Guide to the Human Genome
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Name: HPX Sequence: fasta or formatted (462aa) NCBI GI: 11321561
Description:

hemopexin precursor

Referenced in:

Heme
Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         33           2
 C cysteine            2.8         13           1
 D aspartate           5.4         25           2
 E glutamate           5.2         24           2
 F phenylalanine       4.1         19           2
 G glycine             9.7         45           2
 H histidine           4.1         19           2
 I isoleucine          2.2         10           2
 K lysine              4.5         21           2
 L leucine             9.1         42           2
 M methionine          1.5          7           1
 N asparagine          3.0         14           1
 P proline             7.8         36           2
 Q glutamine           2.8         13           1
 R arginine            5.2         24           2
 S serine              6.9         32           2
 T threonine           5.0         23           2
 V valine              5.6         26           1
 W tryptophan          4.3         20           2
 Y tyrosine            3.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hemopexin precursor 
MMP10                 0.053   matrix metalloproteinase 10 preproprotein 
MMP12                 0.048   matrix metalloproteinase 12 preproprotein 
MMP17                 0.046   matrix metalloproteinase 17 preproprotein 
MMP3                  0.045   matrix metalloproteinase 3 preproprotein 
MMP19                 0.045   matrix metalloproteinase 19 isoform rasi-1 preproprot...
MMP11                 0.041   matrix metalloproteinase 11 preproprotein 
MMP15                 0.041   matrix metalloproteinase 15 preproprotein 
VTN                   0.038   vitronectin precursor 
MMP27                 0.036   matrix metalloproteinase 27 
MMP24                 0.035   matrix metalloproteinase 24 preproprotein 
MMP16                 0.035   matrix metalloproteinase 16 isoform 1 preproprotein ...
MMP14                 0.034   matrix metalloproteinase 14 preproprotein 
MMP13                 0.034   matrix metalloproteinase 13 preproprotein 
MMP8                  0.034   matrix metalloproteinase 8 preproprotein 
MMP1                  0.032   matrix metalloproteinase 1 isoform 2 
MMP1                  0.032   matrix metalloproteinase 1 isoform 1 preproprotein [H...
PRG4                  0.029   proteoglycan 4 isoform D 
PRG4                  0.029   proteoglycan 4 isoform C 
PRG4                  0.029   proteoglycan 4 isoform B 
PRG4                  0.029   proteoglycan 4 isoform A 
MMP20                 0.025   matrix metalloproteinase 20 preproprotein 
MMP2                  0.024   matrix metalloproteinase 2 isoform b 
MMP2                  0.024   matrix metalloproteinase 2 isoform a preproprotein [...
MMP25                 0.024   matrix metalloproteinase 25 preproprotein 
MMP9                  0.022   matrix metalloproteinase 9 preproprotein 
MMP21                 0.018   matrix metalloproteinase 21 preproprotein 
MMP28                 0.016   matrix metalloproteinase 28 isoform 1 preproprotein ...
DHRS12                0.016   dehydrogenase/reductase (SDR family) member 12 isofo...
ACTL7A                0.008   actin-like 7A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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