Guide to the Human Genome
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Search of human proteins with 113411437

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113411437 PREDICTED: similar to UPF0627 protein
ENSP00000358171 isoform 1 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113411437 PREDICTED: similar to UPF0627 protein ENSP000003581...   353   3e-98
gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]           307   2e-84
gi|113403785 PREDICTED: hypothetical protein [Homo sapiens]           307   2e-84
gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]           291   2e-79
gi|19923812 oxysterol-binding protein-like protein 10 [Homo sapi...    33   0.15 
gi|144953895 nidogen 2 precursor [Homo sapiens]                        32   0.34 
gi|52694665 zinc finger and BTB domain containing 20 [Homo sapiens]    31   0.58 
gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]      30   0.76 
gi|239747649 PREDICTED: similar to Putative uncharacterized prot...    30   0.99 
gi|239747614 PREDICTED: similar to Putative uncharacterized prot...    30   0.99 
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]     29   1.7  
gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]     29   1.7  
gi|45269133 glial cells missing homolog a [Homo sapiens]               29   2.2  
gi|4758420 glial cells missing homolog 2 [Homo sapiens]                29   2.2  
gi|27734905 aprataxin and PNKP like factor [Homo sapiens]              29   2.2  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               28   2.9  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                28   2.9  
gi|239757545 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|239752128 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo ...    28   4.9  
gi|239751461 PREDICTED: hypothetical protein XP_002347871 [Homo ...    28   4.9  
gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo ...    28   4.9  
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]                28   4.9  
gi|66933005 calnexin precursor [Homo sapiens]                          27   6.4  
gi|10716563 calnexin precursor [Homo sapiens]                          27   6.4  
gi|4503617 exostoses-like 3 [Homo sapiens]                             27   6.4  
gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 ...    27   6.4  
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K...    27   6.4  
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]           27   6.4  
gi|157388908 hypothetical protein LOC54954 [Homo sapiens]              27   8.4  

>gi|113411437 PREDICTED: similar to UPF0627 protein ENSP00000358171
           isoform 1 [Homo sapiens]
          Length = 169

 Score =  353 bits (907), Expect = 3e-98
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60
           MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA
Sbjct: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60

Query: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120
           GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE
Sbjct: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120

Query: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169
           VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA
Sbjct: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169


>gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  307 bits (787), Expect = 2e-84
 Identities = 152/169 (89%), Positives = 156/169 (92%)

Query: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60
           M SSKGLWKE+PSAHTSECFSTTACPVA ILLVWNSQTPAGLQSLCTGRHPSLSARAQ A
Sbjct: 1   MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60

Query: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120
           GPRASREEGTFWTE VGQER LIRSGSSQNESQEDQGA LIS  GLKADN+RESSTWANE
Sbjct: 61  GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120

Query: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169
           VEDRRPQCT ALNLTPSH HPPH LTTF R+VIGI+IPPGLVA GGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169


>gi|113403785 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  307 bits (787), Expect = 2e-84
 Identities = 152/169 (89%), Positives = 156/169 (92%)

Query: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60
           M SSKGLWKE+PSAHTSECFSTTACPVA ILLVWNSQTPAGLQSLCTGRHPSLSARAQ A
Sbjct: 1   MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60

Query: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120
           GPRASREEGTFWTE VGQER LIRSGSSQNESQEDQGA LIS  GLKADN+RESSTWANE
Sbjct: 61  GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120

Query: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169
           VEDRRPQCT ALNLTPSH HPPH LTTF R+VIGI+IPPGLVA GGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169


>gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  291 bits (744), Expect = 2e-79
 Identities = 142/169 (84%), Positives = 151/169 (89%)

Query: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60
           MG SKGLWKE+PSAHTSECFSTTACPVA ILLVWNSQ+PAGLQS CTGRHPSLS RAQ A
Sbjct: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60

Query: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120
           G  ASREEGTFWTE VGQERRLI SGSS+NESQED+GADLI + GLKADN+R+SSTWANE
Sbjct: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120

Query: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169
           VEDRRPQ T ALNLTPSH HPP PL TF R+VIGI+IPPGLVA GGTVA
Sbjct: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169


>gi|19923812 oxysterol-binding protein-like protein 10 [Homo
           sapiens]
          Length = 764

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 21/99 (21%)

Query: 31  LLVWN---SQTPAGLQSLCTGRHPSLSARAQWAG-PRASREEGTFWTEPVGQERRLIRSG 86
           +L W+   S +   L++   G  PS SA   WA  P ++ +E T                
Sbjct: 316 ILGWHGSKSHSTEQLKNGTLGSLPSASANITWAILPNSAEDEQT---------------- 359

Query: 87  SSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRR 125
            SQ E + + G++L+  E  K+DN+ +  T    +ED+R
Sbjct: 360 -SQPEPEPNSGSELVLSEDEKSDNEDKEETELGVMEDQR 397


>gi|144953895 nidogen 2 precursor [Homo sapiens]
          Length = 1375

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 66   REEGTFWTEPVGQERRLIRSGSSQNESQED-QGADLISHEGLKADNQRESSTWANEVEDR 124
            RE   +WT+  G  R + R+G       E    + LIS EGL  D+ R +  W + V D+
Sbjct: 1152 RERMVYWTDVAG--RTISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVLDK 1209


>gi|52694665 zinc finger and BTB domain containing 20 [Homo sapiens]
          Length = 668

 Score = 30.8 bits (68), Expect = 0.58
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 60  AGPRASREEGTFWTEPVGQERRL---IRSGSSQNESQEDQ---GADLISHE---GLKADN 110
           +G  +  E G   + P     R+   + + S QN S E     GA +  HE   GL  D+
Sbjct: 148 SGQSSDTESGYLQSHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDH 207

Query: 111 QRESSTWANEVEDRRPQCTSALNLTPSHLH 140
             E  +W   + +R  Q    L+ TP   H
Sbjct: 208 HMEDPSWITRIHERSQQMERYLSTTPETTH 237


>gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]
          Length = 2539

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 74  EPVGQERRLI------RSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQ 127
           EP+G E  L+         +  +  +E++    + H+  +        T+A +V ++ P+
Sbjct: 230 EPLGVELHLLCEELLEACRTEGSPLREERLLSCLLHKASRGLLSLYGHTYAEKVTEKPPR 289

Query: 128 CTSALNLTPSHLHPPHPLTTFFRN 151
            T++  ++P HL P   +   F N
Sbjct: 290 ATASGKVSPDHLDPERAMLALFSN 313


>gi|239747649 PREDICTED: similar to Putative uncharacterized protein
           FLJ44672 [Homo sapiens]
          Length = 237

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 22  TTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGP 62
           T A P +   L W+ Q P GL+S+ + R PSL   A  AGP
Sbjct: 87  TVASPGSAPALRWHLQAPNGLRSVGSSR-PSLGLLAASAGP 126


>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
           FLJ44672 [Homo sapiens]
          Length = 259

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 22  TTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGP 62
           T A P +   L W+ Q P GL+S+ + R PSL   A  AGP
Sbjct: 88  TVASPGSAPALRWHLQAPNGLRSVGSSR-PSLGLLAASAGP 127


>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
          Length = 902

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 73  TEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQCTS-- 130
           T   G  +R + +GS ++    + G+  ++     A N +  ++W N+   RR    S  
Sbjct: 321 TSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWTNDQGARRKTVFSPT 380

Query: 131 --ALNLTPSHLHPPHPLTT 147
             A   +   L  P  +TT
Sbjct: 381 LPAARSSLGSLQTPEAVTT 399


>gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]
          Length = 699

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 73  TEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQCTS-- 130
           T   G  +R + +GS ++    + G+  ++     A N +  ++W N+   RR    S  
Sbjct: 321 TSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWTNDQGARRKTVFSPT 380

Query: 131 --ALNLTPSHLHPPHPLTT 147
             A   +   L  P  +TT
Sbjct: 381 LPAARSSLGSLQTPEAVTT 399


>gi|45269133 glial cells missing homolog a [Homo sapiens]
          Length = 436

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 97  GADLISHEGLKADNQRESSTWANEVEDRR--PQCTSALNLTPSHLHPPHPLTTFFRN 151
           G D ++ EG K   +      A + + R+  P C   L L P   H   P+T F+R+
Sbjct: 83  GRDCLAEEGRKIYLRPAICDKARQKQQRKRCPNCDGPLKLIPCRGHGGFPVTNFWRH 139


>gi|4758420 glial cells missing homolog 2 [Homo sapiens]
          Length = 506

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 126 PQCTSALNLTPSHLHPPHPLTTFFR 150
           P C SAL L P   H  +P+T F+R
Sbjct: 119 PNCHSALELIPCRGHSGYPVTNFWR 143


>gi|27734905 aprataxin and PNKP like factor [Homo sapiens]
          Length = 511

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 9/61 (14%)

Query: 80  RRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQCTSALNLTPSHL 139
           R+LI SGSS+N S E       + E  K  +Q ES+  + E+    PQ  SA+ L+ + +
Sbjct: 234 RQLISSGSSENTSAEQD-----TGEECKNTDQEESTISSKEM----PQSFSAITLSNTEM 284

Query: 140 H 140
           +
Sbjct: 285 N 285


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 5/128 (3%)

Query: 36  SQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQERRLIRSGSSQNESQED 95
           S T     +  + + P L          +  ++GT     VG E  L++ G S + + E 
Sbjct: 127 SSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNATET 186

Query: 96  QGADLISHEGLKADNQRESSTWANEVEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGI 155
            G D+      K     E   W     D      + L    S L P H       +V   
Sbjct: 187 SGPDMTIK---KPPQLSEDDIWLKSEGDN--YSATLLEPAASSLSPDHKNMEIEVSVAEC 241

Query: 156 KIPPGLVA 163
           K  PG+ +
Sbjct: 242 KSVPGITS 249


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 5/128 (3%)

Query: 36  SQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQERRLIRSGSSQNESQED 95
           S T     +  + + P L          +  ++GT     VG E  L++ G S + + E 
Sbjct: 127 SSTDGDAVNYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNATET 186

Query: 96  QGADLISHEGLKADNQRESSTWANEVEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGI 155
            G D+      K     E   W     D      + L    S L P H       +V   
Sbjct: 187 SGPDMTIK---KPPQLSEDDIWLKSEGDN--YSATLLEPAASSLSPDHKNMEIEVSVAEC 241

Query: 156 KIPPGLVA 163
           K  PG+ +
Sbjct: 242 KSVPGITS 249


>gi|239757545 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 21  STTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQER 80
           S +  PV   LLV   + P G   +  G   ++ ARA+ AGPRA    G+         R
Sbjct: 58  SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRAWAGRGS---------R 106

Query: 81  RLIRSGSSQNESQEDQGADLISHEGLKAD 109
           + +   +    ++ D G  L+   GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135


>gi|239752128 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 149

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 26/111 (23%)

Query: 53  LSARAQWAGPRASREEGTF----WTEPVGQ-ERRLIRSGSSQNESQEDQGADLISHEGLK 107
           ++  A   GPR SRE        WT  +G+ E R  R G       EDQG   ++  GL+
Sbjct: 1   MAQAASSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQ 60

Query: 108 A---------------------DNQRESSTWANEVEDRRPQCTSALNLTPS 137
           A                       QR SS  +N      PQ T    +TPS
Sbjct: 61  AAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPS 111


>gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo
           sapiens]
          Length = 145

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 21  STTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQER 80
           S +  PV   LLV   + P G   +  G   ++ ARA+ AGPRA    G+         R
Sbjct: 58  SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRAWAGRGS---------R 106

Query: 81  RLIRSGSSQNESQEDQGADLISHEGLKAD 109
           + +   +    ++ D G  L+   GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135


>gi|239751461 PREDICTED: hypothetical protein XP_002347871 [Homo
           sapiens]
          Length = 559

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 59  WAGPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWA 118
           W G RA RE       P+  +RR  R   ++ + +     +    E L   + R S    
Sbjct: 78  WGGGRA-RENEPDSQGPI--QRRSARPPRAKEKHRAALSEERSCREELGQQHPRHSRPRK 134

Query: 119 NEVEDRRPQCTSALNLTPSHLHPP 142
                 +PQ T A     SHL PP
Sbjct: 135 TAASPEKPQTTKATGRMNSHLAPP 158


>gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo
           sapiens]
          Length = 145

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 21  STTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQER 80
           S +  PV   LLV   + P G   +  G   ++ ARA+ AGPRA    G+         R
Sbjct: 58  SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRAWAGRGS---------R 106

Query: 81  RLIRSGSSQNESQEDQGADLISHEGLKAD 109
           + +   +    ++ D G  L+   GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135


>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
          Length = 2769

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 13/87 (14%)

Query: 79  ERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQ-----CTSALN 133
           ERR   S +   E +  Q +   S E LKA +Q     + + V+D  PQ     C +  N
Sbjct: 19  ERRYTSSSADSEEGKAPQKS-YSSSETLKAYDQDARLAYGSRVKDIVPQEAEEFCRTGAN 77

Query: 134 LTPSHL-----HPPHPLTTFFRNVIGI 155
            T   L      PPH   T +R  IG+
Sbjct: 78  FTLRELGLEEVTPPH--GTLYRTDIGL 102


>gi|66933005 calnexin precursor [Homo sapiens]
          Length = 592

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 74  EPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQC--TSA 131
           +P  +E    +        +E++G + +  E  K+D + +  T + E EDR+P+      
Sbjct: 521 QPDVKEEEEEKEEEKDKGDEEEEGEEKLE-EKQKSDAEEDGGTVSQEEEDRKPKAEEDEI 579

Query: 132 LNLTPSHLHP 141
           LN +P +  P
Sbjct: 580 LNRSPRNRKP 589


>gi|10716563 calnexin precursor [Homo sapiens]
          Length = 592

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 74  EPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANEVEDRRPQC--TSA 131
           +P  +E    +        +E++G + +  E  K+D + +  T + E EDR+P+      
Sbjct: 521 QPDVKEEEEEKEEEKDKGDEEEEGEEKLE-EKQKSDAEEDGGTVSQEEEDRKPKAEEDEI 579

Query: 132 LNLTPSHLHP 141
           LN +P +  P
Sbjct: 580 LNRSPRNRKP 589


>gi|4503617 exostoses-like 3 [Homo sapiens]
          Length = 919

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 124 RRPQCTSALNLTPSHLHPPHPLTTFFRNVIG 154
           R P C  AL+   SH H  H    FF  V G
Sbjct: 858 RCPGCPQALSHDDSHFHERHKCINFFVKVYG 888


>gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
           isoform 1 [Homo sapiens]
          Length = 953

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  QGADLISHEGLKADNQRESSTWANEVEDRRPQCTSALN 133
           +  +L+ H G   D QR+ +    E+ED+  +C   L+
Sbjct: 304 ENEELVQHLGAAKDAQRQLTAELRELEDKYAECMEMLH 341


>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
           isoform 2 [Homo sapiens]
          Length = 686

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  QGADLISHEGLKADNQRESSTWANEVEDRRPQCTSALN 133
           +  +L+ H G   D QR+ +    E+ED+  +C   L+
Sbjct: 246 ENEELVQHLGAAKDAQRQLTAELRELEDKYAECMEMLH 283


>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
          Length = 1958

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 34  WNSQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTE-PVGQERRLIRSGSSQNES 92
           W     A  Q + TG+ PSLS  +    P++S   GT   E PV Q  + +    ++ E 
Sbjct: 666 WVRTDSAPDQQVETGKSPSLSGASAKPAPQSSENAGTSDLELPVSQRNQDLSLQEAETEQ 725

Query: 93  QE 94
            +
Sbjct: 726 SD 727


>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
          Length = 1096

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 58   QWAGPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTW 117
            QWAG R+SR  G+F  + V         G  +   +E  G     H+  K + Q  S   
Sbjct: 967  QWAGSRSSRGRGSFGMQVVSV------GGPGKGHGKEQTGRGSKGHK--KGNKQGSSDGV 1018

Query: 118  ANEVEDRRPQCTSALN 133
            +  +E  + +  S +N
Sbjct: 1019 SKSLELHQGRSRSQVN 1034


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.128    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,126,012
Number of Sequences: 37866
Number of extensions: 376906
Number of successful extensions: 851
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 32
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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