Search of human proteins with 190341072

Search of human proteins with 190341072

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
         (727 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]             1476   0.0  
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]             1476   0.0  
gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens]             77   4e-14
gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]             77   4e-14
gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens]               77   4e-14
gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]              77   6e-14
gi|67191208 ubiquitin C [Homo sapiens]                                 73   1e-12
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s...    73   1e-12
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ...    73   1e-12
gi|11024714 ubiquitin B precursor [Homo sapiens]                       72   1e-12
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom...    72   1e-12
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ...    72   1e-12
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]           56   1e-07
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]           56   1e-07
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]           56   1e-07
gi|5453760 neural precursor cell expressed, developmentally down...    56   1e-07
gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]              49   2e-05
gi|44662819 ubiquitin-like 4B [Homo sapiens]                           40   0.010
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...    36   0.14 
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...    36   0.14 
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s...    36   0.14 
gi|58761508 midnolin [Homo sapiens]                                    36   0.14 
gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]             35   0.19 
gi|7657667 ubiquitin-like 4 [Homo sapiens]                             35   0.32 
gi|45387945 family with sequence similarity 62 (C2 domain contai...    34   0.42 
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    33   1.2  
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   1.2  
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   1.2  
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    33   1.2  
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor...    33   1.2  

>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
          Length = 727

 Score = 1476 bits (3821), Expect = 0.0
 Identities = 727/727 (100%), Positives = 727/727 (100%)

Query: 1   MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL 60
           MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL
Sbjct: 1   MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL 60

Query: 61  EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA 120
           EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA
Sbjct: 61  EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA 120

Query: 121 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV 180
           EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV
Sbjct: 121 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV 180

Query: 181 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP 240
           LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP
Sbjct: 181 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP 240

Query: 241 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA 300
           KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA
Sbjct: 241 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA 300

Query: 301 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG 360
           TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG
Sbjct: 301 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG 360

Query: 361 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC 420
           SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC
Sbjct: 361 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC 420

Query: 421 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP 480
           KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP
Sbjct: 421 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP 480

Query: 481 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV 540
           MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV
Sbjct: 481 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV 540

Query: 541 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST 600
           ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST
Sbjct: 541 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST 600

Query: 601 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK 660
           NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK
Sbjct: 601 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK 660

Query: 661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN 720
           KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN
Sbjct: 661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN 720

Query: 721 APKLPKI 727
           APKLPKI
Sbjct: 721 APKLPKI 727


>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
          Length = 727

 Score = 1476 bits (3821), Expect = 0.0
 Identities = 727/727 (100%), Positives = 727/727 (100%)

Query: 1   MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL 60
           MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL
Sbjct: 1   MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL 60

Query: 61  EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA 120
           EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA
Sbjct: 61  EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA 120

Query: 121 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV 180
           EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV
Sbjct: 121 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV 180

Query: 181 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP 240
           LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP
Sbjct: 181 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP 240

Query: 241 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA 300
           KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA
Sbjct: 241 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA 300

Query: 301 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG 360
           TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG
Sbjct: 301 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG 360

Query: 361 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC 420
           SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC
Sbjct: 361 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC 420

Query: 421 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP 480
           KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP
Sbjct: 421 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP 480

Query: 481 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV 540
           MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV
Sbjct: 481 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV 540

Query: 541 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST 600
           ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST
Sbjct: 541 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST 600

Query: 601 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK 660
           NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK
Sbjct: 601 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK 660

Query: 661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN 720
           KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN
Sbjct: 661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN 720

Query: 721 APKLPKI 727
           APKLPKI
Sbjct: 721 APKLPKI 727


>gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens]
          Length = 213

 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 654 KAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLH 713
           KAP   K K  N CF+C KK GL + ++CRCGN FC  HRY++ H C YDYK+     + 
Sbjct: 142 KAPELPKPKK-NRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIR 199

Query: 714 EANPVVNAPKLPKI 727
           + NPVV A K+ +I
Sbjct: 200 KENPVVVAEKIQRI 213


>gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]
          Length = 213

 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 654 KAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLH 713
           KAP   K K  N CF+C KK GL + ++CRCGN FC  HRY++ H C YDYK+     + 
Sbjct: 142 KAPELPKPKK-NRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIR 199

Query: 714 EANPVVNAPKLPKI 727
           + NPVV A K+ +I
Sbjct: 200 KENPVVVAEKIQRI 213


>gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens]
          Length = 213

 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 654 KAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLH 713
           KAP   K K  N CF+C KK GL + ++CRCGN FC  HRY++ H C YDYK+     + 
Sbjct: 142 KAPELPKPKK-NRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIR 199

Query: 714 EANPVVNAPKLPKI 727
           + NPVV A K+ +I
Sbjct: 200 KENPVVVAEKIQRI 213


>gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
          Length = 208

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)

Query: 657 LQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEAN 716
           L+  K+  N CF+C KK GL + +ECRCGN +C  HRY++ H C+Y+YK+     + + N
Sbjct: 139 LEKPKQKKNRCFMCRKKVGL-TGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKEN 197

Query: 717 PVVNAPKLPKI 727
           PVV   K+ KI
Sbjct: 198 PVVVGEKIQKI 208


>gi|67191208 ubiquitin C [Homo sapiens]
          Length = 685

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYN 212

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 441 IQKESTLHLVLRLRGG 456



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 669 IQKESTLHLVLRLRGG 684


>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
           sapiens]
          Length = 128

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 53/78 (67%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGGPI 105
           I +  TL LVL +RGG I
Sbjct: 61  IQKESTLHLVLRLRGGII 78


>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
           sapiens]
          Length = 128

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 53/78 (67%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGGPI 105
           I +  TL LVL +RGG I
Sbjct: 61  IQKESTLHLVLRLRGGII 78


>gi|11024714 ubiquitin B precursor [Homo sapiens]
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
           sapiens]
          Length = 156

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
           sapiens]
          Length = 156

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 52/76 (68%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M++F++TLTG    L V P +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 88  ISEGCTLKLVLAMRGG 103
           I +  TL LVL +RGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           +++F++TL G    L V P + + +VKAKI+  EGIP  +Q LI+   +LE+   L+D N
Sbjct: 69  LQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCN 128

Query: 88  ISEGCTLKLVLAMRG 102
           I +  TL L+L + G
Sbjct: 129 IQKEPTLHLLLRLCG 143


>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           +++F++TL G    L V P + + +VKAKI+  EGIP  +Q LI+   +LE+   L+D N
Sbjct: 69  LQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCN 128

Query: 88  ISEGCTLKLVLAMRG 102
           I +  TL L+L + G
Sbjct: 129 IQKEPTLHLLLRLCG 143


>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           +++F++TL G    L V P + + +VKAKI+  EGIP  +Q LI+   +LE+   L+D N
Sbjct: 69  LQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCN 128

Query: 88  ISEGCTLKLVLAMRG 102
           I +  TL L+L + G
Sbjct: 129 IQKEPTLHLLLRLCG 143


>gi|5453760 neural precursor cell expressed, developmentally
           down-regulated 8 [Homo sapiens]
          Length = 81

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 28/76 (36%), Positives = 45/76 (59%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M + ++TLTG   E+ + P + V  +K ++   EGIP  +Q LI++  ++ ++    DY 
Sbjct: 1   MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 60

Query: 88  ISEGCTLKLVLAMRGG 103
           I  G  L LVLA+RGG
Sbjct: 61  ILGGSVLHLVLALRGG 76


>gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]
          Length = 227

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 658 QTKKKTTNHCFLCGKKTGLASSY--ECRCGNNFCASHRYAETHGCTYDYKSAGR 709
           ++K+K+   CF C  K  L       CRCG  FC  HR  E H CT+D+   GR
Sbjct: 148 RSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGR 201


>gi|44662819 ubiquitin-like 4B [Homo sapiens]
          Length = 174

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 22/71 (30%), Positives = 40/71 (56%)

Query: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
          M L ++ L G    L+VS  E+V ++K  + R   +P  +QHL++    LE+D  L+DY 
Sbjct: 1  MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYC 60

Query: 88 ISEGCTLKLVL 98
          I    ++ +++
Sbjct: 61 IGPNASINVIM 71


>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
           sapiens]
          Length = 728

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 22/90 (24%), Positives = 39/90 (43%)

Query: 14  NMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWN 73
           N GP   ++   +  +     L G      +   + V  +K KI    G+P  +Q L + 
Sbjct: 636 NKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYE 695

Query: 74  NMELENDYCLNDYNISEGCTLKLVLAMRGG 103
            + +++   L  YN++ G  + L L  RGG
Sbjct: 696 GIFIKDSNSLAYYNMANGAVIHLALKERGG 725


>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
           sapiens]
          Length = 793

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 22/90 (24%), Positives = 39/90 (43%)

Query: 14  NMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWN 73
           N GP   ++   +  +     L G      +   + V  +K KI    G+P  +Q L + 
Sbjct: 701 NKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYE 760

Query: 74  NMELENDYCLNDYNISEGCTLKLVLAMRGG 103
            + +++   L  YN++ G  + L L  RGG
Sbjct: 761 GIFIKDSNSLAYYNMANGAVIHLALKERGG 790


>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
           sapiens]
          Length = 865

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 30/186 (16%)

Query: 406 EGNADEQSSGLEGACKVNLELLLTNADKGLK-APEQHLKHVAGVLNGESVETSVLNYREL 464
           E  A   S G    C   L L L +  K L+ + ++H KH    L   S+ T V   ++ 
Sbjct: 536 EETAVPTSQGTGTPC---LTLCLASPSKSLEMSHDEHKKHSHTNL---SISTGVTKLKKT 589

Query: 465 SPHKNRLL---------SPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNI 515
              K+R L         + L      +L +S++   R+ K  E G L+ S S  L+++N 
Sbjct: 590 EEKKHRTLHTEELTSKEADLTEETEENLRSSVINSIREIK-EEIGNLKSSHSGVLEIENS 648

Query: 516 TDSSFSRTTCFQGVKVDSLGKR------------SDVISKVEARDITEMTNKASKEPVGC 563
            D   SR    +  ++DSL  +              +ISK   RDI E +   +   +G 
Sbjct: 649 VDDLSSRMDILE-ERIDSLEDQIEEFSKDTMQMTKQIISKERQRDIEERSRSCNIRLIGI 707

Query: 564 VNNISF 569
               S+
Sbjct: 708 PEKESY 713


>gi|58761508 midnolin [Homo sapiens]
          Length = 468

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 28  MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
           M L I + TGT ++L V P ETV  ++ ++ +   +P  R  L+  +  L +   L ++ 
Sbjct: 31  MSLAIHSTTGTRYDLAVPPDETVEGLRKRLSQRLKVPKERLALLHKDTRLSSGK-LQEFG 89

Query: 88  ISEGCTLKLVLAMRGGPINTRRVPTDDPLRKM 119
           + +G  L LV  +  G ++    P    ++ +
Sbjct: 90  VGDGSKLTLVPTVEAGLMSQASRPEQSVMQAL 121


>gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]
          Length = 257

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 656 PLQTKKKT-TNHCFLCGKKTGLASSYEC-RCGNNFCASHRYAETHGCT---YDYKSAGRR 710
           P Q K+K  TN C   G +        C RC  NFC  HR+   H C+   +    AG  
Sbjct: 88  PAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147

Query: 711 YLHEANPVVNAPKLP 725
            +  A  V +   +P
Sbjct: 148 AISRAQAVASTSTVP 162


>gi|7657667 ubiquitin-like 4 [Homo sapiens]
          Length = 157

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYN 87
          M+L ++ L G    L+V   E V ++K  +     +P+ +Q L++    L +   L+DY+
Sbjct: 1  MQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYS 60

Query: 88 ISEGCTLKLVL 98
          I     L LV+
Sbjct: 61 IGPNSKLNLVV 71


>gi|45387945 family with sequence similarity 62 (C2 domain
           containing) member B [Homo sapiens]
          Length = 893

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 229 AKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAF-GNAY 287
           A++K  ++SK+ +K   IK H   +P P   +TAPS        P IG S  P     A 
Sbjct: 642 AQVKRPSVSKEGRKT-SIKSHMSGSPGPGGSNTAPS-------TPVIGGSDKPGMEEKAQ 693

Query: 288 PPEISRNGISSLATQLSA 305
           PPE    G+  L    S+
Sbjct: 694 PPEAGPQGLHDLGRSSSS 711


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 72/342 (21%), Positives = 124/342 (36%), Gaps = 79/342 (23%)

Query: 250  PPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLATQLSAERYI 309
            P   P PS+GS  P+ H ++ V   +  S   + G+       R+  SSL+ Q S  R +
Sbjct: 2157 PGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLRSIGS------RRHSTSSLSPQRSKLRIM 2210

Query: 310  SSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLGSSLPRQTKH 369
            S      ++  N++  N +S  S+           +L +  ++ D VL      P  +  
Sbjct: 2211 SP-----MRTGNTYSRNNVSSVSTTGTA------TDLESSAKVVDHVLG-----PLNSST 2254

Query: 370  FLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGACKVNLELLLT 429
             LG   S++ N+          Q  +  VG+  S  +G++  +                 
Sbjct: 2255 SLGQNTSTSSNL----------QRTVVTVGNKNSHLDGSSSSEMK--------------- 2289

Query: 430  NADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAPMSLHNSLVK 489
                  ++    L   +  L GE  +T VL+ +      + +  P        +HN+  +
Sbjct: 2290 ------QSSASDLVSKSSSLKGE--KTKVLSSKSSEGSAHNVAYPGIPKLAPQVHNTTSR 2341

Query: 490  PERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDVISKVEARDI 549
                SK   F   +PSS            SFS         +   G+R+D   + +  D 
Sbjct: 2342 ELNVSKIGSFA--EPSS-----------VSFSSKEALSFPHLHLRGQRND---RDQHTDS 2385

Query: 550  TEMTNKASKEPV--------GCVNNISFLASLAGSTSRNRLQ 583
            T+  N +  E          G  N  S +    GS+SR+R Q
Sbjct: 2386 TQSANSSPDEDTEVKTLKLSGMSNRSSIINEHMGSSSRDRRQ 2427


>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 665  NHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKS 706
            +HC +CGK +   +S+   C N+FC  H+      CT D +S
Sbjct: 1283 HHCDVCGKPS---TSFCHLCPNSFCKEHQDGTAFSCTPDGRS 1321


>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 665  NHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKS 706
            +HC +CGK +   +S+   C N+FC  H+      CT D +S
Sbjct: 1283 HHCDVCGKPS---TSFCHLCPNSFCKEHQDGTAFSCTPDGRS 1321


>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 665  NHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKS 706
            +HC +CGK +   +S+   C N+FC  H+      CT D +S
Sbjct: 1283 HHCDVCGKPS---TSFCHLCPNSFCKEHQDGTAFSCTPDGRS 1321


>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 665  NHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKS 706
            +HC +CGK +   +S+   C N+FC  H+      CT D +S
Sbjct: 1283 HHCDVCGKPS---TSFCHLCPNSFCKEHQDGTAFSCTPDGRS 1321


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,721,651
Number of Sequences: 37866
Number of extensions: 1402865
Number of successful extensions: 3954
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3881
Number of HSP's gapped (non-prelim): 91
length of query: 727
length of database: 18,247,518
effective HSP length: 110
effective length of query: 617
effective length of database: 14,082,258
effective search space: 8688753186
effective search space used: 8688753186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.