Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OSCAR Sequence: fasta or formatted (286aa) NCBI GI: 45580719
Description:

osteoclast-associated receptor isoform 1

Referenced in:

Bone and Related Tissues
Additional Genes in Development

Other entries for this name:
alt prot [252aa] osteoclast-associated receptor isoform 5
alt prot [263aa] osteoclast-associated receptor isoform 4
alt prot [267aa] osteoclast-associated receptor isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         27           2
 C cysteine            2.1          6           2
 D aspartate           3.1          9           1
 E glutamate           4.5         13           2
 F phenylalanine       2.8          8           2
 G glycine             7.7         22           2
 H histidine           1.4          4           1
 I isoleucine          2.4          7           2
 K lysine              0.7          2           1
 L leucine            11.5         33           2
 M methionine          1.0          3           1
 N asparagine          1.0          3           1
 P proline            15.0         43           3
 Q glutamine           4.5         13           1
 R arginine            6.3         18           2
 S serine              8.0         23           2
 T threonine           4.2         12           1
 V valine              8.0         23           2
 W tryptophan          2.8          8           1
 Y tyrosine            3.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osteoclast-associated receptor isoform 1 
OSCAR                 0.769   osteoclast-associated receptor isoform 3 
OSCAR                 0.748   osteoclast-associated receptor isoform 4 
OSCAR                 0.692   osteoclast-associated receptor isoform 5 
IGSF1                 0.210   immunoglobulin superfamily, member 1 isoform 1 [Homo...
KIR3DL3               0.139   killer cell immunoglobulin-like receptor, three doma...
LILRB4                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.132   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA2                0.132   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRA2                0.130   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA1                0.127   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB3                0.127   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.127   leukocyte immunoglobulin-like receptor, subfamily B...
KIR2DL5B              0.125   killer cell immunoglobulin-like receptor, two domain...
KIR3DL2               0.125   killer cell immunoglobulin-like receptor, three dom...
KIR2DL5A              0.125   killer cell immunoglobulin-like receptor, two domain...
KIR2DL4               0.123   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.123   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.123   killer cell immunoglobulin-like receptor, two domai...
LILRB2                0.123   leukocyte immunoglobulin-like receptor, subfamily B...
GP6                   0.122   glycoprotein VI (platelet) isoform 1 
GP6                   0.122   glycoprotein VI (platelet) isoform 2 
LILRB2                0.120   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA5                0.120   leukocyte immunoglobulin-like receptor subfamily A m...
LILRB5                0.120   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.118   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.118   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA5                0.118   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.118   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA4                0.118   leukocyte immunoglobulin-like receptor subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press