Guide to the Human Genome
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Name: MMP14 Sequence: fasta or formatted (582aa) NCBI GI: 4826834
Description:

matrix metalloproteinase 14 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         43           3
 C cysteine            1.0          6           1
 D aspartate           5.3         31           3
 E glutamate           6.5         38           3
 F phenylalanine       6.4         37           3
 G glycine             9.1         53           3
 H histidine           2.1         12           1
 I isoleucine          4.0         23           3
 K lysine              5.5         32           1
 L leucine             7.6         44           5
 M methionine          2.6         15           1
 N asparagine          3.6         21           2
 P proline             7.9         46           2
 Q glutamine           3.3         19           2
 R arginine            6.5         38           2
 S serine              5.0         29           3
 T threonine           4.5         26           2
 V valine              5.3         31           2
 W tryptophan          2.2         13           1
 Y tyrosine            4.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   matrix metalloproteinase 14 preproprotein 
MMP15                 0.555   matrix metalloproteinase 15 preproprotein 
MMP16                 0.542   matrix metalloproteinase 16 isoform 1 preproprotein ...
MMP24                 0.521   matrix metalloproteinase 24 preproprotein 
MMP16                 0.368   matrix metalloproteinase 16 isoform 2 preproprotein...
MMP25                 0.288   matrix metalloproteinase 25 preproprotein 
MMP17                 0.281   matrix metalloproteinase 17 preproprotein 
MMP11                 0.230   matrix metalloproteinase 11 preproprotein 
MMP13                 0.225   matrix metalloproteinase 13 preproprotein 
MMP3                  0.225   matrix metalloproteinase 3 preproprotein 
MMP8                  0.222   matrix metalloproteinase 8 preproprotein 
MMP12                 0.221   matrix metalloproteinase 12 preproprotein 
MMP20                 0.221   matrix metalloproteinase 20 preproprotein 
MMP10                 0.214   matrix metalloproteinase 10 preproprotein 
MMP1                  0.206   matrix metalloproteinase 1 isoform 1 preproprotein [H...
MMP1                  0.203   matrix metalloproteinase 1 isoform 2 
MMP27                 0.196   matrix metalloproteinase 27 
MMP19                 0.193   matrix metalloproteinase 19 isoform rasi-1 preproprot...
MMP28                 0.174   matrix metalloproteinase 28 isoform 1 preproprotein ...
MMP2                  0.145   matrix metalloproteinase 2 isoform b 
MMP2                  0.145   matrix metalloproteinase 2 isoform a preproprotein [...
MMP7                  0.131   matrix metalloproteinase 7 preproprotein 
MMP21                 0.102   matrix metalloproteinase 21 preproprotein 
MMP9                  0.092   matrix metalloproteinase 9 preproprotein 
MMP26                 0.089   matrix metalloproteinase 26 preproprotein 
MMP23B                0.049   matrix metalloproteinase 23B precursor 
VTN                   0.046   vitronectin precursor 
LOC100289688          0.043   PREDICTED: hypothetical protein XP_002347374 
LOC100128088          0.035   PREDICTED: similar to hCG2042634 
LOC100128088          0.035   PREDICTED: similar to hCG2042634 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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