SPHK1 13643

Name: SPHK1	Sequence: fasta or formatted (470aa)		NCBI GI: 217272880
Description: sphingosine kinase 1 isoform 2		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt prot [398aa] sphingosine kinase 1 isoform 1 alt prot [384aa] sphingosine kinase 1 isoform 3 alt prot [384aa] sphingosine kinase 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 49 3 C cysteine 1.7 8 1 D aspartate 3.2 15 1 E glutamate 6.8 32 2 F phenylalanine 3.0 14 1 G glycine 8.9 42 2 H histidine 2.8 13 1 I isoleucine 0.6 3 1 K lysine 2.3 11 1 L leucine 13.4 63 3 M methionine 3.6 17 1 N asparagine 2.1 10 1 P proline 9.1 43 3 Q glutamine 2.6 12 2 R arginine 7.2 34 2 S serine 5.7 27 1 T threonine 3.8 18 1 V valine 8.7 41 3 W tryptophan 1.7 8 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sphingosine kinase 1 isoform 2 SPHK1 0.811 sphingosine kinase 1 isoform 3 SPHK1 0.811 sphingosine kinase 1 isoform 3 SPHK1 0.804 sphingosine kinase 1 isoform 1 SPHK2 0.245 sphingosine kinase 2 CERK 0.074 ceramide kinase AGK 0.062 acylglycerol kinase CERKL 0.046 ceramide kinase-like isoform a CERKL 0.031 ceramide kinase-like isoform b LMTK3 0.015 lemur tyrosine kinase 3 SAMD1 0.015 sterile alpha motif domain containing 1 PHOX2B 0.013 paired-like homeobox 2b DGKI 0.013 diacylglycerol kinase, iota AGAP2 0.012 centaurin, gamma 1 isoform PIKE-L HCN4 0.012 hyperpolarization activated cyclic nucleotide-gated p... LOC100292853 0.011 PREDICTED: hypothetical protein LOC100288412 0.011 PREDICTED: hypothetical protein XP_002342328 LOC388199 0.011 PREDICTED: hypothetical protein LOC388199 COL1A2 0.011 alpha 2 type I collagen LOC100293055 0.011 PREDICTED: similar to COL22A1 protein CDC42EP1 0.011 CDC42 effector protein 1 GSPT1 0.011 G1 to S phase transition 1 isoform 1 DVL1 0.010 dishevelled 1 LOC100130884 0.010 PREDICTED: hypothetical protein LOC100292865 0.010 PREDICTED: hypothetical protein LOC100130884 0.010 PREDICTED: hypothetical protein LOC100130884 0.010 PREDICTED: hypothetical protein TXLNB 0.010 taxilin beta PLCH2 0.010 phospholipase C, eta 2 LOC100287514 0.010 PREDICTED: hypothetical protein XP_002343754 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.