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Name: CAMK2D Sequence: fasta or formatted (478aa) NCBI GI: 26667189
Description:

calcium/calmodulin-dependent protein kinase II delta isoform 2

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [492aa] calcium/calmodulin-dependent protein kinase II delta isoform 5
alt prot [489aa] calcium/calmodulin-dependent protein kinase II delta isoform 4
alt prot [499aa] calcium/calmodulin-dependent protein kinase II delta isoform 3
alt prot [478aa] calcium/calmodulin-dependent protein kinase II delta isoform 1
alt prot [478aa] calcium/calmodulin-dependent protein kinase II delta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         38           2
 C cysteine            2.1         10           1
 D aspartate           5.6         27           2
 E glutamate           7.3         35           2
 F phenylalanine       4.0         19           1
 G glycine             5.9         28           2
 H histidine           3.8         18           1
 I isoleucine          6.5         31           2
 K lysine              7.1         34           2
 L leucine             8.6         41           3
 M methionine          2.3         11           2
 N asparagine          3.8         18           2
 P proline             4.6         22           2
 Q glutamine           3.8         18           2
 R arginine            5.2         25           2
 S serine              5.4         26           2
 T threonine           6.1         29           3
 V valine              5.4         26           2
 W tryptophan          1.5          7           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase II delta... 
CAMK2D                0.997   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.997   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.997   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.988   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.987   calcium/calmodulin-dependent protein kinase II delt...
CAMK2B                0.901   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.888   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.886   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.884   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.882   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2A                0.881   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.877   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.876   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2A                0.872   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2G                0.868   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.868   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.857   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.843   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.807   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.615   calcium/calmodulin-dependent protein kinase II beta ...
CASK                  0.274   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.274   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.274   calcium/calmodulin-dependent serine protein kinase ...
CAMK4                 0.235   calcium/calmodulin-dependent protein kinase IV 
CAMK1D                0.221   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1D                0.221   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1                 0.213   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.211   calcium/calmodulin-dependent protein kinase IG [Homo...
PNCK                  0.209   pregnancy upregulated non-ubiquitously expressed Ca...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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