Guide to the Human Genome
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Name: IL11 Sequence: fasta or formatted (199aa) NCBI GI: 10834994
Description:

interleukin 11 precursor

Referenced in:

Interleukins and Their Receptors
Hematopoiesis and Erythrocytes
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         22           2
 C cysteine            1.0          2           1
 D aspartate           6.0         12           1
 E glutamate           1.5          3           1
 F phenylalanine       0.5          1           1
 G glycine             7.0         14           2
 H histidine           2.0          4           1
 I isoleucine          1.0          2           1
 K lysine              1.5          3           1
 L leucine            22.6         45           4
 M methionine          1.5          3           1
 N asparagine          1.0          2           1
 P proline            11.6         23           3
 Q glutamine           3.5          7           1
 R arginine            9.5         19           2
 S serine              6.0         12           2
 T threonine           5.0         10           1
 V valine              5.0         10           2
 W tryptophan          2.0          4           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 11 precursor 
KCNN1                 0.032   potassium intermediate/small conductance calcium-act...
TNRC18                0.032   trinucleotide repeat containing 18 
DIAPH2                0.029   diaphanous 2 isoform 12C 
DIAPH2                0.029   diaphanous 2 isoform 156 
FMN1                  0.029   formin 1 
SALL3                 0.029   sal-like 3 
MICALCL               0.029   MICAL C-terminal like 
PCLO                  0.027   piccolo isoform 2 
PCLO                  0.027   piccolo isoform 1 
C9orf75               0.027   hypothetical protein LOC286262 isoform 2 
C9orf75               0.027   hypothetical protein LOC286262 isoform 1 
ZIC5                  0.024   zinc finger protein of the cerebellum 5 
FOXK1                 0.024   forkhead box K1 
LOC653073             0.021   PREDICTED: Golgin subfamily A member 8-like protein...
MEX3C                 0.021   ring finger and KH domain containing 2 
TXLNB                 0.021   taxilin beta 
VASP                  0.021   vasodilator-stimulated phosphoprotein 
SORBS3                0.021   sorbin and SH3 domain containing 3 isoform 1 
ZFHX3                 0.021   AT-binding transcription factor 1 
USP51                 0.021   ubiquitin specific protease 51 
WIPF3                 0.021   WAS/WASL interacting protein family, member 3 [Homo...
LMOD2                 0.021   leiomodin 2 (cardiac) 
WT1                   0.019   Wilms tumor 1 isoform D 
WT1                   0.019   Wilms tumor 1 isoform C 
WT1                   0.019   Wilms tumor 1 isoform B 
WT1                   0.019   Wilms tumor 1 isoform A 
LOC645971             0.019   PREDICTED: similar to hCG2036794 
LOC645971             0.019   PREDICTED: similar to hCG2036794 
LOC645971             0.019   PREDICTED: similar to hCG2036794 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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