MMP16 2950

Name: MMP16	Sequence: fasta or formatted (607aa)		NCBI GI: 13027802
Description: matrix metalloproteinase 16 isoform 1 preproprotein		Referenced in: Metalloproteases
Other entries for this name: alt prot [457aa] matrix metalloproteinase 16 isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 25 2 C cysteine 1.3 8 1 D aspartate 6.8 41 2 E glutamate 4.0 24 2 F phenylalanine 5.9 36 2 G glycine 8.1 49 2 H histidine 3.0 18 2 I isoleucine 5.9 36 2 K lysine 6.4 39 2 L leucine 6.4 39 2 M methionine 2.5 15 1 N asparagine 4.1 25 2 P proline 9.2 56 3 Q glutamine 3.3 20 2 R arginine 5.4 33 2 S serine 4.3 26 2 T threonine 6.3 38 2 V valine 5.9 36 1 W tryptophan 2.6 16 2 Y tyrosine 4.4 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP16 0.663 matrix metalloproteinase 16 isoform 2 preproprotein... MMP24 0.650 matrix metalloproteinase 24 preproprotein MMP15 0.532 matrix metalloproteinase 15 preproprotein MMP14 0.508 matrix metalloproteinase 14 preproprotein MMP25 0.270 matrix metalloproteinase 25 preproprotein MMP17 0.261 matrix metalloproteinase 17 preproprotein MMP8 0.224 matrix metalloproteinase 8 preproprotein MMP3 0.221 matrix metalloproteinase 3 preproprotein MMP13 0.218 matrix metalloproteinase 13 preproprotein MMP12 0.215 matrix metalloproteinase 12 preproprotein MMP11 0.211 matrix metalloproteinase 11 preproprotein MMP1 0.207 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP10 0.203 matrix metalloproteinase 10 preproprotein MMP1 0.202 matrix metalloproteinase 1 isoform 2 MMP20 0.196 matrix metalloproteinase 20 preproprotein MMP27 0.183 matrix metalloproteinase 27 MMP19 0.178 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP28 0.171 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP2 0.149 matrix metalloproteinase 2 isoform b MMP2 0.149 matrix metalloproteinase 2 isoform a preproprotein [... MMP7 0.121 matrix metalloproteinase 7 preproprotein MMP26 0.092 matrix metalloproteinase 26 preproprotein MMP9 0.090 matrix metalloproteinase 9 preproprotein MMP21 0.082 matrix metalloproteinase 21 preproprotein MMP23B 0.059 matrix metalloproteinase 23B precursor VTN 0.042 vitronectin precursor LOC100128088 0.042 PREDICTED: similar to hCG2042634 LOC100289688 0.040 PREDICTED: hypothetical protein XP_002347374 LOC100128088 0.040 PREDICTED: similar to hCG2042634 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.