Search of human proteins with 18497304

Search of human proteins with 18497304

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]
         (376 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]              780   0.0  
gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]            181   1e-45
gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...   161   8e-40
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...   161   8e-40
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...   161   8e-40
gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]           158   7e-39
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]            155   4e-38
gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]               144   1e-34
gi|4758540 HNK-1 sulfotransferase [Homo sapiens]                      114   1e-25
gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]            35   0.14 
gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo ...    35   0.14 
gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo ...    35   0.14 
gi|117938768 GNAS complex locus alex [Homo sapiens]                    33   0.55 
gi|153792110 HEG homolog 1 [Homo sapiens]                              32   0.93 
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]          31   1.6  
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]          31   1.6  
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]          31   1.6  
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]          31   1.6  
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]          31   1.6  
gi|31795561 complexin 4 [Homo sapiens]                                 31   2.1  
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ...    30   2.7  
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ...    30   2.7  
gi|239753369 PREDICTED: hypothetical protein LOC375295 [Homo sap...    30   4.6  
gi|239747936 PREDICTED: hypothetical protein LOC375295 [Homo sap...    30   4.6  
gi|239741831 PREDICTED: hypothetical protein [Homo sapiens]            30   4.6  
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate...    30   4.6  

>gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]
          Length = 376

 Score =  780 bits (2013), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMI 60
           MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMI
Sbjct: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMI 60

Query: 61  ERGILAEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGDADLQVRQDVRNRTLRAVCGQP 120
           ERGILAEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGDADLQVRQDVRNRTLRAVCGQP
Sbjct: 61  ERGILAEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGDADLQVRQDVRNRTLRAVCGQP 120

Query: 121 GMPRDPWDLPVGQRRTLLRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDVRL 180
           GMPRDPWDLPVGQRRTLLRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDVRL
Sbjct: 121 GMPRDPWDLPVGQRRTLLRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDVRL 180

Query: 181 KMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQRYGAE 240
           KMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQRYGAE
Sbjct: 181 KMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQRYGAE 240

Query: 241 IVRRYRAGAGPSPAGDDVTFPEFLRYLVDEDPERMNEHWMPVYHLCQPCAVHYDFVGSYE 300
           IVRRYRAGAGPSPAGDDVTFPEFLRYLVDEDPERMNEHWMPVYHLCQPCAVHYDFVGSYE
Sbjct: 241 IVRRYRAGAGPSPAGDDVTFPEFLRYLVDEDPERMNEHWMPVYHLCQPCAVHYDFVGSYE 300

Query: 301 RLEADANQVLEWVRAPPHVRFPARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFS 360
           RLEADANQVLEWVRAPPHVRFPARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFS
Sbjct: 301 RLEADANQVLEWVRAPPHVRFPARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFS 360

Query: 361 LFAYPLPNVTKEACQQ 376
           LFAYPLPNVTKEACQQ
Sbjct: 361 LFAYPLPNVTKEACQQ 376


>gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]
          Length = 352

 Score =  181 bits (458), Expect = 1e-45
 Identities = 103/247 (41%), Positives = 142/247 (57%), Gaps = 16/247 (6%)

Query: 138 LRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAG---VLDSVDVRLKMDHRS-DLVFLAD 193
           L+H++V + +  +YCYVPKVAC+NWKR+M VL G     D +++     H S +L  L  
Sbjct: 107 LKHLVVDEDHELIYCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSANLKTLNQ 166

Query: 194 LRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIRE--YQQRYGAEIVRRYRAGAGP 251
               EI +RL+ Y KFLFVREP ERL+SAYRNKF +     + +RYG +I++R R  A  
Sbjct: 167 YSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQ 226

Query: 252 SPA--GDDVTFPEFLRYLVDEDPER---MNEHWMPVYHLCQPCAVHYDFVGSYERLEADA 306
                GDDV F EF+ YL+D   +R    NEHW  VY LC PC +HYD VG YE LE D+
Sbjct: 227 EALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDS 286

Query: 307 NQVLEWVRAPPHVRFPARQAWYRPASPESLHY--HLCSAPRALLQDVLPKYILDFSLFAY 364
           N VL+      +++FP      R     +  +  ++ S  +  L +V   Y LDF +F Y
Sbjct: 287 NYVLQLAGVGSYLKFPTYAKSTRTTDEMTTEFFQNISSEHQTQLYEV---YKLDFLMFNY 343

Query: 365 PLPNVTK 371
            +P+  K
Sbjct: 344 SVPSYLK 350


>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  161 bits (408), Expect = 8e-40
 Identities = 108/291 (37%), Positives = 143/291 (49%), Gaps = 19/291 (6%)

Query: 89  KPGGLSLRAGDADLQVRQDVRNRTLRAVCGQPGMPRDPWDLPVGQRRTLLRH---ILVSD 145
           +PG  +L      L   Q  R R ++  C +       +     +R    RH   I V D
Sbjct: 136 RPGPGTLDGRWVSLHRSQQERKRVMQEACAK-------YRASSSRRAVTPRHVSRIFVED 188

Query: 146 RYRFLYCYVPKVACSNWKRVMKVLAGVLDSV-DVRLKMDHR-SDLVFLADLRPEEIRYRL 203
           R+R LYC VPK  CSNWKRV+ VLAG+  S  D++    H  S L  L     + I +RL
Sbjct: 189 RHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRL 248

Query: 204 QHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSP--AGDDVTF 260
             Y K LFVREP ERL+SA+R+KF     Y    +G  I+ RYRA A       G  V F
Sbjct: 249 STYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREALRTGSGVRF 308

Query: 261 PEFLRYLVD-EDPERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLEWVRAPPHV 319
           PEF++YL+D   P  M+ HW  V  LC PC + YDFVG +E +E DAN  L  +RAP ++
Sbjct: 309 PEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNL 368

Query: 320 RFPA---RQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
            FP    R +     +    H +         Q     Y +D+ +F Y  P
Sbjct: 369 TFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419


>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  161 bits (408), Expect = 8e-40
 Identities = 108/291 (37%), Positives = 143/291 (49%), Gaps = 19/291 (6%)

Query: 89  KPGGLSLRAGDADLQVRQDVRNRTLRAVCGQPGMPRDPWDLPVGQRRTLLRH---ILVSD 145
           +PG  +L      L   Q  R R ++  C +       +     +R    RH   I V D
Sbjct: 136 RPGPGTLDGRWVSLHRSQQERKRVMQEACAK-------YRASSSRRAVTPRHVSRIFVED 188

Query: 146 RYRFLYCYVPKVACSNWKRVMKVLAGVLDSV-DVRLKMDHR-SDLVFLADLRPEEIRYRL 203
           R+R LYC VPK  CSNWKRV+ VLAG+  S  D++    H  S L  L     + I +RL
Sbjct: 189 RHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRL 248

Query: 204 QHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSP--AGDDVTF 260
             Y K LFVREP ERL+SA+R+KF     Y    +G  I+ RYRA A       G  V F
Sbjct: 249 STYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREALRTGSGVRF 308

Query: 261 PEFLRYLVD-EDPERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLEWVRAPPHV 319
           PEF++YL+D   P  M+ HW  V  LC PC + YDFVG +E +E DAN  L  +RAP ++
Sbjct: 309 PEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNL 368

Query: 320 RFPA---RQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
            FP    R +     +    H +         Q     Y +D+ +F Y  P
Sbjct: 369 TFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419


>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
           sulfotransferase 8 [Homo sapiens]
          Length = 424

 Score =  161 bits (408), Expect = 8e-40
 Identities = 108/291 (37%), Positives = 143/291 (49%), Gaps = 19/291 (6%)

Query: 89  KPGGLSLRAGDADLQVRQDVRNRTLRAVCGQPGMPRDPWDLPVGQRRTLLRH---ILVSD 145
           +PG  +L      L   Q  R R ++  C +       +     +R    RH   I V D
Sbjct: 136 RPGPGTLDGRWVSLHRSQQERKRVMQEACAK-------YRASSSRRAVTPRHVSRIFVED 188

Query: 146 RYRFLYCYVPKVACSNWKRVMKVLAGVLDSV-DVRLKMDHR-SDLVFLADLRPEEIRYRL 203
           R+R LYC VPK  CSNWKRV+ VLAG+  S  D++    H  S L  L     + I +RL
Sbjct: 189 RHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRL 248

Query: 204 QHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSP--AGDDVTF 260
             Y K LFVREP ERL+SA+R+KF     Y    +G  I+ RYRA A       G  V F
Sbjct: 249 STYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREALRTGSGVRF 308

Query: 261 PEFLRYLVD-EDPERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLEWVRAPPHV 319
           PEF++YL+D   P  M+ HW  V  LC PC + YDFVG +E +E DAN  L  +RAP ++
Sbjct: 309 PEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNL 368

Query: 320 RFPA---RQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
            FP    R +     +    H +         Q     Y +D+ +F Y  P
Sbjct: 369 TFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419


>gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]
          Length = 341

 Score =  158 bits (400), Expect = 7e-39
 Identities = 108/249 (43%), Positives = 128/249 (51%), Gaps = 26/249 (10%)

Query: 138 LRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVL--DSVDVRLKMDHR-SDLVFLADL 194
           LRH+LV D +  LYCYVPKVAC+NWKRV+  L+G    D   +  +  H    L  LAD 
Sbjct: 96  LRHVLVDDAHGLLYCYVPKVACTNWKRVLLALSGQARGDPRAISAQEAHAPGRLPSLADF 155

Query: 195 RPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGE--IREYQQRYGAEIVRRYRAGAGPS 252
            P EI  RL+ Y  FLFVREP ERL SAYRNK        +Q+RYGA IV+R R  A P 
Sbjct: 156 SPAEINRRLRAYLAFLFVREPFERLASAYRNKLARPYSAAFQRRYGARIVQRLRPRALPD 215

Query: 253 --PAGDDVTFPEFLRYLVDEDPER---MNEHWMPVYHLCQPCAVHYDFVGSYERLEADAN 307
               G DV F EFL YL+D    R    NEHW   + LC PC + YD VG +E L  DA 
Sbjct: 216 ARARGHDVRFAEFLAYLLDPRTRREEPFNEHWERAHALCHPCRLRYDVVGKFETLAEDAA 275

Query: 308 QVLEWVRAPPHVRFPARQAWYRPASPESLHYHLCSAPRALLQDVLP--------KYILDF 359
            VL    A   + FP       P  P         A R L +D+ P         Y +DF
Sbjct: 276 FVLGLAGA-SDLSFPG------PPRPRGAAASRDLAAR-LFRDISPFYQRRLFDLYKMDF 327

Query: 360 SLFAYPLPN 368
            LF Y  P+
Sbjct: 328 LLFNYSAPS 336


>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
          Length = 414

 Score =  155 bits (393), Expect = 4e-38
 Identities = 124/376 (32%), Positives = 178/376 (47%), Gaps = 57/376 (15%)

Query: 36  GPPLLLPSMLMFAVIVASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGL-- 93
           GPPL  P       + A S +   +++ + A +K   L  P +E      + P PG +  
Sbjct: 46  GPPLPTPGPDRDRELTADSDVDEFLDKFLSAGVKQSDL--PRKETE----QPPAPGSMEE 99

Query: 94  SLRAGD---------ADLQVRQDVRNRTLRAVCGQ-----PGMPRDPWDLPVGQRRTLLR 139
           S+R  D          D   +Q  R   LR  C       P   R   D+P  +    L 
Sbjct: 100 SVRGYDWSPRDARRSPDQGRQQAERRSVLRGFCANSSLAFPTKERAFDDIPNSE----LS 155

Query: 140 HILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVL--------DSVDVRLKMDHRSD--LV 189
           H++V DR+  +YCYVPKVAC+NWKRVM VL+G L        D + +  +  H +   L 
Sbjct: 156 HLIVDDRHGAIYCYVPKVACTNWKRVMIVLSGSLLHRGAPYRDPLRIPREHVHNASAHLT 215

Query: 190 F------LADLRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFG-EIREYQQRYGAEIV 242
           F         L    ++ +L+ Y KFLFVR+P  RL+SA+R+KF  E  E+ +++   ++
Sbjct: 216 FNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYRKFAVPML 275

Query: 243 RRYR-------AGAGPSPAGDDVTFPEFLRYLVDEDPERM---NEHWMPVYHLCQPCAVH 292
           R Y        +      AG  V+F  F++YL+D   E++   NEHW  VY LC PC + 
Sbjct: 276 RLYANHTSLPASAREAFRAGLKVSFANFIQYLLDPHTEKLAPFNEHWRQVYRLCHPCQID 335

Query: 293 YDFVGSYERLEADANQVLEWVRAPPHVRFPARQAWYRPASPESLHYH-LCSAPRALLQDV 351
           YDFVG  E L+ DA Q+L+ ++    +RFP     YR  +  S         P A  Q +
Sbjct: 336 YDFVGKLETLDEDAAQLLQLLQVDRQLRFPPS---YRNRTASSWEEDWFAKIPLAWRQQL 392

Query: 352 LPKYILDFSLFAYPLP 367
              Y  DF LF YP P
Sbjct: 393 YKLYEADFVLFGYPKP 408


>gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]
          Length = 443

 Score =  144 bits (364), Expect = 1e-34
 Identities = 88/239 (36%), Positives = 125/239 (52%), Gaps = 15/239 (6%)

Query: 141 ILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDVRLKMDHRS-----DLVFLADLR 195
           I V D+++ LYC VPK  CSNWKR++ VL G+  S      + H +      L  L    
Sbjct: 206 IYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSA---YNISHNAVHYGKHLKKLDSFD 262

Query: 196 PEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSPA 254
            + I  RL  Y K +FVR+P+ERL+SA+R+KF     Y    +G  I+++YR  A     
Sbjct: 263 LKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFGKAIIKKYRPNACEEAL 322

Query: 255 --GDDVTFPEFLRYLVDED-PERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLE 311
             G  V F EF+ YL+D   P  M+ HW  V  LC PC ++YDFVG +E LE DAN  L+
Sbjct: 323 INGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQ 382

Query: 312 WVRAPPHVRFP---ARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
            + AP  ++FP    R +     + + +  +L    R   Q +   Y LD+ +F Y  P
Sbjct: 383 MIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441


>gi|4758540 HNK-1 sulfotransferase [Homo sapiens]
          Length = 356

 Score =  114 bits (286), Expect = 1e-25
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 18/247 (7%)

Query: 137 LLRHILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDV---RLKMDH-RSDLVFLA 192
           +L  I V D+++ L+C  PKV  + WK+V+ VL G   S++     +  DH ++ L  L+
Sbjct: 109 VLDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEKNGLPRLS 168

Query: 193 DLRPEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQRYGAE----IVRRYRAG 248
                EI+ RL+ YFKF  VR+P ERL+SA+++KF     ++  Y  E    I+R+YR  
Sbjct: 169 SFSDAEIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGIIRKYRRN 228

Query: 249 AGPSPAGDDVTFPEFLRYLVDEDPERMN-------EHWMPVYHLCQPCAVHYDFVGSYER 301
              +     + F +F+RYL D +   ++        HW+    LC PC + Y  +G +E 
Sbjct: 229 RTETRG---IQFEDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIMYSVIGHHET 285

Query: 302 LEADANQVLEWVRAPPHVRFPARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSL 361
           LE DA  +L+       V +P         +   + ++     +  ++ +  ++  DF L
Sbjct: 286 LEDDAPYILKEAGIDHLVSYPTIPPGITVYNRTKVEHYFLGISKRDIRRLYARFEGDFKL 345

Query: 362 FAYPLPN 368
           F Y  P+
Sbjct: 346 FGYQKPD 352


>gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 18/94 (19%)

Query: 7   TPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMIERGIL- 65
           T  AA +G  P G A   A  G +RAG G P +LLP          +  LLL  ER    
Sbjct: 130 TASAARSGV-PAGSA--DAVPGISRAGPGSPSMLLP----------AGSLLLTAERSFTW 176

Query: 66  AEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGD 99
              +    +PPG+    W G AP PG  +L   D
Sbjct: 177 GGRRGTEKNPPGK----WTGLAPGPGAAALGPSD 206


>gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo
           sapiens]
          Length = 217

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 18/94 (19%)

Query: 7   TPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMIERGIL- 65
           T  AA +G  P G A   A  G +RAG G P +LLP          +  LLL  ER    
Sbjct: 130 TASAARSGV-PAGSA--DAVPGISRAGPGSPSMLLP----------AGSLLLTAERSFTW 176

Query: 66  AEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGD 99
              +    +PPG+    W G AP PG  +L   D
Sbjct: 177 GGRRGTEKNPPGK----WTGLAPGPGAAALGPSD 206


>gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo
           sapiens]
          Length = 217

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 18/94 (19%)

Query: 7   TPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMIERGIL- 65
           T  AA +G  P G A   A  G +RAG G P +LLP          +  LLL  ER    
Sbjct: 130 TASAARSGV-PAGSA--DAVPGISRAGPGSPSMLLP----------AGSLLLTAERSFTW 176

Query: 66  AEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGD 99
              +    +PPG+    W G AP PG  +L   D
Sbjct: 177 GGRRGTEKNPPGK----WTGLAPGPGAAALGPSD 206


>gi|117938768 GNAS complex locus alex [Homo sapiens]
          Length = 626

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 39/127 (30%), Positives = 47/127 (37%), Gaps = 29/127 (22%)

Query: 4   RPLTPLAAPNGAEPL--------GRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSG 55
           RPLTP   P    PL        GR LR  P  R         LL P   M   +  + G
Sbjct: 383 RPLTPQPIPTPGRPLTPQPIQMPGRPLRLPPPLR---------LLRPGQPMSPQLRQTQG 433

Query: 56  LLLMIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGLSLRAGDADLQVRQDVRNRTLRA 115
           L L           P PL PPG+  +A R   P P G   R+       R  +  R LR 
Sbjct: 434 LPL-----------PQPLLPPGQPKSAGRPLQPLPPGPDARSISDPPAPRSRLPIRLLRG 482

Query: 116 VCGQ-PG 121
           +  + PG
Sbjct: 483 LLARLPG 489


>gi|153792110 HEG homolog 1 [Homo sapiens]
          Length = 1381

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 36/112 (32%), Positives = 44/112 (39%), Gaps = 33/112 (29%)

Query: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMI 60
           + P  L P AAP   +P        P   AR  L   PL            A +GL L +
Sbjct: 17  LLPLLLLPPAAPGTRDP--------PPSPARRALSLAPL------------AGAGLELQL 56

Query: 61  ERGILAEMKPLPLHPPGREGTAWRG---KAPKPG--------GLSLRAGDAD 101
           ER    E +P P  P  R G A  G   +AP+PG        G + R G AD
Sbjct: 57  ER--RPEREPPPTPPRERRGPATPGPSYRAPEPGAATQRGPSGRAPRGGSAD 106


>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 7   TPLAAPNGAEPLGRALRRAP------LGRARAGLGGPPLLLPSMLMFA--VIVASSGLLL 58
           TP A P       RA+   P        RAR  +   P  L     +A   I  + G L 
Sbjct: 181 TPGALPGDRSGAPRAIAPTPGAMLSGRSRARRAIAPTPSALRGYRSWAHRAIAPTPGCLY 240

Query: 59  MIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGL------SLRAGDADLQVRQDVRNRT 112
                    + P      G    A R  APKPG L      + RA D  L  R+  R+R 
Sbjct: 241 SDRSRAHRAIAPARGTKHGGRSWACRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRA 300

Query: 113 LRAVCGQPG 121
            RA+   PG
Sbjct: 301 HRAIAPTPG 309


>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 7   TPLAAPNGAEPLGRALRRAP------LGRARAGLGGPPLLLPSMLMFA--VIVASSGLLL 58
           TP A P       RA+   P        RAR  +   P  L     +A   I  + G L 
Sbjct: 181 TPGALPGDRSGAPRAIAPTPGAMLSGRSRARRAIAPTPSALRGYRSWAHRAIAPTPGCLY 240

Query: 59  MIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGL------SLRAGDADLQVRQDVRNRT 112
                    + P      G    A R  APKPG L      + RA D  L  R+  R+R 
Sbjct: 241 SDRSRAHRAIAPARGTKHGGRSWACRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRA 300

Query: 113 LRAVCGQPG 121
            RA+   PG
Sbjct: 301 HRAIAPTPG 309


>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2028

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 7   TPLAAPNGAEPLGRALRRAP------LGRARAGLGGPPLLLPSMLMFA--VIVASSGLLL 58
           TP A P       RA+   P        RAR  +   P  L     +A   I  + G L 
Sbjct: 181 TPGALPGDRSGAPRAIAPTPGAMLSGRSRARRAIAPTPSALRGYRSWAHRAIAPTPGCLY 240

Query: 59  MIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGL------SLRAGDADLQVRQDVRNRT 112
                    + P      G    A R  APKPG L      + RA D  L  R+  R+R 
Sbjct: 241 SDRSRAHRAIAPARGTKHGGRSWACRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRA 300

Query: 113 LRAVCGQPG 121
            RA+   PG
Sbjct: 301 HRAIAPTPG 309


>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1934

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 7   TPLAAPNGAEPLGRALRRAP------LGRARAGLGGPPLLLPSMLMFA--VIVASSGLLL 58
           TP A P       RA+   P        RAR  +   P  L     +A   I  + G L 
Sbjct: 181 TPGALPGDRSGAPRAIAPTPGAMLSGRSRARRAIAPTPSALRGYRSWAHRAIAPTPGCLY 240

Query: 59  MIERGILAEMKPLPLHPPGREGTAWRGKAPKPGGL------SLRAGDADLQVRQDVRNRT 112
                    + P      G    A R  APKPG L      + RA D  L  R+  R+R 
Sbjct: 241 SDRSRAHRAIAPARGTKHGGRSWACRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRA 300

Query: 113 LRAVCGQPG 121
            RA+   PG
Sbjct: 301 HRAIAPTPG 309


>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
          Length = 1062

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 13/97 (13%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRA---RAGLGGP---------PLLLPSMLMFAVI 50
          P+PL   + P    P  +A+ R P G       GL GP         P    S  +  V 
Sbjct: 4  PQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVA 63

Query: 51 VASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKA 87
           A SGL    E GILA   P P     R G A  G A
Sbjct: 64 AAGSGLRRGAE-GILAPQPPPPQQHQERPGAAAIGSA 99


>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
          Length = 1044

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 13/97 (13%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRA---RAGLGGP---------PLLLPSMLMFAVI 50
          P+PL   + P    P  +A+ R P G       GL GP         P    S  +  V 
Sbjct: 4  PQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVA 63

Query: 51 VASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKA 87
           A SGL    E GILA   P P     R G A  G A
Sbjct: 64 AAGSGLRRGAE-GILAPQPPPPQQHQERPGAAAIGSA 99


>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
          Length = 1097

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 13/97 (13%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRA---RAGLGGP---------PLLLPSMLMFAVI 50
          P+PL   + P    P  +A+ R P G       GL GP         P    S  +  V 
Sbjct: 4  PQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVA 63

Query: 51 VASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKA 87
           A SGL    E GILA   P P     R G A  G A
Sbjct: 64 AAGSGLRRGAE-GILAPQPPPPQQHQERPGAAAIGSA 99


>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
          Length = 1075

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 13/97 (13%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRA---RAGLGGP---------PLLLPSMLMFAVI 50
          P+PL   + P    P  +A+ R P G       GL GP         P    S  +  V 
Sbjct: 4  PQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVA 63

Query: 51 VASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKA 87
           A SGL    E GILA   P P     R G A  G A
Sbjct: 64 AAGSGLRRGAE-GILAPQPPPPQQHQERPGAAAIGSA 99


>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
          Length = 1044

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 13/97 (13%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRA---RAGLGGP---------PLLLPSMLMFAVI 50
          P+PL   + P    P  +A+ R P G       GL GP         P    S  +  V 
Sbjct: 4  PQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVA 63

Query: 51 VASSGLLLMIERGILAEMKPLPLHPPGREGTAWRGKA 87
           A SGL    E GILA   P P     R G A  G A
Sbjct: 64 AAGSGLRRGAE-GILAPQPPPPQQHQERPGAAAIGSA 99


>gi|31795561 complexin 4 [Homo sapiens]
          Length = 160

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/20 (70%), Positives = 15/20 (75%)

Query: 254 AGDDVTFPEFLRYLVDEDPE 273
           AGDDV  PE LR +VDED E
Sbjct: 96  AGDDVDLPEDLRKMVDEDQE 115


>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
           sapiens]
          Length = 261

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 32/85 (37%), Positives = 36/85 (42%), Gaps = 28/85 (32%)

Query: 20  RALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMIERGILAEMKPLPLHPPG-- 77
           R L   P GR R      PL LP MLM                 +L  ++PLP  PPG  
Sbjct: 149 RLLSACPSGRPRPR----PLPLPLMLML----------------MLPTLQPLP--PPGSA 186

Query: 78  ---REGTAWR-GKAPKPGGLSLRAG 98
              R G A R G AP P   S+RAG
Sbjct: 187 RRPRRGRAGRGGAAPAPPTGSMRAG 211


>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
           sapiens]
          Length = 261

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 32/85 (37%), Positives = 36/85 (42%), Gaps = 28/85 (32%)

Query: 20  RALRRAPLGRARAGLGGPPLLLPSMLMFAVIVASSGLLLMIERGILAEMKPLPLHPPG-- 77
           R L   P GR R      PL LP MLM                 +L  ++PLP  PPG  
Sbjct: 149 RLLSACPSGRPRPR----PLPLPLMLML----------------MLPTLQPLP--PPGSA 186

Query: 78  ---REGTAWR-GKAPKPGGLSLRAG 98
              R G A R G AP P   S+RAG
Sbjct: 187 RRPRRGRAGRGGAAPAPPTGSMRAG 211


>gi|239753369 PREDICTED: hypothetical protein LOC375295 [Homo
           sapiens]
          Length = 262

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGP 37
           +FP  L  LA P+GAE  GR        RARAG G P
Sbjct: 131 LFPALLAALARPHGAEVPGRR------ARARAGTGFP 161


>gi|239747936 PREDICTED: hypothetical protein LOC375295 [Homo
           sapiens]
          Length = 262

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGP 37
           +FP  L  LA P+GAE  GR        RARAG G P
Sbjct: 131 LFPALLAALARPHGAEVPGRR------ARARAGTGFP 161


>gi|239741831 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 1   MFPRPLTPLAAPNGAEPLGRALRRAPLGRARAGLGGP 37
           +FP  L  LA P+GAE  GR        RARAG G P
Sbjct: 131 LFPALLAALARPHGAEVPGRR------ARARAGTGFP 161


>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate
          3B [Homo sapiens]
          Length = 1043

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 3  PRPLTPLAAPNGAEPLGRALRRAPLGRARA 32
          P+P   LA   G+  LG  L RAPL RARA
Sbjct: 24 PQPCGVLARLGGSVRLGALLPRAPLARARA 53


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.142    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,255,509
Number of Sequences: 37866
Number of extensions: 909944
Number of successful extensions: 3109
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3056
Number of HSP's gapped (non-prelim): 43
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.