MMP8 29011

Name: MMP8	Sequence: fasta or formatted (467aa)		NCBI GI: 4505221
Description: matrix metalloproteinase 8 preproprotein		Referenced in: Collagen Metalloproteases Neutrophils, Eosinophils, and Basophils
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 30 2 C cysteine 0.6 3 1 D aspartate 5.8 27 2 E glutamate 4.7 22 2 F phenylalanine 7.9 37 2 G glycine 7.1 33 2 H histidine 2.1 10 1 I isoleucine 5.4 25 1 K lysine 4.7 22 2 L leucine 7.7 36 4 M methionine 1.7 8 2 N asparagine 5.4 25 1 P proline 6.6 31 1 Q glutamine 5.6 26 2 R arginine 5.1 24 2 S serine 7.1 33 2 T threonine 5.1 24 2 V valine 4.1 19 1 W tryptophan 1.7 8 1 Y tyrosine 5.1 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrix metalloproteinase 8 preproprotein MMP1 0.566 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP1 0.528 matrix metalloproteinase 1 isoform 2 MMP3 0.503 matrix metalloproteinase 3 preproprotein MMP13 0.477 matrix metalloproteinase 13 preproprotein MMP10 0.473 matrix metalloproteinase 10 preproprotein MMP27 0.448 matrix metalloproteinase 27 MMP12 0.440 matrix metalloproteinase 12 preproprotein MMP20 0.420 matrix metalloproteinase 20 preproprotein MMP24 0.307 matrix metalloproteinase 24 preproprotein MMP16 0.302 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP15 0.294 matrix metalloproteinase 15 preproprotein MMP14 0.281 matrix metalloproteinase 14 preproprotein MMP16 0.231 matrix metalloproteinase 16 isoform 2 preproprotein... MMP17 0.224 matrix metalloproteinase 17 preproprotein MMP7 0.223 matrix metalloproteinase 7 preproprotein MMP25 0.220 matrix metalloproteinase 25 preproprotein MMP11 0.212 matrix metalloproteinase 11 preproprotein MMP2 0.197 matrix metalloproteinase 2 isoform b MMP2 0.197 matrix metalloproteinase 2 isoform a preproprotein [... MMP26 0.171 matrix metalloproteinase 26 preproprotein MMP19 0.167 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP28 0.155 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP9 0.124 matrix metalloproteinase 9 preproprotein MMP21 0.111 matrix metalloproteinase 21 preproprotein MMP23B 0.088 matrix metalloproteinase 23B precursor LOC100128088 0.083 PREDICTED: similar to hCG2042634 LOC100128088 0.075 PREDICTED: similar to hCG2042634 LOC100128088 0.075 PREDICTED: similar to hCG2042634 LOC100289688 0.045 PREDICTED: hypothetical protein XP_002347374 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.