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Search of human proteins with 18959204
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18959204 GIPC PDZ domain containing family, member 3 [Homo
sapiens]
(312 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18959204 GIPC PDZ domain containing family, member 3 [Homo sa... 616 e-177
gi|42544140 regulator of G-protein signalling 19 interacting pro... 390 e-109
gi|42544144 regulator of G-protein signalling 19 interacting pro... 390 e-109
gi|5031715 regulator of G-protein signalling 19 interacting prot... 390 e-109
gi|41393579 PDZ domain protein GIPC2 [Homo sapiens] 337 1e-92
gi|42544142 regulator of G-protein signalling 19 interacting pro... 316 2e-86
gi|42544146 regulator of G-protein signalling 19 interacting pro... 316 2e-86
gi|42544149 regulator of G-protein signalling 19 interacting pro... 316 2e-86
gi|186972120 calcium/calmodulin-dependent serine protein kinase ... 48 1e-05
gi|186700629 calcium/calmodulin-dependent serine protein kinase ... 43 3e-04
gi|186700627 calcium/calmodulin-dependent serine protein kinase ... 43 3e-04
gi|87196343 PDZ domain containing 2 [Homo sapiens] 42 5e-04
gi|148746189 multiple PDZ domain protein [Homo sapiens] 39 0.005
gi|66346708 membrane associated guanylate kinase, WW and PDZ dom... 38 0.013
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 38 0.013
gi|74272282 membrane associated guanylate kinase, WW and PDZ dom... 38 0.013
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 38 0.013
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 37 0.023
gi|223890252 glutamate receptor interacting protein 1 [Homo sapi... 36 0.038
gi|13994287 BTE-binding protein 4 [Homo sapiens] 35 0.11
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 35 0.11
gi|122937249 glutamate receptor interacting protein 2 [Homo sapi... 35 0.11
gi|169168434 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|113417342 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|113416881 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|112382257 InaD-like [Homo sapiens] 34 0.15
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 34 0.15
gi|45827729 scribble isoform b [Homo sapiens] 34 0.15
gi|45827731 scribble isoform a [Homo sapiens] 34 0.15
gi|74316006 CNKSR family member 3 [Homo sapiens] 34 0.15
>gi|18959204 GIPC PDZ domain containing family, member 3 [Homo
sapiens]
Length = 312
Score = 616 bits (1588), Expect = e-177
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRE 60
MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRE
Sbjct: 1 MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRE 60
Query: 61 LYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTED 120
LYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTED
Sbjct: 61 LYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTED 120
Query: 121 ALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLREL 180
ALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLREL
Sbjct: 121 ALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLREL 180
Query: 181 PKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFE 240
PKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFE
Sbjct: 181 PKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFE 240
Query: 241 EEASRKVDDLLESYMGIRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEV 300
EEASRKVDDLLESYMGIRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEV
Sbjct: 241 EEASRKVDDLLESYMGIRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEV 300
Query: 301 WAAIGEAREACG 312
WAAIGEAREACG
Sbjct: 301 WAAIGEAREACG 312
>gi|42544140 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 390 bits (1002), Expect = e-109
Identities = 193/287 (67%), Positives = 228/287 (79%)
Query: 22 PAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTL 81
P PP P RPRLVF TQLAHGSPTG+IEGFTNV+ELY KIAEAF + E++FCTL
Sbjct: 43 PQMGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTL 102
Query: 82 NSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKE 141
N+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFIKRIKE
Sbjct: 103 NTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKE 162
Query: 142 GSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIG 201
GS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++AFDMI
Sbjct: 163 GSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMIS 222
Query: 202 QRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPE 261
QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMGIRD E
Sbjct: 223 QRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTE 282
Query: 262 LASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
LA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 283 LAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|42544144 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 390 bits (1002), Expect = e-109
Identities = 193/287 (67%), Positives = 228/287 (79%)
Query: 22 PAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTL 81
P PP P RPRLVF TQLAHGSPTG+IEGFTNV+ELY KIAEAF + E++FCTL
Sbjct: 43 PQMGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTL 102
Query: 82 NSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKE 141
N+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFIKRIKE
Sbjct: 103 NTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKE 162
Query: 142 GSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIG 201
GS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++AFDMI
Sbjct: 163 GSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMIS 222
Query: 202 QRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPE 261
QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMGIRD E
Sbjct: 223 QRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTE 282
Query: 262 LASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
LA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 283 LAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|5031715 regulator of G-protein signalling 19 interacting protein
1 isoform 1 [Homo sapiens]
Length = 333
Score = 390 bits (1002), Expect = e-109
Identities = 193/287 (67%), Positives = 228/287 (79%)
Query: 22 PAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTL 81
P PP P RPRLVF TQLAHGSPTG+IEGFTNV+ELY KIAEAF + E++FCTL
Sbjct: 43 PQMGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTL 102
Query: 82 NSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKE 141
N+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFIKRIKE
Sbjct: 103 NTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKE 162
Query: 142 GSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIG 201
GS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++AFDMI
Sbjct: 163 GSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMIS 222
Query: 202 QRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPE 261
QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMGIRD E
Sbjct: 223 QRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTE 282
Query: 262 LASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
LA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 283 LAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 329
>gi|41393579 PDZ domain protein GIPC2 [Homo sapiens]
Length = 315
Score = 337 bits (863), Expect = 1e-92
Identities = 167/273 (61%), Positives = 216/273 (79%), Gaps = 2/273 (0%)
Query: 36 RLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQ 95
RLVF QLAHGS TG++EGF++++ELYA+IA AF I+P+EIL+CTLN+ K+DM++LLGGQ
Sbjct: 41 RLVFHAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQ 100
Query: 96 IGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGD 155
+GLEDFIFAHV+G KEV V K+ED+LGLTITDNG GYAFIKRIK+G +I+ ++ +CVGD
Sbjct: 101 LGLEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGD 160
Query: 156 SIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKV 215
IE+IN +IVG RHY+VAK L+EL K + FT++L++PK+AF+ I RS++ K E K+
Sbjct: 161 HIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFE-IELRSKAGKSSGE-KI 218
Query: 216 TSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPELASTMVETSKKTAS 275
GR TLRLRS G ATVEE PSE + +A K+DD+LE YMGIRD +LA+TM E K +
Sbjct: 219 GCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVN 278
Query: 276 AQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
EFA LD LG+FAFPDEFV +VW IG+A+
Sbjct: 279 PDEFAVALDETLGDFAFPDEFVFDVWGVIGDAK 311
>gi|42544142 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 316 bits (809), Expect = 2e-86
Identities = 156/232 (67%), Positives = 187/232 (80%)
Query: 77 LFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFI 136
+FCTLN+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 137 KRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRA 196
KRIKEGS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++A
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 197 FDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMG 256
FDMI QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 257 IRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
IRD ELA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|42544146 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 316 bits (809), Expect = 2e-86
Identities = 156/232 (67%), Positives = 187/232 (80%)
Query: 77 LFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFI 136
+FCTLN+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 137 KRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRA 196
KRIKEGS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++A
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 197 FDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMG 256
FDMI QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 257 IRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
IRD ELA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|42544149 regulator of G-protein signalling 19 interacting
protein 1 isoform 2 [Homo sapiens]
Length = 236
Score = 316 bits (809), Expect = 2e-86
Identities = 156/232 (67%), Positives = 187/232 (80%)
Query: 77 LFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFI 136
+FCTLN+HKVDM KLLGGQIGLEDFIFAHV+G+ KEVEV K+EDALGLTITDNGAGYAFI
Sbjct: 1 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFI 60
Query: 137 KRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRA 196
KRIKEGS+I+ I + VGD IEAIN S++GCRHYEVA++L+ELP+ + FTL+L +P++A
Sbjct: 61 KRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKA 120
Query: 197 FDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMG 256
FDMI QRS + ++ +GR TLRLRS G ATVE+ PS FEE+A KVDDLLESYMG
Sbjct: 121 FDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMG 180
Query: 257 IRDPELASTMVETSKKTASAQEFARCLDSVLGEFAFPDEFVVEVWAAIGEAR 308
IRD ELA+TMVE K + E A LD LG+FAFPDEFV +VW AIG+A+
Sbjct: 181 IRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAK 232
>gi|186972120 calcium/calmodulin-dependent serine protein kinase
isoform 1 [Homo sapiens]
Length = 921
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 118 TEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKML 177
T++ +G+T+ N + + RI G +I+R + VGD I IN S+ ++ KML
Sbjct: 497 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
Query: 178 RELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAPS 237
RE+ S F + + R++SS C ++ TS + S +V + PS
Sbjct: 557 REMRGSITFKI----------VPSYRTQSSSCERDSPSTSRQSPANGHSSTNNSVSDLPS 606
>gi|186700629 calcium/calmodulin-dependent serine protein kinase
isoform 3 [Homo sapiens]
Length = 897
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 118 TEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKML 177
T++ +G+T+ N + + RI G +I+R + VGD I IN S+ ++ KML
Sbjct: 491 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 550
Query: 178 RELPKSQPFTL 188
RE+ S F +
Sbjct: 551 REMRGSITFKI 561
>gi|186700627 calcium/calmodulin-dependent serine protein kinase
isoform 2 [Homo sapiens]
Length = 898
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 118 TEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKML 177
T++ +G+T+ N + + RI G +I+R + VGD I IN S+ ++ KML
Sbjct: 497 TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 556
Query: 178 RELPKSQPFTL 188
RE+ S F +
Sbjct: 557 REMRGSITFKI 567
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 42.4 bits (98), Expect = 5e-04
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 113 VEVTKTEDALGLTITDN-----GAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVG 167
VEV KT LGL++ G G IKR+ +G + + GD I AIN +VG
Sbjct: 2751 VEVLKTSAGLGLSLDGGKSSVTGDGPLVIKRVYKGGAAEQAGIIEAGDEILAINGKPLVG 2810
Query: 168 CRHYEVAKMLRELPK 182
H++ +++ +P+
Sbjct: 2811 LMHFDAWNIMKSVPE 2825
Score = 38.9 bits (89), Expect = 0.006
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 108 GETKEVEVTKTEDALGLTITDNGAGYA------FIKRIKEGSIINRIEAVCVGDSIEAIN 161
G ++E+ K D LG+ ++ G G + ++KEG +R + +GD + IN
Sbjct: 330 GRIWKMELLKESDGLGIQVS-GGRGSKRSPHAIVVTQVKEGGAAHRDGRLSLGDELLVIN 388
Query: 162 DHSIVGCRHYEVAKMLR 178
H +VG H E +LR
Sbjct: 389 GHLLVGLSHEEAVAILR 405
>gi|148746189 multiple PDZ domain protein [Homo sapiens]
Length = 2041
Score = 39.3 bits (90), Expect = 0.005
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 111 KEVEVTKTEDALGLTITDNGAGYAFIKR-IKEGSIINRIEAVCVGDSIEAINDHSIVGCR 169
+ + + K +LG+T++ N G I R I G I+R + +GD I +IN+ S +
Sbjct: 1007 RTINIAKGNSSLGMTVSANKDGLGMIVRSIIHGGAISRDGRIAIGDCILSINEESTISVT 1066
Query: 170 HYEVAKMLR 178
+ + MLR
Sbjct: 1067 NAQARAMLR 1075
Score = 38.5 bits (88), Expect = 0.008
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 11/172 (6%)
Query: 113 VEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYE 172
+E+ LG I A +K I G + ++ +C GD I I D + G +
Sbjct: 258 IELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQ 317
Query: 173 VAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATV 232
VA++LR+ V+ A I +R+ + + +S T LR +
Sbjct: 318 VAQVLRQCGNR-------VKLMIARGAIEERTAPTALGITLS-SSPTSTPELRVDASTQK 369
Query: 233 EEAPSEFEEEASRKVDDL---LESYMGIRDPELASTMVETSKKTASAQEFAR 281
E F+ E ++ V L + Y+G + E + V++ K+++ + R
Sbjct: 370 GEESETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGR 421
Score = 37.7 bits (86), Expect = 0.013
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 109 ETKEVEVTKTEDALGLTITDNGAGYA----------FIKRIKEGSIINRIEAVCVGDSIE 158
ET +VE+TK LG+TI AGY F+K I + S + + +GD I
Sbjct: 374 ETFDVELTKNVQGLGITI----AGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQII 429
Query: 159 AINDHSIVGCRHYEVAKMLRELPKSQPFTL 188
A++ ++ G + + ++LR ++ TL
Sbjct: 430 AVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 459
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 115 VTKTEDALGLTIT-DNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEV 173
V+K + GL I+ + G+ FI+ + + + GD + +N +++G H +V
Sbjct: 556 VSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVNGITLLGENHQDV 615
Query: 174 AKMLRELP 181
+L+ELP
Sbjct: 616 VNILKELP 623
Score = 30.0 bits (66), Expect = 2.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 111 KEVEVTKTEDALGLTITDNGA-GYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCR 169
+ +E+ K + LG+ I++ IK + E + + VGD I A++D +VG
Sbjct: 1482 QHLELPKDQGGLGIAISEEDTLSGVIIKSLTEHGVAATDGRLKVGDQILAVDDEIVVG-- 1539
Query: 170 HYEVAKMLRELPKSQPFTLRL 190
Y + K + L K+ T++L
Sbjct: 1540 -YPIEKFI-SLLKTAKMTVKL 1558
Score = 30.0 bits (66), Expect = 2.8
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 113 VEVTKTEDALGLTI---TDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCR 169
+E++K LGL+I +D G I + E + + GD I +N +
Sbjct: 1630 IEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKAT 1689
Query: 170 HYEVAKMLRELPKSQPFTL 188
H E +LR+ P+ TL
Sbjct: 1690 HDEAINVLRQTPQRVRLTL 1708
>gi|66346708 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform b [Homo sapiens]
Length = 1256
Score = 37.7 bits (86), Expect = 0.013
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 22/149 (14%)
Query: 44 AHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIF 103
+H S TGK+ G + R +P ++ + + + D L + I
Sbjct: 594 SHSSKTGKVNGMKDARP----------SSPADVASNSSHGYPNDTVSLASSIATQPELIT 643
Query: 104 AHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDH 163
H + K G TI D+ G +R+K+ R + GD I +N
Sbjct: 644 VH---------IVKGPMGFGFTIADSPGGGG--QRVKQIVDSPRCRGLKEGDLIVEVNKK 692
Query: 164 SIVGCRHYEVAKMLRELPKSQPFTLRLVQ 192
++ H +V ML E PK TL LVQ
Sbjct: 693 NVQALTHNQVVDMLVECPKGSEVTL-LVQ 720
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 136 IKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLV 191
I RI EGS +R + VGD I A+N SI H ++ +++E TLR++
Sbjct: 1038 IGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKE--AGNTVTLRII 1091
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 37.7 bits (86), Expect = 0.013
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 22/149 (14%)
Query: 44 AHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIF 103
+H S TGK+ G + R +P ++ + + + D L + I
Sbjct: 594 SHSSKTGKVNGMKDARP----------SSPADVASNSSHGYPNDTVSLASSIATQPELIT 643
Query: 104 AHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDH 163
H + K G TI D+ G +R+K+ R + GD I +N
Sbjct: 644 VH---------IVKGPMGFGFTIADSPGGGG--QRVKQIVDSPRCRGLKEGDLIVEVNKK 692
Query: 164 SIVGCRHYEVAKMLRELPKSQPFTLRLVQ 192
++ H +V ML E PK TL LVQ
Sbjct: 693 NVQALTHNQVVDMLVECPKGSEVTL-LVQ 720
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 136 IKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLV 191
I RI EGS +R + VGD I A+N SI H ++ +++E TLR++
Sbjct: 1009 IGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKE--AGNTVTLRII 1062
>gi|74272282 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform a [Homo sapiens]
Length = 1287
Score = 37.7 bits (86), Expect = 0.013
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 22/149 (14%)
Query: 44 AHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIF 103
+H S TGK+ G + R +P ++ + + + D L + I
Sbjct: 594 SHSSKTGKVNGMKDARP----------SSPADVASNSSHGYPNDTVSLASSIATQPELIT 643
Query: 104 AHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDH 163
H + K G TI D+ G +R+K+ R + GD I +N
Sbjct: 644 VH---------IVKGPMGFGFTIADSPGGGG--QRVKQIVDSPRCRGLKEGDLIVEVNKK 692
Query: 164 SIVGCRHYEVAKMLRELPKSQPFTLRLVQ 192
++ H +V ML E PK TL LVQ
Sbjct: 693 NVQALTHNQVVDMLVECPKGSEVTL-LVQ 720
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 136 IKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLV 191
I RI EGS +R + VGD I A+N SI H ++ +++E TLR++
Sbjct: 1037 IGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKE--AGNTVTLRII 1090
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit
9A [Homo sapiens]
Length = 1098
Score = 37.7 bits (86), Expect = 0.013
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 113 VEVTKTEDALGLTITDNGAGY--------AFIKRIKEGSIINRIEAVCVGDSIEAINDHS 164
VE+ K ED LG++I G G F+K + EG R + V D I ++ S
Sbjct: 505 VELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGIS 564
Query: 165 IVGCRHYEVAKMLRELPKSQPFTLRLVQP 193
+VG A +LR + F + +P
Sbjct: 565 LVGVTQNFAATVLRNTKGNVRFVIGREKP 593
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 37.0 bits (84), Expect = 0.023
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 107 RGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIV 166
+ E + + K G TI D+ G +R+K+ I +C GD I IN ++
Sbjct: 600 QAELMTLTIVKGAQGFGFTIADSPTG----QRVKQILDIQGCPGLCEGDLIVEINQQNVQ 655
Query: 167 GCRHYEVAKMLRELP 181
H EV +L++ P
Sbjct: 656 NLSHTEVVDILKDCP 670
Score = 35.8 bits (81), Expect = 0.050
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 136 IKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLV 191
I RI +GS +R + VGD I A+N SI+ H ++ K++++ S TLR++
Sbjct: 954 IGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLS--VTLRII 1007
>gi|223890252 glutamate receptor interacting protein 1 [Homo
sapiens]
Length = 1076
Score = 36.2 bits (82), Expect = 0.038
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 113 VEVTKTEDA-LGLTITD--NGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCR 169
VE+ K E LGLT++ + G + +++G I R + + VGD I+A+N ++ R
Sbjct: 54 VELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFR 113
Query: 170 HYEVAKMLREL 180
H E+ +L+ +
Sbjct: 114 HDEIISLLKNV 124
Score = 31.2 bits (69), Expect = 1.2
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 113 VEVTKTEDA-LGLTITDN---GAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGC 168
VEV KT A LG+ +T + I +IK SI +R A+ VGD I +I+ S+ C
Sbjct: 253 VEVAKTPGASLGVALTTSMCCNKQVIVIDKIKSASIADRCGALHVGDHILSIDGTSMEYC 312
Query: 169 RHYEVAKML 177
E + L
Sbjct: 313 TLAEATQFL 321
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 113 VEVTKTEDALGLTI--TDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVG 167
VE+ + LG+TI T+ I + +G + R A+ +GD I AIN S+ G
Sbjct: 622 VELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKG 678
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 4 AAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFRTQLA--HGSPTGKIEGFTNVREL 61
AA REA TP PPPA S P A P L+ + LA G P G +
Sbjct: 45 AARREAASPGTPGPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSS 104
Query: 62 YAKIAEAFGIAPTEILFCTLNSHK 85
A + + G AP SH+
Sbjct: 105 SAASSPSSGRAPGAAPSAAAKSHR 128
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 107 RGETKEVEVTKTEDALGLTITDNGAGY--------AFIKRIKEGSIINRIEAVCVGDSIE 158
R E VE+ K + LG++I GAG F+K + EG +R + V D +
Sbjct: 491 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLV 550
Query: 159 AINDHSIVGCRHYEVAKMLR 178
++ S+VG A +LR
Sbjct: 551 EVDGTSLVGVTQSFAASVLR 570
>gi|122937249 glutamate receptor interacting protein 2 [Homo
sapiens]
Length = 1141
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 113 VEVTKTE-DALGLTITDNGA---GYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGC 168
VE+ KT ALG+++T I RIK S+++R A+ GD I +I+ S+ C
Sbjct: 346 VEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHC 405
Query: 169 RHYEVAKMLREL 180
E K+L +
Sbjct: 406 SLLEATKLLASI 417
Score = 33.1 bits (74), Expect = 0.33
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 107 RGETKEVEVTKTEDALGLTITD--NGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHS 164
RG T + K LGLTI+ + G + ++ G + R + + +GD I ++N
Sbjct: 141 RGITVVELIKKEGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSVNGIH 200
Query: 165 IVGCRHYEVAKMLREL 180
+ RH E+ +L+ +
Sbjct: 201 LTRLRHDEIITLLKNV 216
>gi|169168434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 1 MEGAAAREA---RGTETPRASAPPPAPSEPPAAPRARPRLVFRT 41
MEGAA+ A R TP A PPAP+ P A P + RL +R+
Sbjct: 109 MEGAASLPADRERSPRTPGAGPWPPAPARPAAPPCSAVRLGYRS 152
>gi|113417342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 1 MEGAAAREA---RGTETPRASAPPPAPSEPPAAPRARPRLVFRT 41
MEGAA+ A R TP A PPAP+ P A P + RL +R+
Sbjct: 109 MEGAASLPADRERSPRTPGAGPWPPAPARPAAPPCSAVRLGYRS 152
>gi|113416881 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 1 MEGAAAREA---RGTETPRASAPPPAPSEPPAAPRARPRLVFRT 41
MEGAA+ A R TP A PPAP+ P A P + RL +R+
Sbjct: 109 MEGAASLPADRERSPRTPGAGPWPPAPARPAAPPCSAVRLGYRS 152
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 109 ETKEVEVTKT-EDALGLTITDN-----GAGYAFIKRIKEGSIINRIEAVCVGDSIEAIND 162
E + VE+ + DALG++I G FI I+ + R + + VGD I +IN
Sbjct: 1673 EPRTVEINRELSDALGISIAGGRGSPLGDIPVFIAMIQASGVAARTQKLKVGDRIVSING 1732
Query: 163 HSIVGCRHYEVAKMLR 178
+ G H +V +L+
Sbjct: 1733 QPLDGLSHADVVNLLK 1748
Score = 29.6 bits (65), Expect = 3.6
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 106 VRGETKEVEVTKTEDALGLTIT---DNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAIND 162
V G+ +E++K LGL+I D I + E R + GD I +N
Sbjct: 1431 VPGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNG 1490
Query: 163 HSIVGCRHYEVAKMLRELPK 182
+ H E LR+ P+
Sbjct: 1491 VDLRNSSHEEAITALRQTPQ 1510
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 108 GETKEVEV--TKTEDALGLTI---TDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAIND 162
GE + V + K + LG +I +++G G ++ ++ GS+ + E + VGD I +ND
Sbjct: 136 GEVRLVSLRRAKAHEGLGFSIRGGSEHGVGI-YVSLVEPGSLAEK-EGLRVGDQILRVND 193
Query: 163 HSIVGCRHYEVAKMLR 178
S+ H E K L+
Sbjct: 194 KSLARVTHAEAVKALK 209
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 34.3 bits (77), Expect = 0.15
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 104 AHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIE--------AVCVGD 155
A + E + + + LG++I G G K EG I+R+ V VGD
Sbjct: 720 ARIEEEELTLTILRQTGGLGISIA-GGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGD 778
Query: 156 SIEAINDHSIVGCRHYEVAKMLR---ELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVE 212
+ +N ++ G H+E + LR + + + R+V+P+ A + R P E
Sbjct: 779 KLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRE 838
Query: 213 AK 214
+
Sbjct: 839 RR 840
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 115 VTKTEDALGLTI------TDNGAGYA--FIKRIKEGSIINRIEAVCVGDSIEAINDHSIV 166
+ ++E LG +I T AG A F+ RI EG +R + VGD + +IN +
Sbjct: 865 LARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVT 924
Query: 167 GCRHYEVAKML 177
RH +L
Sbjct: 925 EARHDHAVSLL 935
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 34.3 bits (77), Expect = 0.15
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 104 AHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIE--------AVCVGD 155
A + E + + + LG++I G G K EG I+R+ V VGD
Sbjct: 720 ARIEEEELTLTILRQTGGLGISIA-GGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGD 778
Query: 156 SIEAINDHSIVGCRHYEVAKMLR---ELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVE 212
+ +N ++ G H+E + LR + + + R+V+P+ A + R P E
Sbjct: 779 KLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRE 838
Query: 213 AK 214
+
Sbjct: 839 RR 840
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 115 VTKTEDALGLTI------TDNGAGYA--FIKRIKEGSIINRIEAVCVGDSIEAINDHSIV 166
+ ++E LG +I T AG A F+ RI EG +R + VGD + +IN +
Sbjct: 865 LARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVT 924
Query: 167 GCRHYEVAKML 177
RH +L
Sbjct: 925 EARHDHAVSLL 935
>gi|74316006 CNKSR family member 3 [Homo sapiens]
Length = 555
Score = 34.3 bits (77), Expect = 0.15
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 10/139 (7%)
Query: 117 KTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKM 176
K + LG+ I G I E S +R + + GD + +N ++VG + + K
Sbjct: 218 KPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVKK 277
Query: 177 LRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRETLRLRSGGAATVEEAP 236
LRE P L+ +P +F+ P K + L S AT +
Sbjct: 278 LRENPTGVVLLLK-KRPTGSFNF---------TPAPLKNLRWKPPLVQTSPPPATTQSPE 327
Query: 237 SEFEEEASRKVDDLLESYM 255
S + ++ +L+ Y+
Sbjct: 328 STMDTSLKKEKSAILDLYI 346
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,824,378
Number of Sequences: 37866
Number of extensions: 539528
Number of successful extensions: 7753
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 7202
Number of HSP's gapped (non-prelim): 558
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.