CHMP1B 25481

Name: CHMP1B	Sequence: fasta or formatted (199aa)		NCBI GI: 31542306
Description: chromatin modifying protein 1B		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 23 2 C cysteine 0.5 1 1 D aspartate 5.5 11 1 E glutamate 8.0 16 2 F phenylalanine 2.5 5 1 G glycine 3.5 7 1 H histidine 1.5 3 1 I isoleucine 2.5 5 1 K lysine 9.5 19 2 L leucine 8.5 17 2 M methionine 7.0 14 1 N asparagine 4.5 9 1 P proline 1.0 2 1 Q glutamine 8.0 16 2 R arginine 4.5 9 1 S serine 6.5 13 2 T threonine 7.5 15 3 V valine 7.0 14 2 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromatin modifying protein 1B CHMP1A 0.525 chromatin modifying protein 1A isoform 2 CHMP2A 0.189 chromatin modifying protein 2A CHMP2A 0.189 chromatin modifying protein 2A CHMP2B 0.113 chromatin modifying protein 2B VPS24 0.062 vacuolar protein sorting 24 isoform 1 GOLGA8B 0.048 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.048 golgi autoantigen, golgin subfamily a, 8A CHMP7 0.037 CHMP family, member 7 CCDC152 0.034 coiled-coil domain containing 152 GOLGA8E 0.028 golgi autoantigen, golgin subfamily a, 8E TNIP1 0.028 TNFAIP3 interacting protein 1 LOC643699 0.028 PREDICTED: similar to golgi autoantigen, golgin sub... MYH2 0.025 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.025 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH13 0.025 myosin, heavy polypeptide 13, skeletal muscle [Homo... PSIP1 0.023 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.023 PC4 and SFRS1 interacting protein 1 isoform 2 MYH3 0.023 myosin, heavy chain 3, skeletal muscle, embryonic [H... GCC1 0.023 Golgi coiled-coil protein 1 TSGA10 0.023 testis specific, 10 TSGA10 0.023 testis specific, 10 LOC653061 0.020 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653061 0.020 PREDICTED: similar to Golgin subfamily A member 8-l... ODF2 0.020 outer dense fiber of sperm tails 2 isoform 1 GOLGA8G 0.020 golgi autoantigen, golgin subfamily a, 8G SYNE1 0.020 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.020 spectrin repeat containing, nuclear envelope 1 isof... NUMA1 0.017 nuclear mitotic apparatus protein 1 MYH1 0.017 myosin, heavy chain 1, skeletal muscle, adult [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.