Guide to the Human Genome
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Name: CYP11B1 Sequence: fasta or formatted (437aa) NCBI GI: 71067343
Description:

cytochrome P450, family 11, subfamily B, polypeptide 1 isoform 2 precursor

Referenced in:

Adrenals
Cytochrome P450 Enzymes
Steroid Hormones

Other entries for this name:
alt prot [503aa] cytochrome P450, family 11, subfamily B, polypeptide 1 isoform 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         39           4
 C cysteine            1.1          5           1
 D aspartate           3.0         13           1
 E glutamate           6.4         28           1
 F phenylalanine       4.8         21           1
 G glycine             4.1         18           2
 H histidine           3.0         13           1
 I isoleucine          3.2         14           1
 K lysine              3.4         15           3
 L leucine            14.4         63           3
 M methionine          3.2         14           1
 N asparagine          3.4         15           1
 P proline             6.2         27           1
 Q glutamine           5.9         26           2
 R arginine            7.1         31           2
 S serine              6.4         28           2
 T threonine           4.1         18           2
 V valine              7.1         31           1
 W tryptophan          1.8          8           1
 Y tyrosine            2.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 11, subfamily B, polypeptide... 
CYP11B1               0.956   cytochrome P450, family 11, subfamily B, polypeptide...
CYP11B2               0.880   cytochrome P450, family 11, subfamily B, polypeptid...
CYP11A1               0.274   cytochrome P450, family 11, subfamily A, polypeptid...
CYP11A1               0.173   cytochrome P450, family 11, subfamily A, polypeptid...
CYP24A1               0.163   cytochrome P450 family 24 subfamily A polypeptide 1...
CYP24A1               0.152   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP27B1               0.143   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP27A1               0.137   cytochrome P450, family 27, subfamily A, polypeptide ...
CYP27C1               0.100   cytochrome P450, family 27, subfamily C, polypeptid...
CYP3A43               0.041   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.041   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.041   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.039   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A4                0.037   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.034   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP4F12               0.034   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F8                0.032   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP21A2               0.028   cytochrome P450, family 21, subfamily A, polypeptid...
CYP21A2               0.028   cytochrome P450, family 21, subfamily A, polypeptide...
CYP4F11               0.026   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.026   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F3                0.026   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F2                0.025   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4V2                0.025   cytochrome P450, family 4, subfamily v, polypeptide...
CYP4F22               0.024   cytochrome P450, family 4, subfamily F, polypeptide...
CYP2U1                0.019   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP4A11               0.019   cytochrome P450, family 4, subfamily A, polypeptide...
CYP4Z1                0.019   cytochrome P450 4Z1 
CYP2R1                0.019   cytochrome P450, family 2, subfamily R, polypeptide ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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