Guide to the Human Genome
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Name: EXTL3 Sequence: fasta or formatted (919aa) NCBI GI: 4503617
Description:

exostoses-like 3

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         59           3
 C cysteine            2.0         18           1
 D aspartate           5.1         47           3
 E glutamate           6.9         63           3
 F phenylalanine       5.1         47           2
 G glycine             5.3         49           3
 H histidine           2.5         23           1
 I isoleucine          4.7         43           2
 K lysine              4.4         40           2
 L leucine            10.9        100           2
 M methionine          2.4         22           1
 N asparagine          4.1         38           2
 P proline             6.7         62           3
 Q glutamine           3.7         34           1
 R arginine            6.3         58           2
 S serine              6.0         55           2
 T threonine           5.1         47           2
 V valine              7.1         65           4
 W tryptophan          1.5         14           1
 Y tyrosine            3.8         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exostoses-like 3 
EXT2                  0.132   exostosin 2 isoform 2 
EXT2                  0.132   exostosin 2 isoform 1 
EXT1                  0.099   exostosin 1 
EXTL1                 0.070   exostoses-like 1 
EXTL2                 0.060   exostoses-like 2 
EXTL2                 0.060   exostoses-like 2 
MCC                   0.009   mutated in colorectal cancers isoform 1 
MCC                   0.009   mutated in colorectal cancers isoform 2 
GKAP1                 0.008   G kinase anchoring protein 1 isoform a 
CGN                   0.007   cingulin 
KIF20B                0.006   M-phase phosphoprotein 1 
SYNE2                 0.006   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.006   spectrin repeat containing, nuclear envelope 2 isof...
MYH1                  0.005   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH2                  0.005   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.005   myosin, heavy chain 2, skeletal muscle, adult [Homo...
GKAP1                 0.005   G kinase anchoring protein 1 isoform b 
GCC2                  0.005   GRIP and coiled-coil domain-containing 2 
ENPP1                 0.005   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
GOLGB1                0.005   golgi autoantigen, golgin subfamily b, macrogolgin ...
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
PLEC1                 0.005   plectin 1 isoform 7 
PLEC1                 0.005   plectin 1 isoform 6 
PLEC1                 0.005   plectin 1 isoform 3 
PLEC1                 0.005   plectin 1 isoform 2 
PLEC1                 0.005   plectin 1 isoform 1 
CCDC18                0.005   sarcoma antigen NY-SAR-41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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