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Search of human proteins with 113411427
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113411427 PREDICTED: hypothetical protein [Homo sapiens] 565 e-161
gi|169161400 PREDICTED: hypothetical protein [Homo sapiens] 550 e-157
gi|239741286 PREDICTED: hypothetical protein [Homo sapiens] 548 e-156
gi|239741283 PREDICTED: hypothetical protein XP_002344484 [Homo ... 537 e-153
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 41 0.001
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 41 0.001
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 41 0.001
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|112421108 capicua homolog [Homo sapiens] 37 0.014
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 37 0.018
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 37 0.024
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 37 0.024
gi|239754370 PREDICTED: hypothetical protein [Homo sapiens] 35 0.053
gi|239748924 PREDICTED: hypothetical protein [Homo sapiens] 35 0.053
gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo ... 35 0.053
gi|239742946 PREDICTED: hypothetical protein [Homo sapiens] 35 0.053
gi|239756303 PREDICTED: hypothetical protein [Homo sapiens] 35 0.069
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ... 35 0.069
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 35 0.090
gi|169171485 PREDICTED: hypothetical protein [Homo sapiens] 35 0.090
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 35 0.090
gi|239748921 PREDICTED: hypothetical protein XP_002346857 [Homo ... 35 0.090
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 35 0.090
gi|239742943 PREDICTED: hypothetical protein XP_002342700 [Homo ... 35 0.090
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 35 0.090
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 35 0.090
gi|110611246 xylosyltransferase II [Homo sapiens] 34 0.12
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.15
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 33 0.20
>gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 565 bits (1455), Expect = e-161
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|169161400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 550 bits (1416), Expect = e-157
Identities = 263/268 (98%), Positives = 263/268 (98%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFP RGGRKQPQPGSRQRKQNPISL GEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGTQEACLQA GTT GWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGA G
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|239741286 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 548 bits (1411), Expect = e-156
Identities = 262/268 (97%), Positives = 262/268 (97%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFP RGGRKQPQPGSRQRKQNPISL GEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGT EACLQA GTT GWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGA G
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|239741283 PREDICTED: hypothetical protein XP_002344484 [Homo
sapiens]
Length = 268
Score = 537 bits (1384), Expect = e-153
Identities = 257/268 (95%), Positives = 259/268 (96%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISL GEQNGR AT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLPGEQNGRTAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQ SRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQGSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGTQEACLQA GTT GWKYHALPLRLDPRSGH+GSA KA SC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQASGTTRGWKYHALPLRLDPRSGHSGSAFKASSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQL PNEPRNADVQTLHPTPSHTRRG+RT KGALG
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLSPNEPRNADVQTLHPTPSHTRRGRRTEKGALG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 21/133 (15%)
Query: 30 RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRG 89
RG R+Q Q GSR R ++ G +N R+ + R S SE RW R G
Sbjct: 15 RGRRRQSQSGSRSRSRSH----GRRNRRRREDEGRRRRRRRSRERRS--DSEEERWQRSG 68
Query: 90 RR--------WAERCPPGVLGAGR-------SLRAQRSRLHSRPPPLSPLRKPGGSNQPR 134
R W R +G + R +R+R S S PG S PR
Sbjct: 69 MRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
Query: 135 SAAAAGTQEACLQ 147
+AAAA +Q+ LQ
Sbjct: 129 AAAAALSQQQSLQ 141
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 21/133 (15%)
Query: 30 RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRG 89
RG R+Q Q GSR R ++ G +N R+ + R S SE RW R G
Sbjct: 15 RGRRRQSQSGSRSRSRSH----GRRNRRRREDEGRRRRRRRSRERRS--DSEEERWQRSG 68
Query: 90 RR--------WAERCPPGVLGAGR-------SLRAQRSRLHSRPPPLSPLRKPGGSNQPR 134
R W R +G + R +R+R S S PG S PR
Sbjct: 69 MRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
Query: 135 SAAAAGTQEACLQ 147
+AAAA +Q+ LQ
Sbjct: 129 AAAAALSQQQSLQ 141
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 40.8 bits (94), Expect = 0.001
Identities = 45/164 (27%), Positives = 62/164 (37%), Gaps = 37/164 (22%)
Query: 102 GAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALP 161
GAGR R +R R SR +P R+ G +PR A G+ + +A
Sbjct: 382 GAGRRRRRRRRRRRSRSSASAPRRR--GRRRPRPAPPRGSSRSLSRA------------- 426
Query: 162 LRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL 221
R SG A G P G RG G G ++ P A +
Sbjct: 427 -RSSSDSGSGRGAPGPGPEP---GSERGHGGHGKRAK------------ERPPRARPAST 470
Query: 222 HPTP-SHTRRGQRTGKGALG-----PRFWKSKNSPANRQSSALD 259
P+P +H RRG GK + PR W S SP+ +S + +
Sbjct: 471 SPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAE 514
>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 39.3 bits (90), Expect = 0.004
Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 36/158 (22%)
Query: 75 PSLCQSEGTRWSRRGRRWAE-----RCPPGVLGAGRSLRAQRSRLH---SRPPPLSPLRK 126
PS+C+ + SR + RCP G G++ R+ +LH +RP LSP+
Sbjct: 14 PSVCRQQPPGNSRVRPHFPHLGTRARCP---CGCGQARRSALQQLHGGGNRPSALSPVAA 70
Query: 127 P-----------GGSNQPRSAAAAGTQEAC----LQALGTTWGWKYH--------ALPLR 163
GG+ + + A + + C QA+ TTW Y P
Sbjct: 71 EGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSL 130
Query: 164 LDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWL 201
DP A +A K G LGGG G G P WL
Sbjct: 131 ADPGLDVAVAAAKPGGL--LGGGCTGAGTDPQPHPRWL 166
>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 37.4 bits (85), Expect = 0.014
Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 36/158 (22%)
Query: 75 PSLCQSEGTRWSRRGRRWAE-----RCPPGVLGAGRSLRAQRSRLH---SRPPPLSPLRK 126
PS+C+ + SR + RCP G G++ R+ +LH +RP LSP+
Sbjct: 14 PSVCRQQPPGNSRVRPHFPHLGTRARCP---CGCGQARRSALQQLHGGGNRPSALSPVAA 70
Query: 127 P-----------GGSNQPRSAAAAGTQEAC----LQALGTTWGWKYH--------ALPLR 163
GG+ + + + + C QA+ TTW Y P
Sbjct: 71 EGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSL 130
Query: 164 LDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWL 201
DP A +A K G LGGG G G P WL
Sbjct: 131 ADPGMDVAVAAAKPGGL--LGGGCTGAGTDPQPHPRWL 166
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 119 PPLSPLRKPGGSNQPRSAAA-AGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKA 177
PPLSP PG ++QP+ + T+ +Q+ G HALPL P S AG+
Sbjct: 979 PPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGG------HALPLGTSPASSQAGTVTSY 1032
Query: 178 GSCPRLGGGGRGRGEAG 194
G + G G +G
Sbjct: 1033 GPTSSVALGFTSLGPSG 1049
Score = 31.6 bits (70), Expect = 0.76
Identities = 40/142 (28%), Positives = 51/142 (35%), Gaps = 8/142 (5%)
Query: 28 PGRGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSR 87
PG R+ +PG + P S L Q A P R P L R S
Sbjct: 1200 PGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSA 1259
Query: 88 RG-RRWAERCPPG-----VLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGT 141
+G A + P V G G R + S P +P PGGS++ S AAG
Sbjct: 1260 KGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAP--APAVAPGGSSESSSGRAAGD 1317
Query: 142 QEACLQALGTTWGWKYHALPLR 163
+A GT K PL+
Sbjct: 1318 TPERKEAAGTGKKVKVRPPPLK 1339
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 37.0 bits (84), Expect = 0.018
Identities = 52/177 (29%), Positives = 61/177 (34%), Gaps = 38/177 (21%)
Query: 15 GSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGI 74
G+K P Q F GGR + QP Q P Q G A P +
Sbjct: 178 GNKPTPPRQEGSF---GGRPKSQPPLPQETAAP----APQPGPTAPPAR----------V 220
Query: 75 PSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP-------LSPLRKP 127
++EG R R A R PP G G RA RSR RP P + R P
Sbjct: 221 REPGRAEGASREPRLRSRAARPPPAP-GPGALSRASRSRAAGRPGPGFHGGEKAAAPRAP 279
Query: 128 GGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSCPRLG 184
GG R+ A G +A WG SG A L+ G C R G
Sbjct: 280 GGGG-GRNPGALGRAAPPSRARQDAWG------------LSGCATVGLRRGDCDRAG 323
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 36.6 bits (83), Expect = 0.024
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 41/212 (19%)
Query: 72 RGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSN 131
RG+ + + G + GRR R G+GR +++RSR P P GS
Sbjct: 49 RGLGAKVRVVGRPGNSGGRR---RAGNRAWGSGRRGKSRRSR--------GPGPWPAGSG 97
Query: 132 QPRSAAAAG---------TQEACLQALGTT-WGWKYHALPLRLDPRSGHAGSALKAGSCP 181
PR +A T A + +G + W + L+L G L G
Sbjct: 98 GPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSF----LKLSSSRSTRGLVLGEGVGV 153
Query: 182 RLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL-----HPTPSHTR------- 229
GG G G G AGA S S + L ++ ++D + P P+ +R
Sbjct: 154 GAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAG 213
Query: 230 ----RGQRTGKGALGPRFWKSKNSPANRQSSA 257
RG+R +G P + +SP+ ++SA
Sbjct: 214 GLRPRGKRPARGKKRPSSQRRCSSPSAARASA 245
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 36.6 bits (83), Expect = 0.024
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 41/212 (19%)
Query: 72 RGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSN 131
RG+ + + G + GRR R G+GR +++RSR P P GS
Sbjct: 49 RGLGAKVRVVGRPGNSGGRR---RAGNRAWGSGRRGKSRRSR--------GPGPWPAGSG 97
Query: 132 QPRSAAAAG---------TQEACLQALGTT-WGWKYHALPLRLDPRSGHAGSALKAGSCP 181
PR +A T A + +G + W + L+L G L G
Sbjct: 98 GPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSF----LKLSSSRSTRGLVLGEGVGV 153
Query: 182 RLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL-----HPTPSHTR------- 229
GG G G G AGA S S + L ++ ++D + P P+ +R
Sbjct: 154 GAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAG 213
Query: 230 ----RGQRTGKGALGPRFWKSKNSPANRQSSA 257
RG+R +G P + +SP+ ++SA
Sbjct: 214 GLRPRGKRPARGKKRPSSQRRCSSPSAARASA 245
>gi|239754370 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 35.4 bits (80), Expect = 0.053
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 17/126 (13%)
Query: 30 RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSE---GTRWS 86
RG + P PG+R P G P +G A P ++ G
Sbjct: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
Query: 87 RRG---------RRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAA 137
RG RR A CPP + A + A+R+RL+ L + PGG +PR +
Sbjct: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLN-----LPFIPGPGGRARPRWSF 372
Query: 138 AAGTQE 143
AG E
Sbjct: 373 TAGAPE 378
>gi|239748924 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 35.4 bits (80), Expect = 0.053
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 17/126 (13%)
Query: 30 RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSE---GTRWS 86
RG + P PG+R P G P +G A P ++ G
Sbjct: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
Query: 87 RRG---------RRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAA 137
RG RR A CPP + A + A+R+RL+ L + PGG +PR +
Sbjct: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLN-----LPFIPGPGGRARPRWSF 372
Query: 138 AAGTQE 143
AG E
Sbjct: 373 TAGAPE 378
>gi|239744733 PREDICTED: hypothetical protein XP_002343257 [Homo
sapiens]
Length = 659
Score = 35.4 bits (80), Expect = 0.053
Identities = 52/180 (28%), Positives = 69/180 (38%), Gaps = 32/180 (17%)
Query: 52 GEQNGRKATPQAGALGALG---IRGIPSLCQSEGTRWS-----RRGRRWAERCPPGVLGA 103
G++ GR +P A +G + RG P L +S T W+ R R A+ C
Sbjct: 6 GKRAGRDPSPSAPGIGQVRNSESRGAPYL-RSRCTGWTPTSQTRPSGRPADACAADSGRR 64
Query: 104 GRSLRAQRSRLHSR-----PPPLSPLR-KPGGSNQPRSAAAAGTQ-EACLQALGTTWG-W 155
S R RS + S P P R +PGG + A G + L TW W
Sbjct: 65 RASGRLGRSAVSSGVLWTDSPEAGPGRIRPGGVERGFGEPAKGEGFRGPVGRLIKTWASW 124
Query: 156 K----------YHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRG-----EAGAPSRFW 200
+LP RL PR +G++L CPR G G G E + SR W
Sbjct: 125 SPARPRPDGSIKASLPARLSPRPLGSGASLWPFVCPRFGAGREGASPVSLLERWSCSRMW 184
>gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 35.4 bits (80), Expect = 0.053
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 17/126 (13%)
Query: 30 RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSE---GTRWS 86
RG + P PG+R P G P +G A P ++ G
Sbjct: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
Query: 87 RRG---------RRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAA 137
RG RR A CPP + A + A+R+RL+ L + PGG +PR +
Sbjct: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLN-----LPFIPGPGGRARPRWSF 372
Query: 138 AAGTQE 143
AG E
Sbjct: 373 TAGAPE 378
>gi|239756303 PREDICTED: hypothetical protein [Homo sapiens]
Length = 232
Score = 35.0 bits (79), Expect = 0.069
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 37/143 (25%)
Query: 23 QRREFPG-RGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSE 81
+ R PG RG P G+ Q P G GRK + G LC+
Sbjct: 16 RHRACPGCRGSEVSPGEGAPGSGQRPA---GTSGGRKVLELSERYGE-------GLCRRV 65
Query: 82 GTRWSRRGR-----RWAERCPPGVLGAG------------------RSLRAQRSRLHSRP 118
G R ++G+ R++ RCPP V G G R RA+R++ RP
Sbjct: 66 GMR-RQQGKDSVWGRYSGRCPPLVSGLGEGPRLEGTQFKGRVFCPTRRHRARRAQAELRP 124
Query: 119 PPLSPLRKPGGSNQPRSAAAAGT 141
P + R GG + R AA T
Sbjct: 125 PEAA--RTGGGCGERRRRKAAAT 145
>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
sapiens]
Length = 201
Score = 35.0 bits (79), Expect = 0.069
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 26/114 (22%)
Query: 97 PPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWK 156
PPG A R R ++ R H L+P+R + +A A A L A + G
Sbjct: 41 PPGPSKAARRGRGEQVRTH-----LAPVRVLPNTAAEATAKRAPVPSAPLPAARSPRG-- 93
Query: 157 YHALPLRLDPRS-------GHAG------SALKAGSCPRLGGGGRGRGEAGAPS 197
P L PRS G G S L AG P LG GG GRG GAP+
Sbjct: 94 ----PQPLSPRSSWVRGMPGRGGHQRPLFSTLGAGFQPPLGRGGAGRG--GAPA 141
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 34.7 bits (78), Expect = 0.090
Identities = 53/210 (25%), Positives = 67/210 (31%), Gaps = 66/210 (31%)
Query: 85 WSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKP--------GGSNQPRSA 136
W RR RR A PG+ AG + ++ P P S LR+P GG S
Sbjct: 106 WGRRSRRAAG---PGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSG 162
Query: 137 AAAGT---------------------------QEACLQALGTTWG-----------WKYH 158
AGT Q LG++WG W H
Sbjct: 163 PRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRH 222
Query: 159 A------LPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAP-SRFWLPRSLQQLLPN 211
+R + GS L S G R RG G RF P S
Sbjct: 223 GGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSS------- 275
Query: 212 EPRNADVQTLHPTPSHTRRGQRTGKGALGP 241
+ +TL PTPS R G+ +G+ P
Sbjct: 276 --HSTGARTL-PTPSRARPGKPAPRGSAPP 302
>gi|169171485 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 34.7 bits (78), Expect = 0.090
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 10/118 (8%)
Query: 21 PWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQS 80
P RR PGRG + R LLG G PQA + G R +
Sbjct: 98 PPARRRLPGRGAGAEMPATLRAEVSGQQGLLGALRG----PQAWSAIRTGCRALEWAPHR 153
Query: 81 EGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAA 138
RW+R G R P GV G G R + + + P PLS + P G + + A
Sbjct: 154 GSRRWARLG----FRVPSGV-GWGGPERPKALKA-AWPAPLSTAKAPAGLSAAQQVTA 205
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 34.7 bits (78), Expect = 0.090
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 116 SRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSAL 175
S PP L K PR+A GTQ L A G+ G + RL + G A
Sbjct: 107 SGPPRQQRLNKVAEVPPPRAAHGRGTQ---LPAPGS--GLRGRGQRGRLSAATWRRGPAR 161
Query: 176 K--AGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPR 214
AGS R G G R AP R W P L +L P+ PR
Sbjct: 162 AELAGSGRRWWGVGEAREGRSAPPRDW-PEPLGELRPSAPR 201
>gi|239748921 PREDICTED: hypothetical protein XP_002346857 [Homo
sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/130 (28%), Positives = 49/130 (37%), Gaps = 18/130 (13%)
Query: 10 RQAAPGSKCRVPWQRREFPGRG-----GRKQPQPGSRQRKQNPISLLGEQNGRKATPQAG 64
R+A+PG R+ Q + PGR G P+PG R + G +A G
Sbjct: 12 RRASPGEG-RLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSP--GCSRPPRAADSPG 68
Query: 65 ALGALGIRGIPSLCQSEGTRWSRRGR----RWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
AL G R +P+ RW R R W PP R +Q P P
Sbjct: 69 ALPLCGTR-VPA-----DGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLP 122
Query: 121 LSPLRKPGGS 130
L P+R G+
Sbjct: 123 LHPIRASAGN 132
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 34.7 bits (78), Expect = 0.090
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 116 SRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSAL 175
S PP L K PR+A GTQ L A G+ G + RL + G A
Sbjct: 107 SGPPRQQRLNKVAEVPPPRAAHGRGTQ---LPAPGS--GLRGRGQRGRLSAATWRRGPAR 161
Query: 176 K--AGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPR 214
AGS R G G R AP R W P L +L P+ PR
Sbjct: 162 AELAGSGRRWWGVGEAREGRSAPPRDW-PEPLGELRPSAPR 201
>gi|239742943 PREDICTED: hypothetical protein XP_002342700 [Homo
sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/130 (28%), Positives = 49/130 (37%), Gaps = 18/130 (13%)
Query: 10 RQAAPGSKCRVPWQRREFPGRG-----GRKQPQPGSRQRKQNPISLLGEQNGRKATPQAG 64
R+A+PG R+ Q + PGR G P+PG R + G +A G
Sbjct: 12 RRASPGEG-RLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSP--GCSRPPRAADSPG 68
Query: 65 ALGALGIRGIPSLCQSEGTRWSRRGR----RWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
AL G R +P+ RW R R W PP R +Q P P
Sbjct: 69 ALPLCGTR-VPA-----DGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLP 122
Query: 121 LSPLRKPGGS 130
L P+R G+
Sbjct: 123 LHPIRASAGN 132
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 34.7 bits (78), Expect = 0.090
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 150 GTTWGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLP---RSLQ 206
G G Y P P + A S +K S R+ G G G G AG P P +S
Sbjct: 1570 GPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLTPPTILKSSS 1629
Query: 207 QLLPNEP-------RNADVQTLHPTPSH-TRRGQRTGKGALGPR 242
+P+EP R+ ++ P+PS G GA GPR
Sbjct: 1630 LSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPASGPGPGAPGPR 1673
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 34.7 bits (78), Expect = 0.090
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 103 AGRSLRAQRSR--LHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHAL 160
+GR ++ ++ LH+R PP P+ P G + AG L + G A
Sbjct: 318 SGREIKKRKCLFGLHARMPP--PVEPPTGDG---ALTRAGPWGRGLTSPGEAPEAGARAP 372
Query: 161 PLRLDPRSGHAGSALKAGSCPRL----GGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNA 216
+ SG AG+ L + R G G G A APS LP +L
Sbjct: 373 EEEAEGESGGAGATLSSAQSARAPGAEGAGSSAEGTAAAPSGCLLPSTLLPAPQGPLGTV 432
Query: 217 DVQTLHP 223
D QT HP
Sbjct: 433 DPQTGHP 439
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 34.3 bits (77), Expect = 0.12
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 22/121 (18%)
Query: 32 GRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRGRR 91
G ++ + G + R++ P L + + AG G+ G RR R
Sbjct: 37 GLEEDEAGEKGRQRKPRPLDPGEGSKDTDSSAGRRGSTG----------------RRHGR 80
Query: 92 WAERCPPGVLGAGRSLRA--QRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQAL 149
W R + + +RA R R R PP P PG N S AAAG EA + A
Sbjct: 81 WRGRAESPGVPVAKVVRAVTSRQRASRRVPPAPPPEAPGRQN--LSGAAAG--EALVGAA 136
Query: 150 G 150
G
Sbjct: 137 G 137
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.9 bits (76), Expect = 0.15
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 19/227 (8%)
Query: 14 PGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKATPQAGALGALGIR- 72
P S R R P GR + P ++ P+S G +G T + G LG G+R
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASG---TTRPGPLGQKGLRI 127
Query: 73 -GIPSLCQSEGTRWSRR------GRRWAERCPPGVLGAGRSLRAQRSRLH---SRPPPLS 122
++ + + T +R RR PG + R++ + RP P +
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187
Query: 123 PLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSCPR 182
R P + PR + ++ ++ + + L+ + SA S R
Sbjct: 188 RPRPP--TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245
Query: 183 LGGGGRGRGEAGAPSRFWLPRSLQQLLPNE---PRNADVQTLHPTPS 226
G RG A A P+ LQ L P + PR L P S
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 292
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 33.5 bits (75), Expect = 0.20
Identities = 45/159 (28%), Positives = 55/159 (34%), Gaps = 33/159 (20%)
Query: 89 GRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQA 148
G RW+ PG+ G R S PPP S R G P + EA L
Sbjct: 67 GARWSAGPAPGLEGGPRDPGP------SAPPPRSGPR--GQLASPDAPGPGPRSEAPLPE 118
Query: 149 LGTTWGWKYHALPLRLDPRSGHAGSALKAGSCP-----RLGGGG---RGRGEAGAPSRFW 200
L + W P P SCP RL G R RGE S F
Sbjct: 119 LDPLFSWTEE--PEECGP-----------ASCPESAPFRLQGSSSSHRARGEVDVFSPFP 165
Query: 201 LPRS----LQQLLPNEPRNADVQTLHPTPSHTRRGQRTG 235
P + L+Q + P+ +D+ HP PS Q G
Sbjct: 166 APTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDG 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,989,396
Number of Sequences: 37866
Number of extensions: 817207
Number of successful extensions: 4480
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 4219
Number of HSP's gapped (non-prelim): 522
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.