CHMP1A 130

Name: CHMP1A	Sequence: fasta or formatted (196aa)		NCBI GI: 103485496
Description: chromatin modifying protein 1A isoform 2		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [240aa] chromatin modifying protein 1A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 22 2 C cysteine 0.5 1 1 D aspartate 6.1 12 2 E glutamate 7.7 15 2 F phenylalanine 1.5 3 1 G glycine 2.6 5 1 H histidine 0.5 1 1 I isoleucine 1.5 3 1 K lysine 9.7 19 2 L leucine 10.2 20 2 M methionine 4.6 9 1 N asparagine 4.1 8 1 P proline 1.0 2 1 Q glutamine 8.7 17 2 R arginine 4.6 9 2 S serine 8.7 17 2 T threonine 6.1 12 2 V valine 9.7 19 1 W tryptophan 0.5 1 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromatin modifying protein 1A isoform 2 CHMP1B 0.541 chromatin modifying protein 1B CHMP2A 0.166 chromatin modifying protein 2A CHMP2A 0.166 chromatin modifying protein 2A DAB1 0.038 disabled homolog 1 CENPF 0.032 centromere protein F DHX58 0.029 RNA helicase LGP2 CHMP4B 0.029 chromatin modifying protein 4B CAMSAP1 0.026 calmodulin regulated spectrin-associated protein 1 ... CEP250 0.023 centrosomal protein 2 TRIM71 0.023 tripartite motif-containing 71 C10orf118 0.020 CTCL tumor antigen L14-2 CAMK2D 0.020 calcium/calmodulin-dependent protein kinase II delt... DNAJC2 0.020 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... SPTBN5 0.020 spectrin, beta, non-erythrocytic 5 SDCCAG8 0.020 serologically defined colon cancer antigen 8 EIF3A 0.017 eukaryotic translation initiation factor 3, subunit 1... RAPGEF4 0.017 Rap guanine nucleotide exchange factor (GEF) 4 isof... RAPGEF4 0.017 Rap guanine nucleotide exchange factor (GEF) 4 isof... CCDC91 0.017 GGA binding partner MYH15 0.017 myosin, heavy polypeptide 15 DHRS7C 0.017 dehydrogenase/reductase (SDR family) member 7C [Hom... SPAG5 0.015 sperm associated antigen 5 UTRN 0.015 utrophin CDR2 0.015 cerebellar degeneration-related protein 2 NUMA1 0.015 nuclear mitotic apparatus protein 1 SMC1B 0.015 SMC1 structural maintenance of chromosomes 1-like 2 ... SMC2 0.015 structural maintenance of chromosomes 2 SMC2 0.015 structural maintenance of chromosomes 2 SMC2 0.015 structural maintenance of chromosomes 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.