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Name: CAMK2B Sequence: fasta or formatted (542aa) NCBI GI: 26051206
Description:

calcium/calmodulin-dependent protein kinase II beta isoform 2

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [666aa] calcium/calmodulin-dependent protein kinase II beta isoform 1
alt prot [518aa] calcium/calmodulin-dependent protein kinase II beta isoform 3
alt prot [517aa] calcium/calmodulin-dependent protein kinase II beta isoform 4
alt prot [503aa] calcium/calmodulin-dependent protein kinase II beta isoform 5
alt prot [492aa] calcium/calmodulin-dependent protein kinase II beta isoform 6
alt prot [479aa] calcium/calmodulin-dependent protein kinase II beta isoform 7
alt prot [449aa] calcium/calmodulin-dependent protein kinase II beta isoform 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         53           3
 C cysteine            2.4         13           1
 D aspartate           4.8         26           1
 E glutamate           7.0         38           2
 F phenylalanine       3.3         18           1
 G glycine             6.1         33           2
 H histidine           3.9         21           1
 I isoleucine          5.7         31           2
 K lysine              6.6         36           2
 L leucine             8.3         45           3
 M methionine          1.7          9           2
 N asparagine          3.7         20           2
 P proline             4.6         25           2
 Q glutamine           4.6         25           2
 R arginine            4.8         26           2
 S serine              5.0         27           2
 T threonine           7.4         40           2
 V valine              6.1         33           2
 W tryptophan          1.3          7           1
 Y tyrosine            3.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase II beta ... 
CAMK2B                0.944   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.944   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.906   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.881   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.854   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.837   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.828   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.821   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.812   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.809   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.792   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.770   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.766   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.766   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.766   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.765   calcium/calmodulin-dependent protein kinase II delta...
CAMK2A                0.747   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.744   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2A                0.743   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.579   calcium/calmodulin-dependent protein kinase II beta ...
CASK                  0.232   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.232   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.232   calcium/calmodulin-dependent serine protein kinase ...
CAMK1D                0.196   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1D                0.196   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK4                 0.193   calcium/calmodulin-dependent protein kinase IV 
CAMK1                 0.185   calcium/calmodulin-dependent protein kinase I 
DCLK2                 0.183   doublecortin-like kinase 2 isoform b 
DCLK2                 0.183   doublecortin-like kinase 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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