MMP13 29005

Name: MMP13	Sequence: fasta or formatted (471aa)		NCBI GI: 4505209
Description: matrix metalloproteinase 13 preproprotein		Referenced in: Collagen Metalloproteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 25 2 C cysteine 0.8 4 1 D aspartate 8.7 41 3 E glutamate 5.7 27 2 F phenylalanine 6.8 32 2 G glycine 7.4 35 2 H histidine 3.8 18 1 I isoleucine 5.1 24 1 K lysine 6.2 29 2 L leucine 9.1 43 2 M methionine 2.5 12 1 N asparagine 3.8 18 1 P proline 7.0 33 2 Q glutamine 1.7 8 2 R arginine 4.0 19 1 S serine 6.4 30 3 T threonine 4.7 22 1 V valine 4.2 20 1 W tryptophan 2.1 10 1 Y tyrosine 4.5 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrix metalloproteinase 13 preproprotein MMP3 0.478 matrix metalloproteinase 3 preproprotein MMP10 0.468 matrix metalloproteinase 10 preproprotein MMP8 0.465 matrix metalloproteinase 8 preproprotein MMP1 0.445 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP27 0.428 matrix metalloproteinase 27 MMP1 0.426 matrix metalloproteinase 1 isoform 2 MMP12 0.412 matrix metalloproteinase 12 preproprotein MMP20 0.403 matrix metalloproteinase 20 preproprotein MMP16 0.286 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP14 0.277 matrix metalloproteinase 14 preproprotein MMP24 0.276 matrix metalloproteinase 24 preproprotein MMP15 0.256 matrix metalloproteinase 15 preproprotein MMP17 0.226 matrix metalloproteinase 17 preproprotein MMP7 0.224 matrix metalloproteinase 7 preproprotein MMP16 0.220 matrix metalloproteinase 16 isoform 2 preproprotein... MMP11 0.213 matrix metalloproteinase 11 preproprotein MMP25 0.206 matrix metalloproteinase 25 preproprotein MMP2 0.204 matrix metalloproteinase 2 isoform b MMP2 0.204 matrix metalloproteinase 2 isoform a preproprotein [... MMP19 0.197 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP26 0.176 matrix metalloproteinase 26 preproprotein MMP28 0.173 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP9 0.159 matrix metalloproteinase 9 preproprotein MMP21 0.104 matrix metalloproteinase 21 preproprotein MMP23B 0.078 matrix metalloproteinase 23B precursor LOC100128088 0.068 PREDICTED: similar to hCG2042634 LOC100128088 0.066 PREDICTED: similar to hCG2042634 LOC100128088 0.066 PREDICTED: similar to hCG2042634 LOC100289688 0.053 PREDICTED: hypothetical protein XP_002347374 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.