPGEPSKKEEGRAGA----GLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
EE E+ E S+ EE + E K +EK+E+ + E + +
Sbjct: 454 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 513
Query: 327 KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEA 386
K+ KEE+ E E+E ++ ++ + D + + GS E SE E G+ EE + EA
Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEA 573
Query: 387 EALKEKEKPKEEE--WEKPKDAAGLE 410
EA E+ + KEE+ EK ++ A E
Sbjct: 574 EAEGEEAEAKEEKKVEEKSEEVATKE 599
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 299 ERKTNDKDEKKEDGKQAENDS-SNDDKTKKSEGDGDKEEKKEDSEKE--AKKSSKKRN-- 353
E K D+ + E+ A + + K +K E +KEE+ E E+E AKKS K
Sbjct: 459 ETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP 518
Query: 354 --RKHSGDDSFDEGSVSESESE--SESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGL 409
++ G+ +EG E E + ++S QAEE E E EKE+ ++EE E +A G
Sbjct: 519 EVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGE 578
Query: 410 ECKPR 414
E + +
Sbjct: 579 EAEAK 583
Score = 52.4 bits (124), Expect = 2e-06
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 258 EGGTENDLRILEQEEEEEQA--GKPGEPSKKEEGRAGAGLGDGERKTND--KDEKKEDGK 313
EG TE + E E +EE+ K E + KEE A A + E+ + K +E GK
Sbjct: 568 EGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGK 627
Query: 314 QAENDSSNDDKTKKSEGDGDKEEK------KEDSEKEAKKSSKKRNRKHSGDDSFDEGSV 367
S ++K K EEK K E++ K K + + V
Sbjct: 628 SPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPV 687
Query: 368 SESESESESGQAEEEKEEAEALKE--KEKPKEEEWEKPKD 405
E++S++E G+ E+++EE + +KE KE+ E++ EKPKD
Sbjct: 688 EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKD 727
Score = 49.3 bits (116), Expect = 2e-05
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 264 DLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD 323
+L + +EE++E A + E + EE A K + K+E+G++ E + ++
Sbjct: 479 ELAVSMKEEKKEAAEEKEEEPEAEEEEVAA--KKSPVKATAPEVKEEEGEKEEEEGQEEE 536
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEK 383
+ E +G K ++ E+ E + SS+K ++ E +E+E+E E +A+EEK
Sbjct: 537 ---EEEDEGAKSDQAEEGGSEKEGSSEK-------EEGEQEEGETEAEAEGEEAEAKEEK 586
Query: 384 EEAEALKE----KEKPKEEEWEKPKDA 406
+ E +E +E + + EKP+ A
Sbjct: 587 KVEEKSEEVATKEELVADAKVEKPEKA 613
Score = 47.8 bits (112), Expect = 5e-05
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 244 DAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTN 303
+A+ + + + M+ E E++EEE +A + +KK +A A E K
Sbjct: 471 EALTAITEELAVSMK---EEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP----EVKEE 523
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
+ ++++E+G++ E + K+ ++E G EK+ SEKE + + +
Sbjct: 524 EGEKEEEEGQEEEEEEDEGAKSDQAEEGGS--EKEGSSEKEEGEQEEGETEAEA------ 575
Query: 364 EGSVSESESESESGQAEEE---KEEAEALKEKEKPKEEEWEKPK 404
EG +E++ E + + EE KEE A + EKP++ + PK
Sbjct: 576 EGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPK 619
Score = 47.8 bits (112), Expect = 5e-05
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 274 EEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGK----QAENDSSNDDKTKKSE 329
EE+A P S EE ++ A +G GE+K ++ E KE K + + + D KK
Sbjct: 675 EEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKA 734
Query: 330 GDGDKEEK-----------KEDSEKEAKKSSK-----KRNRKHSGD-DSFDEGS-----V 367
KEE K EKE K+ K K K G+ S +EGS
Sbjct: 735 ESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKG 794
Query: 368 SESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKP 413
S E + +G+ E ++E + KEK +EE EK GL+ P
Sbjct: 795 SRKEDIAVNGEVEGKEEVEQETKEKGSGREE--EKGVVTNGLDLSP 838
Score = 45.1 bits (105), Expect = 3e-04
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 269 EQEEEEEQAGKPGEPSK-------KEEGRAGAGLGDGERKTND---KDEKKEDGKQAEND 318
E E EEE+ P K +EEG G E + D K ++ E+G +
Sbjct: 498 EPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG 557
Query: 319 SSNDDKTKKSEGDGDKEEKKEDSE-KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
SS ++ ++ EG+ + E + E++E KE KK +K + ++ + V + E +++S
Sbjct: 558 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPE-KAKSP 616
Query: 378 QAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECK 412
+ EE + P EE+ + P + +E K
Sbjct: 617 VPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEK 651
Score = 41.2 bits (95), Expect = 0.004
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 246 IVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEG--RAGAGLGDGERKTN 303
+V + + + +E T+ + + L+QE+E+E+AG GE +EEG + G + N
Sbjct: 746 VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAG--GEGGSEEEGSDKGAKGSRKEDIAVN 803
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
+ E KE+ +Q + + + +K + D +K KS +K + +
Sbjct: 804 GEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITS 863
Query: 364 EGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
EG ++ ++S ++ EE E E++ ++ EK
Sbjct: 864 EGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEK 902
Score = 34.3 bits (77), Expect = 0.52
Identities = 43/195 (22%), Positives = 74/195 (37%), Gaps = 24/195 (12%)
Query: 668 KLTPLLSVRESLSEEEAQKM---GRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGP 724
K +P+ + + EEE +K G+++ E+E E + +E G +K S +K +G
Sbjct: 509 KKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEK---EGSSEKEEGE 565
Query: 725 --------EFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQIL 776
E + K +K+EE +EVA + DAK + K P P +
Sbjct: 566 QEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 625
Query: 777 PPGLTPGLPYPH--QTPQGLMPYGQ------PRPPILGYGAGAV--RPAVPTGGPPYPHA 826
P P ++P P + P+ P+ G V P P P +
Sbjct: 626 GKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKS 685
Query: 827 PYGAGRGNYDAFRGQ 841
P + + +G+
Sbjct: 686 PVEEAKSKAEVGKGE 700
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 55.8 bits (133), Expect = 2e-07
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 271 EEEEEQAGKPGEPSKKEEGRAGA----GLGDGERKTNDKDEKKEDGKQAENDSSNDDKTK 326
EE E+ E S+ EE + E K +EK+E+ + E + +
Sbjct: 78 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 137
Query: 327 KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEA 386
K+ KEE+ E E+E ++ ++ + D + + GS E SE E G+ EE + EA
Sbjct: 138 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEA 197
Query: 387 EALKEKEKPKEEE--WEKPKDAAGLE 410
EA E+ + KEE+ EK ++ A E
Sbjct: 198 EAEGEEAEAKEEKKVEEKSEEVATKE 223
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 299 ERKTNDKDEKKEDGKQAENDS-SNDDKTKKSEGDGDKEEKKEDSEKE--AKKSSKKRN-- 353
E K D+ + E+ A + + K +K E +KEE+ E E+E AKKS K
Sbjct: 83 ETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP 142
Query: 354 --RKHSGDDSFDEGSVSESESE--SESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGL 409
++ G+ +EG E E + ++S QAEE E E EKE+ ++EE E +A G
Sbjct: 143 EVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGE 202
Query: 410 ECKPR 414
E + +
Sbjct: 203 EAEAK 207
Score = 52.4 bits (124), Expect = 2e-06
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 258 EGGTENDLRILEQEEEEEQA--GKPGEPSKKEEGRAGAGLGDGERKTND--KDEKKEDGK 313
EG TE + E E +EE+ K E + KEE A A + E+ + K +E GK
Sbjct: 192 EGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGK 251
Query: 314 QAENDSSNDDKTKKSEGDGDKEEK------KEDSEKEAKKSSKKRNRKHSGDDSFDEGSV 367
S ++K K EEK K E++ K K + + V
Sbjct: 252 SPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPV 311
Query: 368 SESESESESGQAEEEKEEAEALKE--KEKPKEEEWEKPKD 405
E++S++E G+ E+++EE + +KE KE+ E++ EKPKD
Sbjct: 312 EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKD 351
Score = 49.3 bits (116), Expect = 2e-05
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 264 DLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD 323
+L + +EE++E A + E + EE A K + K+E+G++ E + ++
Sbjct: 103 ELAVSMKEEKKEAAEEKEEEPEAEEEEVAA--KKSPVKATAPEVKEEEGEKEEEEGQEEE 160
Query: 324 KTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEK 383
+ E +G K ++ E+ E + SS+K ++ E +E+E+E E +A+EEK
Sbjct: 161 ---EEEDEGAKSDQAEEGGSEKEGSSEK-------EEGEQEEGETEAEAEGEEAEAKEEK 210
Query: 384 EEAEALKE----KEKPKEEEWEKPKDA 406
+ E +E +E + + EKP+ A
Sbjct: 211 KVEEKSEEVATKEELVADAKVEKPEKA 237
Score = 47.8 bits (112), Expect = 5e-05
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 244 DAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTN 303
+A+ + + + M+ E E++EEE +A + +KK +A A E K
Sbjct: 95 EALTAITEELAVSMK---EEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP----EVKEE 147
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
+ ++++E+G++ E + K+ ++E G EK+ SEKE + + +
Sbjct: 148 EGEKEEEEGQEEEEEEDEGAKSDQAEEGGS--EKEGSSEKEEGEQEEGETEAEA------ 199
Query: 364 EGSVSESESESESGQAEEE---KEEAEALKEKEKPKEEEWEKPK 404
EG +E++ E + + EE KEE A + EKP++ + PK
Sbjct: 200 EGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPK 243
Score = 47.8 bits (112), Expect = 5e-05
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 274 EEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGK----QAENDSSNDDKTKKSE 329
EE+A P S EE ++ A +G GE+K ++ E KE K + + + D KK
Sbjct: 299 EEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKA 358
Query: 330 GDGDKEEK-----------KEDSEKEAKKSSK-----KRNRKHSGD-DSFDEGS-----V 367
KEE K EKE K+ K K K G+ S +EGS
Sbjct: 359 ESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKG 418
Query: 368 SESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKP 413
S E + +G+ E ++E + KEK +EE EK GL+ P
Sbjct: 419 SRKEDIAVNGEVEGKEEVEQETKEKGSGREE--EKGVVTNGLDLSP 462
Score = 45.1 bits (105), Expect = 3e-04
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 269 EQEEEEEQAGKPGEPSK-------KEEGRAGAGLGDGERKTND---KDEKKEDGKQAEND 318
E E EEE+ P K +EEG G E + D K ++ E+G +
Sbjct: 122 EPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEG 181
Query: 319 SSNDDKTKKSEGDGDKEEKKEDSE-KEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
SS ++ ++ EG+ + E + E++E KE KK +K + ++ + V + E +++S
Sbjct: 182 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPE-KAKSP 240
Query: 378 QAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECK 412
+ EE + P EE+ + P + +E K
Sbjct: 241 VPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEK 275
Score = 41.2 bits (95), Expect = 0.004
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 246 IVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEG--RAGAGLGDGERKTN 303
+V + + + +E T+ + + L+QE+E+E+AG GE +EEG + G + N
Sbjct: 370 VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAG--GEGGSEEEGSDKGAKGSRKEDIAVN 427
Query: 304 DKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD 363
+ E KE+ +Q + + + +K + D +K KS +K + +
Sbjct: 428 GEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITS 487
Query: 364 EGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEK 402
EG ++ ++S ++ EE E E++ ++ EK
Sbjct: 488 EGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEK 526
Score = 34.3 bits (77), Expect = 0.52
Identities = 43/195 (22%), Positives = 74/195 (37%), Gaps = 24/195 (12%)
Query: 668 KLTPLLSVRESLSEEEAQKM---GRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGP 724
K +P+ + + EEE +K G+++ E+E E + +E G +K S +K +G
Sbjct: 133 KKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEK---EGSSEKEEGE 189
Query: 725 --------EFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQIL 776
E + K +K+EE +EVA + DAK + K P P +
Sbjct: 190 QEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 249
Query: 777 PPGLTPGLPYPH--QTPQGLMPYGQ------PRPPILGYGAGAV--RPAVPTGGPPYPHA 826
P P ++P P + P+ P+ G V P P P +
Sbjct: 250 GKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKS 309
Query: 827 PYGAGRGNYDAFRGQ 841
P + + +G+
Sbjct: 310 PVEEAKSKAEVGKGE 324
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA 315
K + E D E EE++E + + + +A A E + ++ DE ED
Sbjct: 142 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201
Query: 316 ENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE 375
E D S ++ + + G K K + AK ++ + + +D D+ + + + E
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVK--AKNVAEDEDEEEDDEDEDDDDDEDDEDDDDE 259
Query: 376 SGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT-----CSLFMRNIAPN 430
EEE+EE E KE P + + E K A E K + + T +LF+ N+ N
Sbjct: 260 DD--EEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFN 317
Query: 431 ISRAEI 436
S E+
Sbjct: 318 KSAPEL 323
Score = 53.1 bits (126), Expect = 1e-06
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 275 EQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDK 334
++ PG+ G+ GA + K N K+ KKED + E+D S +D+ E D D+
Sbjct: 109 KKGATPGKALVATPGKKGAAIPAKGAK-NGKNAKKEDSDEEEDDDSEEDE----EDDEDE 163
Query: 335 EEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEK 394
+E +++ E A K++ DD DE E + + E +EEE E K K+
Sbjct: 164 DEDEDEIEPAAMKAAAAAPASEDEDDEDDED--DEDDDDDEEDDSEEEAMETTPAKGKKA 221
Query: 395 PK 396
K
Sbjct: 222 AK 223
Score = 30.0 bits (66), Expect = 9.8
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 289 GRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKS 348
G+ GA G T K K A+N + KK + D EE+ +DSE++ +
Sbjct: 108 GKKGATPGKALVATPGKKGAAIPAKGAKNGKN----AKKEDSD---EEEDDDSEEDEEDD 160
Query: 349 SKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAG 408
+ + + + + + + SE E + +E+ E+ + ++E EEE + A G
Sbjct: 161 EDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDD--DDEEDDSEEEAMETTPAKG 218
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 55.5 bits (132), Expect = 2e-07
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 251 DAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKE 310
+ A + EG T+ + ++E +E EE+A E + E +GE + +D
Sbjct: 1944 EEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDV--- 2000
Query: 311 DGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSES 370
+ +AE + ++ + E DG + + K SE E + + +K GD + V
Sbjct: 2001 EAPEAEGEMQEAEEEAQPESDGVEAQPK--SEGEEAQEVEGETQKTEGDAQPESDGVEAP 2058
Query: 371 ESESESGQAEEEKEEAEALKEKEK----PKEEEWEKPKDAAGLE 410
E+E E+ +AE E +EAE E +E E E ++ G+E
Sbjct: 2059 EAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVE 2102
Score = 47.0 bits (110), Expect = 8e-05
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 274 EEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGD 333
+E+ GK + E AG+ LG+ E++ E+ E G Q N + GD D
Sbjct: 1770 QEREGK----THNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQD 1825
Query: 334 KEEKKEDSEKEAKKSSKKRNRKHSGDDSFD-EGSVSESES----ESESGQAEEEKEEAEA 388
+ EA ++ + + G ++ + EG E+E ESE +A E + EA+
Sbjct: 1826 PGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQP 1885
Query: 389 LKEKEKPKEEEWEKPKDAAGLE 410
E + E EWE ++ G E
Sbjct: 1886 ESEDVETPEAEWEVQPESEGAE 1907
Score = 46.6 bits (109), Expect = 1e-04
Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGK-Q 314
++EG T+ + E + +A + E +++ EG G+ ++ D D ++ +G+ Q
Sbjct: 2036 EVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQ 2095
Query: 315 AENDSSN----DDKTKKSEG----DGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGS 366
E++ + + +K+EG + + E + E EA ++ + + G ++ D +
Sbjct: 2096 PESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQD--A 2153
Query: 367 VSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLE 410
E++ ESE +A+E +EEA+ E + E E E ++ G+E
Sbjct: 2154 EGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIE 2197
Score = 44.3 bits (103), Expect = 5e-04
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKS 328
E + E E P + + GA + E++ + E E + D + +
Sbjct: 1882 EAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQ 1941
Query: 329 EGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFD-EGSVSESESESESGQAEEEKEEAE 387
E + +E + ++ E++ + + + +S D E E E++ G+A+ E E+ E
Sbjct: 1942 EAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVE 2001
Query: 388 ALKEKEKPKEEEWEKPKDAAGLECKPR 414
A + + + +E E E ++ G+E +P+
Sbjct: 2002 APEAEGEMQEAEEEAQPESDGVEAQPK 2028
Score = 43.5 bits (101), Expect = 9e-04
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Query: 251 DAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGD---GERKTN-DKD 306
DA + EG T N E E + G + E G G+G D GE D+D
Sbjct: 1766 DAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQD 1825
Query: 307 EKKEDGKQA-ENDSSNDDKTKKSEG------DGDKEEKKEDSEKEAKKSSKKRNRKHSGD 359
+ DG + E + + +SEG +GD +E + +++ E++ +
Sbjct: 1826 PGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQP 1885
Query: 360 DSFDEGSVS---ESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECK 412
+S D + E + ESE +A E ++EA+ E + E E E ++ G E +
Sbjct: 1886 ESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQ 1941
Score = 43.1 bits (100), Expect = 0.001
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA----EN 317
E +++ E+E + E G +P K EG + +KT + + DG +A E
Sbjct: 2006 EGEMQEAEEEAQPESDGVEAQP--KSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEE 2063
Query: 318 DSSNDDKTKKSEGDGDKEEKKEDSEK---EAKKSSKKRNRKHS-GDDSFDEG-----SVS 368
+ + +++EG+ E + D+++ EA+ S+ + G+ EG +
Sbjct: 2064 AQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEG 2123
Query: 369 ESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECK 412
E++ ESE +A E + EA+ E + ++ E E ++ G+E +
Sbjct: 2124 EAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQ 2167
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 268 LEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKK 327
+E E E +A E + E A +GE + +D + + + S D +T +
Sbjct: 1835 IEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPE 1894
Query: 328 SEGDGDKEEK---KEDSEKEAKKSSKKRNRKHS-GDDSFDEGSVSESESESESGQAEEEK 383
+E + E + ++EKEA+ ++ + G+D + E+E + +AE +
Sbjct: 1895 AEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQT 1954
Query: 384 EEAEALKEKEKPKEEEWEKPKDAAGLE 410
+ + E ++ +EE + +D LE
Sbjct: 1955 QPESEVIESQEAEEEAQPESEDVEALE 1981
Score = 40.4 bits (93), Expect = 0.007
Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 239 DIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRA-----GA 293
D++ +A +M +A + E E+D + + E E+A + ++K EG A G
Sbjct: 1999 DVEAPEAEGEMQEA---EEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGV 2055
Query: 294 GLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEE---KKEDSEKEAKKSSK 350
+ E + + + + ++ + + S D +++EG+ E + ++E EA+K+
Sbjct: 2056 EAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEG 2115
Query: 351 KRNRKHSGDDSFDEGSV------SESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPK 404
+ G+ + + E++ ESE +A++ + EA+ E + +E E E
Sbjct: 2116 IEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQP 2175
Query: 405 DAAGLE 410
+ G+E
Sbjct: 2176 ELEGVE 2181
Score = 40.4 bits (93), Expect = 0.007
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 269 EQEEEEEQAGKPG---EPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQA----ENDSSN 321
E +E EE+A E K EG + +KT + + DG +A E
Sbjct: 2008 EMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEA 2067
Query: 322 DDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSES-ESESESGQAE 380
+ + +++EG+ E + D++ EA+ ++ + ++ E +E E+ G+A+
Sbjct: 2068 EGEVQEAEGEAHPESEDVDAQ-EAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQ 2126
Query: 381 EEKEEAEALK-EKEKPKEEEWEKPKDAAGLECKP 413
E E EA + E E E E + +DA G E +P
Sbjct: 2127 PESEGIEAPEAEGEAQPESEGVEAQDAEG-EAQP 2159
Score = 39.7 bits (91), Expect = 0.012
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 238 LDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGD 297
++ +A+ + + V + EG + ++ +E E +A E + E A +
Sbjct: 2055 VEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAE 2114
Query: 298 GERKTNDKDEKKEDGKQAENDSSNDDKTKKSEG----DGDKEEKKEDSEKEAKKSSKKRN 353
G + E + + + E + + +SEG D + E + E EA+++ ++
Sbjct: 2115 GIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQ 2174
Query: 354 RKHSGDDSFDEGSVSESESESESGQAEEEKEEAE-ALKEKEKPKEEEWEKPK 404
+ G ++ + + E++ ESE +A E + EA+ L+ E P+ EE +P+
Sbjct: 2175 PELEGVEAPE--AEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPE 2224
Score = 38.9 bits (89), Expect = 0.021
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEN 317
E + ++++ E +E E G E + EE + GL + + + E + +G+Q E
Sbjct: 1294 ENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEE 1353
Query: 318 DSSNDDKTKKSEGDGDK----EEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESE 373
+ + EG ++ EE KE E + + + K G +EGSV E
Sbjct: 1354 AQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGLKEEGLP--EEGSVHGQELS 1411
Query: 374 SESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRP 415
S + +E + ++E+E + +P A G E P
Sbjct: 1412 EASSPDGKGSQEDDPVQEEEAGRASASAEPCPAEGTEEPTEP 1453
Score = 37.4 bits (85), Expect = 0.061
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 273 EEEQAGKPGEPSKKE-EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGD 331
E +A K +P + E G + E + + E +E ++AE + + + +S+ +
Sbjct: 1907 EAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQ-E 1965
Query: 332 GDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE------E 385
++E + E + EA + + ++ G+ + V E+E E +AEEE + E
Sbjct: 1966 AEEEAQPESEDVEALEVEVE-TQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVE 2024
Query: 386 AEALKEKEKPKEEEWEKPK 404
A+ E E+ +E E E K
Sbjct: 2025 AQPKSEGEEAQEVEGETQK 2043
Score = 35.0 bits (79), Expect = 0.30
Identities = 29/145 (20%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 268 LEQEEEEEQAGKPGEPSKKEEGRAGA-GLGDGERKTNDKDEKKEDGK-QAENDSSNDDKT 325
LE E E+E + E + EE A G E + + E +E+ + ++E+ + + +
Sbjct: 1925 LETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEV 1984
Query: 326 KKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEE 385
+ E +G+ + + ED E + + + E++ ES+ +A+ + E
Sbjct: 1985 ETQEAEGEAQPESEDVEAPEAEGEMQEAEE-------------EAQPESDGVEAQPKSEG 2031
Query: 386 AEALKEKEKPKEEEWEKPKDAAGLE 410
EA + + + ++ E + ++ G+E
Sbjct: 2032 EEAQEVEGETQKTEGDAQPESDGVE 2056
Score = 33.9 bits (76), Expect = 0.68
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 14/164 (8%)
Query: 256 KMEGGTENDLRILEQEEEEEQAGKPGEPSKKEE--GRAGAGLGDGERKTNDKDEKKEDGK 313
K E G + + LE+ +E E G+ E ++ EE G GL + + + E E G
Sbjct: 1326 KTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGL 1385
Query: 314 QAEN-DSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESES 372
Q E + ++ EG +E E S + K S + DD E + +
Sbjct: 1386 QGEALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSQE--------DDPVQEEEAGRASA 1437
Query: 373 ESESGQAE---EEKEEAEALKEKEKPKEEEWEKPKDAAGLECKP 413
+E AE E E L E + E + GLE P
Sbjct: 1438 SAEPCPAEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEKPP 1481
Score = 33.9 bits (76), Expect = 0.68
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 26/141 (18%)
Query: 287 EEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAK 346
+EG G G +R DKD K + + + KT SE E + + E E
Sbjct: 1741 DEGEDGEG---SQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGI 1797
Query: 347 KSSKKRNRKHSGDDSFDEGSVS-----------------------ESESESESGQAEEEK 383
+ + SG + +G + E++ ESE +A E +
Sbjct: 1798 SERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAE 1857
Query: 384 EEAEALKEKEKPKEEEWEKPK 404
+A+ + + +P+ E+ E P+
Sbjct: 1858 GDAQEAEGEAQPESEDVEAPE 1878
Score = 30.4 bits (67), Expect = 7.5
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 291 AGAGLGDGERKTNDKDEKKEDGKQAEN-DSSNDDKTKKSEGDG---DKEEKKEDSEKEAK 346
A GLG G + DE EDG+ ++ + D K ++EGD ++E K +SE A
Sbjct: 1726 AEGGLGPGLSQGPGVDEG-EDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAG 1784
Query: 347 KSSKKRNRKHSG----DDSFDEGSVSESESESESGQ-AEEEKEEAEALKEKEKPKEEEWE 401
+ ++ G ++ +GS E + E+ +++ +++ + E P E E E
Sbjct: 1785 SELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAP-EAEGE 1843
Query: 402 KPKDAAGLE 410
++ G+E
Sbjct: 1844 AQPESEGVE 1852
>gi|83921609 hypothetical protein LOC127254 [Homo sapiens]
Length = 1530
Score = 55.1 bits (131), Expect = 3e-07
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 257 MEGGTENDLRILEQEE----EEEQAGKPGEPSKKEEGRAGAGL-GDGERKTNDKDEKKED 311
+E EN L+ +E+ EE+Q K EEG+A + G + +DK + +
Sbjct: 486 LEDDQENTLKYEYEEDFEVDEEKQGEK-----SNEEGQADVQMNGIPQSPLDDKKDNLDP 540
Query: 312 GKQAENDSSNDDKTK---KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHS-GDDSFDEGSV 367
K++E S + K E DG E + E+ +++ K +S +R H DS DE +V
Sbjct: 541 EKESETSSQKAPDARDNVKDENDGCSESELEEDKQDMKTASSTSSRSHPYSSDSEDESAV 600
Query: 368 SESESESESGQAEE-EKEEAEALKEKEKPKE-----------EEWEKPKDAAGLECKPRP 415
+ E+ ++S E + ++ L E +KP++ E ++ A +E KP P
Sbjct: 601 GDREAHTDSSTDESARRSSSQELSENDKPRKSHLPIEESLEIEIEDQEITKADVETKPMP 660
Query: 416 LHKT 419
+ ++
Sbjct: 661 IDES 664
Score = 36.6 bits (83), Expect = 0.10
Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 33/187 (17%)
Query: 247 VKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEP--------SKKEEGRAGAGLGDG 298
V L A EG E + + + E EE+A E SK+E+G A LG G
Sbjct: 919 VAALREAATSEEGEAEGGVAVSDVGESEEEASIDLEDTGPMEDTASKREDGSEEAILG-G 977
Query: 299 ERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEK---------KEDSEKEAKKSS 349
E ++ E + + + ++ +G EE KED E E +
Sbjct: 978 EEPAKERKEVMRTETRLSPFTGEAEASRMQVSEGSPEEGSLAKEAFLCKEDVEGEEMVTE 1037
Query: 350 KKRNRKHSGDDSFDEG---------------SVSESESESESGQAEEEKEEAEALKEKEK 394
+ NR+ + + S+ +++SE E ++ +A KE++K
Sbjct: 1038 AEANREDDRKEILPKELDLARERRKAERPKTSLRKTDSEREEVTRANALKDEDAFKEEQK 1097
Query: 395 PKEEEWE 401
K EE E
Sbjct: 1098 LKAEEGE 1104
Score = 32.3 bits (72), Expect = 2.0
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 241 DKADAIVKMLDAAVIKMEGGT-ENDLRILEQEEEEEQAGKP--GEPSKKEEGRAGAGLGD 297
D+ + + K LD A + + + LR + E EE E + KEE + A G+
Sbjct: 1045 DRKEILPKELDLARERRKAERPKTSLRKTDSEREEVTRANALKDEDAFKEEQKLKAEEGE 1104
Query: 298 GERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEA-----------K 346
E + ++E K + +D+ N+ + SE + EDS KE +
Sbjct: 1105 TETEVRAEEETKAPPNEMGSDAENEAPVEASELSDNPGLLGEDSLKETVVPIFEATPGFE 1164
Query: 347 KSSKKRN--RKHSGDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEE 398
KS + RK G + +SE+ + E E ALKE + E
Sbjct: 1165 KSLENITALRKEGGGE-----RLSEARDTEHKDREELSSRENRALKEGHRQDGE 1213
Score = 30.8 bits (68), Expect = 5.7
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 16/151 (10%)
Query: 258 EGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAEN 317
+GG + LR E EE+ P E+ R E ++ E++ED +
Sbjct: 1261 QGGVDVVLRTQEAVAEED-------PIMAEKFR--------EEAVDEDPEEEEDKECTLE 1305
Query: 318 DSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESG 377
+ D+ + +GD + E + +E H G ++ E + E E + S
Sbjct: 1306 TEAMQDRNSEGDGDMEGEGNTQKNEGMGGGRVVAVEVLHGGGET-AETAAEEREVLAGSE 1364
Query: 378 QAEEEKEEAEALKEKEKPKEEEWEKPKDAAG 408
AEE+ +A + +EE W + + G
Sbjct: 1365 TAEEKTIANKASSFSDVAEEETWHQQDELVG 1395
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 54.7 bits (130), Expect = 4e-07
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329
+EE+++++ + E SKK + + +RK E + +E DSS++D ++++
Sbjct: 179 EEEKKKKSSRSKERSKKRRKKKSS-----KRKHKKYSEDSDSDSDSETDSSDEDNKRRAK 233
Query: 330 GDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEAL 389
KE+KK+ K+ KK K++RK S D S E S+ E + + EE L
Sbjct: 234 KAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKE---SQEEFLENPWKDRTKAEEPSDL 290
Query: 390 KEKEKPK 396
E PK
Sbjct: 291 IGPEAPK 297
Score = 53.9 bits (128), Expect = 6e-07
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 260 GTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTN---DKDE----KKEDG 312
G++ L +E EE + ++ G GA G N D DE + E+
Sbjct: 109 GSDKPWPSLLDKEREESLRQKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEP 168
Query: 313 KQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESES 372
K++ +S ++ KK + KE K+ + KKSSK++++K+S E S S+S+S
Sbjct: 169 KKSTTSASTSEEEKKKKSSRSKERSKK---RRKKKSSKRKHKKYS------EDSDSDSDS 219
Query: 373 ESESGQAEEEKEEAEALKEKEKPKEEEWEKPK 404
E++S E+ K A+ K+KEK K+ +K K
Sbjct: 220 ETDSSD-EDNKRRAKKAKKKEKKKKHRSKKYK 250
Score = 52.8 bits (125), Expect = 1e-06
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 8/144 (5%)
Query: 272 EEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE-- 329
E + P E + ++ A + E+K K+ K+ + SS K SE
Sbjct: 154 EPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDS 213
Query: 330 ---GDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEA 386
D + + ED+++ AKK+ KK +K + + +S ES ++E +EE
Sbjct: 214 DSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEF 273
Query: 387 EALKEKEKPKEEEWEKPKDAAGLE 410
K++ K EE P D G E
Sbjct: 274 LENPWKDRTKAEE---PSDLIGPE 294
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 54.7 bits (130), Expect = 4e-07
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 30/240 (12%)
Query: 161 DSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNR 220
D +TE+ + D R+ +D KD++ +K +P+ +A+ A +
Sbjct: 325 DVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDS 384
Query: 221 LRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKP 280
L K D K DA I +E++L E +++E++ K
Sbjct: 385 RN--------------LKKASKNDD--KKKDAKKITFSTDSESELESKESQKDEKKDKKD 428
Query: 281 GEPSKKEEGRAGAGLGDGERKTNDKDEK-KEDGKQAENDSSNDDKTK-------KSEGDG 332
+ K+ + D + + +K K+D K+ + DS DDK K +E +
Sbjct: 429 SKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMES 488
Query: 333 DKEEKKEDSEKEAKKSSKK------RNRKHSGDDSFDEGSVSESESESESGQAEEEKEEA 386
D E KK+ + KK SKK R S D FDE S + ++ ++ ++ E EE+
Sbjct: 489 DLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEES 548
Score = 53.9 bits (128), Expect = 6e-07
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 265 LRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDK 324
LR Q + + K + +KK+ + D E + D + K+D K+ + + DDK
Sbjct: 265 LRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAE--SEDSKDAKKDSKKVKKNVKKDDK 322
Query: 325 TKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE 384
K + D + + + K+ +K +KK +K DD + +++ESG A++ +
Sbjct: 323 KKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARN 382
Query: 385 EAEALKEKEKPKEEEWEKPK 404
++ LK+ K +++ + K
Sbjct: 383 DSRNLKKASKNDDKKKDAKK 402
Score = 52.4 bits (124), Expect = 2e-06
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 261 TENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSS 320
T+ D + L+++++++ K E + E G D + ND K K ++ND
Sbjct: 347 TKKDKKKLKKDDKKKDTKKYPESTDTESG-------DAKDARNDSRNLK---KASKNDDK 396
Query: 321 NDDKTK-----KSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESE 375
D K SE + + +E ++D EK+ KK SK N+K +D + SE + +S+
Sbjct: 397 KKDAKKITFSTDSESELESKESQKD-EKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSK 455
Query: 376 SGQAEEEKEEAEALK-EKEKPKEEEWEKPKDAAGLECKPRPLH 417
G+ +E+K + ++ K +K+K ++ E + + LE K H
Sbjct: 456 KGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKH 498
Score = 51.2 bits (121), Expect = 4e-06
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 263 NDLRILEQEEEEEQAGKPGEP---SKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDS 319
ND R L++ + + K + S E + + K + KD K ++ K +ND
Sbjct: 382 NDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDE 441
Query: 320 SNDDKTKKSEGD---GDKEEKK--EDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESES 374
+ D + +GD G K+EKK +DS+K+ KK K+N + + +S E + S+
Sbjct: 442 ESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKE 501
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWEK 402
+ G ++ K++A E + +E K
Sbjct: 502 KKGSKKDIKKDARKDTESTDAEFDESSK 529
Score = 50.8 bits (120), Expect = 5e-06
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 269 EQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDS---SNDDKT 325
E E E +++ K + KK+ KT++K K D + + DS + K
Sbjct: 410 ESELESKESQKDEKKDKKDS------------KTDNKKSVKNDEESTDADSEPKGDSKKG 457
Query: 326 KKSEGDGDKEEKKEDSEKEAKKSSK----------KRNRKHSGDDSFDEGSV-SESESES 374
KK E G K+ KK+D +K+AKK+++ K+++KHS + + + ++ ++
Sbjct: 458 KKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKDT 517
Query: 375 ESGQAEEEKEEAEALKEKEKPKEEEWE 401
ES AE ++ K K K + E
Sbjct: 518 ESTDAEFDESSKTGFKTSTKIKGSDTE 544
Score = 45.8 bits (107), Expect = 2e-04
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 27/158 (17%)
Query: 271 EEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQ------AENDSSNDDK 324
+++ ++ K ++ E+ + +K KD+KK+D K+ AE+ S D++
Sbjct: 285 KKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER 344
Query: 325 --TKKSEGDGDKEEKKEDSE-------------KEAKKSSKKRNRKHSGDDSFDE----- 364
TKK + K++KK+D++ K+A+ S+ + DD +
Sbjct: 345 KDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKIT 404
Query: 365 -GSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWE 401
+ SESE ES+ Q +E+K++ ++ + +K + + E
Sbjct: 405 FSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEE 442
Score = 42.0 bits (97), Expect = 0.002
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 279 KPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN---DDKTKKSEGDGDKE 335
K E K ++ + G L KD KK+ G A N S ++KTK+ + + DK
Sbjct: 111 KKAEYKKSKDEKGGTPL--------KKDSKKKGGSYATNPESKQIVEEKTKR-QNEADKT 161
Query: 336 EKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKE-EAEALKEKEK 394
K E E K SK + + +S + +VS++ S+ + ++ K+ E L K
Sbjct: 162 PLKSSHENEQSKKSK--SSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNN 219
Query: 395 PKEEEWEKPKDAAGLECKPRPLHKTCS 421
PK KD + P+ + CS
Sbjct: 220 PK-------KDLKRSKTSNDPISEICS 239
Score = 30.0 bits (66), Expect = 9.8
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 299 ERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKK-EDSEKEAKKSSKKRNRKHS 357
E+K + KD KK+ K E+ + D++ K+ G K K + S+ E+++S K K
Sbjct: 501 EKKGSKKDIKKDARKDTESTDAEFDESSKT---GFKTSTKIKGSDTESEESLYKPGAKKK 557
Query: 358 GDDSFDEGSVSESESESESGQAEEEKEEAEALKEKEKPKEEEWEKPKDAAGLECKPRPLH 417
D+S +G+ + S+ E E + + K+ E+ EK + +P
Sbjct: 558 IDES--DGTSANSKMEG------LESKRGFRMSSKKTTFNEKGEKASTGRVPPSREKPPL 609
Query: 418 KTCSLFMRNIAPNISRAEIISLC 440
C P++ ++ LC
Sbjct: 610 PACE-------PSLPSPKVRRLC 625
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,605,221
Number of Sequences: 37866
Number of extensions: 2709115
Number of successful extensions: 43633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 1223
Number of HSP's that attempted gapping in prelim test: 15573
Number of HSP's gapped (non-prelim): 15294
length of query: 875
length of database: 18,247,518
effective HSP length: 111
effective length of query: 764
effective length of database: 14,044,392
effective search space: 10729915488
effective search space used: 10729915488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.