| Name: LOC392145 | Sequence: fasta or formatted (174aa) | NCBI GI: 187282992 | |
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Description: hypothetical protein LOC392145
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.9 19 2 C cysteine 1.7 3 1 D aspartate 4.0 7 1 E glutamate 9.2 16 3 F phenylalanine 0.6 1 1 G glycine 8.6 15 3 H histidine 2.3 4 1 I isoleucine 0.0 0 0 K lysine 1.1 2 1 L leucine 17.2 30 3 M methionine 4.6 8 1 N asparagine 2.9 5 1 P proline 8.0 14 2 Q glutamine 2.9 5 1 R arginine 5.7 10 1 S serine 6.3 11 2 T threonine 6.3 11 1 V valine 5.2 9 2 W tryptophan 1.1 2 1 Y tyrosine 1.1 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC392145 EXOSC6 0.428 homolog of yeast mRNA transport regulator 3 EXOSC4 0.102 exosome component 4 EXOSC5 0.049 exosome component Rrp46 CYP11B1 0.015 cytochrome P450, family 11, subfamily B, polypeptide... CYP11B1 0.015 cytochrome P450, family 11, subfamily B, polypeptide... BSN 0.015 bassoon protein LOC100130644 0.015 PREDICTED: similar to hCG2036814 LOC100130644 0.015 PREDICTED: similar to hCG2036814 LOC100288276 0.015 PREDICTED: hypothetical protein XP_002342504 SPHK1 0.012 sphingosine kinase 1 isoform 3 SPHK1 0.012 sphingosine kinase 1 isoform 3 SPHK1 0.012 sphingosine kinase 1 isoform 1 SPHK1 0.012 sphingosine kinase 1 isoform 2 CDC42BPB 0.012 CDC42-binding protein kinase beta WDFY3 0.012 WD repeat and FYVE domain containing 3 isoform 1 [Ho... WDFY3 0.012 WD repeat and FYVE domain containing 3 isoform 2 [Ho... CYP11B2 0.009 cytochrome P450, family 11, subfamily B, polypeptid... RALGDS 0.009 ral guanine nucleotide dissociation stimulator isofo... RALGDS 0.009 ral guanine nucleotide dissociation stimulator isof... FIGLA 0.009 factor in the germline alpha RGS22 0.009 regulator of G-protein signaling 22 IRGQ 0.009 immunity-related GTPase family, Q AMBP 0.009 alpha-1-microglobulin/bikunin preproprotein PANX2 0.006 pannexin 2 isoform 1 PANX2 0.006 pannexin 2 isoform 2 IGSF2 0.006 immunoglobulin superfamily, member 2 GPR156 0.006 G protein-coupled receptor 156 POLR3GL 0.006 polymerase (RNA) III (DNA directed) polypeptide G (3...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
