Guide to the Human Genome
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Name: BBC3 Sequence: fasta or formatted (101aa) NCBI GI: 187829745
Description:

BCL2 binding component 3 isoform 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [193aa] BCL2 binding component 3 isoform 4
alt prot [261aa] BCL2 binding component 3 isoform 1
alt prot [131aa] BCL2 binding component 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9         13           4
 C cysteine            5.9          6           1
 D aspartate           5.0          5           1
 E glutamate           2.0          2           1
 F phenylalanine       2.0          2           1
 G glycine            10.9         11           2
 H histidine           2.0          2           2
 I isoleucine          1.0          1           1
 K lysine              1.0          1           1
 L leucine             6.9          7           1
 M methionine          3.0          3           1
 N asparagine          0.0          0           0
 P proline            13.9         14           3
 Q glutamine           6.9          7           1
 R arginine            5.9          6           1
 S serine              5.9          6           1
 T threonine           8.9          9           2
 V valine              5.0          5           1
 W tryptophan          1.0          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2 binding component 3 isoform 3 
BBC3                  0.668   BCL2 binding component 3 isoform 1 
BBC3                  0.275   BCL2 binding component 3 isoform 2 
KLF2                  0.041   Kruppel-like factor 
FAM48B1               0.036   hypothetical protein LOC100130302 
FAM53A                0.036   dorsal neural-tube nuclear protein 
ZNF77                 0.031   zinc finger protein 77 
AKNA                  0.031   AT-hook transcription factor 
C10orf95              0.031   hypothetical protein LOC79946 
LOC100291071          0.026   PREDICTED: hypothetical protein XP_002346951 
LOC100287198          0.026   PREDICTED: hypothetical protein XP_002342815 
LOC100287198          0.026   PREDICTED: hypothetical protein 
MAP1S                 0.026   BPY2 interacting protein 1 
LOC100294438          0.026   PREDICTED: hypothetical protein 
SLC6A5                0.026   solute carrier family 6 (neurotransmitter transporte...
LMTK3                 0.021   lemur tyrosine kinase 3 
VWCE                  0.021   von Willebrand factor C and EGF domains 
LOC100288135          0.021   PREDICTED: hypothetical protein XP_002343736 
PARD3                 0.021   partitioning-defective protein 3 homolog 
FOXE3                 0.021   forkhead box E3 
HCN4                  0.016   hyperpolarization activated cyclic nucleotide-gated p...
WAS                   0.016   Wiskott-Aldrich syndrome protein 
GNAS                  0.016   GNAS complex locus NESP55 
LOC728056             0.016   PREDICTED: similar to IQ motif and SEC7 domain-cont...
LOC728056             0.016   PREDICTED: similar to IQ motif and SEC7 domain-cont...
ZAR1                  0.016   zygote arrest 1 
C20orf151             0.016   hypothetical protein LOC140893 
LOC100134209          0.016   PREDICTED: similar to IQ motif and SEC7 domain-cont...
LOC100292443          0.016   PREDICTED: hypothetical protein 
LOC100128025          0.016   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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