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Search of human proteins with 188528652
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188528652 hypothetical protein LOC745 isoform 2 [Homo
sapiens]
(1151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens] 2367 0.0
gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens] 2253 0.0
gi|239750374 PREDICTED: chromosome 12 open reading frame 28 [Hom... 562 e-160
gi|169204180 PREDICTED: hypothetical protein LOC196446 [Homo sap... 562 e-160
gi|169204830 PREDICTED: hypothetical protein LOC196446 [Homo sap... 541 e-153
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 75 4e-13
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 66 2e-10
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 65 3e-10
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 65 5e-10
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 64 6e-10
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 64 6e-10
gi|146134388 YLP motif containing 1 [Homo sapiens] 64 1e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 62 3e-09
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 61 5e-09
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 61 5e-09
gi|160707881 formin 2 [Homo sapiens] 61 7e-09
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 61 7e-09
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 60 9e-09
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 60 9e-09
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 59 2e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 3e-08
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 59 3e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 59 3e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 59 3e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 59 3e-08
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 58 5e-08
gi|18959210 WIRE protein [Homo sapiens] 58 5e-08
gi|153792074 proline rich 12 [Homo sapiens] 58 6e-08
gi|55750053 atrophin-1 [Homo sapiens] 57 8e-08
gi|55750041 atrophin-1 [Homo sapiens] 57 8e-08
>gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens]
Length = 1151
Score = 2367 bits (6133), Expect = 0.0
Identities = 1151/1151 (100%), Positives = 1151/1151 (100%)
Query: 1 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS 60
MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS
Sbjct: 1 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS 60
Query: 61 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP 120
HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP
Sbjct: 61 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP 120
Query: 121 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP 180
PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP
Sbjct: 121 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP 180
Query: 181 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL 240
PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL
Sbjct: 181 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL 240
Query: 241 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ 300
LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ
Sbjct: 241 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ 300
Query: 301 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK 360
GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK
Sbjct: 301 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK 360
Query: 361 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP 420
WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP
Sbjct: 361 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP 420
Query: 421 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH 480
EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH
Sbjct: 421 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH 480
Query: 481 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD 540
FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
Sbjct: 481 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD 540
Query: 541 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT 600
SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT
Sbjct: 541 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT 600
Query: 601 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG 660
TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
Sbjct: 601 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG 660
Query: 661 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS 720
KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS
Sbjct: 661 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS 720
Query: 721 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV 780
SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV
Sbjct: 721 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV 780
Query: 781 VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR 840
VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR
Sbjct: 781 VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR 840
Query: 841 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL 900
QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL
Sbjct: 841 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL 900
Query: 901 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS 960
GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS
Sbjct: 901 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS 960
Query: 961 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ 1020
PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ
Sbjct: 961 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ 1020
Query: 1021 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK 1080
VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK
Sbjct: 1021 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK 1080
Query: 1081 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT 1140
EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT
Sbjct: 1081 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT 1140
Query: 1141 DYHFHFYRLCD 1151
DYHFHFYRLCD
Sbjct: 1141 DYHFHFYRLCD 1151
>gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens]
Length = 1111
Score = 2253 bits (5838), Expect = 0.0
Identities = 1104/1136 (97%), Positives = 1104/1136 (97%), Gaps = 31/1136 (2%)
Query: 16 GHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHL 75
GHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHL
Sbjct: 7 GHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHL 66
Query: 76 SPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTL 135
SPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTL
Sbjct: 67 SPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTL 126
Query: 136 PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPP 195
PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPP
Sbjct: 127 PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPP 186
Query: 196 PHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKK 255
PHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKK
Sbjct: 187 PHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKK 246
Query: 256 RKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIA 315
RKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIA
Sbjct: 247 RKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIA 306
Query: 316 RVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNKWATLYDANYKELPML 375
RVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNKWATLYDANYKELPML
Sbjct: 307 RVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNKWATLYDANYKELPML 366
Query: 376 TYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTPEGLKPLDCFYLKLHG 435
TYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTPEGLKPLDCFYLKLHG
Sbjct: 367 TYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTPEGLKPLDCFYLKLHG 426
Query: 436 VKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLHFSETTANNMRKKGKP 495
VKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLHFSETTANNMRKKGKP
Sbjct: 427 VKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLHFSETTANNMRKKGKP 486
Query: 496 NPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESDSDVLWQRAQVPDTVF 555
NPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESDSDVLWQRAQVPDTVF
Sbjct: 487 NPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESDSDVLWQRAQVPDTVF 546
Query: 556 HHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDTTEQLKRISRMRLVHY 615
HHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDTTEQLKRISRMRLVHY
Sbjct: 547 HHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDTTEQLKRISRMRLVHY 606
Query: 616 RYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANGKTIENFLVVNKERIF 675
RYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANGKTIENFLVVNKERIF
Sbjct: 607 RYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANGKTIENFLVVNKERIF 666
Query: 676 MENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSHAGSQFSRAG 735
MENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSHAGSQFSRAG
Sbjct: 667 MENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSHAGSQFSRAG 726
Query: 736 SVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSVVSMSTLYVLSLRTEE 795
SVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSVVSMSTLYVLSLRTEE
Sbjct: 727 SVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSVVSMSTLYVLSLRTEE 786
Query: 796 DLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLRQSPLTTGLPGIQPSL 855
DLVDTDG SSQSFGTTQLRQSPLTTGLPGIQPSL
Sbjct: 787 DLVDTDGR--------------------------SSQSFGTTQLRQSPLTTGLPGIQPSL 820
Query: 856 LLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPS 915
LLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPS
Sbjct: 821 LLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPS 880
Query: 916 PSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLASPAVPFPGGQGKAKNS 975
PSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLASPAVPFPGGQGKAKNS
Sbjct: 881 PSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLASPAVPFPGGQGKAKNS 940
Query: 976 PSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQVLENSMSITSQYCAP 1035
PSLGFHGRARRGALQSSVGPAEPTWAQGQS EPVPSLTSIQVLENSMSITSQYCAP
Sbjct: 941 PSLGFHGRARRGALQSSVGPAEPTWAQGQS-----EPVPSLTSIQVLENSMSITSQYCAP 995
Query: 1036 GDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHT 1095
GDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHT
Sbjct: 996 GDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHT 1055
Query: 1096 HQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPATDYHFHFYRLCD 1151
HQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPATDYHFHFYRLCD
Sbjct: 1056 HQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPATDYHFHFYRLCD 1111
>gi|239750374 PREDICTED: chromosome 12 open reading frame 28 [Homo
sapiens]
Length = 972
Score = 562 bits (1449), Expect = e-160
Identities = 371/861 (43%), Positives = 483/861 (56%), Gaps = 110/861 (12%)
Query: 1 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKE---DASDLCFPDISAPASSA 57
M+VV E EALQ+FFE NG LE +DTS+LEE++ + A PD P SA
Sbjct: 1 MDVVGENEALQQFFEAQGANGTLENPALDTSLLEEFLGNDFDLGALQRQLPD--TPPYSA 58
Query: 58 SYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGG 117
S S P + G+ P P+ GR P PF
Sbjct: 59 SDSCSPPQVKGACY------PTLRPTAGR-----------------------TPAPFLHP 89
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
T P + + DS G + N HL + H+G+ +
Sbjct: 90 TAAPAMPPMHPLQSTSGMGDSCQIHGG--FHSCHSNASHLATPLDQSVSSHLGIGC--SY 145
Query: 178 PPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQML 237
P P H PG PP D E + GL P H ++
Sbjct: 146 PQQPLCHSPGASLPPTKKRKCTQALED---SGECRVWACHCRPNGLFP----HVRK--WC 196
Query: 238 HQLLQQH--GAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP 295
QLL + G+ L K R + P P H T +
Sbjct: 197 QQLLAMYLAGSNLMEKNEKMRSAAHLLP----------------------PAHDTSLVTL 234
Query: 296 P--WPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKW 353
P WP + S S + VQ P DS+ + D ++KW
Sbjct: 235 PYTWPTHQLHAASLTSRSRS-SEVQDP--------------DSEGQNRMPTDQCSPALKW 279
Query: 354 QPHQQNKWATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGE 413
QP W +L +++Y++LP + YRV DKGFNFS D+AFVCQKKNHFQ+T++I + G
Sbjct: 280 QPCHSVPWHSLLNSHYEKLPDVGYRVVTDKGFNFSPADEAFVCQKKNHFQITIHIQVWGS 339
Query: 414 PKYVKTPEGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTK 473
PK+V+T GLKP++ FYLK+ G K+EA NQ I IEQSQ+DRSK+ FNPV ++L +QVTK
Sbjct: 340 PKFVETEMGLKPIEMFYLKVFGTKVEATNQIIAIEQSQADRSKKIFNPVKIDLLADQVTK 399
Query: 474 VTVGRLHFSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASN 533
VT+GRLHFSETTANNMRKKGKPNPDQRYFMLVV L A Q+Q Y L+A ISERIIVRASN
Sbjct: 400 VTLGRLHFSETTANNMRKKGKPNPDQRYFMLVVGLYAANQDQFYLLSAHISERIIVRASN 459
Query: 534 PGQFESDSDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKE 593
PGQFE+DSD LWQR QVP+++ HGRVGINTD PDEALVV GN+KVMG++MHPSD RAK+
Sbjct: 460 PGQFENDSDALWQRGQVPESIVCHGRVGINTDAPDEALVVCGNMKVMGTIMHPSDSRAKQ 519
Query: 594 HVQEVDTTEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTG 653
++QEVDT EQLKRI++MR+V Y YKPEFA++ GI TA +TG+IAQEV+EILP AV++ G
Sbjct: 520 NIQEVDTNEQLKRIAQMRIVEYDYKPEFASAMGIN-TAHQTGMIAQEVQEILPRAVREVG 578
Query: 654 DMVFANGKTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLD 713
D+ NG+T+ENFL+V+K++IFMENVGAVK+LCKLT+NLE RI+ELE W+ KLA+L+RL
Sbjct: 579 DVTCGNGETLENFLMVDKDQIFMENVGAVKQLCKLTNNLEERIEELEIWNRKLARLKRLS 638
Query: 714 SLKSTGSSGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVV---PDQACISQRFLQGTII 770
S KS+ S + S+ SRA S +R V K++ V QAC + F Q +I
Sbjct: 639 SWKSSASEAS---TISKSSRAVSASSPRR--AVHKKNNKVYFSGKRQACPNWVF-QTLVI 692
Query: 771 ALVVVMAFSVVSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWS 830
L+ VMAF +++ LY+LSL+ ++ V +++S Q P AL P +
Sbjct: 693 TLIAVMAFCALTIVALYILSLKDQDRRVPNLPPSNITSS--------QEP----ALLPTA 740
Query: 831 SQSFGTTQLRQSPLTTGLPGI 851
S S T L +P + +P I
Sbjct: 741 SSSAPNTSLVTTPASLQVPEI 761
Score = 89.0 bits (219), Expect = 2e-17
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 1000 WAQGQSASLLAEPVPS------------LTSIQVLENSMSITSQYCAPGDACRPGNFTYH 1047
W++ +S S+LA S ++SIQ++E I QYC C GN+ Y+
Sbjct: 802 WSEDKSKSVLARNALSGPDWESDWIDTTISSIQIMEIQQIIDHQYCIQSLQCGSGNYNYN 861
Query: 1048 IPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHTHQD-----TQGT 1102
IPV+ TP ++ +L++N++ P+ V C + L +H++ TQG
Sbjct: 862 IPVNKHTPTNVKFSLEINTTEPLIVFQCKFTLGNICFHSKRGTKGLESHREISQEMTQGY 921
Query: 1103 SHRWPITILSFREFTYHFRVALLGQANCSSEALAQPA--TDYHFHFYRLC 1150
H W + + F + +HFRVA A+CS++ TDY F+FYR C
Sbjct: 922 QHIWSLPVAPFSDSMFHFRVAAPDLADCSTDPYFAGIFFTDYFFYFYRRC 971
>gi|169204180 PREDICTED: hypothetical protein LOC196446 [Homo
sapiens]
Length = 972
Score = 562 bits (1449), Expect = e-160
Identities = 371/861 (43%), Positives = 483/861 (56%), Gaps = 110/861 (12%)
Query: 1 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKE---DASDLCFPDISAPASSA 57
M+VV E EALQ+FFE NG LE +DTS+LEE++ + A PD P SA
Sbjct: 1 MDVVGENEALQQFFEAQGANGTLENPALDTSLLEEFLGNDFDLGALQRQLPD--TPPYSA 58
Query: 58 SYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGG 117
S S P + G+ P P+ GR P PF
Sbjct: 59 SDSCSPPQVKGACY------PTLRPTAGR-----------------------TPAPFLHP 89
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
T P + + DS G + N HL + H+G+ +
Sbjct: 90 TAAPAMPPMHPLQSTSGMGDSCQIHGG--FHSCHSNASHLATPLDQSVSSHLGIGC--SY 145
Query: 178 PPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQML 237
P P H PG PP D E + GL P H ++
Sbjct: 146 PQQPLCHSPGASLPPTKKRKCTQALED---SGECRVWACHCRPNGLFP----HVRK--WC 196
Query: 238 HQLLQQH--GAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP 295
QLL + G+ L K R + P P H T +
Sbjct: 197 QQLLAMYLAGSNLMEKNEKMRSATHLLP----------------------PAHDTSLVTL 234
Query: 296 P--WPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKW 353
P WP + S S + VQ P DS+ + D ++KW
Sbjct: 235 PYTWPTHQLHAASLTSRSRS-SEVQDP--------------DSEGQNRMPTDQCSPALKW 279
Query: 354 QPHQQNKWATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGE 413
QP W +L +++Y++LP + YRV DKGFNFS D+AFVCQKKNHFQ+T++I + G
Sbjct: 280 QPCHSVPWHSLLNSHYEKLPDVGYRVVTDKGFNFSPADEAFVCQKKNHFQITIHIQVWGS 339
Query: 414 PKYVKTPEGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTK 473
PK+V+T GLKP++ FYLK+ G K+EA NQ I IEQSQ+DRSK+ FNPV ++L +QVTK
Sbjct: 340 PKFVETEMGLKPIEMFYLKVFGTKVEATNQIIAIEQSQADRSKKIFNPVKIDLLADQVTK 399
Query: 474 VTVGRLHFSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASN 533
VT+GRLHFSETTANNMRKKGKPNPDQRYFMLVV L A Q+Q Y L+A ISERIIVRASN
Sbjct: 400 VTLGRLHFSETTANNMRKKGKPNPDQRYFMLVVGLYAANQDQFYLLSAHISERIIVRASN 459
Query: 534 PGQFESDSDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKE 593
PGQFE+DSD LWQR QVP+++ HGRVGINTD PDEALVV GN+KVMG++MHPSD RAK+
Sbjct: 460 PGQFENDSDALWQRGQVPESIVCHGRVGINTDAPDEALVVCGNMKVMGTIMHPSDSRAKQ 519
Query: 594 HVQEVDTTEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTG 653
++QEVDT EQLKRI++MR+V Y YKPEFA++ GI TA +TG+IAQEV+EILP AV++ G
Sbjct: 520 NIQEVDTNEQLKRIAQMRIVEYDYKPEFASAMGIN-TAHQTGMIAQEVQEILPRAVREVG 578
Query: 654 DMVFANGKTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLD 713
D+ NG+T+ENFL+V+K++IFMENVGAVK+LCKLT+NLE RI+ELE W+ KLA+L+RL
Sbjct: 579 DVTCGNGETLENFLMVDKDQIFMENVGAVKQLCKLTNNLEERIEELEIWNRKLARLKRLS 638
Query: 714 SLKSTGSSGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVV---PDQACISQRFLQGTII 770
S KS+ S + S+ SRA S +R V K++ V QAC + F Q +I
Sbjct: 639 SWKSSASEAS---TISKSSRAVSASSPRR--AVHKKNNKVYFSGKRQACPNWVF-QTLVI 692
Query: 771 ALVVVMAFSVVSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWS 830
L+ VMAF +++ LY+LSL+ ++ V +++S Q P AL P +
Sbjct: 693 TLIAVMAFCALTIVALYILSLKDQDRRVPNLPPSNITSS--------QEP----ALLPTA 740
Query: 831 SQSFGTTQLRQSPLTTGLPGI 851
S S T L +P + +P I
Sbjct: 741 SSSAPNTSLVTTPASLQVPEI 761
Score = 89.0 bits (219), Expect = 2e-17
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 1000 WAQGQSASLLAEPVPS------------LTSIQVLENSMSITSQYCAPGDACRPGNFTYH 1047
W++ +S S+LA S ++SIQ++E I QYC C GN+ Y+
Sbjct: 802 WSEDKSKSVLARNALSGPDWESDWIDTTISSIQIMEIQQIIDHQYCIQSLQCGSGNYNYN 861
Query: 1048 IPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHTHQD-----TQGT 1102
IPV+ TP ++ +L++N++ P+ V C + L +H++ TQG
Sbjct: 862 IPVNKHTPTNVKFSLEINTTEPLIVFQCKFTLGNICFHSKRGTKGLESHREISQEMTQGY 921
Query: 1103 SHRWPITILSFREFTYHFRVALLGQANCSSEALAQPA--TDYHFHFYRLC 1150
H W + + F + +HFRVA A+CS++ TDY F+FYR C
Sbjct: 922 QHIWSLPVAPFSDSMFHFRVAAPDLADCSTDPYFAGIFFTDYFFYFYRRC 971
>gi|169204830 PREDICTED: hypothetical protein LOC196446 [Homo
sapiens]
Length = 910
Score = 541 bits (1394), Expect = e-153
Identities = 337/730 (46%), Positives = 439/730 (60%), Gaps = 93/730 (12%)
Query: 135 LPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPP 194
LPD+PP S S++ SP QV + C+ + P P H P P
Sbjct: 50 LPDTPPYSASDSCSPPQV-----------KGACYPTLRPTAGRTPAPFLH---PTAAPAM 95
Query: 195 PPHYPVLQRDLYMKAEPPIP---HYAAMGQGLVPTDLHHTQQSQM-------LHQLLQQH 244
PP +P LQ M I H + T L + S + L
Sbjct: 96 PPMHP-LQSTSGMGDSCQIHGGFHSCHSNASHLATPLDQSVSSHLGIGCSYPQQPLCHSP 154
Query: 245 GAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLS 304
GA LP P+KKRK +++ + + V A P + S Q P S
Sbjct: 155 GASLP--PTKKRKCTQALEDSGECR------------VWACHCRPMTSRSRSSEVQDPDS 200
Query: 305 PGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNKWATL 364
G +P Q P ++KWQP W +L
Sbjct: 201 EGQNRMPTD----QCSP----------------------------ALKWQPCHSVPWHSL 228
Query: 365 YDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTPEGLK 424
+++Y++LP + YRV DKGFNFS D+AFVCQKKNHFQ+T++I + G PK+V+T GLK
Sbjct: 229 LNSHYEKLPDVGYRVVTDKGFNFSPADEAFVCQKKNHFQITIHIQVWGSPKFVETEMGLK 288
Query: 425 PLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLHFSET 484
P++ FYLK+ G K+EA NQ I IEQSQ+DRSK+ FNPV ++L +QVTKVT+GRLHFSET
Sbjct: 289 PIEMFYLKVFGTKVEATNQIIAIEQSQADRSKKIFNPVKIDLLADQVTKVTLGRLHFSET 348
Query: 485 TANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESDSDVL 544
TANNMRKKGKPNPDQRYFMLVV L A Q+Q Y L+A ISERIIVRASNPGQFE+DSD L
Sbjct: 349 TANNMRKKGKPNPDQRYFMLVVGLYAANQDQFYLLSAHISERIIVRASNPGQFENDSDAL 408
Query: 545 WQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDTTEQL 604
WQR QVP+++ HGRVGINTD PDEALVV GN+KVMG++MHPSD RAK+++QEVDT EQL
Sbjct: 409 WQRGQVPESIVCHGRVGINTDAPDEALVVCGNMKVMGTIMHPSDSRAKQNIQEVDTNEQL 468
Query: 605 KRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANGKTIE 664
KRI++MR+V Y YKPEFA++ GI TA +TG+IAQEV+EILP AV++ GD+ NG+T+E
Sbjct: 469 KRIAQMRIVEYDYKPEFASAMGIN-TAHQTGMIAQEVQEILPRAVREVGDVTCGNGETLE 527
Query: 665 NFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAF 724
NFL+V+K++IFMENVGAVK+LCKLT+NLE RI+ELE W+ KLA+L+RL S KS+ S +
Sbjct: 528 NFLMVDKDQIFMENVGAVKQLCKLTNNLEERIEELEIWNRKLARLKRLSSWKSSASEAS- 586
Query: 725 SHAGSQFSRAGSVPHKKRPPKVASKSSSVV---PDQACISQRFLQGTIIALVVVMAFSVV 781
S+ SRA S +R V K++ V QAC + F Q +I L+ VMAF +
Sbjct: 587 --TISKSSRAVSASSPRR--AVHKKNNKVYFSGKRQACPNWVF-QTLVITLIAVMAFCAL 641
Query: 782 SMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLRQ 841
++ LY+LSL+ ++ V +++S Q P AL P +S S T L
Sbjct: 642 TIVALYILSLKDQDRRVPNLPPSNITSS--------QEP----ALLPTASSSAPNTSLVT 689
Query: 842 SPLTTGLPGI 851
+P + +P I
Sbjct: 690 TPASLQVPEI 699
Score = 89.0 bits (219), Expect = 2e-17
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 1000 WAQGQSASLLAEPVPS------------LTSIQVLENSMSITSQYCAPGDACRPGNFTYH 1047
W++ +S S+LA S ++SIQ++E I QYC C GN+ Y+
Sbjct: 740 WSEDKSKSVLARNALSGPDWESDWIDTTISSIQIMEIQQIIDHQYCIQSLQCGSGNYNYN 799
Query: 1048 IPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHTHQD-----TQGT 1102
IPV+ TP ++ +L++N++ P+ V C + L +H++ TQG
Sbjct: 800 IPVNKHTPTNVKFSLEINTTEPLIVFQCKFTLGNICFHSKRGTKGLESHREISQEMTQGY 859
Query: 1103 SHRWPITILSFREFTYHFRVALLGQANCSSEALAQPA--TDYHFHFYRLC 1150
H W + + F + +HFRVA A+CS++ TDY F+FYR C
Sbjct: 860 QHIWSLPVAPFSDSMFHFRVAAPDLADCSTDPYFAGIFFTDYFFYFYRRC 909
Score = 55.1 bits (131), Expect = 4e-07
Identities = 58/198 (29%), Positives = 76/198 (38%), Gaps = 44/198 (22%)
Query: 1 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKE---DASDLCFPDISAPASSA 57
M+VV E EALQ+FFE NG LE +DTS+LEE++ + A PD P SA
Sbjct: 1 MDVVGENEALQQFFEAQGANGTLENPALDTSLLEEFLGNDFDLGALQRQLPD--TPPYSA 58
Query: 58 SYSHGQPAMPGSSGVHHLSPPGGGPSPGRH---GPLPPPGYGTPLNCNNNNGMGAAPKPF 114
S S P + G+ G P+P H P PP + PL + +GMG
Sbjct: 59 SDSCSPPQVKGACYPTLRPTAGRTPAPFLHPTAAPAMPPMH--PL--QSTSGMG------ 108
Query: 115 PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSR 174
DS G + N HL + H+G+
Sbjct: 109 ----------------------DSCQIHG--GFHSCHSNASHLATPLDQSVSSHLGI--G 142
Query: 175 LEHPPPPPAHLPGPPPPP 192
+P P H PG PP
Sbjct: 143 CSYPQQPLCHSPGASLPP 160
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 75.1 bits (183), Expect = 4e-13
Identities = 87/359 (24%), Positives = 117/359 (32%), Gaps = 80/359 (22%)
Query: 50 ISAPASSASYSHG------QPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNN 103
+S+PA S + G P+ P G+ L PP P P P +PL +
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 104 NNGMGAAPKPFPGGTGPPIKAE--------------PKAPYAPGTL------PDSPPDSG 143
+G A P P P P+ A P +P AP +L P +PP
Sbjct: 309 PSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 368
Query: 144 SEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPP---------------------- 181
+ + + P L+TI P + H L+ PP P
Sbjct: 369 PPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS 428
Query: 182 ---------PAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQ 232
A L P P PP P LQ L + A PP+ ++ + P T
Sbjct: 429 FLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPL--QTSLSPAVSPLSSPLTI 486
Query: 233 QSQMLHQLLQQHGAELP----------THPSKKRKHSESPPSTLNAQMLNGM-------- 274
L H + P T S ++PP++L L +
Sbjct: 487 HPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPL 546
Query: 275 -IKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGL 332
P T L P AP P P PL+ P P SIA PP PP SP L
Sbjct: 547 QTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA--TPPPQAPPALASPPL 603
Score = 60.1 bits (144), Expect = 1e-08
Identities = 74/292 (25%), Positives = 98/292 (33%), Gaps = 26/292 (8%)
Query: 42 ASDLCFPDISAPASSASYSHGQPA----MPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGT 97
+S L + A +S AS+S P MP L+PP PP T
Sbjct: 481 SSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSL--------QTPPASLTT 532
Query: 98 PLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHL 157
P N AP P + P + P P P P S P+ P
Sbjct: 533 P---PLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPET---PSS 586
Query: 158 LRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYA 217
+ T P+ + P P PP + L PPP PP P LQ A PP+ A
Sbjct: 587 IATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLA 646
Query: 218 AMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQ 277
H Q+ A S S +PPS + ++
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 706
Query: 278 EPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
P + P+ P+ P P PP PL+ P +P S PP PP +PS
Sbjct: 707 PPSPPASPPMSPSATPPPQAPP--PLAAPPLQVPPS------PPASPPMSPS 750
Score = 55.8 bits (133), Expect = 2e-07
Identities = 84/332 (25%), Positives = 110/332 (33%), Gaps = 65/332 (19%)
Query: 45 LCFPDISAPASSAS------YSHGQPAMPGSSGVHHLSPP-GGGPSPGRHGPLPPPGYGT 97
L P + AP S + + P P + VH L P PSP P PP +
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA--S 682
Query: 98 PLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSE---AYSPQQVN- 153
P + AP P PP++ P P +P P + P + A P QV
Sbjct: 683 PPVSPSATPPSQAP---PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Query: 154 EPHLLRTITPETLCHVGVPSRL-----EHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMK 208
P ++P VP L + PP PPA LP P PPP P L
Sbjct: 740 SPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL------- 792
Query: 209 AEPP---IPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPST 265
A PP +P A G P A LP P +PP
Sbjct: 793 ATPPLQALPSPPASFPGQAPF----------------SPSASLPMSP------LATPPPQ 830
Query: 266 LNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPP 325
+ +++ P + L R P P P P L L++A P
Sbjct: 831 APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---RLTLALA---------P 878
Query: 326 GAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQ 357
G P P S +LSG L + S P +
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 910
Score = 40.4 bits (93), Expect = 0.010
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 805 AVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLRQSPLTTGLPGIQPSLLLVTTSLTS 864
A++T L AL P PP P+S + L SPL T P P L +
Sbjct: 791 ALATPPLQAL--PSPPASFPGQAPFSPSA----SLPMSPLATPPPQAPPVLAAPLLQVPP 844
Query: 865 SAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGP 923
S P S TL P P P T+ +GP L + PG PS SPS+ SGP
Sbjct: 845 SPPASP--TLQAPRRPPTP-----GPDTS-VSGPRLTLALAPGPPPPPSRSPSSTLSGP 895
Score = 36.2 bits (82), Expect = 0.18
Identities = 76/310 (24%), Positives = 99/310 (31%), Gaps = 57/310 (18%)
Query: 51 SAPASSASYSHGQPAM-PGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGA 109
+ P SA S PA P +SG +PP SPG P+ PG +
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPG---PVSSPGRAS-----------G 122
Query: 110 APKPFP-GGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCH 168
+P P G G I AE A G ++P S A + + + P TP
Sbjct: 123 TTRPGPLGQKGLRISAEETV--ARGKATEAPKRSALSAGARRDTSGP------TP----- 169
Query: 169 VGVPS----RLEHPPPPPAHLPGPPP-----PPPPPPHYPVLQRDLYMKAEPP--IPHYA 217
G PS R LP P P PP P V + EP
Sbjct: 170 -GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 228
Query: 218 AMGQGLVPTDLHHTQQSQMLHQLLQQHGAEL------PTHPSKKR-------KHSESPPS 264
+ G GL S + G P HPS+ + + + P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 265 TLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP 324
+A G + P T P P PP P +P P +LP S P P
Sbjct: 289 RKDAAPALGPLSSSP-LATPSPSGTKARPVPP--PDNAATPLPATLPPSPPLATPLPLAP 345
Query: 325 PGAPSPGLLQ 334
P +P LQ
Sbjct: 346 PSPSAPPSLQ 355
Score = 32.3 bits (72), Expect = 2.7
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 29/129 (22%)
Query: 38 SKEDASDLCFPDISAPASSASYSHGQPAM--PGSSGVHHLSPPGGG------PSPGRHGP 89
S+ +S L PD++ +SSA+ + + G G SPP P+ GP
Sbjct: 885 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 944
Query: 90 LPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP----------PIKAEPKAPYAPGTLP--D 137
PP + G AP P+P TGP + A APG L
Sbjct: 945 APPLAF---------RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGP 995
Query: 138 SPPDSGSEA 146
SP SG +A
Sbjct: 996 SPGTSGGKA 1004
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 65.9 bits (159), Expect = 2e-10
Identities = 85/322 (26%), Positives = 108/322 (33%), Gaps = 60/322 (18%)
Query: 33 LEEYISKEDASDLCFPDIS-APASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLP 91
L E +S+E++ L + AP + G P+ PG PP GG P GP P
Sbjct: 19 LNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKP---QGPPPQGGNQP--QGPPP 73
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQ 151
PPG P G P +P+ P PG P PP G ++ SP+
Sbjct: 74 PPGK-------------------PQGPPPQGGNKPQGPPPPGK-PQGPPPQGDKSRSPRS 113
Query: 152 VNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEP 211
P + + PPP + P PPPPP P P Q + P
Sbjct: 114 P-------------------PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 154
Query: 212 PIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQ----QHGAELPTHPSKKRKHSESPPSTLN 267
P QG P + ++ S+ Q Q G + P K PP N
Sbjct: 155 P----PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 210
Query: 268 AQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPG---PGSLPLSIARVQTPPWH- 323
+ G A SPP PQGP G P P + Q PP
Sbjct: 211 KPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 270
Query: 324 ---PPGAPSPGLLQDSDSLSGS 342
P G P PG Q GS
Sbjct: 271 GNKPQGPPPPGKPQGPPPQGGS 292
Score = 65.9 bits (159), Expect = 2e-10
Identities = 79/289 (27%), Positives = 98/289 (33%), Gaps = 53/289 (18%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPG--YGTPLNCNNNNGMGAA 110
P + G P PG PP GG P GP PPPG G P +N + +
Sbjct: 122 PPQGGNQPQGPPPPPGKP---QGPPPQGGNKP--QGP-PPPGKPQGPPPQGDNKSRSSRS 175
Query: 111 PKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPE----TL 166
P P G P +P+ P P P PP G PQ P + P+ +
Sbjct: 176 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN--KPQGPPPPGKPQGPPPQGDNKSQ 233
Query: 167 CHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPT 226
P + + PPP + P PPPPP P P Q + PP QG P
Sbjct: 234 SARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQGPPP- 288
Query: 227 DLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALP 286
Q G++ + S K PP G Q P P
Sbjct: 289 ----------------QGGSKSRSSRSPPGKPQGPPPQ-------GGNQPQGPPPPPGKP 325
Query: 287 LHP-------TRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAP 328
P + P PP PQGP P GS S ++PP P G P
Sbjct: 326 QGPPPQGGNKPQGPPPPGKPQGP-PPQGGSKSRS---ARSPPGKPQGPP 370
Score = 45.1 bits (105), Expect = 4e-04
Identities = 46/163 (28%), Positives = 55/163 (33%), Gaps = 44/163 (26%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPG--YGTPLNCNNNNGMGAA 110
P + G P PG PP GG P GP PPPG G P + + +
Sbjct: 246 PPQGGNQPQGPPPPPGKP---QGPPPQGGNKP--QGP-PPPGKPQGPPPQGGSKSRSSRS 299
Query: 111 PKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVG 170
P P G P +P+ P P P PP PQ N+P
Sbjct: 300 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPP--------PQGGNKPQ-----------GPP 340
Query: 171 VPSRLEHPPP-----------PPAHLPGPP------PPPPPPP 196
P + + PPP PP GPP P PPPP
Sbjct: 341 PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPP 383
Score = 43.1 bits (100), Expect = 0.002
Identities = 44/155 (28%), Positives = 52/155 (33%), Gaps = 15/155 (9%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGM 107
P P +P P G PP GG S R PP P N
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGG-SKSRSSRSPPGKPQGPPPQGGNQPQ 316
Query: 108 GAAPKPF-PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYS----PQQVNEPHLLRTIT 162
G P P P G P +P+ P PG PP GS++ S P + P
Sbjct: 317 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN 376
Query: 163 PETLCHVGVP----SRLEHPPPPPAHLPGPPPPPP 193
P+ G P + P PPA P PP PP
Sbjct: 377 PQ-----GPPPPAGGNPQQPQAPPAGQPQGPPRPP 406
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 65.5 bits (158), Expect = 3e-10
Identities = 75/304 (24%), Positives = 102/304 (33%), Gaps = 60/304 (19%)
Query: 33 LEEYISKEDASDLCFPDISAPA-SSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLP 91
L E +S+E++ L + P+ + G P PG P G P G + P
Sbjct: 19 LNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGK--------PQGPPPQGGNKPQG 70
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGT-GPPIKA--EPKAPYAPGTLPDSPP-DSGSEAY 147
PP G P +P+ PG GPP + +P+ P P P PP G+
Sbjct: 71 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQ 130
Query: 148 SPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYM 207
P +P ++ P + + PPP + P PPPPP P P Q
Sbjct: 131 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 208 KAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLN 267
+ PP QG P K + S+SPP
Sbjct: 191 QGPPP----PGKPQG--------------------------PPPQGDKSRSSQSPPGKPQ 220
Query: 268 AQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGA 327
G + P P PP PQGP P G+ P + PP P G
Sbjct: 221 GPPPQGGNQ------------PQGPPPPPGKPQGP-PPQGGNKP----QGPPPPGKPQGP 263
Query: 328 PSPG 331
P+ G
Sbjct: 264 PAQG 267
Score = 40.0 bits (92), Expect = 0.013
Identities = 49/169 (28%), Positives = 58/169 (34%), Gaps = 37/169 (21%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGG------PSPGR-HGPLP----------PPG- 94
P + G P PG PP GG P PG+ GP P PPG
Sbjct: 162 PPQGGNQPQGPPPPPGKP---QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGK 218
Query: 95 -YGTPLNCNNNNGMGAAPKPF-PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYS---- 148
G P N G P P P G P +P+ P PG P GS++ S
Sbjct: 219 PQGPPPQ-GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP 277
Query: 149 PQQVNEPHLLRTITPETLCHVGVP----SRLEHPPPPPAHLPGPPPPPP 193
P + P P+ G P + P PPA P PP PP
Sbjct: 278 PGKPQGPPQQEGNNPQ-----GPPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Score = 38.9 bits (89), Expect = 0.028
Identities = 40/124 (32%), Positives = 44/124 (35%), Gaps = 29/124 (23%)
Query: 77 PPGGGPSPGRHGPLPPPG--YGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYA--P 132
PP GG P GP PPPG G P N G P P GPP + K+ A P
Sbjct: 223 PPQGGNQP--QGPPPPPGKPQGPPPQ-GGNKPQGPPPPGKP--QGPPAQGGSKSQSARSP 277
Query: 133 GTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPP 192
P PP E +PQ P + P PPA G P P
Sbjct: 278 PGKPQGPPQQ--EGNNPQGPPPP---------------AGGNPQQPQAPPA---GQPQGP 317
Query: 193 PPPP 196
P PP
Sbjct: 318 PRPP 321
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 64.7 bits (156), Expect = 5e-10
Identities = 75/273 (27%), Positives = 96/273 (35%), Gaps = 59/273 (21%)
Query: 58 SYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGG 117
S+ H P++ G G H + GP P P PPP M P P PG
Sbjct: 396 SFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP-------------MNQGPHP-PGH 441
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
GPP P Y L +P SG V H + + P P +
Sbjct: 442 HGPP----PMDQY----LGSTPVGSG--------VYRLHQGKGMMPPP------PMGMMP 479
Query: 178 PPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQML 237
PPPPP G PPPPP P P Q+ PP P + +P + T +
Sbjct: 480 PPPPPPS--GQPPPPPSGP-LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTT--- 533
Query: 238 HQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHP-TRAPSPP 296
+P ++ + SP + Q G T +PL P + P PP
Sbjct: 534 ---TSAGTGSIPPWQQQQAAAAASPGA-----------PQMQGNPTMVPLPPGVQPPLPP 579
Query: 297 WPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
P P P PGS + A PP PP PS
Sbjct: 580 GAPPPPPPPPPGSAGMMYAPPPPPP--PPMDPS 610
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 64.3 bits (155), Expect = 6e-10
Identities = 75/285 (26%), Positives = 98/285 (34%), Gaps = 53/285 (18%)
Query: 38 SKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGT 97
SK D+ P P S+ ++ G P +PG GP GP PPP G
Sbjct: 178 SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPG------------GPRQPSPGPTPPPFPG- 224
Query: 98 PLNCNNNNGMGAAP-KPFPGGTGPPIKAEPKAPYAPGTL-----PDSPPDSGSEAY---- 147
N +G + P + P P P P P PP G+
Sbjct: 225 ----NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280
Query: 148 ----SPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPP------PPPH 197
P Q N+P + T P S PPPPP PGPPP PP P
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSA-------SSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 198 YPVLQRDLYMKAE-PPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKR 256
P QR+L + + PP+P G P +++ + LP P R
Sbjct: 334 LP--QRNLSLSSSTPPLPSPGRSG----PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 257 KHSESP--PSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPP 299
S S P+T +G+ G LP A +PP PP
Sbjct: 388 NGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 52.4 bits (124), Expect = 2e-06
Identities = 80/333 (24%), Positives = 106/333 (31%), Gaps = 83/333 (24%)
Query: 37 ISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYG 96
+ K +D P + P + + G G G GGG G G PPG G
Sbjct: 46 LKKTVTNDRSAPILDKPKGAGAGGGGG----GFGGGGGFGGGGGGGGGGSFGGGGPPGLG 101
Query: 97 -----------TPLNCNNNNGMGAAPKPFPGGTGPPIKAEP-KAPYAPGTLPDSPPDSGS 144
+ N +N++G G+ P P G G A+P P PG P P G
Sbjct: 102 GLFQAGMPKLRSTANRDNDSG-GSRPPLLPPG-GRSTSAKPFSPPSGPGRFP--VPSPGH 157
Query: 145 EAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYP-VLQR 203
+ P+ P R PPP P P PPP P P +Q
Sbjct: 158 RSGPPE---------------------PQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQS 196
Query: 204 DLYMKAEPPIP------------------HYAAMGQGLVPTDLHHTQQSQMLHQLLQQHG 245
+ + PP+P A+G G + +QS + +
Sbjct: 197 SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSI-------RQSPLSSSSPFSNR 249
Query: 246 AELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSP 305
LP PS+ PP P +H R PP PPQ P
Sbjct: 250 PPLPPTPSRALDDKPPPPP--------------PPVGNRPSIH--REAVPPPPPQNNKPP 293
Query: 306 GPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDS 338
P + S + PP PP P P L S S
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Score = 52.0 bits (123), Expect = 3e-06
Identities = 45/141 (31%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYG---TPLNCNNNNGMGAA--PKPFPGGT 118
P+ P S PP PS PLPP G TP N + ++ P P PG +
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 119 GPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTI--TPETLCHVGVPSRLE 176
GP P + P + D P SG P R + TP+ GV S
Sbjct: 355 GP--LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 177 HPPPP-PAHLPGPPPPPPPPP 196
P PP P P PPPPPP
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPP 433
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 64.3 bits (155), Expect = 6e-10
Identities = 75/285 (26%), Positives = 98/285 (34%), Gaps = 53/285 (18%)
Query: 38 SKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGT 97
SK D+ P P S+ ++ G P +PG GP GP PPP G
Sbjct: 178 SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPG------------GPRQPSPGPTPPPFPG- 224
Query: 98 PLNCNNNNGMGAAP-KPFPGGTGPPIKAEPKAPYAPGTL-----PDSPPDSGSEAY---- 147
N +G + P + P P P P P PP G+
Sbjct: 225 ----NRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE 280
Query: 148 ----SPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPP------PPPH 197
P Q N+P + T P S PPPPP PGPPP PP P
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSA-------SSQAPPPPPPPSRPGPPPLPPSSSGNDETPR 333
Query: 198 YPVLQRDLYMKAE-PPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKR 256
P QR+L + + PP+P G P +++ + LP P R
Sbjct: 334 LP--QRNLSLSSSTPPLPSPGRSG----PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSR 387
Query: 257 KHSESP--PSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPP 299
S S P+T +G+ G LP A +PP PP
Sbjct: 388 NGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 52.4 bits (124), Expect = 2e-06
Identities = 80/333 (24%), Positives = 106/333 (31%), Gaps = 83/333 (24%)
Query: 37 ISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYG 96
+ K +D P + P + + G G G GGG G G PPG G
Sbjct: 46 LKKTVTNDRSAPILDKPKGAGAGGGGG----GFGGGGGFGGGGGGGGGGSFGGGGPPGLG 101
Query: 97 -----------TPLNCNNNNGMGAAPKPFPGGTGPPIKAEP-KAPYAPGTLPDSPPDSGS 144
+ N +N++G G+ P P G G A+P P PG P P G
Sbjct: 102 GLFQAGMPKLRSTANRDNDSG-GSRPPLLPPG-GRSTSAKPFSPPSGPGRFP--VPSPGH 157
Query: 145 EAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYP-VLQR 203
+ P+ P R PPP P P PPP P P +Q
Sbjct: 158 RSGPPE---------------------PQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQS 196
Query: 204 DLYMKAEPPIP------------------HYAAMGQGLVPTDLHHTQQSQMLHQLLQQHG 245
+ + PP+P A+G G + +QS + +
Sbjct: 197 SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSI-------RQSPLSSSSPFSNR 249
Query: 246 AELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSP 305
LP PS+ PP P +H R PP PPQ P
Sbjct: 250 PPLPPTPSRALDDKPPPPP--------------PPVGNRPSIH--REAVPPPPPQNNKPP 293
Query: 306 GPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDS 338
P + S + PP PP P P L S S
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Score = 52.0 bits (123), Expect = 3e-06
Identities = 45/141 (31%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYG---TPLNCNNNNGMGAA--PKPFPGGT 118
P+ P S PP PS PLPP G TP N + ++ P P PG +
Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 119 GPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTI--TPETLCHVGVPSRLE 176
GP P + P + D P SG P R + TP+ GV S
Sbjct: 355 GP--LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 177 HPPPP-PAHLPGPPPPPPPPP 196
P PP P P PPPPPP
Sbjct: 413 GPRPPLPPDRPSAGAPPPPPP 433
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 63.5 bits (153), Expect = 1e-09
Identities = 74/269 (27%), Positives = 101/269 (37%), Gaps = 60/269 (22%)
Query: 108 GAAPKPFPGGTGPPIKAEPKAPYAPG----TLPDSPPDSGSEAYSPQQVNEPHLLRTITP 163
G++ P P PP A P+A PG T P +P SG ++ Q + + L+ +
Sbjct: 10 GSSHYPPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQ 69
Query: 164 ETLCHVGVPSRLEHPP-PPPAHLPG-------PPPPPPPPPHYPVLQRDLYMKAEPPIPH 215
+ + V P L PP PPP +PG PPPPP PPP P L
Sbjct: 70 KQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALS------------- 116
Query: 216 YAAMGQGLVPTDLHHTQQSQMLHQLL-QQHGAELPTHPSKKRKHSESPPSTLNAQMLNGM 274
+ +Q Q HQ+L Q P + ESPP + M
Sbjct: 117 --------------YQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYM---- 158
Query: 275 IKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQ 334
P + + +P P PP P S P P + Q+PP AP+P
Sbjct: 159 ----PPSQSYMP-----PPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPS-YS 208
Query: 335 DSDSLSGSYLD------PNYQSIKWQPHQ 357
S S S SYL P+ Q+ +P Q
Sbjct: 209 SSSSSSQSYLSHSQSYLPSSQASPSRPSQ 237
Score = 52.8 bits (125), Expect = 2e-06
Identities = 63/248 (25%), Positives = 87/248 (35%), Gaps = 51/248 (20%)
Query: 73 HHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAP 132
HHL PP PLPPP P GG G + P
Sbjct: 79 HHLPPP----------PLPPP-----------------PVMPGGGYGD---------WQP 102
Query: 133 GTLPDSPPDSGSEAYSPQQVNEPHLL--RTITPETLCHVGVPSRLEHPPPPPAHLPGP-- 188
P PP + +Y QQ + +L + P L + + S E PP PP P
Sbjct: 103 PPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQ 162
Query: 189 ---PPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQG-LVPTDLH----HTQQSQMLH-Q 239
PPP PPP +YP Y+ P P + Q L PT + + QS + H Q
Sbjct: 163 SYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQ 222
Query: 240 LLQQHGAELPTHPSKKRKHSE--SPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPW 297
P+ PS+ S+ +PP ++QEP A + + P
Sbjct: 223 SYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPE 282
Query: 298 PPQGPLSP 305
P ++P
Sbjct: 283 PDPSTMTP 290
Score = 45.1 bits (105), Expect = 4e-04
Identities = 57/227 (25%), Positives = 70/227 (30%), Gaps = 77/227 (33%)
Query: 111 PKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVG 170
P P P P + P P LP + P G P V P L ++ P G
Sbjct: 527 PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGM----PPPVMPPSLPTSVPPP-----G 577
Query: 171 VPSRLEHPPPPPAHLP------GPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLV 224
+P L PPP P GPPP PPP L A PP+
Sbjct: 578 MPPSLSSAGPPPVLPPPSLSSAGPPPVLPPP--------SLSSTAPPPV----------- 618
Query: 225 PTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTA 284
+P P S +PP + PG
Sbjct: 619 -----------------------MPLPPLS----SATPPPGI----------PPPGVPQG 641
Query: 285 LPLHPTRAPSPP----WPPQGPLSPGPGSLPLSIARVQTPP--WHPP 325
+P T AP PP Q P P P LP ++ PP +HPP
Sbjct: 642 IPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPP 688
Score = 40.0 bits (92), Expect = 0.013
Identities = 44/163 (26%), Positives = 55/163 (33%), Gaps = 34/163 (20%)
Query: 76 SPPGGGPSPGRHGPLPPPGY--GTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPG 133
S PG P PG + P PP G G+ + + + P T PP+ P P P
Sbjct: 1501 SRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPV-----TRPPVPIPPPPP--PP 1553
Query: 134 TLPDSPPDSGSEAYSPQQV--------------NEPHLLRTITPETLCHVGVPSRLEHPP 179
LP PP + + +Q +E L ET P P
Sbjct: 1554 PLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVL----P 1609
Query: 180 PPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQG 222
PPP H PPP P P P M PP+ G G
Sbjct: 1610 PPPVHSSIPPPGPVPMGMPP-------MSKPPPVQQTVDYGHG 1645
Score = 37.7 bits (86), Expect = 0.063
Identities = 56/219 (25%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 64 PAMPGSSGVHHLSPPGGGPS---PGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP 120
PA+P + + PPG P P +PPPG P + ++ P P GP
Sbjct: 549 PALPAT-----VPPPGMPPPVMPPSLPTSVPPPGM--PPSLSSAGPPPVLPPPSLSSAGP 601
Query: 121 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVP----SRLE 176
P P + + P P S A P + P + + I P+ L VP S+
Sbjct: 602 PPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQ-LTAAPVPPASSSQSS 660
Query: 177 HPP--PPPAHLPGPPP--PPPPPPHYPVLQR---DLYMKAEPPIPHYA------AMGQGL 223
P P PA LP P PP ++P LQ + ++ P+ A + QGL
Sbjct: 661 QVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGL 720
Query: 224 VPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESP 262
+ +Q + + + G LP P + + ESP
Sbjct: 721 GESSAAPSQPITAVKDMPVRSGGLLPDPP--RSSYLESP 757
Score = 37.7 bits (86), Expect = 0.063
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 181 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTD----LHHTQQSQM 236
PP +P PPPPPP PP PV++ P +A+ Q D L T Q
Sbjct: 1542 PPVPIPPPPPPPPLPPPPPVIK-----------PQTSAVEQERWDEDSFYGLWDTNDEQG 1590
Query: 237 LHQLLQQHGAELPTHP--SKKRKHSESPP 263
L+ + A +P+ P HS PP
Sbjct: 1591 LNSEFKSETAAIPSAPVLPPPPVHSSIPP 1619
Score = 36.6 bits (83), Expect = 0.14
Identities = 84/365 (23%), Positives = 117/365 (32%), Gaps = 96/365 (26%)
Query: 51 SAPASSASY-SHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGA 109
S+ +SS SY SH Q +P S S P G S + PPP + N
Sbjct: 209 SSSSSSQSYLSHSQSYLPSSQASP--SRPSQGHSKSQLLAPPPP------SAPPGNKTTV 260
Query: 110 APKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAY-----SPQQVNEPHL------- 157
+P G + +A P +P + Y S QQ + HL
Sbjct: 261 QQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGP 320
Query: 158 -LRTITPETLCH-VGVPSRL--------EHPPPPPAHLPGPPPPPPPPPH---------- 197
+ TPE + V VP+ E PP PP + PPP PP P
Sbjct: 321 VVAKDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARL 380
Query: 198 ----------------------------YPVLQRDL--YMKAEPPIPHYAAMGQGLVPTD 227
+ LQ+ L Y + P PH M V
Sbjct: 381 KQLQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQPPPHIQTMS---VDMQ 437
Query: 228 LHHTQQSQMLHQLLQQH--------GAELPTHPSKK------------RKHSESPPSTLN 267
L H + Q Q L Q +L ++P K + H ++ S L
Sbjct: 438 LRHYEMQQQQFQHLYQEWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQ 497
Query: 268 AQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGA 327
+ +N + + + + P P PP P P P LP S+ PP P
Sbjct: 498 -EKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMP-PPVLPPSLPPPVMPPALPATV 555
Query: 328 PSPGL 332
P PG+
Sbjct: 556 PPPGM 560
Score = 33.1 bits (74), Expect = 1.6
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 34/115 (29%)
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTL--PDSPPDSGSEAYSP 149
PP N ++ GM P PG PP P PG++ P +PP
Sbjct: 1490 PPQESRLQNTSSRPGM----YPPPGSYRPP----PPMGKPPGSIVRPSAPP--------- 1532
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRD 204
R+ P T V +P PPPPP P PPPPP P ++++
Sbjct: 1533 --------ARSSVPVTRPPVPIP-----PPPPP--PPLPPPPPVIKPQTSAVEQE 1572
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 62.0 bits (149), Expect = 3e-09
Identities = 84/297 (28%), Positives = 110/297 (37%), Gaps = 61/297 (20%)
Query: 50 ISAPASSASYSHG------QPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNN 103
+S+PA S + G P+ P G+ L PP P P P +PL
Sbjct: 240 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL---- 295
Query: 104 NNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITP 163
A P P + PP P AP + TLP P S+A + + P L T
Sbjct: 296 -----ATPSP----SAPP---SPSAPPSLQTLPSPPATPPSQATT--SLGSPTLQAT--- 338
Query: 164 ETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGL 223
H +PS PP + L PPP PP P LQ A PP+ A
Sbjct: 339 ----HSFLPS------PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLA------ 382
Query: 224 VPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVT 283
T + +H LLQ A PS + SPP++ Q P ++
Sbjct: 383 --TPSPQAPNALAVH-LLQ---APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 436
Query: 284 ALPLH--------PTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGL 332
A PL P +PS PPQ P P + PL +A+ PP PP +P L
Sbjct: 437 APPLQVPPSPPASPPMSPSATPPPQAP--PPLAAPPLQLAK--PPPQAPPALATPPL 489
Score = 52.0 bits (123), Expect = 3e-06
Identities = 68/285 (23%), Positives = 93/285 (32%), Gaps = 47/285 (16%)
Query: 75 LSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGT 134
L P PSP PL P +P N + PF PP++A P++P
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSP-QAPNALAVHLLQAPFSPPPSPPVQA----PFSPPA 417
Query: 135 LPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPP 194
P P + + +P + P L + PP PPA P P PP
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPL------------------QVPPSPPASPPMSPSATPP 459
Query: 195 PPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSK 254
P P L A+PP A+ T Q L + P PS
Sbjct: 460 PQAPPPLAAPPLQLAKPPPQAPPALA----------TPPLQALPSPPASFPGQAPFSPSA 509
Query: 255 KRKHS--ESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPL 312
S +PP + +++ P + L R P P P P L L
Sbjct: 510 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---RLTL 566
Query: 313 SIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQ 357
++A PG P P S +LSG L + S P +
Sbjct: 567 ALA---------PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 602
Score = 40.4 bits (93), Expect = 0.010
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 805 AVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLRQSPLTTGLPGIQPSLLLVTTSLTS 864
A++T L AL P PP P+S + L SPL T P P L +
Sbjct: 483 ALATPPLQAL--PSPPASFPGQAPFSPSA----SLPMSPLATPPPQAPPVLAAPLLQVPP 536
Query: 865 SAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGP 923
S P S TL P P P T+ +GP L + PG PS SPS+ SGP
Sbjct: 537 SPPASP--TLQAPRRPPTP-----GPDTS-VSGPRLTLALAPGPPPPPSRSPSSTLSGP 587
Score = 32.3 bits (72), Expect = 2.7
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 29/129 (22%)
Query: 38 SKEDASDLCFPDISAPASSASYSHGQPAM--PGSSGVHHLSPPGGG------PSPGRHGP 89
S+ +S L PD++ +SSA+ + + G G SPP P+ GP
Sbjct: 577 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 636
Query: 90 LPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP----------PIKAEPKAPYAPGTLP--D 137
PP + G AP P+P TGP + A APG L
Sbjct: 637 APPLAF---------RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGP 687
Query: 138 SPPDSGSEA 146
SP SG +A
Sbjct: 688 SPGTSGGKA 696
Score = 31.6 bits (70), Expect = 4.5
Identities = 74/307 (24%), Positives = 99/307 (32%), Gaps = 50/307 (16%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPK 112
P S+ + + P +SG +PP SPG P+ PG + +
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPG---PVSSPGRAS-----------GTTR 116
Query: 113 PFP-GGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGV 171
P P G G I AE A G ++P S A + + + P TP G
Sbjct: 117 PGPLGQKGLRISAEETV--ARGKATEAPKRSALSAGARRDTSGP------TP------GT 162
Query: 172 PS----RLEHPPPPPAHLPGPPP-----PPPPPPHYPVLQRDLYMKAEPP--IPHYAAMG 220
PS R LP P P PP P V + EP + G
Sbjct: 163 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 222
Query: 221 QGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPG 280
GL S + G P S+ P L A +
Sbjct: 223 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKD 282
Query: 281 TVTAL-PLH--PTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSD 337
AL PL P PSP PP SP S P S+ + +PP PP + L +
Sbjct: 283 AAPALGPLSSSPLATPSPSAPP----SP---SAPPSLQTLPSPPATPPSQATTSLGSPTL 335
Query: 338 SLSGSYL 344
+ S+L
Sbjct: 336 QATHSFL 342
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 61.2 bits (147), Expect = 5e-09
Identities = 93/339 (27%), Positives = 115/339 (33%), Gaps = 63/339 (18%)
Query: 50 ISAPASSASYSHGQPAM-PGSSGVHHLSP-PGGGPSPG----RHGPLP-PPGYGTPLNCN 102
+S P + H P+ PG S L P PG GPSPG GP P PP P+
Sbjct: 1 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM 60
Query: 103 NN-----NGMGAAPKPFPGGTGPPI---------KAEPKAPYAPGT-LPDSPPDSGSEAY 147
+ GM KP G I K P PG P SP D S+ Y
Sbjct: 61 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY 120
Query: 148 SPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPP-------AHLPGPP-----PPPPPP 195
PH PE HV P P PP A +PG P P P
Sbjct: 121 M-----SPHPSPLGAPE---HVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPS 172
Query: 196 PHYPVLQRDL--------YMKAEPPIP---HYAAMGQGLVP---TDLHHTQQSQMLHQLL 241
P PV L + P+P A G+ +P QQ Q Q
Sbjct: 173 PFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQ 232
Query: 242 QQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP-PWPPQ 300
QQ + P + + + P+ +N +G PG + P P + P P P
Sbjct: 233 QQQQQQPQQQPPQPQTQQQQQPALVNYNRPSG-----PGPELSGPSTPQKLPVPAPGGRP 287
Query: 301 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGL-LQDSDS 338
P P P + + P PG PSP L LQ S
Sbjct: 288 SPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQS 326
Score = 33.9 bits (76), Expect = 0.92
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 888 SSPTTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGPS 924
+ P P GPS GP +PG +L PSP P GPS
Sbjct: 5 TDPGAMPHPGPSPGPGPSPGPILGPSPGP-----GPS 36
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 61.2 bits (147), Expect = 5e-09
Identities = 93/339 (27%), Positives = 115/339 (33%), Gaps = 63/339 (18%)
Query: 50 ISAPASSASYSHGQPAM-PGSSGVHHLSP-PGGGPSPG----RHGPLP-PPGYGTPLNCN 102
+S P + H P+ PG S L P PG GPSPG GP P PP P+
Sbjct: 1 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM 60
Query: 103 NN-----NGMGAAPKPFPGGTGPPI---------KAEPKAPYAPGT-LPDSPPDSGSEAY 147
+ GM KP G I K P PG P SP D S+ Y
Sbjct: 61 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY 120
Query: 148 SPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPP-------AHLPGPP-----PPPPPP 195
PH PE HV P P PP A +PG P P P
Sbjct: 121 M-----SPHPSPLGAPE---HVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPS 172
Query: 196 PHYPVLQRDL--------YMKAEPPIP---HYAAMGQGLVP---TDLHHTQQSQMLHQLL 241
P PV L + P+P A G+ +P QQ Q Q
Sbjct: 173 PFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQ 232
Query: 242 QQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP-PWPPQ 300
QQ + P + + + P+ +N +G PG + P P + P P P
Sbjct: 233 QQQQQQPQQQPPQPQTQQQQQPALVNYNRPSG-----PGPELSGPSTPQKLPVPAPGGRP 287
Query: 301 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGL-LQDSDS 338
P P P + + P PG PSP L LQ S
Sbjct: 288 SPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQS 326
Score = 33.9 bits (76), Expect = 0.92
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 888 SSPTTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGPS 924
+ P P GPS GP +PG +L PSP P GPS
Sbjct: 5 TDPGAMPHPGPSPGPGPSPGPILGPSPGP-----GPS 36
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 60.8 bits (146), Expect = 7e-09
Identities = 87/291 (29%), Positives = 103/291 (35%), Gaps = 74/291 (25%)
Query: 64 PAMPGSSGVHHLSP-PGGG-----PSPGRHGPLPPP--GYGTPLNCNNNNGMGAAPKPFP 115
P +PG+ G+ L P PG G P PG P PPP G G PL P P P
Sbjct: 924 PPLPGA-GILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPL-----------PPPLP 971
Query: 116 GGTGPPIKAEPKA-----PYAPGT-LPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHV 169
G PP P A P PG +P PP G+ P + + P L
Sbjct: 972 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP---PPPPLPGA 1028
Query: 170 GVPSRLEHPPPPPAHLPGPPPPP-------PPPPHYPVLQRDLYMKAEPPIPHYAAMGQG 222
G+P PPPP G PPPP PPPP P + PP+P G G
Sbjct: 1029 GIP------PPPPLPGAGIPPPPPLPGAGIPPPPPLP----GAGIPPPPPLP-----GAG 1073
Query: 223 LVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTV 282
+ P GA +P P PP G+ P
Sbjct: 1074 IPPPP--------------PLPGAGIPPPPPLPGAGIPPPPPLPGV----GIPPPPPLPG 1115
Query: 283 TALPLHPTRAPSPPWPPQGPLSPGPG-SLPLSIARVQTPPWHPPGAPSPGL 332
+P P P PP PL PG G P + RV PP PP P G+
Sbjct: 1116 AGIP-PPPPLPGAGIPPPPPL-PGAGIPPPPPLPRVGIPP--PPPLPGAGI 1162
Score = 57.8 bits (138), Expect = 6e-08
Identities = 73/262 (27%), Positives = 89/262 (33%), Gaps = 77/262 (29%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIK 123
P +PG+ + PP P G P P PG G P P P PG PP
Sbjct: 1045 PPLPGAG----IPPPPPLPGAGIPPPPPLPGAGIP-----------PPPPLPGAGIPPPP 1089
Query: 124 AEPKA-----PYAPGT-LPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
P A P PG +P PP G+ P + + P L G+P
Sbjct: 1090 PLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIP---PPPPLPGAGIP----- 1141
Query: 178 PPPPPAHLPGPPPPPP------PPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHT 231
PPPP G PPPPP PPP PP+P G G+ P
Sbjct: 1142 -PPPPLPRVGIPPPPPLPGAGIPPP--------------PPLP-----GAGIPPPP---- 1177
Query: 232 QQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTR 291
G +P P PP L G P + + + P
Sbjct: 1178 ----------PLPGVGIPPPPPLPGVGIPPPPP------LPGAGIPPPPPLPGMGIPP-- 1219
Query: 292 APSPPWPPQGPLSPGPGSLPLS 313
AP+PP PP G P P LP+S
Sbjct: 1220 APAPPLPPPGTGIPPPPLLPVS 1241
Score = 45.1 bits (105), Expect = 4e-04
Identities = 75/299 (25%), Positives = 95/299 (31%), Gaps = 75/299 (25%)
Query: 49 DISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMG 108
D P S S P++ S+G G+ G PP T ++ + +
Sbjct: 799 DSHQPTQSISQPPPPPSLLWSAG------------QGQPGSQPPHSISTEFQTSHEHSVS 846
Query: 109 AAPK-----PFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITP 163
+A K P P PP+ + PG PP P L +T
Sbjct: 847 SAFKNSCNIPSP----PPLPCTESSSSMPGLGMVPPP--------------PPPLPGMTV 888
Query: 164 ETLCHVGVPSR-----LEHPPPPPAHLPGPPPPPPPP-PHYPVLQRDLYMKAEPPIPHYA 217
TL +P E PPPP LPG PPPPP P +L PP+P
Sbjct: 889 PTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPL-------PPLP--- 938
Query: 218 AMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQ 277
G G+ P GA +P P PP A +
Sbjct: 939 --GAGIPPPP--------------PLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP 982
Query: 278 EPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPP-----WHPPGAPSPG 331
G PL P PP P + P P PL A + PP PP P PG
Sbjct: 983 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPP---PLPGAGIPPPPPLPGAGIPPPPPLPG 1038
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 60.8 bits (146), Expect = 7e-09
Identities = 76/289 (26%), Positives = 91/289 (31%), Gaps = 68/289 (23%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNG-MGAAP 111
P + S G P PG P G P G PPP G P G P
Sbjct: 61 PPQGGNQSQGPPPRPGK-------PEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGP 113
Query: 112 KPFPGGT-GPPIKAEPKA---PYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLC 167
P PG GPP + ++ P PG PP G+++ P
Sbjct: 114 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR--------------- 158
Query: 168 HVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTD 227
P + E PPP + PPP P P P Q + PP P +G P
Sbjct: 159 ----PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRP---GKPEGPPPQG 211
Query: 228 LHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPL 287
+ +Q P P K E PPS G Q P P
Sbjct: 212 GNQSQGP--------------PPRPGKP----EGPPSQ------GGNKPQGPPPHPGKPQ 247
Query: 288 HPT-------RAPSPPWPPQGPLSPGPG---SLPLSIARVQTPPWHPPG 326
P + P PP PQGP PG LP + Q PP P G
Sbjct: 248 GPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
Score = 53.9 bits (128), Expect = 9e-07
Identities = 48/157 (30%), Positives = 53/157 (33%), Gaps = 30/157 (19%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNG-MGAAP 111
P + S G P PG P G P G PPP G P G P
Sbjct: 166 PPQGGNQSQGPPPHPGK-------PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 218
Query: 112 KPFPGGT-GPPIKAEPKA---PYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLC 167
P PG GPP + K P PG PP G++ P P
Sbjct: 219 PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQ----------- 267
Query: 168 HVGVP---SRLEHPPPPPAHLPGPPPPPPP--PPHYP 199
G P + P PPPA P PPPPP PH P
Sbjct: 268 --GPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP 302
Score = 49.3 bits (116), Expect = 2e-05
Identities = 45/147 (30%), Positives = 52/147 (35%), Gaps = 29/147 (19%)
Query: 53 PASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNG-MGAAP 111
P + S G P PG P G P G PPP G P + G P
Sbjct: 187 PPQGGNQSQGPPPRPGK-------PEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP 239
Query: 112 KPFPGGT-GPPIKA--EPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCH 168
P PG GPP + +P+ P PG P PP G +PQQ P + P
Sbjct: 240 PPHPGKPQGPPPQEGNKPQRPPPPGR-PQGPPPPGG---NPQQPLPPPAGKPQGP----- 290
Query: 169 VGVPSRLEHPPPPPAHLPGPPPPPPPP 195
PPPP P PP PP
Sbjct: 291 ---------PPPPQGGRPHRPPQGQPP 308
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 60.5 bits (145), Expect = 9e-09
Identities = 62/208 (29%), Positives = 79/208 (37%), Gaps = 46/208 (22%)
Query: 76 SPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTL 135
+PP PS G P PPP + + G P P G PP P AP
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNS----------GPPPPPARGRGAPP----PPPSRAPTAA 321
Query: 136 PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPG------PP 189
P PP S P P+ + P L S PPPPP + G PP
Sbjct: 322 PPPPPPSRPSVAVPPP--PPNRMYPPPPPAL----PSSAPSGPPPPPPSVLGVGPVAPPP 375
Query: 190 PPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELP 249
PPPPPPP P PP P + G VPT + ++ +L Q+ + GA+L
Sbjct: 376 PPPPPPPPGP-----------PPPPGLPSDGDHQVPTTAGN--KAALLDQI--REGAQL- 419
Query: 250 THPSKKRKHSESPPSTLNAQMLNGMIKQ 277
KK + + P S L I+Q
Sbjct: 420 ----KKVEQNSRPVSCSGRDALLDQIRQ 443
Score = 59.3 bits (142), Expect = 2e-08
Identities = 55/166 (33%), Positives = 62/166 (37%), Gaps = 44/166 (26%)
Query: 174 RLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQ 233
R + PPPPP GPPPPPPPP + PP P A G+G P
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPP----------HNSGPPPPP---ARGRGAPPPPPSRAPT 319
Query: 234 SQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAP 293
+ A P PS+ PP N M P P P+ AP
Sbjct: 320 A-----------APPPPPPSRPSVAVPPPPP-------NRMYPPPP------PALPSSAP 355
Query: 294 S-PPWPPQGPLSPGPGSLPLSIARVQTPPWHPPG-APSPGLLQDSD 337
S PP PP L GP + P PP PPG P PGL D D
Sbjct: 356 SGPPPPPPSVLGVGPVAPP-----PPPPPPPPPGPPPPPGLPSDGD 396
Score = 54.3 bits (129), Expect = 7e-07
Identities = 46/134 (34%), Positives = 50/134 (37%), Gaps = 21/134 (15%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPP--GYGTPLNCNNNNGMGAAPKPFPGGTGPP 121
P P S G PP P P GP PPP G G P + A P P P + P
Sbjct: 278 PPPPPSRG----GPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPP--SRPS 331
Query: 122 IKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPP 181
+ P P P PP S A S P +L GV PPPP
Sbjct: 332 VAVPPPPPNR--MYPPPPPALPSSAPSGPPPPPPSVL-----------GVGPVAPPPPPP 378
Query: 182 PAHLPGPPPPPPPP 195
P PGPPPPP P
Sbjct: 379 PPPPPGPPPPPGLP 392
Score = 40.0 bits (92), Expect = 0.013
Identities = 39/152 (25%), Positives = 43/152 (28%), Gaps = 53/152 (34%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGM 107
P S P + G P P S PP P P PPP P
Sbjct: 294 PHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYP--------- 344
Query: 108 GAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLC 167
P P P + P PP P ++
Sbjct: 345 ------------------PPPPALPSSAPSGPPP--------------------PPPSVL 366
Query: 168 HVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYP 199
VG P PPPPP PPP PPPPP P
Sbjct: 367 GVG-PVAPPPPPPPP-----PPPGPPPPPGLP 392
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 60.5 bits (145), Expect = 9e-09
Identities = 56/175 (32%), Positives = 69/175 (39%), Gaps = 25/175 (14%)
Query: 172 PSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPP------IPHYAAMGQGLVP 225
P + PPPPP PPPPPPPP P Q MK+ PP +P G V
Sbjct: 759 PPPQQPPPPPPPQQQQQPPPPPPPPSMP-QQAAPAMKSSPPPFIATQVPVLEPQLPGSVF 817
Query: 226 TDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTAL 285
+ H Q +L ELP H + +HS P +A + P AL
Sbjct: 818 DPIGHFTQ-----PILHLPQPELPPHLPQPPEHSTPPHLNQHA------VVSPPALHNAL 866
Query: 286 PLHPTRAPSPPWPPQGPLSPGPGSLP-LSIARVQTP--PWHPPGAPSPGLLQDSD 337
P P+R P L P P P +S A QTP P P P LL+D +
Sbjct: 867 PQQPSR----PSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEE 917
Score = 51.6 bits (122), Expect = 4e-06
Identities = 74/309 (23%), Positives = 101/309 (32%), Gaps = 64/309 (20%)
Query: 63 QPAMPGSSGVHHLSPPGGGPSP--GRHGPLPPPGYGTPL----NCNNNNGMGAAPKPF-P 115
QP +P H PP P +H + PP L + +N PKP P
Sbjct: 832 QPELPP----HLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARP 887
Query: 116 GGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRL 175
P + P P P PP E P + + + L V P+
Sbjct: 888 PAVSPALTQTPLLPQPPMA---QPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPT-- 942
Query: 176 EHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQ 235
P P + PPPP PPP +P +Q+ L + PP P Q P H +
Sbjct: 943 --PLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPP-----PQPQPPPQQQHQPPPR 995
Query: 236 MLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP 295
+H P + H + PP P + P
Sbjct: 996 PVH-----------LQPMQFSTHIQQPP-------------------------PPQGQQP 1019
Query: 296 PWPPQG--PLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDS--LSGSYLDPNYQSI 351
P PP G P P P I +P H S G L+++ S + S +QS+
Sbjct: 1020 PHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSL 1079
Query: 352 KWQ-PHQQN 359
Q P QQN
Sbjct: 1080 THQSPPQQN 1088
Score = 47.0 bits (110), Expect = 1e-04
Identities = 65/252 (25%), Positives = 84/252 (33%), Gaps = 31/252 (12%)
Query: 102 NNNNGMGAAPKPFPGGTGPPIKAEPKAP----YAPGTLPDSPPDSGSEAYSPQQVNEPHL 157
+++ M AP P P PP + P P P PP +A + + P
Sbjct: 741 HHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPF 800
Query: 158 LRTITP--ETLCHVGVPSRLEHPPPPPAHLPGPPPP---PPPPPHYPVLQRDLYMKAEPP 212
+ T P E V + H P HLP P P P PP H + + PP
Sbjct: 801 IATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPP 860
Query: 213 IPHYAAMGQ---------GLVPTDLHHTQQSQMLHQ--LLQQHGAELPTHPSKKRKHSES 261
H A Q L P S L Q LL Q P + + +
Sbjct: 861 ALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPA 920
Query: 262 PPSTLNAQM---LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQ 318
PP T + QM L + K +P T + P PP PP P + Q
Sbjct: 921 PPLT-SMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPP-------PPHPSVQQQLQQ 972
Query: 319 TPPWHPPGAPSP 330
PP PP P P
Sbjct: 973 QPPPPPPPQPQP 984
Score = 41.6 bits (96), Expect = 0.004
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 124 AEPKAPYAPGTLPDS-PPDSGSEAYSPQQVNE-PHLLRTITPETLCHVGVPSRLEHPPPP 181
A+P P T S PP + + +P V PH +TP+ + V + + PP
Sbjct: 189 AKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVV---PPQ 245
Query: 182 PAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPI 213
P P P PP P PP P Q +++ PPI
Sbjct: 246 PLQTPPPVPPQPQPPPAPAPQP---VQSHPPI 274
Score = 33.5 bits (75), Expect = 1.2
Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 23/157 (14%)
Query: 65 AMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPL-------NCNNNNGMGAAPKPFPGG 117
A PG S V + + P P PPP TP + + P P
Sbjct: 189 AKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQ 248
Query: 118 TGPPIKAEPKAPYAPGTLP--DSPPDSGSEAYSPQQVNEPHLLR----TITPETLCHVGV 171
T PP+ +P+ P AP P PP A +PQ V ++ T TP T+ +
Sbjct: 249 TPPPVPPQPQPPPAPAPQPVQSHPP---IIAATPQPVKTKKGVKRKADTTTPTTIDPIHE 305
Query: 172 PSRLEHPPPPPAHLPG-----PPPPPPPPPHYPVLQR 203
P L PP P G P PP P Q+
Sbjct: 306 PPSL--PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQ 340
Score = 31.2 bits (69), Expect = 5.9
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 274 MIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSP--- 330
+I Q P +T +P P + P PP PPQ P P P VQ+ P P P
Sbjct: 232 LIVQTP-VMTVVPPQPLQTP-PPVPPQPQPPPAPAPQP-----VQSHPPIIAATPQPVKT 284
Query: 331 --GLLQDSDSLSGSYLDPNYQ 349
G+ + +D+ + + +DP ++
Sbjct: 285 KKGVKRKADTTTPTTIDPIHE 305
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 59.3 bits (142), Expect = 2e-08
Identities = 69/258 (26%), Positives = 90/258 (34%), Gaps = 57/258 (22%)
Query: 58 SYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGG 117
S+ H P++ G G H + GP P P PPP M P P PG
Sbjct: 396 SFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP-------------MNQGPHP-PGH 441
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
GPP P Y L +P SG V H + + P P +
Sbjct: 442 HGPP----PMDQY----LGSTPVGSG--------VYRLHQGKGMMPPP------PMGMMP 479
Query: 178 PPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQML 237
PPPPP G PPPPP P P Q+ PP P + +P + T +
Sbjct: 480 PPPPPPS--GQPPPPPSGP-LPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTT--- 533
Query: 238 HQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHP-TRAPSPP 296
+P ++ + SP + Q G T +PL P + P PP
Sbjct: 534 ---TSAGTGSIPPWQQQQAAAAASPGA-----------PQMQGNPTMVPLPPGVQPPLPP 579
Query: 297 WPPQGPLSPGPGSLPLSI 314
P P P PGS + I
Sbjct: 580 GAPPPPPPPPPGSAGMMI 597
Score = 46.2 bits (108), Expect = 2e-04
Identities = 65/266 (24%), Positives = 85/266 (31%), Gaps = 73/266 (27%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAP---KPFPGGTGP 120
PA GS+ +P P P PPP + M + P +P+ G G
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGG 385
Query: 121 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP 180
P PG P S PH L ++T H G P + P
Sbjct: 386 -------GPGGPGGGPHS---------------FPHPLPSLTGG---HGGHPMQHNPNGP 420
Query: 181 PPAHLPGPPPP----PPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQM 236
PP + PPPP P PP H+ D Y+ + P +G G+
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTP-------VGSGV------------- 460
Query: 237 LHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPP 296
++L Q G P PP GM+ P + P P P PP
Sbjct: 461 -YRLHQGKGMMPP------------PPM--------GMMPPPPPPPSGQPPPPPSGPLPP 499
Query: 297 WPPQGPLSPGPGSLPLSIARVQTPPW 322
W Q P P S+A PW
Sbjct: 500 WQQQQQQPPPPPPPSSSMASSTPLPW 525
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 58.5 bits (140), Expect = 3e-08
Identities = 84/311 (27%), Positives = 112/311 (36%), Gaps = 59/311 (18%)
Query: 50 ISAPASSASYSHG------QPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNN 103
+S+PA S + G P+ P G+ L PP P P P +PL +
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 104 NNG--MGAAPKPFPGGT---------GPPIKAEPKAPYAPG---TLPDSPPDSGSEAYSP 149
+ AP P P+ P +P AP TLP P S+A +
Sbjct: 309 PSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATT- 367
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKA 209
+ P L T H +PS PP + L PPP PP P LQ A
Sbjct: 368 -SLGSPTLQAT-------HSFLPS------PPLSPLATPPPQAPPALALPPLQAPPSPPA 413
Query: 210 EPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQ 269
PP+ A T + +H LLQ A PS + SPP++
Sbjct: 414 SPPLSPLA--------TPSPQAPNALAVH-LLQ---APFSPPPSPPVQAPFSPPASPPVS 461
Query: 270 MLNGMIKQEPGTVTALPLH--------PTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPP 321
Q P ++ A PL P +PS PPQ P P + PL +A+ PP
Sbjct: 462 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP--PPLAAPPLQLAK--PPP 517
Query: 322 WHPPGAPSPGL 332
PP +P L
Sbjct: 518 QAPPALATPPL 528
Score = 57.4 bits (137), Expect = 8e-08
Identities = 74/271 (27%), Positives = 99/271 (36%), Gaps = 31/271 (11%)
Query: 82 PSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPD 141
PSP P G G + + A P P +GP + P+AP P P
Sbjct: 220 PSPAARRR-PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP----AHPSQPKP 274
Query: 142 SGSEAYSPQQVNEPH--LLRTITPETLCHVGVPS-----RLEHPPPPPA---------HL 185
G +A P QV P + P + + PS + + PP PA L
Sbjct: 275 KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQL 334
Query: 186 PGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHG 245
P P PP P P + L P P A G H+ L
Sbjct: 335 ATPLPLAPPSPSAPPSLQTLPSPPATP-PSQATTSLGSPTLQATHSFLPSPPLSPLATPP 393
Query: 246 AELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAP--SPPWPP-QGP 302
+ P P+ ++PPS + L+ + P AL +H +AP PP PP Q P
Sbjct: 394 PQAP--PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP 451
Query: 303 LSPGPGSLPLSIARVQTPPWH-PPGAPSPGL 332
SP P S P+S + TPP PP +P L
Sbjct: 452 FSP-PASPPVSPS--ATPPSQAPPSLAAPPL 479
Score = 52.0 bits (123), Expect = 3e-06
Identities = 68/285 (23%), Positives = 93/285 (32%), Gaps = 47/285 (16%)
Query: 75 LSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGT 134
L P PSP PL P +P N + PF PP++A P++P
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSP-QAPNALAVHLLQAPFSPPPSPPVQA----PFSPPA 456
Query: 135 LPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPP 194
P P + + +P + P L + PP PPA P P PP
Sbjct: 457 SPPVSPSATPPSQAPPSLAAPPL------------------QVPPSPPASPPMSPSATPP 498
Query: 195 PPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSK 254
P P L A+PP A+ T Q L + P PS
Sbjct: 499 PQAPPPLAAPPLQLAKPPPQAPPALA----------TPPLQALPSPPASFPGQAPFSPSA 548
Query: 255 KRKHS--ESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPL 312
S +PP + +++ P + L R P P P P L L
Sbjct: 549 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---RLTL 605
Query: 313 SIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQ 357
++A PG P P S +LSG L + S P +
Sbjct: 606 ALA---------PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 641
Score = 40.4 bits (93), Expect = 0.010
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 805 AVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLRQSPLTTGLPGIQPSLLLVTTSLTS 864
A++T L AL P PP P+S + L SPL T P P L +
Sbjct: 522 ALATPPLQAL--PSPPASFPGQAPFSPSA----SLPMSPLATPPPQAPPVLAAPLLQVPP 575
Query: 865 SAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGP 923
S P S TL P P P T+ +GP L + PG PS SPS+ SGP
Sbjct: 576 SPPASP--TLQAPRRPPTP-----GPDTS-VSGPRLTLALAPGPPPPPSRSPSSTLSGP 626
Score = 38.1 bits (87), Expect = 0.049
Identities = 82/355 (23%), Positives = 107/355 (30%), Gaps = 81/355 (22%)
Query: 51 SAPASSASYSHGQPAM-PGSSGVHHLSPPGGGPSPG------------RHGPL------- 90
+ P SA S PA P +SG +PP SPG R GPL
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 91 ------------------------------PPPGYGTPLNCNNNNGMG---AAPKPFPGG 117
P PG +P + G P+P P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSP------QQVNEPHLLRTITPETL----- 166
P P+ + + + S + P Q+ L + TP +
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 167 -CHVGVPSRLEHP-PPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEP-PIPHYAAMGQGL 223
G P HP P P L PP PP + + P P +A Q
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316
Query: 224 VPTDLHHTQQSQMLHQLLQQHGAELPTHPS--KKRKHSESPPSTLNAQMLNGM----IKQ 277
P L T S L L P PS + SPP+T +Q + ++
Sbjct: 317 APPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA 376
Query: 278 EPGTVTALPLHPTRAPSPPWPPQGPLSP--GPGSLPLSIARVQTPPWHPPGAPSP 330
+ + PL P P P PP L P P S P S PP P PSP
Sbjct: 377 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS------PPLSPLATPSP 425
Score = 32.3 bits (72), Expect = 2.7
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 29/129 (22%)
Query: 38 SKEDASDLCFPDISAPASSASYSHGQPAM--PGSSGVHHLSPPGGG------PSPGRHGP 89
S+ +S L PD++ +SSA+ + + G G SPP P+ GP
Sbjct: 616 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 675
Query: 90 LPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP----------PIKAEPKAPYAPGTLP--D 137
PP + G AP P+P TGP + A APG L
Sbjct: 676 APPLAF---------RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGP 726
Query: 138 SPPDSGSEA 146
SP SG +A
Sbjct: 727 SPGTSGGKA 735
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 58.5 bits (140), Expect = 3e-08
Identities = 68/251 (27%), Positives = 82/251 (32%), Gaps = 59/251 (23%)
Query: 77 PPGGGPSP---GRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIK-AEPKAPYAP 132
PP P+P LPPPG P G P P PG P I A P P P
Sbjct: 216 PPPSAPNPVVSSLGSGLPPPGMPPP-------GSFPPPVPPPGALPPGIPPAMPPPPMPP 268
Query: 133 GTLPDSPPDSGSEA--YSPQQVNEPHLLRTITPETLCHVGV---------PSRLEHPPPP 181
G PP +G+ + + PH P + H G+ P L HP
Sbjct: 269 GAAGHGPPSAGTPGAGHPGHGHSHPH---PFPPGGMPHPGMSQMQLAHHGPHGLGHPHAG 325
Query: 182 PAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLL 241
P G PPP PPP +PH G+ P
Sbjct: 326 PPGSGGQPPPRPPPG----------------MPHPGPPPMGMPPRGPPFGSP-------- 361
Query: 242 QQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTR-APSPPWPPQ 300
H +P H + PP + G + P PL P R P PP PP+
Sbjct: 362 MGHPGPMPPHGMR------GPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPR 415
Query: 301 GPLSPGPGSLP 311
GPL G LP
Sbjct: 416 GPLR---GPLP 423
Score = 55.1 bits (131), Expect = 4e-07
Identities = 57/170 (33%), Positives = 63/170 (37%), Gaps = 38/170 (22%)
Query: 53 PASSASYSHGQPAM-------PGSSGVH-HLSPPGGGPSPG-------RHGP--LPPPGY 95
P + HG P+ PG H H PPGG P PG HGP L P
Sbjct: 265 PMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHA 324
Query: 96 GTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEP 155
G P G G P P P PP P P P +P P GS P + P
Sbjct: 325 GPP-------GSGGQPPPRP----PPGMPHPGPP--PMGMPPRGPPFGSPMGHPGPM-PP 370
Query: 156 HLLRTITPETLCH--VGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQR 203
H +R P H G P PPP + GP PPP P P PV R
Sbjct: 371 HGMRGPPPLMPPHGYTGPPR-----PPPYGYQRGPLPPPRPTPRPPVPPR 415
Score = 46.6 bits (109), Expect = 1e-04
Identities = 54/183 (29%), Positives = 59/183 (32%), Gaps = 33/183 (18%)
Query: 172 PSRLEHPPPPPAHLP-GPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQG----LVPT 226
P P PPP LP G PP PPPP P A P + G P
Sbjct: 240 PGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPG 299
Query: 227 DLHHTQQSQML------HQLLQQH------GAELPTHPSKKRKHSESPPSTLNAQMLNGM 274
+ H SQM H L H G + P P H PP GM
Sbjct: 300 GMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPM--------GM 351
Query: 275 IKQEP------GTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP-PGA 327
+ P G +P H R P P PP G P P P R PP P P
Sbjct: 352 PPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGP-PRPPPYGYQRGPLPPPRPTPRP 410
Query: 328 PSP 330
P P
Sbjct: 411 PVP 413
Score = 35.0 bits (79), Expect = 0.41
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 293 PSPPWPPQG---PLSPGPGSLPLSIARVQTPPWHPPGAPSPG 331
P P PP G P P PG+LP I PP PPGA G
Sbjct: 233 PPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHG 274
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 58.5 bits (140), Expect = 3e-08
Identities = 76/256 (29%), Positives = 95/256 (37%), Gaps = 46/256 (17%)
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSP--PDSGSEAYSP 149
PP P G+ AP P GT P+ P PG P + P GS S
Sbjct: 184 PPALQAP------TGVTPAPSSAPPGT-------PQLP-TPGPTPSATAVPPQGSPTAS- 228
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKA 209
Q N+P P T H+ L HP PP+ P PPP P PH P LQ
Sbjct: 229 QAPNQPQAPTAPVPHT--HIQQAPAL-HPQRPPS----PHPPPHPSPH-PPLQPLTGSAG 280
Query: 210 EPPIPHYA---AMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
+P P +A GQG P H Q LLQ G P + ++P T
Sbjct: 281 QPSAPSHAQPPLHGQG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTS 334
Query: 267 NAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP-P 325
A P T LP + S P + PL P P ++P ++ PP P P
Sbjct: 335 PAAAY-------PHTSLQLPASQSALQSQQPPREQPLPPAPLAMP----HIKPPPTTPIP 383
Query: 326 GAPSPGLLQDSDSLSG 341
P+P + LSG
Sbjct: 384 QLPAPQAHKHPPHLSG 399
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/204 (26%), Positives = 69/204 (33%), Gaps = 37/204 (18%)
Query: 138 SPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPP---- 193
SP D+ S++ S Q +L+ P GV PP LP P P P
Sbjct: 163 SPQDNESDSDSSAQ---QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV 219
Query: 194 PPPHYPVLQRDLYMKAEP--PIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTH 251
PP P + P P+PH H QQ+ LH + P H
Sbjct: 220 PPQGSPTASQAPNQPQAPTAPVPH-------------THIQQAPALHP-QRPPSPHPPPH 265
Query: 252 PSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPL-----SPG 306
PS H P T +A + +P PLH P P GPL P
Sbjct: 266 PS---PHPPLQPLTGSAGQPSAPSHAQP------PLHGQGPPGPHSLQAGPLLQHPGPPQ 316
Query: 307 PGSLPLSIARVQTPPWHPPGAPSP 330
P LP ++ Q P P A P
Sbjct: 317 PFGLPPQASQGQAPLGTSPAAAYP 340
Score = 43.1 bits (100), Expect = 0.002
Identities = 59/240 (24%), Positives = 83/240 (34%), Gaps = 31/240 (12%)
Query: 43 SDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPL----PPPGYG-T 97
+ L P + S QP P + H+ PP P P P PP G +
Sbjct: 342 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 401
Query: 98 PLNCNNNNGMGAAPKPF--------PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSP 149
P + N N A KP P PP++ P++ P + P + S+ P
Sbjct: 402 PFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 461
Query: 150 QQVNEPHL-LRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPP--PPPPPHYPVLQRDLY 206
+ P L + P+ P +HP +PG PPP PP P
Sbjct: 462 PPASHPPTGLHQVAPQ-------PPFAQHP-----FVPGGPPPITPPTCPSTSTPPAGPG 509
Query: 207 MKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
A+PP AA G + Q+ + L AE P P + S SP T+
Sbjct: 510 TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD--AEEPESPPPPPR-SPSPEPTV 566
Score = 37.0 bits (84), Expect = 0.11
Identities = 56/209 (26%), Positives = 73/209 (34%), Gaps = 63/209 (30%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPP--GGGPSPGRH----GPL-----PPPGYG 96
P P + S GQP+ P H PP G GP PG H GPL PP +G
Sbjct: 266 PSPHPPLQPLTGSAGQPSAPS-----HAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFG 319
Query: 97 TPLNCNNNNG-MGAAPKPFPGGTGPPIKAEPKA------------PYAPGTLPDSPPDSG 143
P + +G +P T + A A P AP +P P
Sbjct: 320 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT 379
Query: 144 S---EAYSPQQVNEPHLLRTITPETL-CHVGVPSRLE--------HPP---PPPAHL--- 185
+ + +PQ P L +P ++ ++ P L+ HPP PPP L
Sbjct: 380 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 439
Query: 186 -------PGPPP--------PPPPPPHYP 199
P PP PPPP H P
Sbjct: 440 SQPLPSSPAQPPGLTQSQNLPPPPASHPP 468
Score = 33.5 bits (75), Expect = 1.2
Identities = 64/279 (22%), Positives = 91/279 (32%), Gaps = 35/279 (12%)
Query: 60 SHGQPAMPGSSGVHHLSPPGGG-PSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGT 118
S QP PG + +L PP P G H P P + A PF G
Sbjct: 446 SPAQP--PGLTQSQNLPPPPASHPPTGLHQVAPQPPF--------------AQHPFVPGG 489
Query: 119 GPPIK-----AEPKAPYAPGTLPDSPPDSGSEAYSPQQVNE---PHLLRTITPETLCHVG 170
PPI + P PGT PP SG+ A P I E L
Sbjct: 490 PPPITPPTCPSTSTPPAGPGTSAQ-PPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 548
Query: 171 VPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHH 230
P E PPPPP P P P P + Y + A +P L
Sbjct: 549 EP---ESPPPPP-RSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMP--LAG 602
Query: 231 TQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPT 290
++ ++ + +++ E ++R+ + + + E + H
Sbjct: 603 SKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERER-EAERAAKASSSAHEG 661
Query: 291 RAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
R P G + P P +IA V PP+ P P+
Sbjct: 662 RLSDPQLSGPGHMRPSFEPPPTTIAAV--PPYIGPDTPA 698
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 58.5 bits (140), Expect = 3e-08
Identities = 76/256 (29%), Positives = 95/256 (37%), Gaps = 46/256 (17%)
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSP--PDSGSEAYSP 149
PP P G+ AP P GT P+ P PG P + P GS S
Sbjct: 738 PPALQAP------TGVTPAPSSAPPGT-------PQLP-TPGPTPSATAVPPQGSPTAS- 782
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKA 209
Q N+P P T H+ L HP PP+ P PPP P PH P LQ
Sbjct: 783 QAPNQPQAPTAPVPHT--HIQQAPAL-HPQRPPS----PHPPPHPSPH-PPLQPLTGSAG 834
Query: 210 EPPIPHYA---AMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
+P P +A GQG P H Q LLQ G P + ++P T
Sbjct: 835 QPSAPSHAQPPLHGQG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTS 888
Query: 267 NAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP-P 325
A P T LP + S P + PL P P ++P ++ PP P P
Sbjct: 889 PAAAY-------PHTSLQLPASQSALQSQQPPREQPLPPAPLAMP----HIKPPPTTPIP 937
Query: 326 GAPSPGLLQDSDSLSG 341
P+P + LSG
Sbjct: 938 QLPAPQAHKHPPHLSG 953
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/204 (26%), Positives = 69/204 (33%), Gaps = 37/204 (18%)
Query: 138 SPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPP---- 193
SP D+ S++ S Q +L+ P GV PP LP P P P
Sbjct: 717 SPQDNESDSDSSAQ---QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV 773
Query: 194 PPPHYPVLQRDLYMKAEP--PIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTH 251
PP P + P P+PH H QQ+ LH + P H
Sbjct: 774 PPQGSPTASQAPNQPQAPTAPVPH-------------THIQQAPALHP-QRPPSPHPPPH 819
Query: 252 PSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPL-----SPG 306
PS H P T +A + +P PLH P P GPL P
Sbjct: 820 PS---PHPPLQPLTGSAGQPSAPSHAQP------PLHGQGPPGPHSLQAGPLLQHPGPPQ 870
Query: 307 PGSLPLSIARVQTPPWHPPGAPSP 330
P LP ++ Q P P A P
Sbjct: 871 PFGLPPQASQGQAPLGTSPAAAYP 894
Score = 43.1 bits (100), Expect = 0.002
Identities = 59/240 (24%), Positives = 83/240 (34%), Gaps = 31/240 (12%)
Query: 43 SDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPL----PPPGYG-T 97
+ L P + S QP P + H+ PP P P P PP G +
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 98 PLNCNNNNGMGAAPKPF--------PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSP 149
P + N N A KP P PP++ P++ P + P + S+ P
Sbjct: 956 PFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 1015
Query: 150 QQVNEPHL-LRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPP--PPPPPHYPVLQRDLY 206
+ P L + P+ P +HP +PG PPP PP P
Sbjct: 1016 PPASHPPTGLHQVAPQ-------PPFAQHP-----FVPGGPPPITPPTCPSTSTPPAGPG 1063
Query: 207 MKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
A+PP AA G + Q+ + L AE P P + S SP T+
Sbjct: 1064 TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD--AEEPESPPPPPR-SPSPEPTV 1120
Score = 37.0 bits (84), Expect = 0.11
Identities = 56/209 (26%), Positives = 73/209 (34%), Gaps = 63/209 (30%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPP--GGGPSPGRH----GPL-----PPPGYG 96
P P + S GQP+ P H PP G GP PG H GPL PP +G
Sbjct: 820 PSPHPPLQPLTGSAGQPSAPS-----HAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFG 873
Query: 97 TPLNCNNNNG-MGAAPKPFPGGTGPPIKAEPKA------------PYAPGTLPDSPPDSG 143
P + +G +P T + A A P AP +P P
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT 933
Query: 144 S---EAYSPQQVNEPHLLRTITPETL-CHVGVPSRLE--------HPP---PPPAHL--- 185
+ + +PQ P L +P ++ ++ P L+ HPP PPP L
Sbjct: 934 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 993
Query: 186 -------PGPPP--------PPPPPPHYP 199
P PP PPPP H P
Sbjct: 994 SQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Score = 33.5 bits (75), Expect = 1.2
Identities = 64/279 (22%), Positives = 91/279 (32%), Gaps = 35/279 (12%)
Query: 60 SHGQPAMPGSSGVHHLSPPGGG-PSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGT 118
S QP PG + +L PP P G H P P + A PF G
Sbjct: 1000 SPAQP--PGLTQSQNLPPPPASHPPTGLHQVAPQPPF--------------AQHPFVPGG 1043
Query: 119 GPPIK-----AEPKAPYAPGTLPDSPPDSGSEAYSPQQVNE---PHLLRTITPETLCHVG 170
PPI + P PGT PP SG+ A P I E L
Sbjct: 1044 PPPITPPTCPSTSTPPAGPGTSAQ-PPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 1102
Query: 171 VPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHH 230
P E PPPPP P P P P + Y + A +P L
Sbjct: 1103 EP---ESPPPPP-RSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMP--LAG 1156
Query: 231 TQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPT 290
++ ++ + +++ E ++R+ + + + E + H
Sbjct: 1157 SKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERER-EAERAAKASSSAHEG 1215
Query: 291 RAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
R P G + P P +IA V PP+ P P+
Sbjct: 1216 RLSDPQLSGPGHMRPSFEPPPTTIAAV--PPYIGPDTPA 1252
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 58.5 bits (140), Expect = 3e-08
Identities = 76/256 (29%), Positives = 95/256 (37%), Gaps = 46/256 (17%)
Query: 92 PPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSP--PDSGSEAYSP 149
PP P G+ AP P GT P+ P PG P + P GS S
Sbjct: 738 PPALQAP------TGVTPAPSSAPPGT-------PQLP-TPGPTPSATAVPPQGSPTAS- 782
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKA 209
Q N+P P T H+ L HP PP+ P PPP P PH P LQ
Sbjct: 783 QAPNQPQAPTAPVPHT--HIQQAPAL-HPQRPPS----PHPPPHPSPH-PPLQPLTGSAG 834
Query: 210 EPPIPHYA---AMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
+P P +A GQG P H Q LLQ G P + ++P T
Sbjct: 835 QPSAPSHAQPPLHGQG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTS 888
Query: 267 NAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP-P 325
A P T LP + S P + PL P P ++P ++ PP P P
Sbjct: 889 PAAAY-------PHTSLQLPASQSALQSQQPPREQPLPPAPLAMP----HIKPPPTTPIP 937
Query: 326 GAPSPGLLQDSDSLSG 341
P+P + LSG
Sbjct: 938 QLPAPQAHKHPPHLSG 953
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/204 (26%), Positives = 69/204 (33%), Gaps = 37/204 (18%)
Query: 138 SPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPP---- 193
SP D+ S++ S Q +L+ P GV PP LP P P P
Sbjct: 717 SPQDNESDSDSSAQ---QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV 773
Query: 194 PPPHYPVLQRDLYMKAEP--PIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTH 251
PP P + P P+PH H QQ+ LH + P H
Sbjct: 774 PPQGSPTASQAPNQPQAPTAPVPH-------------THIQQAPALHP-QRPPSPHPPPH 819
Query: 252 PSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPL-----SPG 306
PS H P T +A + +P PLH P P GPL P
Sbjct: 820 PS---PHPPLQPLTGSAGQPSAPSHAQP------PLHGQGPPGPHSLQAGPLLQHPGPPQ 870
Query: 307 PGSLPLSIARVQTPPWHPPGAPSP 330
P LP ++ Q P P A P
Sbjct: 871 PFGLPPQASQGQAPLGTSPAAAYP 894
Score = 43.1 bits (100), Expect = 0.002
Identities = 59/240 (24%), Positives = 83/240 (34%), Gaps = 31/240 (12%)
Query: 43 SDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPL----PPPGYG-T 97
+ L P + S QP P + H+ PP P P P PP G +
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 98 PLNCNNNNGMGAAPKPF--------PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSP 149
P + N N A KP P PP++ P++ P + P + S+ P
Sbjct: 956 PFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPP 1015
Query: 150 QQVNEPHL-LRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPP--PPPPPHYPVLQRDLY 206
+ P L + P+ P +HP +PG PPP PP P
Sbjct: 1016 PPASHPPTGLHQVAPQ-------PPFAQHP-----FVPGGPPPITPPTCPSTSTPPAGPG 1063
Query: 207 MKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTL 266
A+PP AA G + Q+ + L AE P P + S SP T+
Sbjct: 1064 TSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD--AEEPESPPPPPR-SPSPEPTV 1120
Score = 37.0 bits (84), Expect = 0.11
Identities = 56/209 (26%), Positives = 73/209 (34%), Gaps = 63/209 (30%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPP--GGGPSPGRH----GPL-----PPPGYG 96
P P + S GQP+ P H PP G GP PG H GPL PP +G
Sbjct: 820 PSPHPPLQPLTGSAGQPSAPS-----HAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFG 873
Query: 97 TPLNCNNNNG-MGAAPKPFPGGTGPPIKAEPKA------------PYAPGTLPDSPPDSG 143
P + +G +P T + A A P AP +P P
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT 933
Query: 144 S---EAYSPQQVNEPHLLRTITPETL-CHVGVPSRLE--------HPP---PPPAHL--- 185
+ + +PQ P L +P ++ ++ P L+ HPP PPP L
Sbjct: 934 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 993
Query: 186 -------PGPPP--------PPPPPPHYP 199
P PP PPPP H P
Sbjct: 994 SQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Score = 33.5 bits (75), Expect = 1.2
Identities = 64/279 (22%), Positives = 91/279 (32%), Gaps = 35/279 (12%)
Query: 60 SHGQPAMPGSSGVHHLSPPGGG-PSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGT 118
S QP PG + +L PP P G H P P + A PF G
Sbjct: 1000 SPAQP--PGLTQSQNLPPPPASHPPTGLHQVAPQPPF--------------AQHPFVPGG 1043
Query: 119 GPPIK-----AEPKAPYAPGTLPDSPPDSGSEAYSPQQVNE---PHLLRTITPETLCHVG 170
PPI + P PGT PP SG+ A P I E L
Sbjct: 1044 PPPITPPTCPSTSTPPAGPGTSAQ-PPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 1102
Query: 171 VPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHH 230
P E PPPPP P P P P + Y + A +P L
Sbjct: 1103 EP---ESPPPPP-RSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMP--LAG 1156
Query: 231 TQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPT 290
++ ++ + +++ E ++R+ + + + E + H
Sbjct: 1157 SKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERER-EAERAAKASSSAHEG 1215
Query: 291 RAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
R P G + P P +IA V PP+ P P+
Sbjct: 1216 RLSDPQLSGPGHMRPSFEPPPTTIAAV--PPYIGPDTPA 1252
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 58.2 bits (139), Expect = 5e-08
Identities = 79/301 (26%), Positives = 94/301 (31%), Gaps = 91/301 (30%)
Query: 64 PAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPF--------P 115
PA+P G + P G P HG P P G GA P
Sbjct: 963 PALP--PGSQPIPPTGAAGPPAVHGLAVAPASVVPAPA----GSGAPPGSLGPSEQIGQA 1016
Query: 116 GGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSP--QQVNEPHLLRTITPETLCHVGVPS 173
G T P + +P PG +P P G SP Q P ++ P + H GV
Sbjct: 1017 GSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS-GHPGVAG 1075
Query: 174 RLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGL-----VPTDL 228
P LP PPPPPPP P I + ++ + P +L
Sbjct: 1076 NA------PLGLPFGMPPPPPPP-------------APSIIPFGSLADSISINLPAPPNL 1116
Query: 229 HHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLH 288
H H LP P PP L M N PLH
Sbjct: 1117 HG-------------HHHHLPFAPGTL------PPPNLPVSMAN-------------PLH 1144
Query: 289 PTRAPSPPWPPQGPLSPGPGSL----PLSIARVQ--------------TPPWHPPGAPSP 330
P + P PL PG GS P +A VQ TP P APSP
Sbjct: 1145 PNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSP 1204
Query: 331 G 331
G
Sbjct: 1205 G 1205
Score = 43.9 bits (102), Expect = 9e-04
Identities = 56/198 (28%), Positives = 69/198 (34%), Gaps = 56/198 (28%)
Query: 50 ISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNC-------N 102
I S+A QPA G + P G P PG HGP P P TP + +
Sbjct: 1013 IGQAGSTAGPQQQQPAGAPQPG----AVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS 1068
Query: 103 NNNGM-GAAPKPFPGGTGPP---------------------IKAEPK-------APYAPG 133
+ G+ G AP P G PP + A P P+APG
Sbjct: 1069 GHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPG 1128
Query: 134 TLPDSPPDSGSEAYSPQQVNEPHLLRTITPETL-CHVGVPSRLEHPP-----------PP 181
TLP PP+ +P N P T P +L G+ S P P
Sbjct: 1129 TLP--PPNLPVSMANPLHPNLP--ATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS 1184
Query: 182 PAHLPGPPPPPPPPPHYP 199
+ LP P P PP P P
Sbjct: 1185 ASPLPDPGTPLPPDPTAP 1202
Score = 36.2 bits (82), Expect = 0.18
Identities = 52/175 (29%), Positives = 64/175 (36%), Gaps = 34/175 (19%)
Query: 180 PPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQ-----S 234
PPPA PG P PP P L + +P A G G P L ++Q S
Sbjct: 961 PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVP--APAGSGAPPGSLGPSEQIGQAGS 1018
Query: 235 QMLHQLLQQHGAELP-----------THPSKKRKHSESPPSTLNAQMLNGMI--KQEPGT 281
Q Q GA P H + ++PPS M+ G + PG
Sbjct: 1019 TAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPS-----MMPGAVPGSGHPGV 1073
Query: 282 VTALPLH-PTRAPSPPWPPQGPLSPGPGSLPLSIA-RVQTPP------WHPPGAP 328
PL P P PP PP + P GSL SI+ + PP H P AP
Sbjct: 1074 AGNAPLGLPFGMPPPPPPPAPSIIPF-GSLADSISINLPAPPNLHGHHHHLPFAP 1127
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 58.2 bits (139), Expect = 5e-08
Identities = 51/162 (31%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 78 PGGGPSPGRHGPLPPPGYG---TPLNCNNN-NGMGAAPKPFPGGTGPPIKAEPKAPYAPG 133
PG PGR GP PP +P+N +G AP P PP + P P P
Sbjct: 213 PGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPP------PPYRQPPGVPNGP- 265
Query: 134 TLPDSPPDSGSEAYSPQQVNEPHL-----LRTITPETLCHVGVPSRLEHPPPPPAH---- 184
S P + S PQ+ N H +R + P PS L + PPPPA
Sbjct: 266 ----SSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSAS-PSLLSNRPPPPARDPPS 320
Query: 185 ---LPGPPPP---------PPPPPHYPVLQRDLYMKAEPPIP 214
P PPPP PPPPP Y + + + +PP P
Sbjct: 321 RGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPP 362
Score = 53.1 bits (126), Expect = 1e-06
Identities = 74/321 (23%), Positives = 104/321 (32%), Gaps = 61/321 (19%)
Query: 41 DASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLN 100
D+S P++ + +P S+G+ H S P PGR PP TPL
Sbjct: 139 DSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPP----TPLP 194
Query: 101 CNNNNGMGA-APKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLR 159
+++ KP P G + + P AP P PP S P + +
Sbjct: 195 MHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPP--PVKPPPS------PVNIRTGPSGQ 246
Query: 160 TITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPP-----PHYPVLQRDLYMKAEPPIP 214
++ P PPPP PG P P P P P L+ K P+
Sbjct: 247 SLAP--------------PPPPYRQPPGVPNGPSSPTNESAPELPQRHNSLHRKTPGPV- 291
Query: 215 HYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGM 274
+GL P S + ++ P P++ PPS G
Sbjct: 292 ------RGLAPPPPTSASPSLLSNR---------PPPPAR------DPPS-------RGA 323
Query: 275 IKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQ 334
P V P PP+ G P G P +R P PP P +
Sbjct: 324 APPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHR 383
Query: 335 DSDSLSGSYLDPNYQSIKWQP 355
DS + S+LD + P
Sbjct: 384 DSITTVRSFLDDFESKYSFHP 404
Score = 44.3 bits (103), Expect = 7e-04
Identities = 82/347 (23%), Positives = 111/347 (31%), Gaps = 90/347 (25%)
Query: 43 SDLCFPDISAP-ASSASYSHGQPAMPGSSGVHH-----LSPPGGGPSPGRHGPLPPPGYG 96
+D P + P SS Y G A+ G+ L P G G P
Sbjct: 57 NDRSAPILEKPKGSSGGYGSGGAALQPKGGLFQGGVLKLRPVGA--KDGSENLAGKPALQ 114
Query: 97 TPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPH 156
P + AAP+P P+ A A G D S + ++ P
Sbjct: 115 IP------SSRAAAPRP-------PVSA------ASGRPQDDTDSSRASLPELPRMQRPS 155
Query: 157 LLRTITPETLCHVGVPSRLEHPPPPP----AHLP-------------------------- 186
L P T G+ PPPPP A+ P
Sbjct: 156 LPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQ 215
Query: 187 -------GPPPPPP-PPPHYPVLQR---DLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQ 235
GPP PPP PP PV R A PP P+ G P+ + ++
Sbjct: 216 RLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPS----SPTNE 271
Query: 236 MLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSP 295
+L Q+H + P R + PP++ + +L+ P P P+R +P
Sbjct: 272 SAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLS----NRPPPPARDP--PSRGAAP 325
Query: 296 PWPP--------QGPLSPGP----GSLPLSIARVQTPPWHPPGAPSP 330
P PP P P P GS P S + PP P P P
Sbjct: 326 PPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPP 372
Score = 37.4 bits (85), Expect = 0.083
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 22/182 (12%)
Query: 199 PVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELP------THP 252
P LQ A P P AA G+ TD L +L + LP T
Sbjct: 111 PALQIPSSRAAAPRPPVSAASGRPQDDTDSSRAS----LPELPRMQRPSLPDLSRPNTTS 166
Query: 253 SKKRKHSES-PPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLP 311
S KHS S PP + N T LP+H ++AP+ + + PL P PG
Sbjct: 167 STGMKHSSSAPPPPPPGRRANA-------PPTPLPMHSSKAPA--YNREKPLPPTPGQR- 216
Query: 312 LSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNKWATLYDANYKE 371
L R + PP PP P P + SG L P + P N ++ + + E
Sbjct: 217 LHPGR-EGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPE 275
Query: 372 LP 373
LP
Sbjct: 276 LP 277
Score = 32.3 bits (72), Expect = 2.7
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
Query: 178 PPPPPAHLPGPPPPPPPPPH-----YPVLQRD 204
PPPPP P P PPPPP H P L RD
Sbjct: 4 PPPPP---PPPGPPPPPTFHQANTEQPKLSRD 32
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 57.8 bits (138), Expect = 6e-08
Identities = 57/182 (31%), Positives = 70/182 (38%), Gaps = 33/182 (18%)
Query: 27 NIDTSILEEYISKEDASDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGP-SPG 85
N++T L + S E+ S D+ SSA + P + G S P G P +P
Sbjct: 1373 NLET--LPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDT---STPDGPPLAPA 1427
Query: 86 RHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSE 145
P PPP G P + N+N GT P E K P P P P
Sbjct: 1428 AAVPGPPPLPGLP-SANSN------------GTPEPPLLEEKPPPTPPPAPTPQPQPPPP 1474
Query: 146 AYSPQQ-VNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPP-------PPH 197
PQ + P L TP + P PPPPP +P PPPPPPP PP
Sbjct: 1475 PPPPQPALPSPPPLVAPTPSS------PPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Query: 198 YP 199
P
Sbjct: 1529 EP 1530
Score = 57.0 bits (136), Expect = 1e-07
Identities = 83/299 (27%), Positives = 106/299 (35%), Gaps = 54/299 (18%)
Query: 48 PDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLP---PPGYGTPLNCNNN 104
P + P+ + + + G+ P ++G GGG G G P PGY T
Sbjct: 346 PSKAGPSGATAGASGRATGPEAAG-------GGGAGGGGGGYRPIIQSPGYKTGKGGYGA 398
Query: 105 NGMGAAPKPFPGGTGPPIKAE----PKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRT 160
GA P P T P K + P A YA G + +G +AYSP Q P L
Sbjct: 399 AAGGATRPPPPRSTATP-KCQSLGGPAAAYATGKASGAG-GAGGQAYSPGQ---PQGL-- 451
Query: 161 ITPETLCHVGVPSRLEHPPPPPAHLPGPPPPP--PPPPHYPV--------LQRDLYMKAE 210
+ P+ + + P++ GPP PP PPPP LQ LY
Sbjct: 452 LGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQG 511
Query: 211 PPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQM 270
P P AA QGL PT S L HG PS E+ PS +
Sbjct: 512 EPYPGPAAHSQGL-PTASPSLSYSTGHSPALSGHGGGWG--PSSLGGGGEASPSHI---- 564
Query: 271 LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS 329
+ P ++P P G SPG LS P PPGA S
Sbjct: 565 ----------------IRPLQSPPATGRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGS 607
Score = 53.1 bits (126), Expect = 1e-06
Identities = 46/157 (29%), Positives = 57/157 (36%), Gaps = 31/157 (19%)
Query: 43 SDLCFPDISAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCN 102
+ +CFPD S+ M G G G+ GP P G P
Sbjct: 930 TSICFPDSLLQDEERSFFPTMEEMFGG---------GAADDYGKAGP--PEDEGDPK--- 975
Query: 103 NNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTIT 162
GA P P GPP +P PY PG + P++ P + P L T+
Sbjct: 976 ----AGAGPPP-----GPPAY-DPYGPYCPGRASGAGPETPGLGLDPNK--PPELPSTVN 1023
Query: 163 PETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYP 199
E L + PPPPP PPPPPP P P
Sbjct: 1024 AEPLGLIQSGPHQAAPPPPP-----PPPPPPAPASEP 1055
Score = 49.7 bits (117), Expect = 2e-05
Identities = 34/93 (36%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 109 AAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCH 168
A PK GPP+ AP A +P PP G + + EP LL P
Sbjct: 1411 AGPKDTSTPDGPPL-----APAA--AVPGPPPLPGLPSANSNGTPEPPLLEEKPP----- 1458
Query: 169 VGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVL 201
P PPPA P P PPPPPPP P L
Sbjct: 1459 ---------PTPPPAPTPQPQPPPPPPPPQPAL 1482
Score = 41.2 bits (95), Expect = 0.006
Identities = 76/293 (25%), Positives = 95/293 (32%), Gaps = 82/293 (27%)
Query: 60 SHGQPAMPGSS--GVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCN---NNNGM-GAAPKP 113
SH P +S GVH L P +P P PPP PL ++G+ AAP P
Sbjct: 807 SHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSP 866
Query: 114 F---------PGGTGPPIKAEPKAPYAPGTLPDSPPDSGSE----AY---SPQQVNEPHL 157
PG + A P APG PP+S + AY SPQ P
Sbjct: 867 RLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRF 926
Query: 158 L----------------RTITPETLCHVGVPSRLEHPPPPPAHLPGPPP----PPPPPPH 197
+ R+ P G + ++ P G P PPP PP
Sbjct: 927 VPLTSICFPDSLLQDEERSFFPTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGPPPGPPA 986
Query: 198 YPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRK 257
Y +P P+ G G E P K
Sbjct: 987 Y-----------DPYGPYCPGRASGA---------------------GPETPGLGLDPNK 1014
Query: 258 HSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSL 310
E PST+NA+ L G+I+ P P P PP PP P S G L
Sbjct: 1015 PPEL-PSTVNAEPL-GLIQSGPHQAAPPP------PPPPPPPPAPASEPKGGL 1059
Score = 40.8 bits (94), Expect = 0.007
Identities = 57/246 (23%), Positives = 75/246 (30%), Gaps = 47/246 (19%)
Query: 89 PLPPP----GYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGS 144
P PPP G G L + G+G G P + + + TLP D
Sbjct: 1333 PHPPPSGAFGLGGALEAAESEGLGL------GCPSPCKRLDEELKRNLETLPSFSSDEED 1386
Query: 145 EAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRD 204
+ + E + S + PP P P PP P
Sbjct: 1387 SVAKNRDLQE---------------SISSAISALDDPPLAGPKDTSTPDGPPLAPAAA-- 1429
Query: 205 LYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPS 264
+ PP+P GL + + T + +L + PT P + PP
Sbjct: 1430 --VPGPPPLP-------GLPSANSNGTPEPPLLEE------KPPPTPPPAPTPQPQPPPP 1474
Query: 265 TLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHP 324
Q + P V P P P PP PP P P P P A P
Sbjct: 1475 PPPPQPA---LPSPPPLVAPTPSSPPPPPLPPPPP--PAMPSPPPPPPPAAAPLAAPPEE 1529
Query: 325 PGAPSP 330
P APSP
Sbjct: 1530 PAAPSP 1535
Score = 40.0 bits (92), Expect = 0.013
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 112 KPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGV 171
+PFP + ++ P +P A G L SP D P Q P + ++ E L GV
Sbjct: 160 RPFPVPSSLSLQDPPFSPPANGLL--SPHDVLH--LKPSQA--PTVPSSLGFERLAGGGV 213
Query: 172 --PSRLEHPPPPPAHLPGPPPPPPPPPHYP 199
P+ L P P + PGPP PPPPP H P
Sbjct: 214 LGPAGLG-PAQTPPYRPGPPDPPPPPRHLP 242
Score = 38.9 bits (89), Expect = 0.028
Identities = 40/133 (30%), Positives = 48/133 (36%), Gaps = 31/133 (23%)
Query: 113 PFPGGTGPPIKAEPKAPYAPGT------LPDSPPDSGSEAYSPQQVNEPHLLRTITPETL 166
P GG P A Y G L SPP A S Q LL P+
Sbjct: 732 PERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLEAGGPDLP 791
Query: 167 CHVG------VPSRLEHPPPPP-------AHL---------PGPPPPPPPPPHYPVLQRD 204
+ +PS L H P P HL P PPPPPPPPP LQ +
Sbjct: 792 LVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPPMPLQLE 851
Query: 205 LYMKA---EPPIP 214
++++ EP P
Sbjct: 852 AHLRSHGLEPAAP 864
Score = 37.4 bits (85), Expect = 0.083
Identities = 48/182 (26%), Positives = 58/182 (31%), Gaps = 53/182 (29%)
Query: 53 PASSASYSHGQPAMPGS------SGVHHLSPPGGGPSPGRHGP-----LPPPGYGTPLNC 101
P+SSA ++ PA GS S + PP P+ G P L P T +
Sbjct: 143 PSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSS 202
Query: 102 NNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPD------------SGSEAYSP 149
+ P G GP PY PG PD PP S S A +
Sbjct: 203 LGFERLAGGGVLGPAGLGPA----QTPPYRPGP-PDPPPPPRHLPTQFNLLASSSAAAAA 257
Query: 150 QQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLP--------------GPPPPPPPP 195
+ + P L PPPP LP PPPPPPP
Sbjct: 258 AEQSSPQLYN-----------FSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPP 306
Query: 196 PH 197
H
Sbjct: 307 AH 308
Score = 35.8 bits (81), Expect = 0.24
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 280 GTVTALPLHPTRAPSPPWPPQGPLSPG--------PGSLPLSIARVQTPPWHPPGAPSPG 331
G L P+ + PP PP GP PG P L + VQ P+ P A S G
Sbjct: 464 GQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQG 523
Query: 332 LLQDSDSLSGS 342
L S SLS S
Sbjct: 524 LPTASPSLSYS 534
Score = 34.3 bits (77), Expect = 0.70
Identities = 49/177 (27%), Positives = 64/177 (36%), Gaps = 32/177 (18%)
Query: 181 PPAHLPG--PP--PPPPPPPHYPVLQRDLYMKAEPPIPH-------------YAAMGQGL 223
PP + G PP PP PP P A P +PH AA +GL
Sbjct: 1296 PPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGL 1355
Query: 224 VPTDLHHTQQSQMLHQLLQQHGAELPTHPS-------KKRKHSESPPSTLNA---QMLNG 273
L + L + L+++ LP+ S K R ES S ++A L G
Sbjct: 1356 ---GLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAG 1412
Query: 274 MIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSP 330
++ T PL P A P P G S P + PP PP AP+P
Sbjct: 1413 --PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTP 1467
Score = 33.1 bits (74), Expect = 1.6
Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 12/117 (10%)
Query: 79 GGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDS 138
GG +P P PPP TP + KP P T EP AP P L
Sbjct: 1687 GGSSAPPPKAPAPPPKPETPEKTTSE-------KP-PEQTPETAMPEPPAPEKPSLLRPV 1738
Query: 139 PPDSGSEAYS----PQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPP 191
+ E + P + R PE G P+ P P + PPP
Sbjct: 1739 EKEKEKEKVTRGERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEPPP 1795
Score = 32.0 bits (71), Expect = 3.5
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 19/82 (23%)
Query: 63 QPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGPPI 122
QPA+P + ++P P P P PPP +P P P P+
Sbjct: 1479 QPALPSPPPL--VAPTPSSPPPPPLPPPPPPAM-------------PSPPPPPPPAAAPL 1523
Query: 123 KAEPKAPYAPG----TLPDSPP 140
A P+ P AP LPD+ P
Sbjct: 1524 AAPPEEPAAPSPEDPELPDTRP 1545
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 57.4 bits (137), Expect = 8e-08
Identities = 85/298 (28%), Positives = 104/298 (34%), Gaps = 57/298 (19%)
Query: 53 PASSA--SYSHGQPAMPGSSGVHHLSPPGGGPS-PGR----HGPLPPPGYGTPLNCNNNN 105
PAS A SY H P P S V + P PS P + GP PPP YG L +N
Sbjct: 400 PASQALPSYPHSFPP-PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSN-- 456
Query: 106 GMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPET 165
A P PFP TG A P + QQ + H P
Sbjct: 457 ---AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPG 513
Query: 166 LCHVGVPSRLEHPPPPPAHLPG-----PPPPPP---PPPHYPVLQRDLYMKAEPPIPHYA 217
+ H P A P P PP P PPPH V Y +A P P +
Sbjct: 514 AFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVS----YSQAGPNGPPVS 569
Query: 218 AMG-------QGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQM 270
+ QG P H SQ GA P P P T ++
Sbjct: 570 SSSNSSSSTSQGSYPCS--HPSPSQ------GPQGAPYPFPPV--------PTVTTSSAT 613
Query: 271 LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAP 328
L+ +I TV + P A P PP G +P PG+ + TPP + PG+P
Sbjct: 614 LSTVI----ATVASSPAGYKTASPPGPPPYGKRAPSPGAY-----KTATPPGYKPGSP 662
Score = 56.2 bits (134), Expect = 2e-07
Identities = 84/314 (26%), Positives = 106/314 (33%), Gaps = 38/314 (12%)
Query: 51 SAPASSASYSHGQPAMPGSSGVHHL-----SPPGGGPSPGRHGPLPPPGY------GTPL 99
SAP A++ H P +P + L SPPG G P G LP P G P
Sbjct: 287 SAPPP-ANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-LPGHLPSPHAMGQGMGGLPP 344
Query: 100 NCNNNNGMGAAPKPFPGGTG----PPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNE- 154
+ +P P + PP++ + + S S S + SP ++
Sbjct: 345 GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQA 404
Query: 155 -PHLLRTITPETLCHVG-VPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPP 212
P + P T V P + P P + PPPPPP Y L + P
Sbjct: 405 LPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPP--YGRLLANSNAHPGPF 462
Query: 213 IPHYAAMGQGLVP--TDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQM 270
P A P T HH QQ Q Q QQ + H +S PP
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH----HGNSGPPPPGAFPHP 518
Query: 271 LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSP 330
L G HP A SP P PGP LP ++V P G P
Sbjct: 519 LEGGSSHH--------AHP-YAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVS 569
Query: 331 GLLQDSDSLS-GSY 343
S S S GSY
Sbjct: 570 SSSNSSSSTSQGSY 583
Score = 52.8 bits (125), Expect = 2e-06
Identities = 75/294 (25%), Positives = 104/294 (35%), Gaps = 59/294 (20%)
Query: 65 AMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFP-------GG 117
A PG+ H PGG P+ P G G + NG P P G
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
+G P P P G LP +PP + +P + P LR + + G+ ++
Sbjct: 268 SGAPPTKPPTTPVGGGNLPSAPPPANFPHVTP-NLPPPPALRPLNNASASPPGLGAQ--- 323
Query: 178 PPPPPAHLPGP----------PPPP------PPPPHYPVLQRDLYMKAEPPI--PHYAAM 219
P P HLP P PP P P PH L PP+ P+ ++
Sbjct: 324 --PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPH--SLPPASSSAPAPPMRFPYSSSS 379
Query: 220 GQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEP 279
+ + S Q LP++P HS PP++L+ + +P
Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQ---ALPSYP-----HSFPPPTSLS-------VSNQP 424
Query: 280 GTVTALPLHPTRA----PSPPWPPQGPL----SPGPGSLPLSIARVQTPPWHPP 325
T P P++A PP PP G L + PG P S T HPP
Sbjct: 425 PKYTQ-PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTA--HPP 475
Score = 50.1 bits (118), Expect = 1e-05
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 33/164 (20%)
Query: 47 FPDISAPASSASYSHGQPAMPGSS--GVHHLSPPGG------GPSPGRHGPLPPPGY--G 96
FP + +S++ A SS G SPPG PSPG + PPGY G
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG 660
Query: 97 TPLNCNNNNGMGAAPKPFPGGTG------PPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQ 150
+P + G P G G P + P P P LP PP + A P
Sbjct: 661 SPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPP 720
Query: 151 ----QVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPP 190
Q+ + TPE+ P PPA P PPP
Sbjct: 721 LSATQIKQEPAEEYETPES-------------PVPPARSPSPPP 751
Score = 45.1 bits (105), Expect = 4e-04
Identities = 65/275 (23%), Positives = 93/275 (33%), Gaps = 60/275 (21%)
Query: 51 SAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPP-PGY-------------- 95
S P ++ H P GSS HH P PS G P PP P +
Sbjct: 507 SGPPPPGAFPH--PLEGGSS--HHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG 562
Query: 96 --GTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQV- 152
G P++ ++N+ + +P P + APY +P S + + V
Sbjct: 563 PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVA 622
Query: 153 NEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPP--PPPPPPHYPVLQRDLYMKAE 210
+ P +T +P G P + P P A+ PP P PP + Y
Sbjct: 623 SSPAGYKTASPP-----GPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTS 677
Query: 211 PPI------PHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPS 264
PP P +G G +P + LP+ P + PP
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPP----------------AGPSGLPSLPPPPAAPASGPPL 721
Query: 265 TLNAQMLNGMIKQEPGT---VTALPLHPTRAPSPP 296
+ IKQEP P+ P R+PSPP
Sbjct: 722 SAT------QIKQEPAEEYETPESPVPPARSPSPP 750
Score = 40.0 bits (92), Expect = 0.013
Identities = 73/279 (26%), Positives = 89/279 (31%), Gaps = 71/279 (25%)
Query: 126 PKAPYAPGTL-PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAH 184
P PY P L P SP S P+ EPH T P+ P PP
Sbjct: 155 PARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVT-----------PTGYHAPMEPPTS 203
Query: 185 LPGPPPPPPPPPH---YP-----VLQ--------------------RDLYMKAEPPIPHY 216
PP PPPH YP VL + PI
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVS 263
Query: 217 AAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESP--PSTLNAQMLNGM 274
++ G PT T G LP+ P +P P + LN
Sbjct: 264 SSGASGAPPTKPPTTPVG----------GGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 275 IKQEPGTVTALPLHPTRAPS-----------PPWPPQGP-LSPGPGSLPLSIARVQTPPW 322
PG + A PL P PS PP P +GP L+P P SLP + + PP
Sbjct: 314 SASPPG-LGAQPL-PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPM 371
Query: 323 HPP---GAPSPGLLQDSDSLSGSYLD--PNYQSIKWQPH 356
P + S S S S S P Q++ PH
Sbjct: 372 RFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPH 410
Score = 31.2 bits (69), Expect = 5.9
Identities = 45/181 (24%), Positives = 61/181 (33%), Gaps = 24/181 (13%)
Query: 173 SRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQ 232
S L P P H P PP P PP Q + + P + PT H
Sbjct: 149 SGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSV----------TPTGYHAPM 198
Query: 233 QSQMLHQLLQQHGAELP---THPSKKRKHSESPP-------STLNAQMLNGMIKQEPGTV 282
+ GA P +P PP + + NG KQ P
Sbjct: 199 EPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGG-KQHPPPT 257
Query: 283 TALPLHPTRAPSPPWPPQGPLSP-GPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSG 341
T + + + A P P + P +P G G+LP S P P P P L+ ++ S
Sbjct: 258 TPISVSSSGASGAP-PTKPPTTPVGGGNLP-SAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 342 S 342
S
Sbjct: 316 S 316
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 57.4 bits (137), Expect = 8e-08
Identities = 85/298 (28%), Positives = 104/298 (34%), Gaps = 57/298 (19%)
Query: 53 PASSA--SYSHGQPAMPGSSGVHHLSPPGGGPS-PGR----HGPLPPPGYGTPLNCNNNN 105
PAS A SY H P P S V + P PS P + GP PPP YG L +N
Sbjct: 400 PASQALPSYPHSFPP-PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSN-- 456
Query: 106 GMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPET 165
A P PFP TG A P + QQ + H P
Sbjct: 457 ---AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPG 513
Query: 166 LCHVGVPSRLEHPPPPPAHLPG-----PPPPPP---PPPHYPVLQRDLYMKAEPPIPHYA 217
+ H P A P P PP P PPPH V Y +A P P +
Sbjct: 514 AFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVS----YSQAGPNGPPVS 569
Query: 218 AMG-------QGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQM 270
+ QG P H SQ GA P P P T ++
Sbjct: 570 SSSNSSSSTSQGSYPCS--HPSPSQ------GPQGAPYPFPPV--------PTVTTSSAT 613
Query: 271 LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAP 328
L+ +I TV + P A P PP G +P PG+ + TPP + PG+P
Sbjct: 614 LSTVI----ATVASSPAGYKTASPPGPPPYGKRAPSPGAY-----KTATPPGYKPGSP 662
Score = 56.2 bits (134), Expect = 2e-07
Identities = 84/314 (26%), Positives = 106/314 (33%), Gaps = 38/314 (12%)
Query: 51 SAPASSASYSHGQPAMPGSSGVHHL-----SPPGGGPSPGRHGPLPPPGY------GTPL 99
SAP A++ H P +P + L SPPG G P G LP P G P
Sbjct: 287 SAPPP-ANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-LPGHLPSPHAMGQGMGGLPP 344
Query: 100 NCNNNNGMGAAPKPFPGGTG----PPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNE- 154
+ +P P + PP++ + + S S S + SP ++
Sbjct: 345 GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQA 404
Query: 155 -PHLLRTITPETLCHVG-VPSRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPP 212
P + P T V P + P P + PPPPPP Y L + P
Sbjct: 405 LPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPP--YGRLLANSNAHPGPF 462
Query: 213 IPHYAAMGQGLVP--TDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQM 270
P A P T HH QQ Q Q QQ + H +S PP
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH----HGNSGPPPPGAFPHP 518
Query: 271 LNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPGSLPLSIARVQTPPWHPPGAPSP 330
L G HP A SP P PGP LP ++V P G P
Sbjct: 519 LEGGSSHH--------AHP-YAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVS 569
Query: 331 GLLQDSDSLS-GSY 343
S S S GSY
Sbjct: 570 SSSNSSSSTSQGSY 583
Score = 52.8 bits (125), Expect = 2e-06
Identities = 75/294 (25%), Positives = 104/294 (35%), Gaps = 59/294 (20%)
Query: 65 AMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFP-------GG 117
A PG+ H PGG P+ P G G + NG P P G
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 118 TGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEH 177
+G P P P G LP +PP + +P + P LR + + G+ ++
Sbjct: 268 SGAPPTKPPTTPVGGGNLPSAPPPANFPHVTP-NLPPPPALRPLNNASASPPGLGAQ--- 323
Query: 178 PPPPPAHLPGP----------PPPP------PPPPHYPVLQRDLYMKAEPPI--PHYAAM 219
P P HLP P PP P P PH L PP+ P+ ++
Sbjct: 324 --PLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPH--SLPPASSSAPAPPMRFPYSSSS 379
Query: 220 GQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEP 279
+ + S Q LP++P HS PP++L+ + +P
Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQ---ALPSYP-----HSFPPPTSLS-------VSNQP 424
Query: 280 GTVTALPLHPTRA----PSPPWPPQGPL----SPGPGSLPLSIARVQTPPWHPP 325
T P P++A PP PP G L + PG P S T HPP
Sbjct: 425 PKYTQ-PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTA--HPP 475
Score = 50.1 bits (118), Expect = 1e-05
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 33/164 (20%)
Query: 47 FPDISAPASSASYSHGQPAMPGSS--GVHHLSPPGG------GPSPGRHGPLPPPGY--G 96
FP + +S++ A SS G SPPG PSPG + PPGY G
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG 660
Query: 97 TPLNCNNNNGMGAAPKPFPGGTG------PPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQ 150
+P + G P G G P + P P P LP PP + A P
Sbjct: 661 SPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPP 720
Query: 151 ----QVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPP 190
Q+ + TPE+ P PPA P PPP
Sbjct: 721 LSATQIKQEPAEEYETPES-------------PVPPARSPSPPP 751
Score = 45.1 bits (105), Expect = 4e-04
Identities = 65/275 (23%), Positives = 93/275 (33%), Gaps = 60/275 (21%)
Query: 51 SAPASSASYSHGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPP-PGY-------------- 95
S P ++ H P GSS HH P PS G P PP P +
Sbjct: 507 SGPPPPGAFPH--PLEGGSS--HHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG 562
Query: 96 --GTPLNCNNNNGMGAAPKPFPGGTGPPIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQV- 152
G P++ ++N+ + +P P + APY +P S + + V
Sbjct: 563 PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVA 622
Query: 153 NEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPP--PPPPPPHYPVLQRDLYMKAE 210
+ P +T +P G P + P P A+ PP P PP + Y
Sbjct: 623 SSPAGYKTASPP-----GPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTS 677
Query: 211 PPI------PHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESPPS 264
PP P +G G +P + LP+ P + PP
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPP----------------AGPSGLPSLPPPPAAPASGPPL 721
Query: 265 TLNAQMLNGMIKQEPGT---VTALPLHPTRAPSPP 296
+ IKQEP P+ P R+PSPP
Sbjct: 722 SAT------QIKQEPAEEYETPESPVPPARSPSPP 750
Score = 40.0 bits (92), Expect = 0.013
Identities = 73/279 (26%), Positives = 89/279 (31%), Gaps = 71/279 (25%)
Query: 126 PKAPYAPGTL-PDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAH 184
P PY P L P SP S P+ EPH T P+ P PP
Sbjct: 155 PARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVT-----------PTGYHAPMEPPTS 203
Query: 185 LPGPPPPPPPPPH---YP-----VLQ--------------------RDLYMKAEPPIPHY 216
PP PPPH YP VL + PI
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVS 263
Query: 217 AAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKRKHSESP--PSTLNAQMLNGM 274
++ G PT T G LP+ P +P P + LN
Sbjct: 264 SSGASGAPPTKPPTTPVG----------GGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 275 IKQEPGTVTALPLHPTRAPS-----------PPWPPQGP-LSPGPGSLPLSIARVQTPPW 322
PG + A PL P PS PP P +GP L+P P SLP + + PP
Sbjct: 314 SASPPG-LGAQPL-PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPM 371
Query: 323 HPP---GAPSPGLLQDSDSLSGSYLD--PNYQSIKWQPH 356
P + S S S S S P Q++ PH
Sbjct: 372 RFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPH 410
Score = 31.2 bits (69), Expect = 5.9
Identities = 45/181 (24%), Positives = 61/181 (33%), Gaps = 24/181 (13%)
Query: 173 SRLEHPPPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQ 232
S L P P H P PP P PP Q + + P + PT H
Sbjct: 149 SGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSV----------TPTGYHAPM 198
Query: 233 QSQMLHQLLQQHGAELP---THPSKKRKHSESPP-------STLNAQMLNGMIKQEPGTV 282
+ GA P +P PP + + NG KQ P
Sbjct: 199 EPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGG-KQHPPPT 257
Query: 283 TALPLHPTRAPSPPWPPQGPLSP-GPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSG 341
T + + + A P P + P +P G G+LP S P P P P L+ ++ S
Sbjct: 258 TPISVSSSGASGAP-PTKPPTTPVGGGNLP-SAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 342 S 342
S
Sbjct: 316 S 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,682,593
Number of Sequences: 37866
Number of extensions: 3880916
Number of successful extensions: 47359
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 1212
Number of HSP's that attempted gapping in prelim test: 20004
Number of HSP's gapped (non-prelim): 13850
length of query: 1151
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1038
effective length of database: 13,968,660
effective search space: 14499469080
effective search space used: 14499469080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.