Guide to the Human Genome
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Name: C2orf24 Sequence: fasta or formatted (410aa) NCBI GI: 187607437
Description:

hypothetical protein LOC27013

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         32           2
 C cysteine            4.1         17           1
 D aspartate           3.9         16           1
 E glutamate           5.6         23           4
 F phenylalanine       2.7         11           1
 G glycine             5.1         21           2
 H histidine           2.7         11           1
 I isoleucine          2.4         10           1
 K lysine              2.0          8           2
 L leucine            15.6         64           3
 M methionine          2.0          8           2
 N asparagine          1.5          6           1
 P proline             9.5         39           3
 Q glutamine           4.1         17           2
 R arginine            4.9         20           3
 S serine              9.8         40           3
 T threonine           3.9         16           1
 V valine              6.3         26           1
 W tryptophan          2.9         12           1
 Y tyrosine            3.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC27013 
PPRC1                 0.018   peroxisome proliferator-activated receptor gamma, co...
IGFN1                 0.017   immunoglobulin-like and fibronectin type III domain...
GPR37                 0.017   G protein-coupled receptor 37 
KRBA1                 0.016   KRAB A domain containing 1 
WBP11                 0.016   WW domain binding protein 11 
GGA3                  0.014   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.014   ADP-ribosylation factor binding protein 3 isoform lo...
CPSF7                 0.014   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
CPSF7                 0.014   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
CPSF7                 0.014   pre-mRNA cleavage factor I, 59 kDa subunit isoform ...
LOC100293421          0.013   PREDICTED: hypothetical protein 
LOC100294485          0.013   PREDICTED: hypothetical protein 
RAPH1                 0.013   Ras association and pleckstrin homology domains 1 is...
KPRP                  0.013   keratinocyte proline-rich protein 
RIMBP3B               0.013   RIMS binding protein 3B 
RIMBP3C               0.013   RIMS binding protein 3C 
RIMBP3                0.013   DKFZP434H0735 protein 
RIN3                  0.013   Ras and Rab interactor 3 
PRR11                 0.013   proline rich 11 
FMN2                  0.012   formin 2 
ABI3                  0.012   NESH protein isoform 2 
ABI3                  0.012   NESH protein isoform 1 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FMNL2                 0.011   formin-like 2 
MYPOP                 0.011   Myb protein P42POP 
WASF3                 0.011   WAS protein family, member 3 
SPEG                  0.011   SPEG complex locus 
FMN1                  0.011   formin 1 
MLL4                  0.011   myeloid/lymphoid or mixed-lineage leukemia 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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