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Search of human proteins with 187761373
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
(557 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 1203 0.0
gi|5453557 ariadne homolog 2 [Homo sapiens] 329 4e-90
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 196 5e-50
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 149 5e-36
gi|35493801 ring finger protein 19 [Homo sapiens] 101 2e-21
gi|35493782 ring finger protein 19 [Homo sapiens] 101 2e-21
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 99 1e-20
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 98 2e-20
gi|38045938 ring finger protein 144 [Homo sapiens] 98 2e-20
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 96 7e-20
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 96 7e-20
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 96 7e-20
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 96 7e-20
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 96 7e-20
gi|50284696 IBR domain containing 2 [Homo sapiens] 94 3e-19
gi|169790973 parkin isoform 3 [Homo sapiens] 84 3e-16
gi|169790971 parkin isoform 2 [Homo sapiens] 84 4e-16
gi|169790969 parkin isoform 1 [Homo sapiens] 84 4e-16
gi|22749145 ring finger protein 217 [Homo sapiens] 74 5e-13
gi|46370057 ring finger protein 216 isoform b [Homo sapiens] 62 1e-09
gi|46358403 ring finger protein 216 isoform a [Homo sapiens] 62 1e-09
gi|109150431 ring finger protein 31 [Homo sapiens] 62 1e-09
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 56 8e-08
gi|119220564 one cut domain, family member 2 [Homo sapiens] 55 1e-07
gi|229577180 MPN domain containing isoform 2 [Homo sapiens] 55 2e-07
gi|31542699 MPN domain containing isoform 1 [Homo sapiens] 55 2e-07
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 53 6e-07
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 52 1e-06
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 52 1e-06
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 52 1e-06
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 1203 bits (3113), Expect = 0.0
Identities = 557/557 (100%), Positives = 557/557 (100%)
Query: 1 MDSDEGYNYEFDEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDG 60
MDSDEGYNYEFDEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDG
Sbjct: 1 MDSDEGYNYEFDEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDG 60
Query: 61 LLCGETGGGGGSALGPGGGGGGGGGGGGGGPGHEQEEDYRYEVLTAEQILQHMVECIREV 120
LLCGETGGGGGSALGPGGGGGGGGGGGGGGPGHEQEEDYRYEVLTAEQILQHMVECIREV
Sbjct: 61 LLCGETGGGGGSALGPGGGGGGGGGGGGGGPGHEQEEDYRYEVLTAEQILQHMVECIREV 120
Query: 121 NEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSS 180
NEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSS
Sbjct: 121 NEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSS 180
Query: 181 AQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILV 240
AQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILV
Sbjct: 181 AQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILV 240
Query: 241 DDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCG 300
DDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCG
Sbjct: 241 DDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCG 300
Query: 301 RQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHM 360
RQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHM
Sbjct: 301 RQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHM 360
Query: 361 VCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNR 420
VCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNR
Sbjct: 361 VCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNR 420
Query: 421 YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAF 480
YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAF
Sbjct: 421 YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAF 480
Query: 481 YLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLL 540
YLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLL
Sbjct: 481 YLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLL 540
Query: 541 QHVHEGYEKDLWEYIED 557
QHVHEGYEKDLWEYIED
Sbjct: 541 QHVHEGYEKDLWEYIED 557
>gi|5453557 ariadne homolog 2 [Homo sapiens]
Length = 493
Score = 329 bits (844), Expect = 4e-90
Identities = 178/537 (33%), Positives = 294/537 (54%), Gaps = 58/537 (10%)
Query: 12 DEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLLCGETGGGGG 71
D +EE + D EEEE+E++D+P G++E G+ E+ G
Sbjct: 11 DSNEE--DYDPNCEEEEEEEEDDP-------GDIEDYYVGVASDVEQQG----------A 51
Query: 72 SALGPGGGGGGGGGGGGGGPGHEQEEDYRYEVLTAEQILQHMVECIREVNEVIQNPATIT 131
A P E+Y++ LT ++ + E + + V++ ++
Sbjct: 52 DAFDP--------------------EEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVA 91
Query: 132 RILLSHFNWDKEKLMERYFDGNLEKLFAECHVI-NPSKKSRTRQMNTRSSAQDMPCQICY 190
+++L +F+W ++++RY N +L E V NPSK T S C +C
Sbjct: 92 KLILVNFHWQVSEILDRY-KSNSAQLLVEARVQPNPSKHVPT-------SHPPHHCAVCM 143
Query: 191 LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLIT 250
L C H+FC CW ++ + ++++G+G +SC A C + ++ V L+
Sbjct: 144 QFVRKENLLSLACQHQFCRSCWEQHCSV-LVKDGVGVGVSCMAQDCPLRTPEDFVFPLLP 202
Query: 251 DSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRC-KCGRQFCFNCGE 309
+ +++ KY+ + +VE + L+ CP DC V++VQ P A+ V+C +C FCF C +
Sbjct: 203 NEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQ 262
Query: 310 NWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKA 369
+H P C ++KW+ KC DDSET+N+I+A+TK+CPKC++ IEK+GGCNHM C CK
Sbjct: 263 MYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKCNICIEKNGGCNHMQC--SKCKH 320
Query: 370 EFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLR 429
+FCW+CLG W+ HGS +Y C+RY E+ + Q ++R AL++YLFY R+ NH +SL+
Sbjct: 321 DFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQ 380
Query: 430 FEHKLYAQVKQKMEEMQQHNM-SWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQS 488
E + Y ++ +K++E +N+ +WI+ Q+L+ A +L +CR TL YTY +A+Y++ +
Sbjct: 381 LEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRK 440
Query: 489 IIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHE 545
+FE QA LE E LS +ER S D + ++++ E RRR LL+ H+
Sbjct: 441 KLFEYQQAQLEAEIENLSWKVERADSYD-----RGDLENQMHIAEQRRRTLLKDFHD 492
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 196 bits (498), Expect = 5e-50
Identities = 145/518 (27%), Positives = 225/518 (43%), Gaps = 83/518 (16%)
Query: 101 YEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAE 160
YE L + + + I E +++Q P LL +WD+EKL+E + N E
Sbjct: 225 YEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMS-NPENCCQR 283
Query: 161 CHVINPSKK-----------SRTRQMNTRSSAQDMP-------------CQICYLNYPNS 196
V P+ S TRSS C IC + S
Sbjct: 284 SGVQMPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSI--S 341
Query: 197 YF---TGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 253
F + CGH FC CW +L KI +EG I CPA+ C LV + + +++
Sbjct: 342 VFEDPVDMPCGHDFCRGCWESFLNLKI-QEGEAHNIFCPAYDCFQLVPVDIIESVVSKEM 400
Query: 254 VKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV-------------QYP--DAKPVRCK 298
K +Y +FVE N +KWCP P C V++ +P A V C
Sbjct: 401 DK-RYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCG 459
Query: 299 CGRQFCFNCGENWHDPVKCKWLKKWIKKCDD--------------DSETSNWIAANTKEC 344
G FC+ C H+P C+ K W++K + D+ W+ N+K C
Sbjct: 460 KGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPC 519
Query: 345 PKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSA---WYNCNRY------NED 395
C I+K+ GCNHM C CK +FCW+CL W+ H S+ +Y C RY E
Sbjct: 520 ANCKSPIQKNEGCNHMQC--AKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQ 577
Query: 396 DAKAARDAQERSR--AALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEE----MQQHN 449
+ +A+++ + L R++ Y R+ NH S + E +L K+KME+ +++
Sbjct: 578 SKEMTVEAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETE 637
Query: 450 MSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLK-KNNQSIIFENNQADLENATEVLSGY 508
+ F++ AV VL + R L +Y + F+L+ K+ + IFE Q DLE TE L+
Sbjct: 638 GGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLA-- 695
Query: 509 LERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEG 546
+ +++ L+ + K+ + +R+ L V G
Sbjct: 696 --QKVNRPYLRTPRHKIIKAACLVQQKRQEFLASVARG 731
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 149 bits (377), Expect = 5e-36
Identities = 117/453 (25%), Positives = 190/453 (41%), Gaps = 43/453 (9%)
Query: 104 LTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHV 163
++ +++ M + +R+V E + + + LL+H +W E+L++ Y + L A
Sbjct: 1997 MSPQEVEGLMKQTVRQVQETLNLEPDVAQHLLAHSHWGAEQLLQSYSEDPEPLLLAAGLC 2056
Query: 164 INPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEE 223
++ ++ R + + C + L C H C CW+EYLTT+I E+
Sbjct: 2057 VHQAQAVPVRPDHCPVCVSPLGC--------DDDLPSLCCMHYCCKSCWNEYLTTRI-EQ 2107
Query: 224 GMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPD-CH 282
+ +CP C + +++ +V KY+ + +VE L WC P C
Sbjct: 2108 NLVLNCTCPIADCPAQPTGAFIRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCD 2167
Query: 283 HVVKVQYPDAKPVRCKCGRQFCFNCG-ENWHDPVKCKWLKKWIKKCDD---------DSE 332
++ Q KCG CFNC H P C + +W+ DD +++
Sbjct: 2168 RILCRQGLGCGTTCSKCGWASCFNCSFPEAHYPASCGHMSQWV---DDGGYYDGMSVEAQ 2224
Query: 333 TSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRY 392
+ + +K CP C IEK+ GC HM C C FCW CL W+P+ +YNC+
Sbjct: 2225 SKHLAKLISKRCPSCQAPIEKNEGCLHMTCAK--CNHGFCWRCLKSWKPNHKDYYNCSAM 2282
Query: 393 NEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSW 452
+KAAR QE+ R+ Y R H Q+ F L +V E + +
Sbjct: 2283 ---VSKAAR--QEK------RFQDYNERCTFHHQAREFAVNLRNRVSAIHEVPPPRSFT- 2330
Query: 453 IEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERD 512
FL A L Q R L Y V++FY + + E +LE T L LE
Sbjct: 2331 ----FLNDACQGLEQARKVLAYACVYSFYSQDAEYMDVVEQQTENLELHTNALQILLEET 2386
Query: 513 ISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHE 545
+ + +D+ ++ C S LL+ + E
Sbjct: 2387 LLR--CRDLASSLRLLRADCLSTGMELLRRIQE 2417
Score = 30.0 bits (66), Expect = 5.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 13 EDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVE 46
E+EE +ED E ++DE D+E D+D+ E E
Sbjct: 2463 EEEEEDDEDDVPEWQQDEFDEELDNDSFSYDESE 2496
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 101 bits (251), Expect = 2e-21
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 186 CQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNT 244
C +C L + F + C H+ C+ C +YL +I E + ISCP C + +
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN--ISCPE--CTERFNPHD 187
Query: 245 VMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRCKCG 300
+ +++D + KY+ + ++ + +WCPAPDC + V P R CG
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 247
Query: 301 RQFCFNCGENWHDPVKCK----------WLKKWIKKCDDDSETSNWIAANTKECPKCHVT 350
+FC++C + WH C L+ S+ S A + K CP+C
Sbjct: 248 TEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAY 307
Query: 351 IEK--DGGCNHMVCRNQNCKAEFCWVCL 376
I K DG CNHM C C EFCW+C+
Sbjct: 308 IIKMNDGSCNHMTC--AVCGCEFCWLCM 333
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 101 bits (251), Expect = 2e-21
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 186 CQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNT 244
C +C L + F + C H+ C+ C +YL +I E + ISCP C + +
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN--ISCPE--CTERFNPHD 187
Query: 245 VMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRCKCG 300
+ +++D + KY+ + ++ + +WCPAPDC + V P R CG
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 247
Query: 301 RQFCFNCGENWHDPVKCK----------WLKKWIKKCDDDSETSNWIAANTKECPKCHVT 350
+FC++C + WH C L+ S+ S A + K CP+C
Sbjct: 248 TEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAY 307
Query: 351 IEK--DGGCNHMVCRNQNCKAEFCWVCL 376
I K DG CNHM C C EFCW+C+
Sbjct: 308 IIKMNDGSCNHMTC--AVCGCEFCWLCM 333
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 99.0 bits (245), Expect = 1e-20
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 181 AQDMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDIL 239
A+++ C +C + P L C H+ C C YL +I E + ISCP C
Sbjct: 114 AEEVECPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRV--PISCPE--CSER 169
Query: 240 VDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKC 299
++ + + L+ D + KY+ + ++ + +WCPAPDC + V + Y A + C
Sbjct: 170 LNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAV-IAYGCASCPKLTC 228
Query: 300 GR-----QFCFNCGENWHDPVKC--------KWLKKWIKKCDDDSETSNWIAANTKECPK 346
R +FC++C + WH C + L+ K S + K CP+
Sbjct: 229 EREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPDDIKPCPR 288
Query: 347 CHVTIEK--DGGCNHMVCRNQNCKAEFCWVCL 376
C I K DG CNHM C C EFCW+C+
Sbjct: 289 CSAYIIKMNDGSCNHMTC--AVCGCEFCWLCM 318
Score = 33.5 bits (75), Expect = 0.53
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 30/129 (23%)
Query: 271 RLLKWCPAPDCH----HVVKVQYPDAK-PVRCKCGRQFCFNCGE--NWHD--------PV 315
RLL CP C H ++++ +++ P+ C C E N HD P+
Sbjct: 133 RLLS-CPHRSCRDCLRHYLRLEISESRVPISCP-------ECSERLNPHDIRLLLADPPL 184
Query: 316 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDG--GCNHMVCRNQNCKAEFCW 373
K+ + +++ W A P C + G C + C + C+ EFC+
Sbjct: 185 MHKYEEFMLRRYLASDPDCRWCPA-----PDCGYAVIAYGCASCPKLTCEREGCQTEFCY 239
Query: 374 VCLGPWEPH 382
C W P+
Sbjct: 240 HCKQIWHPN 248
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 97.8 bits (242), Expect = 2e-20
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 181 AQDMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDIL 239
A+++ C +C + P L C H+ C C YL +I E + ISCP C
Sbjct: 114 AEEVECPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRV--PISCPE--CSER 169
Query: 240 VDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKC 299
++ + + L+ D + KY+ + ++ + +WCPAPDC + V + Y A + C
Sbjct: 170 LNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAV-IAYGCASCPKLTC 228
Query: 300 GR-----QFCFNCGENWHDPVKC--------KWLKKWIKKCDDDS-ETSNWIAANTKECP 345
R +FC++C + WH C + L+ K S + A + K CP
Sbjct: 229 EREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCP 288
Query: 346 KCHVTIEK--DGGCNHMVCRNQNCKAEFCWVCL 376
+C I K DG CNHM C C EFCW+C+
Sbjct: 289 RCSAYIIKMNDGSCNHMTC--AVCGCEFCWLCM 319
Score = 33.5 bits (75), Expect = 0.53
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 30/129 (23%)
Query: 271 RLLKWCPAPDCH----HVVKVQYPDAK-PVRCKCGRQFCFNCGE--NWHD--------PV 315
RLL CP C H ++++ +++ P+ C C E N HD P+
Sbjct: 133 RLLS-CPHRSCRDCLRHYLRLEISESRVPISCP-------ECSERLNPHDIRLLLADPPL 184
Query: 316 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDG--GCNHMVCRNQNCKAEFCW 373
K+ + +++ W A P C + G C + C + C+ EFC+
Sbjct: 185 MHKYEEFMLRRYLASDPDCRWCPA-----PDCGYAVIAYGCASCPKLTCEREGCQTEFCY 239
Query: 374 VCLGPWEPH 382
C W P+
Sbjct: 240 HCKQIWHPN 248
>gi|38045938 ring finger protein 144 [Homo sapiens]
Length = 292
Score = 97.8 bits (242), Expect = 2e-20
Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 172 TRQMNTRSSAQD--MPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQT 228
TR T A D + C++C YP T + +C FC C +Y+ +++EG+
Sbjct: 4 TRYRPTWDLALDPLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVEL-LIKEGLETA 62
Query: 229 ISCPAHGCDIL--VDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 286
ISCP C + +N + ++ +++ +Y+ L V + WCPA C V +
Sbjct: 63 ISCPDAACPKQGHLQENEIECMVA-AEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQ 121
Query: 287 VQ---YPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWL----------KKWIKKCDDDSE 332
+Q +PV+CK C +FC C +WH C K +DD
Sbjct: 122 LQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDD-- 179
Query: 333 TSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCL 376
A K CPKC V IE+D GC M+C+ NCK FCW CL
Sbjct: 180 ------APIKRCPKCKVYIERDEGCAQMMCK--NCKHAFCWYCL 215
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 96.3 bits (238), Expect = 7e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 220 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 276
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 277 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 335
Query: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
FC C +H CK + K+ I+K ++ E+
Sbjct: 336 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 395
Query: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 396 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 435
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 96.3 bits (238), Expect = 7e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 220 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 276
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 277 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 335
Query: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
FC C +H CK + K+ I+K ++ E+
Sbjct: 336 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 395
Query: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 396 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 435
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 96.3 bits (238), Expect = 7e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 220 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 276
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 277 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 335
Query: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
FC C +H CK + K+ I+K ++ E+
Sbjct: 336 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 395
Query: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 396 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 435
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 96.3 bits (238), Expect = 7e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 94 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 150
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 151 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 209
Query: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
FC C +H CK + K+ I+K ++ E+
Sbjct: 210 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 269
Query: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 270 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 309
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 96.3 bits (238), Expect = 7e-20
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 186 CQICYLNYPNS---YFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD 242
C IC+ S YF LEC H +C C +Y +I +G Q ++CP C +
Sbjct: 220 CSICFCEKLGSECMYF--LECRHVYCKACLKDYFEIQI-RDGQVQCLNCPEPKCPSVATP 276
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ 302
V L+ ++++ +Y L+ S ++ + +CP P C V + + C
Sbjct: 277 GQVKELV-EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFA 335
Query: 303 FCFNCGENWHDPVKCK---------------------------WLKKWIKKCDDDSETSN 335
FC C +H CK + K+ I+K ++ E+
Sbjct: 336 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 395
Query: 336 WIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 377
W+ N+K CP C IEK GCN M C C FCW+C+G
Sbjct: 396 WLEKNSKSCPCCGTPIEKLDGCNKMTC--TGCMQYFCWICMG 435
>gi|50284696 IBR domain containing 2 [Homo sapiens]
Length = 303
Score = 94.0 bits (232), Expect = 3e-19
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 186 CQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGC--DILVDD 242
C++C T L EC FC C +Y+ I EG G I+CP C + +
Sbjct: 30 CKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAI-REGCGSPITCPDMVCLNHGTLQE 88
Query: 243 NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD-AKPVRCKCGR 301
+ L+ + +L YQ L V + WCP DC V V D +PV +C
Sbjct: 89 AEIACLVPVDQFQL-YQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPS 147
Query: 302 ---QFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCN 358
+FC C + WH V C+ + + + + A K+CP C V IE++ GC
Sbjct: 148 CHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEAPIKQCPVCRVYIERNEGCA 207
Query: 359 HMVCRNQNCKAEFCWVCL 376
M+C+ NCK FCW CL
Sbjct: 208 QMMCK--NCKHTFCWYCL 223
>gi|169790973 parkin isoform 3 [Homo sapiens]
Length = 316
Score = 84.3 bits (207), Expect = 3e-16
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 39/270 (14%)
Query: 151 DGNLEKLFAECHVINPSKKSRTRQMNT-RSSAQDMPCQICY-LNYPNSYFTGLECG--HK 206
D +++ F +C S K + ++ ++++++ C C + P F +C H
Sbjct: 53 DWTVQEFFFKCGAHPTSDKETSVALHLIATNSRNITCITCTDVRSPVLVF---QCNSRHV 109
Query: 207 FCMQCWSEYLTTKIMEEG------MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQH 260
C+ C+ Y T++ + +G ++ C A + L+ + R++ + + Q+
Sbjct: 110 ICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKELHHFRILGEEQYNRYQQY 169
Query: 261 LITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK------CGRQFCFNCGENWHDP 314
++ +L CP P C + + PD + V C+ CG FC C E +H+
Sbjct: 170 GAEECVLQMGGVL--CPRPGCGAGLLPE-PDQRKVTCEGGNGLGCGFAFCRECKEAYHEG 226
Query: 315 VKCKWL-------KKWIKKCDDDSETSNWIAAN-------TKECPKCHVTIEKDGGCNHM 360
+C + + + + +E + W AA+ TK CP+CHV +EK+GGC HM
Sbjct: 227 -ECSAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHM 285
Query: 361 VCRNQNCKAEFCWVCLGPWEP--HGSAWYN 388
C C+ E+CW C W G W++
Sbjct: 286 KCPQPQCRLEWCWNCGCEWNRVCMGDHWFD 315
>gi|169790971 parkin isoform 2 [Homo sapiens]
Length = 437
Score = 83.6 bits (205), Expect = 4e-16
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 205 HKFCMQCWSEYLTTKIMEEG------MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKY 258
H C+ C+ Y T++ + +G ++ C A + L+ + R++ + +
Sbjct: 229 HVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKELHHFRILGEEQYNRYQ 288
Query: 259 QHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK------CGRQFCFNCGENWH 312
Q+ ++ +L CP P C + + PD + V C+ CG FC C E +H
Sbjct: 289 QYGAEECVLQMGGVL--CPRPGCGAGLLPE-PDQRKVTCEGGNGLGCGFAFCRECKEAYH 345
Query: 313 DPVKCKWL-------KKWIKKCDDDSETSNWIAAN-------TKECPKCHVTIEKDGGCN 358
+ +C + + + + +E + W AA+ TK CP+CHV +EK+GGC
Sbjct: 346 EG-ECSAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCM 404
Query: 359 HMVCRNQNCKAEFCWVCLGPWEP--HGSAWYN 388
HM C C+ E+CW C W G W++
Sbjct: 405 HMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFD 436
>gi|169790969 parkin isoform 1 [Homo sapiens]
Length = 465
Score = 83.6 bits (205), Expect = 4e-16
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 205 HKFCMQCWSEYLTTKIMEEG------MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKY 258
H C+ C+ Y T++ + +G ++ C A + L+ + R++ + +
Sbjct: 257 HVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKELHHFRILGEEQYNRYQ 316
Query: 259 QHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK------CGRQFCFNCGENWH 312
Q+ ++ +L CP P C + + PD + V C+ CG FC C E +H
Sbjct: 317 QYGAEECVLQMGGVL--CPRPGCGAGLLPE-PDQRKVTCEGGNGLGCGFAFCRECKEAYH 373
Query: 313 DPVKCKWL-------KKWIKKCDDDSETSNWIAAN-------TKECPKCHVTIEKDGGCN 358
+ +C + + + + +E + W AA+ TK CP+CHV +EK+GGC
Sbjct: 374 EG-ECSAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCM 432
Query: 359 HMVCRNQNCKAEFCWVCLGPWEP--HGSAWYN 388
HM C C+ E+CW C W G W++
Sbjct: 433 HMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFD 464
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 73.6 bits (179), Expect = 5e-13
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 221 MEEGMGQT-ISCPAHGCDILVDDNTVMRLIT-DSKVKLKYQHLITNSFVECNRL-LKWCP 277
M+ +GQ I CP C +++ TV+ +T + +K KY F+E R+ P
Sbjct: 1 MKVQLGQVEIKCPITECFEFLEETTVVYNLTHEDSIKYKY-------FLELGRIDSSTKP 53
Query: 278 APDCHHVVKVQYPDAKP----------VRCK-CGRQFCFNCGENWHDPVKCKWLKKWIKK 326
P C H + P ++C C +CF C WH+ V CK KK K
Sbjct: 54 CPQCKHFTTFKKKGHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKL 113
Query: 327 CDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 375
+ N ++CPKC + I++ GC+HM C C FC+ C
Sbjct: 114 LRHWASEIEHGQRNAQKCPKCKIHIQRTEGCDHMTC--SQCNTNFCYRC 160
>gi|46370057 ring finger protein 216 isoform b [Homo sapiens]
Length = 866
Score = 62.4 bits (150), Expect = 1e-09
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 38/268 (14%)
Query: 174 QMNTRSSAQD---MPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 230
QMN +D + C+ CY +P T H FC +C Y + G + +S
Sbjct: 500 QMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLE-LS 558
Query: 231 CPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYP 290
C C + + +++ + + KY V + P C +
Sbjct: 559 CMEGSCTCSFPTSELEKVLPQT-ILYKYYERKAEEEVAAAYADELVRCPSCSFPALLD-S 616
Query: 291 DAKPVRCK---CGRQFCFNCGENW--HDPVKCKWLKKWIKKCDDDSETS---NWIAANTK 342
D K C C ++ C C W H+ + C+ L + K D TS AA +
Sbjct: 617 DVKRFSCPNPHCRKETCRKCQGLWKEHNGLTCEELAE---KDDIKYRTSIEEKMTAARIR 673
Query: 343 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWV-----------CLGPWEPHGSAWYNCNR 391
+C KC + K GCN M CR C A+ C++ C P P G+ C+R
Sbjct: 674 KCHKCGTGLIKSEGCNRMSCR---CGAQMCYLCRVSINGYDHFCQHPRSP-GAPCQECSR 729
Query: 392 YN------EDDAKAARDAQERSRAALQR 413
+ EDD K + Q+ + +R
Sbjct: 730 CSLWTDPTEDDEKLIEEIQKEAEEEQKR 757
Score = 40.0 bits (92), Expect = 0.006
Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 330 DSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 389
+ E + A CP C D C N +C+ E C C G W+ H C
Sbjct: 591 EEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNG--LTC 648
Query: 390 NRYNE-DDAKAARDAQERSRAALQRYLFYC 418
E DD K +E+ AA R C
Sbjct: 649 EELAEKDDIKYRTSIEEKMTAARIRKCHKC 678
>gi|46358403 ring finger protein 216 isoform a [Homo sapiens]
Length = 923
Score = 62.4 bits (150), Expect = 1e-09
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 38/268 (14%)
Query: 174 QMNTRSSAQD---MPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 230
QMN +D + C+ CY +P T H FC +C Y + G + +S
Sbjct: 557 QMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLE-LS 615
Query: 231 CPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYP 290
C C + + +++ + + KY V + P C +
Sbjct: 616 CMEGSCTCSFPTSELEKVLPQT-ILYKYYERKAEEEVAAAYADELVRCPSCSFPALLD-S 673
Query: 291 DAKPVRCK---CGRQFCFNCGENW--HDPVKCKWLKKWIKKCDDDSETS---NWIAANTK 342
D K C C ++ C C W H+ + C+ L + K D TS AA +
Sbjct: 674 DVKRFSCPNPHCRKETCRKCQGLWKEHNGLTCEELAE---KDDIKYRTSIEEKMTAARIR 730
Query: 343 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWV-----------CLGPWEPHGSAWYNCNR 391
+C KC + K GCN M CR C A+ C++ C P P G+ C+R
Sbjct: 731 KCHKCGTGLIKSEGCNRMSCR---CGAQMCYLCRVSINGYDHFCQHPRSP-GAPCQECSR 786
Query: 392 YN------EDDAKAARDAQERSRAALQR 413
+ EDD K + Q+ + +R
Sbjct: 787 CSLWTDPTEDDEKLIEEIQKEAEEEQKR 814
Score = 40.0 bits (92), Expect = 0.006
Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 330 DSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 389
+ E + A CP C D C N +C+ E C C G W+ H C
Sbjct: 648 EEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEHNG--LTC 705
Query: 390 NRYNE-DDAKAARDAQERSRAALQRYLFYC 418
E DD K +E+ AA R C
Sbjct: 706 EELAEKDDIKYRTSIEEKMTAARIRKCHKC 735
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 62.0 bits (149), Expect = 1e-09
Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 32/257 (12%)
Query: 163 VINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIM 221
V+ + S+ R R AQ+ C +C P++ L C C C+ ++ T +
Sbjct: 678 VVEAVRHSQDRAFLRRLLAQE--CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALK 735
Query: 222 EEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLK----------YQHLITNSFVECNR 271
E+ + + CPA G L DD ++ + ++L+ + +T + +
Sbjct: 736 EKHITDMV-CPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDP 794
Query: 272 LLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENW---HDPVKCKWLKKWIKKCD 328
WC C + + +C + FC C W H C+ + W + D
Sbjct: 795 KFLWCA--QCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMND 852
Query: 329 DDSETSN---WIAANTKECPKCHVTIE-KDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGS 384
+ + ++ N +CPKC + GGC H C C+ +FC C +
Sbjct: 853 PEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHC--TQCRHQFCSGCY-------N 903
Query: 385 AWYNCNRYNEDDAKAAR 401
A+Y N+ E + + +
Sbjct: 904 AFYAKNKCPEPNCRVKK 920
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 56.2 bits (134), Expect = 8e-08
Identities = 28/41 (68%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 53 GVGGERDGLLCGE-TGGGGGSALGPGGGGGGGGGGGGGGPG 92
G GG DG G GGGGG GPGGGGGGG GGGGGGPG
Sbjct: 139 GGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPG 179
Score = 48.9 bits (115), Expect = 1e-05
Identities = 25/41 (60%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 53 GVGGERDGLLCGETGGGGGSALGPGGGGG-GGGGGGGGGPG 92
G GG G GGGG+ GPGGGGG GGGGG GGGPG
Sbjct: 130 GAGG------AGAAAGGGGAHDGPGGGGGPGGGGGPGGGPG 164
Score = 44.3 bits (103), Expect = 3e-04
Identities = 25/44 (56%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 50 PGLGVGGERDGLLCGETGGGGGSALGPGGGGGGGGGGGGGGPGH 93
PG G G G G GGGGG GPGGGGGG GGG GG H
Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGGG--GPGGGGGGPGGGLLGGSAH 188
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 55.5 bits (132), Expect = 1e-07
Identities = 26/37 (70%), Positives = 26/37 (70%), Gaps = 6/37 (16%)
Query: 60 GLLCGETGGGGGSALGPGGGGGGGGGGGGGGPGHEQE 96
G L G GGG G GGGGGGGGGGGGGPGHEQE
Sbjct: 30 GTLHGPAGGGSG------GGGGGGGGGGGGGPGHEQE 60
>gi|229577180 MPN domain containing isoform 2 [Homo sapiens]
Length = 451
Score = 55.1 bits (131), Expect = 2e-07
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 15 EECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLLCGETGGGGGSAL 74
E S EE +ED+DE + + + P G GG R G GGGS++
Sbjct: 5 EPLSPAGGAGEEAPEEDEDEAEAEDPE-------RPNAGAGGGRSG--------GGGSSV 49
Query: 75 GPGGGGGGGGGGGGGGPG 92
GGGGGG G GG GGPG
Sbjct: 50 SGGGGGGGAGAGGCGGPG 67
>gi|31542699 MPN domain containing isoform 1 [Homo sapiens]
Length = 471
Score = 55.1 bits (131), Expect = 2e-07
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 15 EECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLLCGETGGGGGSAL 74
E S EE +ED+DE + + + P G GG R G GGGS++
Sbjct: 5 EPLSPAGGAGEEAPEEDEDEAEAEDPE-------RPNAGAGGGRSG--------GGGSSV 49
Query: 75 GPGGGGGGGGGGGGGGPG 92
GGGGGG G GG GGPG
Sbjct: 50 SGGGGGGGAGAGGCGGPG 67
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 53.1 bits (126), Expect = 6e-07
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 20 EDSGAEEEEDEDDDEPDDDTLDLGEVE-LVEPGLGVGGERDGLLCGETGGGGGSALGPGG 78
E SG E+ D+D D + L G + PG G GG + C GG+++ PGG
Sbjct: 140 ESSGGEQSPDDDSDGRCELVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVPPGG 199
Query: 79 GGGGGGG-------GGGGGPG 92
GGGGGG GGGGG G
Sbjct: 200 LGGGGGGGSSSGSSGGGGGSG 220
Score = 39.7 bits (91), Expect = 0.007
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 57 ERDGLLCGETGGGGGSALGPGGGGGGGGGGGG 88
E GLL GGGGG + G GGGGGGG G G
Sbjct: 71 EGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPG 102
Score = 36.6 bits (83), Expect = 0.062
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query: 69 GGGSALGPGGGGGGG----GGGGGGGPG 92
G G L P GGGGGG GGGGGGG G
Sbjct: 72 GAGLLLPPPGGGGGGSAGSGGGGGGGVG 99
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 35/232 (15%)
Query: 174 QMNTRS---SAQDMPCQICY-LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTI 229
Q++ RS + + C +CY + P EC H FC +C + E +
Sbjct: 225 QLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAE-----V 279
Query: 230 SCP----AHGCDILVDDNTVMRLITDSKVKLKYQHLITN--SFVECNRLLKW-CPAPDCH 282
SCP + C + + + L+T YQ + S E + C PDC
Sbjct: 280 SCPFIDNTYSCSGKLLEREIKALLTPED----YQRFLDLGISIAENRSAFSYHCKTPDCK 335
Query: 283 HVVKVQYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKKWIK-KCDDD---SETSNWI 337
+ D C C C C + H+ + CK ++ + + +D +T+ +
Sbjct: 336 GWCFFE-DDVNEFTCPVCFHVNCLLC-KAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 393
Query: 338 AANTKE-----CPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGP-WEPHG 383
++ CP+C + ++K GC+ + C C E CWV GP W P G
Sbjct: 394 KVMLQQGEAMRCPQCQIVVQKKDGCDWIRC--TVCHTEICWVTKGPRWGPGG 443
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 35/232 (15%)
Query: 174 QMNTRS---SAQDMPCQICY-LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTI 229
Q++ RS + + C +CY + P EC H FC +C + E +
Sbjct: 267 QLDQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAE-----V 321
Query: 230 SCP----AHGCDILVDDNTVMRLITDSKVKLKYQHLITN--SFVECNRLLKW-CPAPDCH 282
SCP + C + + + L+T YQ + S E + C PDC
Sbjct: 322 SCPFIDNTYSCSGKLLEREIKALLTPED----YQRFLDLGISIAENRSAFSYHCKTPDCK 377
Query: 283 HVVKVQYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKKWIK-KCDDD---SETSNWI 337
+ D C C C C + H+ + CK ++ + + +D +T+ +
Sbjct: 378 GWCFFE-DDVNEFTCPVCFHVNCLLC-KAIHEQMNCKEYQEDLALRAQNDVAARQTTEML 435
Query: 338 AANTKE-----CPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGP-WEPHG 383
++ CP+C + ++K GC+ + C C E CWV GP W P G
Sbjct: 436 KVMLQQGEAMRCPQCQIVVQKKDGCDWIRC--TVCHTEICWVTKGPRWGPGG 485
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 52.0 bits (123), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Query: 59 DGLLCGETGGGGGSALGPGGGGGGGGGGGGGGPG 92
+G L G GGGGG G GGGGGGGGGGGGG G
Sbjct: 443 EGQLYGPCGGGGGGGGGGGGGGGGGGGGGGGEAG 476
Score = 40.0 bits (92), Expect = 0.006
Identities = 19/33 (57%), Positives = 20/33 (60%)
Query: 56 GERDGLLCGETGGGGGSALGPGGGGGGGGGGGG 88
G+ G G GGGGG G GGGGGGGGG G
Sbjct: 444 GQLYGPCGGGGGGGGGGGGGGGGGGGGGGGEAG 476
Score = 38.5 bits (88), Expect = 0.016
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 64 GETGGGGGSALGPGGGGGGGGGGGGGGP 91
G GGGGG G GGGGGGGG G P
Sbjct: 453 GGGGGGGGGGGGGGGGGGGGGEAGAVAP 480
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,128,540
Number of Sequences: 37866
Number of extensions: 1379229
Number of successful extensions: 38314
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 16753
Number of HSP's gapped (non-prelim): 10353
length of query: 557
length of database: 18,247,518
effective HSP length: 107
effective length of query: 450
effective length of database: 14,195,856
effective search space: 6388135200
effective search space used: 6388135200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.