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Name: CAMK2B Sequence: fasta or formatted (503aa) NCBI GI: 26051212
Description:

calcium/calmodulin-dependent protein kinase II beta isoform 5

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [666aa] calcium/calmodulin-dependent protein kinase II beta isoform 1
alt prot [542aa] calcium/calmodulin-dependent protein kinase II beta isoform 2
alt prot [518aa] calcium/calmodulin-dependent protein kinase II beta isoform 3
alt prot [517aa] calcium/calmodulin-dependent protein kinase II beta isoform 4
alt prot [492aa] calcium/calmodulin-dependent protein kinase II beta isoform 6
alt prot [479aa] calcium/calmodulin-dependent protein kinase II beta isoform 7
alt prot [449aa] calcium/calmodulin-dependent protein kinase II beta isoform 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         50           3
 C cysteine            2.6         13           1
 D aspartate           5.0         25           1
 E glutamate           7.2         36           2
 F phenylalanine       3.6         18           1
 G glycine             5.8         29           2
 H histidine           4.0         20           1
 I isoleucine          5.8         29           2
 K lysine              7.0         35           2
 L leucine             8.7         44           3
 M methionine          1.4          7           2
 N asparagine          3.8         19           2
 P proline             4.4         22           2
 Q glutamine           4.4         22           2
 R arginine            5.0         25           2
 S serine              5.0         25           2
 T threonine           6.4         32           2
 V valine              5.8         29           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase II beta ... 
CAMK2B                0.990   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.984   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.975   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.940   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.876   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.873   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.869   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.863   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2G                0.856   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.856   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.853   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.850   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.844   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.844   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.844   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.844   calcium/calmodulin-dependent protein kinase II delta...
CAMK2A                0.823   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.818   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.803   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.701   calcium/calmodulin-dependent protein kinase II beta ...
CASK                  0.250   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.250   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.250   calcium/calmodulin-dependent serine protein kinase ...
CAMK1D                0.217   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1D                0.211   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK4                 0.210   calcium/calmodulin-dependent protein kinase IV 
CAMK1                 0.198   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.197   calcium/calmodulin-dependent protein kinase IG [Homo...
DCLK2                 0.196   doublecortin-like kinase 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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