Guide to the Human Genome
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Name: LRRC31 Sequence: fasta or formatted (552aa) NCBI GI: 113205085
Description:

leucine rich repeat containing 31

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         26           2
 C cysteine            2.5         14           1
 D aspartate           5.6         31           2
 E glutamate           6.7         37           3
 F phenylalanine       3.4         19           1
 G glycine             5.4         30           3
 H histidine           1.8         10           1
 I isoleucine          4.0         22           1
 K lysine              7.4         41           2
 L leucine            17.4         96           3
 M methionine          2.7         15           1
 N asparagine          4.7         26           2
 P proline             2.5         14           1
 Q glutamine           5.3         29           2
 R arginine            3.3         18           1
 S serine             10.7         59           3
 T threonine           5.1         28           2
 V valine              4.7         26           1
 W tryptophan          1.4          8           1
 Y tyrosine            0.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 31 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
RNH1                  0.080   ribonuclease/angiogenin inhibitor 
NLRP12                0.048   NLR family, pyrin domain containing 12 isoform 2 [Ho...
NLRC5                 0.047   nucleotide-binding oligomerization domains 27 [Homo...
NLRP14                0.040   NLR family, pyrin domain containing 14 
NLRP12                0.037   NLR family, pyrin domain containing 12 isoform 1 [Ho...
NLRP13                0.036   NACHT, leucine rich repeat and PYD containing 13 [H...
NLRC4                 0.034   caspase recruitment domain protein 12 
NLRP1                 0.033   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.033   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.033   NLR family, pyrin domain containing 1 isoform 1 [Hom...
NLRP4                 0.032   NLR family, pyrin domain containing 4 
NLRP1                 0.032   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.032   NLR family, pyrin domain containing 1 isoform 3 [Hom...
NLRP5                 0.029   NACHT, LRR and PYD containing protein 5 
RANGAP1               0.029   Ran GTPase activating protein 1 
FLII                  0.028   flightless I homolog 
NLRP2                 0.027   NLR family, pyrin domain containing 2 
NLRP7                 0.027   NACHT, leucine rich repeat and PYD containing 7 iso...
NLRP7                 0.027   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP11                0.025   NLR family, pyrin domain containing 11 
NLRC3                 0.025   NOD3 protein 
LRRIQ4                0.025   leucine-rich repeats and IQ motif containing 4 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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