Guide to the Human Genome
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Name: WDFY3 Sequence: fasta or formatted (795aa) NCBI GI: 31317268
Description:

WD repeat and FYVE domain containing 3 isoform 2

Referenced in:

WD Repeat Proteins
Zinc Finger Proteins

Other entries for this name:
alt prot [281aa] WD repeat and FYVE domain containing 3 isoform 3
alt prot [3526aa] WD repeat and FYVE domain containing 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         52           2
 C cysteine            2.3         18           1
 D aspartate           3.9         31           3
 E glutamate           6.3         50           2
 F phenylalanine       5.3         42           2
 G glycine             4.2         33           2
 H histidine           2.4         19           1
 I isoleucine          4.4         35           2
 K lysine              5.4         43           1
 L leucine            13.3        106           3
 M methionine          3.3         26           2
 N asparagine          4.4         35           2
 P proline             4.3         34           2
 Q glutamine           5.2         41           2
 R arginine            4.8         38           3
 S serine              8.3         66           4
 T threonine           5.7         45           2
 V valine              6.9         55           2
 W tryptophan          0.6          5           1
 Y tyrosine            2.6         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat and FYVE domain containing 3 isoform 2 [Ho... 
WDFY3                 0.983   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
WDFY4                 0.176   WDFY family member 4 
KIAA1429              0.005   hypothetical protein LOC25962 isoform 1 
URG4                  0.003   up-regulated gene 4 isoform 2 
URG4                  0.003   up-regulated gene 4 isoform 1 
URG4                  0.003   up-regulated gene 4 isoform 3 
NOMO2                 0.003   nodal modulator 2 isoform 2 
NOMO2                 0.003   nodal modulator 2 isoform 1 
NOMO3                 0.003   nodal modulator 3 
ZFYVE1                0.003   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
NOMO1                 0.003   nodal modulator 1 
ZFYVE1                0.003   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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