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Search of human proteins with 187608809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187608809 hypothetical protein LOC23240 isoform 2 [Homo
sapiens]
(1609 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187608809 hypothetical protein LOC23240 isoform 2 [Homo sapiens] 3295 0.0
gi|196114949 hypothetical protein LOC23240 isoform 1 [Homo sapiens] 3291 0.0
gi|150456424 RW1 protein [Homo sapiens] 254 5e-67
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 44 0.001
gi|55741677 SET domain containing 1A [Homo sapiens] 40 0.018
gi|7662018 PHD finger protein 3 [Homo sapiens] 39 0.053
gi|213385278 TNF receptor-associated factor 3 interacting protei... 37 0.12
gi|87299628 biorientation of chromosomes in cell division 1-like... 37 0.15
gi|62988361 absent in melanoma 1 [Homo sapiens] 37 0.15
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 37 0.20
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens] 37 0.20
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 37 0.20
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 37 0.20
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 37 0.20
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 37 0.20
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 37 0.20
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 37 0.20
gi|157785548 PAS domain containing 1 [Homo sapiens] 37 0.20
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 36 0.26
gi|171543895 ataxin 2 [Homo sapiens] 36 0.26
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 36 0.26
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 36 0.26
gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sap... 36 0.26
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 36 0.34
gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens] 36 0.34
gi|116256338 SEC31 homolog A isoform 1 [Homo sapiens] 36 0.34
gi|116256336 SEC31 homolog A isoform 4 [Homo sapiens] 36 0.34
gi|41349441 SEC31 homolog A isoform 2 [Homo sapiens] 36 0.34
gi|41349439 SEC31 homolog A isoform 1 [Homo sapiens] 36 0.34
gi|161702986 ezrin [Homo sapiens] 35 0.45
>gi|187608809 hypothetical protein LOC23240 isoform 2 [Homo sapiens]
Length = 1609
Score = 3295 bits (8544), Expect = 0.0
Identities = 1609/1609 (100%), Positives = 1609/1609 (100%)
Query: 1 MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL 60
MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL
Sbjct: 1 MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL 60
Query: 61 LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR 120
LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR
Sbjct: 61 LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR 120
Query: 121 DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL 180
DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL
Sbjct: 121 DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL 180
Query: 181 SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK 240
SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK
Sbjct: 181 SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK 240
Query: 241 VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS 300
VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS
Sbjct: 241 VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS 300
Query: 301 AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKATSCDSG 360
AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKATSCDSG
Sbjct: 301 AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKATSCDSG 360
Query: 361 IIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRSV 420
IIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRSV
Sbjct: 361 IIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRSV 420
Query: 421 VLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGAI 480
VLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGAI
Sbjct: 421 VLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGAI 480
Query: 481 FAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELAN 540
FAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELAN
Sbjct: 481 FAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELAN 540
Query: 541 KLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATALR 600
KLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATALR
Sbjct: 541 KLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATALR 600
Query: 601 SRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTEA 660
SRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTEA
Sbjct: 601 SRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTEA 660
Query: 661 CPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVEG 720
CPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVEG
Sbjct: 661 CPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVEG 720
Query: 721 FGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPIT 780
FGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPIT
Sbjct: 721 FGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPIT 780
Query: 781 VSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADLE 840
VSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADLE
Sbjct: 781 VSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADLE 840
Query: 841 FRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEF 900
FRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEF
Sbjct: 841 FRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEF 900
Query: 901 MKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRI 960
MKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRI
Sbjct: 901 MKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSRI 960
Query: 961 QNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKEDI 1020
QNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKEDI
Sbjct: 961 QNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKEDI 1020
Query: 1021 CTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQ 1080
CTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQ
Sbjct: 1021 CTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQ 1080
Query: 1081 TCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGN 1140
TCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGN
Sbjct: 1081 TCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGN 1140
Query: 1141 NQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
NQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE
Sbjct: 1141 NQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
Query: 1201 KREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCI 1260
KREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCI
Sbjct: 1201 KREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCI 1260
Query: 1261 QESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASRG 1320
QESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASRG
Sbjct: 1261 QESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASRG 1320
Query: 1321 SWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSLP 1380
SWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSLP
Sbjct: 1321 SWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSLP 1380
Query: 1381 QYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPVH 1440
QYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPVH
Sbjct: 1381 QYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPVH 1440
Query: 1441 NSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTWN 1500
NSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTWN
Sbjct: 1441 NSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTWN 1500
Query: 1501 TPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHSTH 1560
TPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHSTH
Sbjct: 1501 TPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHSTH 1560
Query: 1561 MENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV 1609
MENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV
Sbjct: 1561 MENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV 1609
>gi|196114949 hypothetical protein LOC23240 isoform 1 [Homo sapiens]
Length = 1610
Score = 3291 bits (8532), Expect = 0.0
Identities = 1609/1610 (99%), Positives = 1609/1610 (99%), Gaps = 1/1610 (0%)
Query: 1 MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL 60
MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL
Sbjct: 1 MAGLRRPQPGCYCRTAAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGEL 60
Query: 61 LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR 120
LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR
Sbjct: 61 LLPTQGDSEEGLEEPSQEQSFSDKLFSGKGLHFQPSVLDFGIQFLGHPVAKILHAYNPSR 120
Query: 121 DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL 180
DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL
Sbjct: 121 DSEVVVNSVFAAAGHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVL 180
Query: 181 SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK 240
SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK
Sbjct: 181 SYHVSGIGTRRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNK 240
Query: 241 VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS 300
VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS
Sbjct: 241 VCQQLKGCYLESDDVLRLQMSIMVTMENFSKEFEENTQHLLDHLSIVYVATDESETSDDS 300
Query: 301 AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKA-TSCDS 359
AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKA TSCDS
Sbjct: 301 AVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNFTKIASFTCKAATSCDS 360
Query: 360 GIIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRS 419
GIIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRS
Sbjct: 361 GIIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIETHENTSGLWSIWYRNHFDRS 420
Query: 420 VVLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGA 479
VVLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGA
Sbjct: 421 VVLNDVFLSKETKHMLKILNFTGPLFLPPGCWNIFSLKLAVKDIAINLFTNVFLTTNIGA 480
Query: 480 IFAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELA 539
IFAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELA
Sbjct: 481 IFAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELA 540
Query: 540 NKLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATAL 599
NKLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATAL
Sbjct: 541 NKLYERWKKYKNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATAL 600
Query: 600 RSRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTE 659
RSRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTE
Sbjct: 601 RSRMIKYFVVQNPSSWPVSLQLLPLSLYPKPEALVHLLHRWFGTDMQMINFTTGEFQLTE 660
Query: 660 ACPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVE 719
ACPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVE
Sbjct: 661 ACPYLGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVE 720
Query: 720 GFGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPI 779
GFGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPI
Sbjct: 721 GFGARELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPI 780
Query: 780 TVSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADL 839
TVSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADL
Sbjct: 781 TVSSLKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADL 840
Query: 840 EFRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILME 899
EFRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILME
Sbjct: 841 EFRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILME 900
Query: 900 FMKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSR 959
FMKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSR
Sbjct: 901 FMKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSR 960
Query: 960 IQNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKED 1019
IQNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKED
Sbjct: 961 IQNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKED 1020
Query: 1020 ICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGI 1079
ICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGI
Sbjct: 1021 ICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGI 1080
Query: 1080 QTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNG 1139
QTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNG
Sbjct: 1081 QTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNG 1140
Query: 1140 NNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQ 1199
NNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQ
Sbjct: 1141 NNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQ 1200
Query: 1200 EKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWC 1259
EKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWC
Sbjct: 1201 EKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWC 1260
Query: 1260 IQESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASR 1319
IQESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASR
Sbjct: 1261 IQESTREVCKADAEIASSLPAAQREAEGYYQKPEKKCVDKFCSDSSSDCGSSSGSVRASR 1320
Query: 1320 GSWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSL 1379
GSWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSL
Sbjct: 1321 GSWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMTVNSL 1380
Query: 1380 PQYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPV 1439
PQYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPV
Sbjct: 1381 PQYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPPVCVTSSLNCTLENGVPCVIQESAPV 1440
Query: 1440 HNSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTW 1499
HNSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTW
Sbjct: 1441 HNSFIDWSATCEGQFSSAYCPLELNDYNAFPEENMNYANGFPCPADVQTDFIDHNSQSTW 1500
Query: 1500 NTPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHST 1559
NTPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHST
Sbjct: 1501 NTPPNMPAAWGHASFISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCPINPTTEHST 1560
Query: 1560 HMENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV 1609
HMENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV
Sbjct: 1561 HMENQAVVCKEYYPGFNPFRAYMNLDIWTTTANRNANFPLSRDSSYCGNV 1610
>gi|150456424 RW1 protein [Homo sapiens]
Length = 1883
Score = 254 bits (649), Expect = 5e-67
Identities = 178/547 (32%), Positives = 272/547 (49%), Gaps = 47/547 (8%)
Query: 492 TKEGSLGFEVIAHCGMHYFMGKS--KAGNPNWNGSLSLDQSTWNVDSELANKLYERWKKY 549
+K ++ F+ CG H ++G P +++ + W+ D +L L++ W
Sbjct: 735 SKIANIYFDPGLQCGDHCYVGLPFLSKSEPKVQPGVAMQEDMWDADWDLHQSLFKGWTGI 794
Query: 550 KNGDVCKRNVLGTTRFAHLKKSKESESFVFFLPRLIAEPGLMLNFSATALRSRMIKYFVV 609
K + + + K + P +++ P L F T + +
Sbjct: 795 KENSGHRLSAIFEVNTDLQKNIISKITAELSWPSILSSPR-HLKFPLTNTNCSSEEEITL 853
Query: 610 QNPSSWPVSLQLLPLSLYPKPEALVH-LLHRWFGTDMQMINFTTGEFQLTEACPY----- 663
+NP+ PV +Q +PL+LY P V L+ R+ + + I+ T EFQ+ +
Sbjct: 854 ENPADVPVYVQFIPLALYSNPSVFVDKLVSRFNLSKVAKIDLRTLEFQVFRNSAHPLQSS 913
Query: 664 LGTHSEESRFGILHLHLQPLEMKRVGVVFTPADYGKVTSLILIRNNLTVIDMIGVEGFGA 723
G SR IL+L L+P E K V V FTP V+SLI++RNNLTV+D + V+G G
Sbjct: 914 TGFMEGLSRHLILNLILKPGEKKSVKVKFTPVHNRTVSSLIIVRNNLTVMDAVMVQGQGT 973
Query: 724 RELLKVGGRLPGAGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPITVSS 783
E L+V G+LPG G SLRFK+ E+ L DC LK + ++ + FKVEN G L I + +
Sbjct: 974 TENLRVAGKLPGPGSSLRFKITEALLKDCTDSLKLREPNFTLKRTFKVENTGQLQIHIET 1033
Query: 784 LKINGYNCQGYGFEVLDCHQFSLDPNTSRDISIVFTPDFTSSWVIRDLSLVTAADLEFRF 843
++I+GY+C+GYGF+V++C +F+L N SRDI I+FTPDFT+S VIR+L +T + EF F
Sbjct: 1034 IEISGYSCEGYGFKVVNCQEFTLSANASRDIIILFTPDFTASRVIRELKFITTSGSEFVF 1093
Query: 844 TLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEFMKT 903
LN +LP+H+L CA+ +P P+WE + + + +S L VI A+ +AQ I F +
Sbjct: 1094 ILNASLPYHMLATCAEALPRPNWELALYIIISGIMSALFLLVIGTAYLEAQGIWEPFRR- 1152
Query: 904 RQRQNASSSSQQNNGPMDVISPHSYK------------------SNCKNFLDTYGPSDK- 944
S + +N P DV P + + + F G S +
Sbjct: 1153 ------RLSFEASNPPFDVGRPFDLRRIVGISSEGNLNTLSCDPGHSRGFCGAGGSSSRP 1206
Query: 945 --GRGKNCLPVNTPQSRIQNAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTE 1002
G K C P P S N R+ A + + K+ S + +TS AASS S
Sbjct: 1207 SAGSHKQCGPSVHPHSSHSN---RNSADVENVRAKNSSS---TSSRTSAQAASSQSA--- 1257
Query: 1003 EKQTSPL 1009
+TSPL
Sbjct: 1258 -NKTSPL 1263
Score = 150 bits (380), Expect = 7e-36
Identities = 133/511 (26%), Positives = 237/511 (46%), Gaps = 49/511 (9%)
Query: 16 AAAVNLLLGVFQVLLPCCRPGGAQGQAIEPLPNVVELWQAEEGELLLPTQGDSEEGLEEP 75
+AA LL + V+ A+ +A +++E+ + ++G LL Q ++ GL
Sbjct: 37 SAAAGLLGALHLVMTLVVAAARAEKEAFVQSESIIEVLRFDDGGLL---QTETTLGL--- 90
Query: 76 SQEQSFSDKLFSG--KGLHFQPSVLDFGIQFLGHPVAKILHAYNPSRDSEVVVNSVFAAA 133
S Q S L+ G + + F+P +LDF Q +G P + ++ +NPS + + + S+ A
Sbjct: 91 SSYQQKSISLYRGNCRPIRFEPPMLDFHEQPVGMPKMEKVYLHNPSSEETITLVSISATT 150
Query: 134 GHFHVPPVPCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSYGVLSYHVSGIGT---- 189
HFH R I G TSF ++FL G++E++LFINTS++GV +Y V G+G
Sbjct: 151 SHFHASFFQNRKILPGGNTSFDVVFLARVVGNVENTLFINTSNHGVFTYQVFGVGVPNPY 210
Query: 190 -------RRISTEGSAKQLPNAYFLLPKVQSIQLSQMQAETTNTSLLQVQLECSLHNKVC 242
R+ S + N + P + +Q+ +M + + L ++L
Sbjct: 211 RLRPFLGARVPVNSSFSPIINIH--NPHSEPLQVVEMYSSGGD---LHLELPTGQQGGTR 265
Query: 243 QQLKGCYLESDDVLRLQMSIM-----VTMENFSKEFEENTQHLLDHLSI-------VYVA 290
+ + E+ V+R S ++T+ ++ + + +Y +
Sbjct: 266 KLWEIPPYETKGVMRASFSSREADNHTAFIRIKTNASDSTEFIILPVEVEVTTAPGIYSS 325
Query: 291 TDESE-----TSD-DSAVNMYILHSGNSLIWIQDIRHFSQRDALSLQFEPVLLPTSTTNF 344
T+ + T D +N+++L+SG + I +R Q DA+++ F+P+ L S + +
Sbjct: 326 TEMLDFGTLRTQDLPKVLNLHLLNSGTKDVPITSVRPTPQNDAITVHFKPITLKASESKY 385
Query: 345 TKIASFT-----CKATSCDSGIIEDVKKTTHTPTLKACLFSSVAQGYFRMDSSATQFHIE 399
TK+AS + K S SG I K L+ + V GY D +AT FHI
Sbjct: 386 TKVASISFDASKAKKPSQFSGKITVKAKEKSYSKLEIPYQAEVLDGYLGFDHAATLFHIR 445
Query: 400 THENTSGLWSIWYRNHFDRSVVLNDVFLSKETKHMLKILNFTGP-LFLPPGCWNIFSLKL 458
I+ N F +++++DV L +E K M K+ NF+ P L LP IF+L
Sbjct: 446 DSPADPVERPIYLTNTFSFAILIHDVLLPEEAKTMFKVHNFSKPVLILPNESGYIFTLLF 505
Query: 459 AVKDIAINLFTNVFLTTNIGAIFAIPLQIYS 489
++++ N+ L TN + F +P+++Y+
Sbjct: 506 MPSTSSMHIDNNILLITN-ASKFHLPVRVYT 535
Score = 33.1 bits (74), Expect = 2.2
Identities = 89/400 (22%), Positives = 134/400 (33%), Gaps = 56/400 (14%)
Query: 1056 EENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPE 1115
++++ T SNP +E +KE + + K ++ K++ L K++P
Sbjct: 1419 DDDSSSTTTETSNPDTEPLLKEDTEKQKGKQAMPEKHESEMSQVKQKSKKLLNIKKEIPT 1478
Query: 1116 NHLPRNSPQYHQPDLPEISRKNNGNNQQVPV--------KNEVDHCENLKKVDTKPSSEK 1167
+ P + + P L R+N + +P +N K VD +P +
Sbjct: 1479 DVKPSSLELPYTPPLESKQRRNLPSKIPLPTAMTSGSKSRNAQKTKGTSKLVDNRPPALA 1538
Query: 1168 KIHKTSRE-----DMFSEKQDIPFVEQEDPYRK--KKLQEKREGNLQNLNWSKSRTCRKN 1220
K S+E EK P P K + +LQ LN + K
Sbjct: 1539 KFLPNSQELGNTSSSEGEKDSPPPEWDSVPVHKPGSSTDSLYKLSLQTLN---ADIFLKQ 1595
Query: 1221 KKRGVAPVSRPPEQSDLKLVC----SDFERSELSSDINVRSWCIQESTREVCK-ADAEIA 1275
++ P S P + V S S SSD ++ S ++ K A
Sbjct: 1596 RQTSPTPASPSPPAAPCPFVARGSYSSIVNSSSSSDPKIKQ--PNGSKHKLTKAASLPGK 1653
Query: 1276 SSLPAAQREAEGYYQKPEKKCVDKFCSDS---SSDCGSSSGSVRA----SRGSWGSWSST 1328
+ P GY + P K S+ SS G S V + S G W S+
Sbjct: 1654 NGNPTFAAVTAGYDKSPGGNGFAKVSSNKTGFSSSLGISHAPVDSDGSDSSGLWSPVSNP 1713
Query: 1329 SSSDGDKKPMVDAQHFLPAGDSVSQNDFPSEAPISLNLSHNICNPMT------VNSLPQY 1382
SS D F G+S + E L LS + CN + NS P Y
Sbjct: 1714 SSPD-----FTPLNSFSAFGNSF---NLTGEVFSKLGLSRS-CNQASQRSWNEFNSGPSY 1764
Query: 1383 --------AEPSCPSLPAGPTGVEEDKGLYSPGDLWPTPP 1414
PS P+ PT L + LW T P
Sbjct: 1765 LWESPATDPSPSWPASSGSPTHTATSV-LGNTSGLWSTTP 1803
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 44.3 bits (103), Expect = 0.001
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 31/208 (14%)
Query: 1054 NKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSENTAEFKERELCPLKTSKKL 1113
N E + KN+ S+PSS+ KE TS++ +E E + T+K
Sbjct: 890 NSERDVTKNSKNDSHPSSD-------------KEEGEATSDSESEVSEIHIKVKPTTKSS 936
Query: 1114 PENHLP------RNSPQYHQPDLPEISRKNNGNNQQVPVKNEVDHCENLKKVDTKPSSEK 1167
LP ++S Q E S N+ NN+ P K++ ENLK+ TK EK
Sbjct: 937 TNTSLPDDNGAWKSSKQRTSTSDSEGSCSNSENNRGKPQKHKHGSKENLKREHTKKVKEK 996
Query: 1168 ------KIHKT-SREDMFSEKQDIPFVEQEDPY--RKKKLQEKREGNLQNLNWSKSRTCR 1218
K HK R+ F + + F E+E+ K+ QE +E + N +
Sbjct: 997 LKGKKDKKHKAPKRKQAFHWQPPLEFGEEEEEEIDDKQVTQESKEKKVSENNETIKDNIL 1056
Query: 1219 KNKKRGVAPVSRPPEQSDLKLVCSDFER 1246
K +K +S + D V SD ++
Sbjct: 1057 KTEKSSEEDLS---GKHDTVTVSSDLDQ 1081
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 40.0 bits (92), Expect = 0.018
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 1227 PVSRPPEQSD---------LKLVCSDFERSELSSDINVRSWCIQESTREVCKADAEIASS 1277
P ++PP++ + K D E E S + + E E + D + +
Sbjct: 937 PGTKPPKRDEERGKTQGKHRKSFALDSEGEEASQESSSEK---DEEDDEEDEEDEDREEA 993
Query: 1278 LPAAQREAEGYYQKPEKKCVDKFCS---------DSSSDCGSSSGSVRASRGSWGSWSST 1328
+ ++E E + E+ CS DS+SD SSS S +S S S SS+
Sbjct: 994 VDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSS 1053
Query: 1329 SSSDGDKKPMVDAQHFLPAG-DSVS----QNDFPSEAPISLNLSHNICNPMTVNSLPQYA 1383
SSS + + + PA S S + P+ AP+ + + + V LP+
Sbjct: 1054 SSSSSESSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAG-SPVTPLPE-- 1110
Query: 1384 EPSCPSLPAGPTGVEEDKGLYSPGDLWPTPP 1414
+ + P+ PAGPT P P PP
Sbjct: 1111 QEASPARPAGPTEESPPSAPLRP----PEPP 1137
>gi|7662018 PHD finger protein 3 [Homo sapiens]
Length = 2039
Score = 38.5 bits (88), Expect = 0.053
Identities = 55/241 (22%), Positives = 93/241 (38%), Gaps = 43/241 (17%)
Query: 1187 VEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRG------------VAPVSRPPEQ 1234
VE ++ K++LQE +E NLQ+ S S CR N +G VA +R P+
Sbjct: 1586 VESKEKTLKRQLQEDQENNLQDNQTSNSSPCRSNVGKGNIDGNVSCSENLVANTARSPQF 1645
Query: 1235 SDLKLVCSDFERSELSSDINVRSWCIQESTREVCKADAEIASSLPAAQREAEGYYQKPEK 1294
+LK + + S + +S R K LP E + +
Sbjct: 1646 INLKR--DPRQAAGRSQPVTTSESKDGDSCRNGEK------HMLPGLSHNKE--HLTEQI 1695
Query: 1295 KCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--------VDAQHFLP 1346
+K CS + C S +++ ++ S + +S KP+ ++ H
Sbjct: 1696 NVEEKLCSAEKNSCVQQSDNLKVAQNSPSVENIQTSQAEQAKPLQEDILMQNIETVHPFR 1755
Query: 1347 AGDSVSQNDF------PSEAPI-SLNLSHNICNPMTVNSL----PQYAEPSCPSLPAGPT 1395
G +V+ + F PSE P S+ + +P T + PQ +P+ L + P
Sbjct: 1756 RGSAVATSHFEVGNTCPSEFPSKSITFTSRSTSPRTSTNFSPMRPQ--QPNLQHLKSSPP 1813
Query: 1396 G 1396
G
Sbjct: 1814 G 1814
>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
isoform 2 [Homo sapiens]
Length = 625
Score = 37.4 bits (85), Expect = 0.12
Identities = 62/321 (19%), Positives = 125/321 (38%), Gaps = 57/321 (17%)
Query: 1050 KNLLNKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSENTAEFKERELCPLKT 1109
+ +L E+ +K ++ S E K +E + + +NT + + E+ T
Sbjct: 126 RRVLAGEKGEVKGRASLTSRSQELDNKN-------VREEESRVHKNTEDRGDAEIKERST 178
Query: 1110 SKKLPENHLPRNSPQYHQPDLPEISRKNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKI 1169
S+ + + + + D + K NG N+ + E K +P +E++
Sbjct: 179 SRDRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERE------RAKARARPDNERQK 232
Query: 1170 HKTSREDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVS 1229
+ +RE D RKK+ + K EG + + R +++ +G
Sbjct: 233 DRGNRE------------RDRDSERKKETERKSEGGKEK-ERLRDRDRERDRDKG----- 274
Query: 1230 RPPEQSDLKLVCSDFERSELSSDINVRSWCIQESTREVCKADAEIASSLPAAQREAEGYY 1289
+ D + V + E S D++ +E RE K + + ASS +++ ++G +
Sbjct: 275 ---KDRDRRRV----KNGEHSWDLD------REKNREHDKPEKKSASSGEMSKKLSDGTF 321
Query: 1290 QKPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPMVDAQHFLPAGD 1349
+ + + + + +S + + R+ G STS ++GD PAG
Sbjct: 322 KDSKAETETEISTRASKSLTTKTSKRRSKNSVEG--DSTSDAEGDAG---------PAGQ 370
Query: 1350 SVSQNDFPSEAPISLNLSHNI 1370
+++ P I LS NI
Sbjct: 371 --DKSEVPETPEIPNELSSNI 389
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 37.0 bits (84), Expect = 0.15
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Query: 1154 ENLKKVDTKPSSEKKIHKTSR---EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLN 1210
EN KK K+ KTS ++ S +++ V + K + ++ + N
Sbjct: 585 ENSKKKQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSESLHVVDEN 644
Query: 1211 WSKSRTCRKNKKRGVAPVSRP--PEQSDLKLVCSDFERSELSSDINVRSWCIQESTREVC 1268
++S+ R++K+R PV E++D + V ERSE+ ++ + ++ + +
Sbjct: 645 KNESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLK 704
Query: 1269 KADAEIASSLPAAQREAEGYYQKPEKK 1295
K D+E ++E + +KPE++
Sbjct: 705 KDDSETPHLKSLLKKEVKSSKEKPERE 731
Score = 33.5 bits (75), Expect = 1.7
Identities = 62/295 (21%), Positives = 117/295 (39%), Gaps = 23/295 (7%)
Query: 911 SSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCL------PVNTPQ---SRIQ 961
SS +++N + IS HS +++ K + K + K P + P SRI+
Sbjct: 2739 SSGRKDNA--EAISGHSVEADPKEVEEEERHMPKRKRKQHYLSSEDEPDDNPDVLDSRIE 2796
Query: 962 NAAKRSPATYGHSQKKHKCSVYYSKHKTSTAAASSTSTTTEEK---QTSPLGSSLPAAKE 1018
A ++ P T H K+ KTS+ S+TS EEK +S P +
Sbjct: 2797 TAQRQCPETEPHDTKEENSRDLEELPKTSSETNSTTSRVMEEKDEYSSSETTGEKPEQND 2856
Query: 1019 DICTDAMRENW-ISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKE 1077
D + E+ I ++ G + + L K+++ IV S S +
Sbjct: 2857 DDTIKSQEEDQPIIIKRKRG----RPRKYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLK 2912
Query: 1078 GIQTCMFPKETD--IKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISR 1135
+QT KET + S + + +E+ + ++ + P+ L + + PE R
Sbjct: 2913 VMQTDESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDA--ESSEPERKR 2970
Query: 1136 KNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQE 1190
+ + ++ K + E ++ + +PS T E S+ Q P ++++
Sbjct: 2971 QKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSKTQLSPSIKRK 3025
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 37.0 bits (84), Expect = 0.15
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 1041 NLQKNLTLPKNL--LNKEENTLKNTIVFSNPSSECSMKEGIQTCMFPKETDIKTSENTAE 1098
+++ NL PKNL L E N + N +++ S+ E +T P+ TDI+ NT
Sbjct: 239 HVELNLKTPKNLDSLGNEHNPFSQPVHKGNTATKISLFENKRTNSSPRHTDIRGQRNTPA 298
Query: 1099 FKE-----RELCPLKTSKKL--PENHLPRNSPQ 1124
+ +L K +K++ PE + NSPQ
Sbjct: 299 SSKTFVGRAKLNLAKKAKEMEQPEKKVMPNSPQ 331
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 36.6 bits (83), Expect = 0.20
Identities = 83/336 (24%), Positives = 118/336 (35%), Gaps = 70/336 (20%)
Query: 1162 KPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKL---------QEKREGN------- 1205
K SSE +H TS + +P + E K KL +E R G
Sbjct: 277 KSSSETSVHCTSY-------RGVPASKPEPARAKAKLSKFSIPKQGEESRSGETNSCVEE 329
Query: 1206 -LQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCIQEST 1264
++ + W + + + V P P D +LV S + D S S
Sbjct: 330 IIREMTWLPPLSAIQAPGK-VEPTKFPFPNKDSQLVSSGHNNPK-KGDAEPESPDNGTSN 387
Query: 1265 REVCKADAEIASS-----LPAAQREA------EGYYQKPEKKCVDKFCSDSSSDCGSSSG 1313
+ + D +++S AAQR A Q+P C S S SSSG
Sbjct: 388 TSMLEDDLKLSSDEEENEQQAAQRTALRALSDSAVVQQPN--CRTSVPSSKGSSSSSSSG 445
Query: 1314 SVRASRGSWGSW-------SSTSSSDGDKKPMVDAQHFLPAGDSVSQND------FPSEA 1360
S +S S S SS+S S+G K P + PA + Q D P +
Sbjct: 446 SSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKWLNKVNPHKP 505
Query: 1361 PISL-NLSH-----NICNPM-----TVNSLPQYAEPSCPSLPAGPTGVEE------DKGL 1403
PI + N SH NP+ +P +PS T EE +K
Sbjct: 506 PILIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKEEQRPRTANKAP 565
Query: 1404 YSPGDLWPTPPVCVTSSLNCTL-ENGVPCVIQESAP 1438
S G +PP V +++ VPC E+AP
Sbjct: 566 GSKGVKQKSPPAAVAVAVSAAAPPPAVPCAPAENAP 601
Score = 32.0 bits (71), Expect = 5.0
Identities = 51/228 (22%), Positives = 87/228 (38%), Gaps = 18/228 (7%)
Query: 956 PQSRIQNAAKRSPATYGHSQKKHKC-SVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLP 1014
P S IQ K P + K + S ++ K A S T TS L L
Sbjct: 339 PLSAIQAPGKVEPTKFPFPNKDSQLVSSGHNNPKKGDAEPESPDNGTSN--TSMLEDDLK 396
Query: 1015 AAKEDICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECS 1074
+ ++ + +LR S V Q N ++ + + ++ ++ S+ SS+
Sbjct: 397 LSSDEEENEQQAAQRTALRALSDSAVVQQPNCRT--SVPSSKGSSSSSSSGSSSSSSDSE 454
Query: 1075 MKEGIQTCMFPKETDIKTSENTAE----FKERELCPLKTSKKLPENHLPRNSPQYHQPDL 1130
G + ET+ +SE+ F E P ++K + L + +P H+P +
Sbjct: 455 SSSGSDS-----ETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKWLNKVNP--HKPPI 507
Query: 1131 --PEISRKNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSRED 1176
S + N PVK +V C + V EK+I T +E+
Sbjct: 508 LIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKEE 555
>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
Length = 1226
Score = 36.6 bits (83), Expect = 0.20
Identities = 83/336 (24%), Positives = 118/336 (35%), Gaps = 70/336 (20%)
Query: 1162 KPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKL---------QEKREGN------- 1205
K SSE +H TS + +P + E K KL +E R G
Sbjct: 252 KSSSETSVHCTSY-------RGVPASKPEPARAKAKLSKFSIPKQGEESRSGETNSCVEE 304
Query: 1206 -LQNLNWSKSRTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCIQEST 1264
++ + W + + + V P P D +LV S + D S S
Sbjct: 305 IIREMTWLPPLSAIQAPGK-VEPTKFPFPNKDSQLVSSGHNNPK-KGDAEPESPDNGTSN 362
Query: 1265 REVCKADAEIASS-----LPAAQREA------EGYYQKPEKKCVDKFCSDSSSDCGSSSG 1313
+ + D +++S AAQR A Q+P C S S SSSG
Sbjct: 363 TSMLEDDLKLSSDEEENEQQAAQRTALRALSDSAVVQQPN--CRTSVPSSKGSSSSSSSG 420
Query: 1314 SVRASRGSWGSW-------SSTSSSDGDKKPMVDAQHFLPAGDSVSQND------FPSEA 1360
S +S S S SS+S S+G K P + PA + Q D P +
Sbjct: 421 SSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKWLNKVNPHKP 480
Query: 1361 PISL-NLSH-----NICNPM-----TVNSLPQYAEPSCPSLPAGPTGVEE------DKGL 1403
PI + N SH NP+ +P +PS T EE +K
Sbjct: 481 PILIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKEEQRPRTANKAP 540
Query: 1404 YSPGDLWPTPPVCVTSSLNCTL-ENGVPCVIQESAP 1438
S G +PP V +++ VPC E+AP
Sbjct: 541 GSKGVKQKSPPAAVAVAVSAAAPPPAVPCAPAENAP 576
Score = 32.0 bits (71), Expect = 5.0
Identities = 51/228 (22%), Positives = 87/228 (38%), Gaps = 18/228 (7%)
Query: 956 PQSRIQNAAKRSPATYGHSQKKHKC-SVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLP 1014
P S IQ K P + K + S ++ K A S T TS L L
Sbjct: 314 PLSAIQAPGKVEPTKFPFPNKDSQLVSSGHNNPKKGDAEPESPDNGTSN--TSMLEDDLK 371
Query: 1015 AAKEDICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECS 1074
+ ++ + +LR S V Q N ++ + + ++ ++ S+ SS+
Sbjct: 372 LSSDEEENEQQAAQRTALRALSDSAVVQQPNCRT--SVPSSKGSSSSSSSGSSSSSSDSE 429
Query: 1075 MKEGIQTCMFPKETDIKTSENTAE----FKERELCPLKTSKKLPENHLPRNSPQYHQPDL 1130
G + ET+ +SE+ F E P ++K + L + +P H+P +
Sbjct: 430 SSSGSDS-----ETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKWLNKVNP--HKPPI 482
Query: 1131 --PEISRKNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSRED 1176
S + N PVK +V C + V EK+I T +E+
Sbjct: 483 LIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKEE 530
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 260 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 316
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 317 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 376
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 377 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 424
Query: 1349 DS 1350
S
Sbjct: 425 KS 426
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 337 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 393
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 394 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 453
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 454 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 501
Query: 1349 DS 1350
S
Sbjct: 502 KS 503
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 337 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 393
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 394 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 453
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 454 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 501
Query: 1349 DS 1350
S
Sbjct: 502 KS 503
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 260 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 316
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 317 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 376
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 377 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 424
Query: 1349 DS 1350
S
Sbjct: 425 KS 426
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 337 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 393
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 394 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 453
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 454 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 501
Query: 1349 DS 1350
S
Sbjct: 502 KS 503
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c [Homo
sapiens]
Length = 958
Score = 36.6 bits (83), Expect = 0.20
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 1175 EDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKKRGVAPVSRPPEQ 1234
ED S ++ E+E P K LQ K G + + S +++ ++G AP PP +
Sbjct: 337 EDSESSSEESSDSEEETPAAKALLQAKASGKTSQVG-AASAPAKESPRKGAAPA--PPGK 393
Query: 1235 SDLKLVCSDF-ERSELSSDINVRSWCIQESTREV---CKADAEIASSLPAAQREAEGYYQ 1290
+ + + +R E S + S +E+ + KA A+S PA + +G
Sbjct: 394 TGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAP 453
Query: 1291 KPEKKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPM--VDAQHFLPAG 1348
P +K G ++ V+ + S SS+ SD D++ + ++A P G
Sbjct: 454 APPRK------------TGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLG 501
Query: 1349 DS 1350
S
Sbjct: 502 KS 503
>gi|157785548 PAS domain containing 1 [Homo sapiens]
Length = 773
Score = 36.6 bits (83), Expect = 0.20
Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 58/269 (21%)
Query: 1041 NLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKE------GIQTCMFPKETDIKTSE 1094
N Q L L + L K+ NTL++ ++ SSE K+ G P D+K
Sbjct: 397 NQQNALELMMDHLQKQPNTLRHVVIPDLQSSEAVPKKQQKQHAGQVKRPLPHPKDVKC-- 454
Query: 1095 NTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGNNQQVPVKNEVDHCE 1154
C L S L +N+ + +P + NQQ V+ E E
Sbjct: 455 ---------FCGLSLSNSL------KNTGELQEPCV--------AFNQQQLVQQEQHLKE 491
Query: 1155 NLKKVDTKPSSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKS 1214
+++ + ++ K ++ EK+ + +++ KKKLQE+R K
Sbjct: 492 QQRQLREQLQQLREQRKVQKQKKMQEKKKL---QEQKMQEKKKLQEQRR--------QKK 540
Query: 1215 RTCRKNKKRGVAPVSRPPEQSDLKLVCSDFERSELSSDINVRSWCIQ---ESTREV---- 1267
+ ++ KK + + PE+ K + L ++ V + +Q ++ R+V
Sbjct: 541 KKLQERKKWQGQMLQKEPEEEQQK---QQLQEQPLKHNVIVGNERVQICLQNPRDVSVPL 597
Query: 1268 CKADAEIASSLP------AAQREAEGYYQ 1290
C + P AA+++ G+YQ
Sbjct: 598 CNHPVRFLQAQPIVPVQRAAEQQPSGFYQ 626
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 36.2 bits (82), Expect = 0.26
Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 49/309 (15%)
Query: 900 FMKTRQRQNASSSSQQNNGPMDVISPHSYKSNCKNFLDTYGPSDKGRGKNCLPVNTPQSR 959
++ + Q + + Q +NGP + PH Y +D+ K + ++
Sbjct: 339 YVASNQHEVTRHARQVHNGPKPLNCPHC----------DYKTADRSNFKKHVELHV---- 384
Query: 960 IQNAAKRSPATYGHSQKKHKCSVYY---SKHKT---STAAASSTSTTTEEKQTSPLGSSL 1013
N + + ++ K KC++ Y SKH T T S +K+ + L ++
Sbjct: 385 --NPRQFNCPVCDYAASK-KCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDNI 441
Query: 1014 PAAKEDICTDAMRENWISLRYASGINVNLQKNLTLPKNLLNKEENTLKNTIVFS-NPSSE 1072
K +I + I A N +K++ K ++KE+ N V +
Sbjct: 442 TNEKTEI-----EQTKIKGDVAGKKN---EKSVKAEKRDVSKEKKPSNNVSVIQVTTRTR 493
Query: 1073 CSMKEGIQTCMFPKETDIKTSENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPE 1132
S+ E KE D+ T N+ +F + + K H P N + +
Sbjct: 494 KSVTE-------VKEMDVHTGSNSEKFSKTKKSKRKLEVDSHSLHGPVNDEESSTKKKKK 546
Query: 1133 ISRKNNGNNQQVPVKNEVDHCENLKKVDT--KPSSEKKIHKTSREDMFSEKQDIPFVEQE 1190
+ K+ N+Q+VP + E KK +T K S++KK K S+K P Q+
Sbjct: 547 VESKSKNNSQEVPKGD--SKVEENKKQNTCMKKSTKKKTLKNKS----SKKSSKP--PQK 598
Query: 1191 DPYRKKKLQ 1199
+P K Q
Sbjct: 599 EPVEKGSAQ 607
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 36.2 bits (82), Expect = 0.26
Identities = 70/316 (22%), Positives = 113/316 (35%), Gaps = 42/316 (13%)
Query: 1118 LPRNSPQYHQPDLPEISRKNN-GNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSRED 1176
+PR SP+ H+P P R+N+ GN PV + P S
Sbjct: 680 VPRLSPKTHRPRSP---RQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPA- 735
Query: 1177 MFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSK-SRTCRKNKKRGVAPV--SRPPE 1233
S + P E +D + + Q GN +N+ ++ S + K + +G++PV +
Sbjct: 736 --SNRAVTPSSEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQ 793
Query: 1234 QSDLKLVCSDFERSELSSDINVRSWCIQESTREVCKADAEIASSLPAAQREAEGYYQKPE 1293
DLK +DF S+ ES ++ + E ++ + K E
Sbjct: 794 IDDLKKFKNDFRLQPSSTS---------ESMDQLLNKNRE-------GEKSRDLIKDKIE 837
Query: 1294 KKCVDKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPMVDAQHFLPA-----G 1348
D F +SSS+C S S + S S+T G + Q PA
Sbjct: 838 PSAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPACKQEKD 897
Query: 1349 DSVSQNDFPSEAPIS-LNLSHNICNPMTVNSLPQYAEPSCPSLPA----------GPTGV 1397
D + D + S LN + NP + + P+ P A PT V
Sbjct: 898 DKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPV 957
Query: 1398 EEDKGLYSPGDLWPTP 1413
++P ++P P
Sbjct: 958 YTQPVCFAPNMMYPVP 973
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 36.2 bits (82), Expect = 0.26
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 28/274 (10%)
Query: 982 VYYSKHKTSTAAA---SSTSTTTEEK--QTSPLGSSLPAAKEDICTDAMRENWISLRYAS 1036
++ KHK + AAA SS ++ TE + L +SLP IC+ + N + AS
Sbjct: 1480 IHLKKHKAALAAAQYKSSNASETEPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQAS 1539
Query: 1037 GINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQTC----MFPKETDIKT 1092
+ + L K L + KNT N + S+ E I+ C + +DI+
Sbjct: 1540 QTS-QPNYHTKLKKAWLTRHSEEDKNTNKMENSGN--SVSEIIKPCSVNLIASTSSDIQN 1596
Query: 1093 SENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGNNQQVPV----KN 1148
S ++ ++ + K +++ + S + D E + Q P +N
Sbjct: 1597 SVDSKIIVDKYVKDDKVNRRKAKRTYESGS-ESGDSDESESKSEQRTKRQPKPTYKKKQN 1655
Query: 1149 EVDHCENLKKVDTKPS---SEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQEKREGN 1205
++ + + D KP+ S ++ + + IP +D + KKL++ E
Sbjct: 1656 DLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSNSNTGIPRSVLKDWRKVKKLKQTGESF 1715
Query: 1206 LQN-------LNWSKSRTCRK-NKKRGVAPVSRP 1231
LQ+ N K R CR K+G P P
Sbjct: 1716 LQDDSCCEIGPNLQKCRECRLIRSKKGEEPAHSP 1749
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 36.2 bits (82), Expect = 0.26
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 28/274 (10%)
Query: 982 VYYSKHKTSTAAA---SSTSTTTEEK--QTSPLGSSLPAAKEDICTDAMRENWISLRYAS 1036
++ KHK + AAA SS ++ TE + L +SLP IC+ + N + AS
Sbjct: 1261 IHLKKHKAALAAAQYKSSNASETEPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQAS 1320
Query: 1037 GINVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQTC----MFPKETDIKT 1092
+ + L K L + KNT N + S+ E I+ C + +DI+
Sbjct: 1321 QTS-QPNYHTKLKKAWLTRHSEEDKNTNKMENSGN--SVSEIIKPCSVNLIASTSSDIQN 1377
Query: 1093 SENTAEFKERELCPLKTSKKLPENHLPRNSPQYHQPDLPEISRKNNGNNQQVPV----KN 1148
S ++ ++ + K +++ + S + D E + Q P +N
Sbjct: 1378 SVDSKIIVDKYVKDDKVNRRKAKRTYESGS-ESGDSDESESKSEQRTKRQPKPTYKKKQN 1436
Query: 1149 EVDHCENLKKVDTKPS---SEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQEKREGN 1205
++ + + D KP+ S ++ + + IP +D + KKL++ E
Sbjct: 1437 DLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSNSNTGIPRSVLKDWRKVKKLKQTGESF 1496
Query: 1206 LQN-------LNWSKSRTCRK-NKKRGVAPVSRP 1231
LQ+ N K R CR K+G P P
Sbjct: 1497 LQDDSCCEIGPNLQKCRECRLIRSKKGEEPAHSP 1530
>gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sapiens]
Length = 1555
Score = 36.2 bits (82), Expect = 0.26
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 1108 KTSKKLPENHLPRNSPQYHQPDLPEISRKNNGNNQQVPVKNEVDHCENLKKVDTK---PS 1164
KTSK +P L NS S++ + + K E+D ++ K +K P
Sbjct: 328 KTSKTIPSEKL--NS-----------SKQEKSKSGEKITKKELDQLDSKSKSKSKSPSPL 374
Query: 1165 SEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQEKREGNLQNLNWSKSRTCRKNKK 1222
K H ++ SE + + + DP KK LQ+K +G ++ K +T K K
Sbjct: 375 KNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK-EKRKTAEKKDK 431
Score = 33.5 bits (75), Expect = 1.7
Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 76/324 (23%)
Query: 923 ISPHSY---KSNCKNFL-DTYGPSDKGRGKNCLPVNTPQSRIQNAAKRSPATYGHSQKKH 978
IS HS+ +S+ K FL +T SD K T S N++K+ + G K
Sbjct: 302 ISQHSHGKDQSHRKEFLMNTLNQSDTKTSK------TIPSEKLNSSKQEKSKSGEKITKK 355
Query: 979 KCSVYYSKHKTSTAAASSTSTTTEEKQTSPLGSSLPAAKEDICTDAMRENWISLRYASGI 1038
+ SK K+ + K SPL + L K+
Sbjct: 356 ELDQLDSKSKSKS------------KSPSPLKNKLSHTKD-------------------- 383
Query: 1039 NVNLQKNLTLPKNLLNKEENTLKNTIVFSNPSSECSMKEGIQTC-MFPKETDIKTSEN-- 1095
+ Q++ ++ + +NK + LK + + +KE +T K+ +K+SE+
Sbjct: 384 -LKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDEHMKSSEHRL 442
Query: 1096 ------------------TAEFKERELCPLKTS-KKLPENHLPRN-SPQYHQPDLPEISR 1135
T E +++ P ++S +K + P++ SP H P + R
Sbjct: 443 AGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKRRD--R 500
Query: 1136 KNNGNNQQVPVKNEVDHCENLKKVDTKPSSEKKIHKTSREDMF---SEKQDIPFVEQEDP 1192
++ Q+ +++ K S ++ SRED S KQDI DP
Sbjct: 501 RSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSREDRNAKRSTKQDI-----RDP 555
Query: 1193 YRKKKLQEKREGNLQNLNWSKSRT 1216
R KK +E+R N + +KS T
Sbjct: 556 RRMKKTEEERPQETTNQHSTKSGT 579
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 35.8 bits (81), Expect = 0.34
Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 10/116 (8%)
Query: 1298 DKFCSDSSSDCGSSSGSVRASRGSWGSWSSTSSSDGDKKPMVDAQHFLPAGDSVSQNDFP 1357
D SDS C S+S + S SW+S S G P V L S +
Sbjct: 279 DSITSDSGWVCPSASWA-----SSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASG 333
Query: 1358 SEAPISLNLSHNICNPMTVNSLPQYAEPSCPSLPAGPTGVEEDKGLYSPGDLWPTP 1413
+ AP + + + ++ S +A PS A D G SP W +P
Sbjct: 334 ASAPSDSGWTSHSASGVSTTSDSGWASPS-----ASGASTSSDSGWASPSASWASP 384
>gi|116256340 SEC31 homolog A isoform 3 [Homo sapiens]
Length = 1205
Score = 35.8 bits (81), Expect = 0.34
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 1106 PLKTSKKLPENHLPRNSPQY--HQP-----DLPEISRKNNGNNQQVPVKNEVDHCENL-- 1156
PL + P+ HLP P + QP P S+ N P+ N H ++L
Sbjct: 1030 PLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPT 1089
Query: 1157 KKVDTKP-SSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
KK+ KP E I KT+ ED+ DP K+KL +
Sbjct: 1090 KKITKKPIPDEHLILKTTFEDLIQR----CLSSATDPQTKRKLDD 1130
>gi|116256338 SEC31 homolog A isoform 1 [Homo sapiens]
Length = 1220
Score = 35.8 bits (81), Expect = 0.34
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 1106 PLKTSKKLPENHLPRNSPQY--HQP-----DLPEISRKNNGNNQQVPVKNEVDHCENL-- 1156
PL + P+ HLP P + QP P S+ N P+ N H ++L
Sbjct: 1045 PLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPT 1104
Query: 1157 KKVDTKP-SSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
KK+ KP E I KT+ ED+ DP K+KL +
Sbjct: 1105 KKITKKPIPDEHLILKTTFEDLIQR----CLSSATDPQTKRKLDD 1145
>gi|116256336 SEC31 homolog A isoform 4 [Homo sapiens]
Length = 1106
Score = 35.8 bits (81), Expect = 0.34
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 1106 PLKTSKKLPENHLPRNSPQY--HQP-----DLPEISRKNNGNNQQVPVKNEVDHCENL-- 1156
PL + P+ HLP P + QP P S+ N P+ N H ++L
Sbjct: 931 PLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPT 990
Query: 1157 KKVDTKP-SSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
KK+ KP E I KT+ ED+ DP K+KL +
Sbjct: 991 KKITKKPIPDEHLILKTTFEDLIQR----CLSSATDPQTKRKLDD 1031
>gi|41349441 SEC31 homolog A isoform 2 [Homo sapiens]
Length = 1181
Score = 35.8 bits (81), Expect = 0.34
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 1106 PLKTSKKLPENHLPRNSPQY--HQP-----DLPEISRKNNGNNQQVPVKNEVDHCENL-- 1156
PL + P+ HLP P + QP P S+ N P+ N H ++L
Sbjct: 1006 PLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPT 1065
Query: 1157 KKVDTKP-SSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
KK+ KP E I KT+ ED+ DP K+KL +
Sbjct: 1066 KKITKKPIPDEHLILKTTFEDLIQR----CLSSATDPQTKRKLDD 1106
>gi|41349439 SEC31 homolog A isoform 1 [Homo sapiens]
Length = 1220
Score = 35.8 bits (81), Expect = 0.34
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 14/105 (13%)
Query: 1106 PLKTSKKLPENHLPRNSPQY--HQP-----DLPEISRKNNGNNQQVPVKNEVDHCENL-- 1156
PL + P+ HLP P + QP P S+ N P+ N H ++L
Sbjct: 1045 PLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPT 1104
Query: 1157 KKVDTKP-SSEKKIHKTSREDMFSEKQDIPFVEQEDPYRKKKLQE 1200
KK+ KP E I KT+ ED+ DP K+KL +
Sbjct: 1105 KKITKKPIPDEHLILKTTFEDLIQR----CLSSATDPQTKRKLDD 1145
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 35.4 bits (80), Expect = 0.45
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 506 GMHYFMGKSKAGNPNWNGSLSLDQSTWNVDSELANKLYERWKKYKNGDVCKRNVLGTTRF 565
G++YF K+K G W G +L + + D +L K+ W + +N +F
Sbjct: 202 GINYFEIKNKKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNIS------FNDKKF 255
Query: 566 AHLKKSKESESFVFFLPRL 584
K++ FVF+ PRL
Sbjct: 256 VIKPIDKKAPDFVFYAPRL 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,131,444
Number of Sequences: 37866
Number of extensions: 3195043
Number of successful extensions: 10556
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 10304
Number of HSP's gapped (non-prelim): 289
length of query: 1609
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1493
effective length of database: 13,855,062
effective search space: 20685607566
effective search space used: 20685607566
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.