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Search of human proteins with 18250302
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18250302 hypothetical protein LOC128864 [Homo sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18250302 hypothetical protein LOC128864 [Homo sapiens] 315 1e-86
gi|145701005 hypothetical protein LOC375759 [Homo sapiens] 37 0.007
gi|31563338 forkhead box K2 [Homo sapiens] 35 0.019
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 35 0.033
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens] 34 0.056
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens] 34 0.056
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 33 0.073
gi|239756303 PREDICTED: hypothetical protein [Homo sapiens] 33 0.095
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 32 0.16
gi|28269687 zygote arrest 1 [Homo sapiens] 32 0.16
gi|239756393 PREDICTED: hypothetical protein XP_002344913 [Homo ... 32 0.21
gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap... 32 0.28
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 32 0.28
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 32 0.28
gi|61966733 hypothetical protein LOC388199 [Homo sapiens] 32 0.28
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 31 0.36
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 31 0.36
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 31 0.36
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 31 0.36
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 30 0.62
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 30 0.62
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 30 1.1
gi|169203012 PREDICTED: similar to hCG1820409 [Homo sapiens] 30 1.1
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 30 1.1
gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens] 30 1.1
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens] 30 1.1
gi|82546824 forkhead box K1 [Homo sapiens] 30 1.1
gi|13492973 potassium voltage-gated channel delayed-rectifier pr... 30 1.1
>gi|18250302 hypothetical protein LOC128864 [Homo sapiens]
Length = 153
Score = 315 bits (807), Expect = 1e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANA 60
MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANA
Sbjct: 1 MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANA 60
Query: 61 GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR 120
GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR
Sbjct: 61 GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR 120
Query: 121 LLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL 153
LLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL
Sbjct: 121 LLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL 153
>gi|145701005 hypothetical protein LOC375759 [Homo sapiens]
Length = 431
Score = 37.0 bits (84), Expect = 0.007
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 82 GAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAE-E 140
G G G PR+P LL R+ R+ G +L P LLS S APR+ GP E E
Sbjct: 70 GVGVG-RLPPRLPALLTATRRAVRKR---GLLRSLLPPPLLSAGASRESAPRQPGPGERE 125
Query: 141 QPRKR 145
+PR+R
Sbjct: 126 RPRRR 130
>gi|31563338 forkhead box K2 [Homo sapiens]
Length = 660
Score = 35.4 bits (80), Expect = 0.019
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 13/123 (10%)
Query: 25 DKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAG 84
DK W S ++L+ R + +P + +P + RID AS + L A + R G
Sbjct: 299 DKGWQNSIRHNLS----LNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRG 354
Query: 85 EGSEREPRMPVLLLLRRQEARRPEEGGARAALS----WPRLLSRFRSPGKAPREAGPAEE 140
R P P L R P G +A S P LSR SP AP E P
Sbjct: 355 VPCFRTPLGP---LSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSP--APLEPEPGAA 409
Query: 141 QPR 143
QP+
Sbjct: 410 QPK 412
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 34.7 bits (78), Expect = 0.033
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 72 LGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKA 131
+G P AP G + +E + R P L LR Q R P G AR+ L R R
Sbjct: 203 VGVPLAPLGHGGVDWAENKER-PRRLRLRSQRFRPPSPGAARSQLPETARRPRPRPRPAL 261
Query: 132 PREAGPAEEQPRKRCR 147
PR A + +RCR
Sbjct: 262 PRRAREPQPGSGRRCR 277
>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
Length = 590
Score = 33.9 bits (76), Expect = 0.056
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Query: 36 LTRKKPATRIVL-ILPLDKRQPLANAGQRIDYASGAGLGSPAAPRL-RGAGEGSEREPRM 93
L+R + R++L + L RQ L + A G PAAPR R G G +RE R
Sbjct: 155 LSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRK 214
Query: 94 PVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGP 137
P PE G AA + R R +AP E P
Sbjct: 215 P----------EEPENGEPTAAATARRSKRERREEDRAPAEQVP 248
>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
Length = 499
Score = 33.9 bits (76), Expect = 0.056
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Query: 36 LTRKKPATRIVL-ILPLDKRQPLANAGQRIDYASGAGLGSPAAPRL-RGAGEGSEREPRM 93
L+R + R++L + L RQ L + A G PAAPR R G G +RE R
Sbjct: 155 LSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRK 214
Query: 94 PVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGP 137
P PE G AA + R R +AP E P
Sbjct: 215 P----------EEPENGEPTAAATARRSKRERREEDRAPAEQVP 248
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 33.5 bits (75), Expect = 0.073
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 77 APRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGK-APREA 135
AP LRG S++ + +AR PE ++ L LL F P + AP +A
Sbjct: 733 APALRGTRAPSDQG----------KGKARPPEPLSSKPPLPRKPLLQSFTLPHQPAPPDA 782
Query: 136 GPAEEQPRKRCR 147
GP E +PRK R
Sbjct: 783 GPGEREPRKEPR 794
>gi|239756303 PREDICTED: hypothetical protein [Homo sapiens]
Length = 232
Score = 33.1 bits (74), Expect = 0.095
Identities = 29/78 (37%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 70 AGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPG 129
A L P A R G G G R + LLLR Q ARR G RA P G
Sbjct: 120 AELRPPEAART-GGGCGERRRRKAAATLLLRNQNARRRNPGSRRAG---PASRGAMLEKG 175
Query: 130 KAPREAGP----AEEQPR 143
+ RE P AEE R
Sbjct: 176 SSSREDAPPAWEAEEPAR 193
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 32.7 bits (73), Expect = 0.12
Identities = 38/126 (30%), Positives = 47/126 (37%), Gaps = 34/126 (26%)
Query: 50 PLDKRQPLANAGQRIDYASGAGLGSPAA-----PRLRGAGEGSEREPRMPVLLLLRRQEA 104
P+ + AG R Y G G + AA PR AG+ L +
Sbjct: 61 PISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQ-----------CLSEAERP 109
Query: 105 RRPEEGGARA--ALSWPRLLSRFRS--------PGKA--------PREAGPAEEQPRKRC 146
RRPE GGAR+ + P SR RS PG + P A P R R
Sbjct: 110 RRPEPGGARSRPVAASPAASSRARSRPESSPGAPGSSVPALLPSLPPLAAPRPLSARPRL 169
Query: 147 RCPRPQ 152
R P+PQ
Sbjct: 170 RPPQPQ 175
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 32.3 bits (72), Expect = 0.16
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 78 PRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAA-LSWPRLLSRFRSPGKAPREAG 136
PR GS + + V L RQ A P G AR+ LS +L+R PG PRE
Sbjct: 6 PRSGAERAGSCWQDPLAVALSRGRQLAAPPGRGCARSRPLSVVYVLTREPQPGLEPREGT 65
Query: 137 PAEEQP----RKRC-RCPRPQ 152
AE P R+ C + PRP+
Sbjct: 66 EAEPLPLRCLREACAQVPRPR 86
>gi|28269687 zygote arrest 1 [Homo sapiens]
Length = 424
Score = 32.3 bits (72), Expect = 0.16
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 60 AGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWP 119
AG++ AS G P A RL+G EG + P RR ++ E A SW
Sbjct: 201 AGEQRSGASDGERGPPPA-RLQGPEEGEVWTKKAP-----RRPQSDDDGEAQAAVRASWE 254
Query: 120 RLLSRFRSPGKAPREAGPAEEQPRKRCRCP 149
+ P PREA E PR R P
Sbjct: 255 QPAD---GPELPPREAQEGEAAPRSALRSP 281
>gi|239756393 PREDICTED: hypothetical protein XP_002344913 [Homo
sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 0.21
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 67 ASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFR 126
A GA L S A R G GS EPR EA R +E R + LS R
Sbjct: 363 AGGAALTSLRAVPAREGGAGSRSEPR----------EAARGQEPPLRHCRACLPQLSAMR 412
Query: 127 SPGKAPREAG 136
SPG+ E G
Sbjct: 413 SPGQGRPEGG 422
Score = 27.3 bits (59), Expect = 5.2
Identities = 42/156 (26%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 13 PKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLA-----NAGQRIDYA 67
P + P + ++ L L+ + PA LP R +A +AG+R
Sbjct: 259 PFSQEVDDPHALSSPFFPKQLGSLSLELPARLPTRCLPSPPRSLVAPSESGSAGKR---- 314
Query: 68 SGAGLGSPAAPR----LRGAGEGSEREPRM-PVLLLLRR-QEARRPEEGGARAALSWPRL 121
G A PR GA G + P+ LRR A +GGA A
Sbjct: 315 --RGTNGGATPRKSCDASGAWGGKAKAHGWAPLTAFLRRLHSALVGVKGGAGGAALTSLR 372
Query: 122 LSRFRSPGKA----PREAGPAEEQPRKRCRCPRPQL 153
R G PREA +E P + CR PQL
Sbjct: 373 AVPAREGGAGSRSEPREAARGQEPPLRHCRACLPQL 408
>gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 0.28
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 38 RKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLL 97
RK PA L QPLANA + G GL P +R P
Sbjct: 81 RKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGP 140
Query: 98 LLRRQEARRPEEGGARAALSWPRLLSRF-RSPGKAPREAGP 137
+ + P++G P SR+ ++PG+ PR P
Sbjct: 141 EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 31.6 bits (70), Expect = 0.28
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 36 LTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPV 95
L+ P + + L+ P + P A AG + G G G +A +GA G E+
Sbjct: 149 LSTAPPPSSLRLLPPTPRPFPPAPAGGK-----GEGGGKESAVLWKGAEGGGEKG----- 198
Query: 96 LLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRC 146
R A P AR A L R R PR A P+ PR RC
Sbjct: 199 ----NRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRC 245
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 31.6 bits (70), Expect = 0.28
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 36 LTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPV 95
L+ P + + L+ P + P A AG + G G G +A +GA G E+
Sbjct: 149 LSTAPPPSSLRLLPPTPRPFPPAPAGGK-----GEGGGKESAVLWKGAEGGGEKG----- 198
Query: 96 LLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRC 146
R A P AR A L R R PR A P+ PR RC
Sbjct: 199 ----NRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRC 245
>gi|61966733 hypothetical protein LOC388199 [Homo sapiens]
Length = 402
Score = 31.6 bits (70), Expect = 0.28
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 38 RKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLL 97
RK PA L QPLANA + G GL P +R P
Sbjct: 81 RKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGP 140
Query: 98 LLRRQEARRPEEGGARAALSWPRLLSRF-RSPGKAPREAGP 137
+ + P++G P SR+ ++PG+ PR P
Sbjct: 141 EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 31.2 bits (69), Expect = 0.36
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 72 LGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKA 131
LGS + PRL GS R P L R+ RR E A L PR LSR A
Sbjct: 191 LGSASPPRLAAPLAGS----RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGA 246
Query: 132 PREAGPAEEQPRKR 145
R G E + R R
Sbjct: 247 RRRRGGEERRVRGR 260
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 31.2 bits (69), Expect = 0.36
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 72 LGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKA 131
LGS + PRL GS R P L R+ RR E A L PR LSR A
Sbjct: 285 LGSASPPRLAAPLAGS----RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGA 340
Query: 132 PREAGPAEEQPRKR 145
R G E + R R
Sbjct: 341 RRRRGGEERRVRGR 354
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 31.2 bits (69), Expect = 0.36
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 72 LGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKA 131
LGS + PRL GS R P L R+ RR E A L PR LSR A
Sbjct: 285 LGSASPPRLAAPLAGS----RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGA 340
Query: 132 PREAGPAEEQPRKR 145
R G E + R R
Sbjct: 341 RRRRGGEERRVRGR 354
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 31.2 bits (69), Expect = 0.36
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 67 ASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAAL--------SW 118
A AG +P +PR GE +++PR RR+ + PEE A AA
Sbjct: 96 APSAGGAAPCSPRGARRGEPPQQQPR-------RRRREKEPEEEPAGAAARAADAACNGL 148
Query: 119 PRLLSRFRSPGKAPREAGPAEEQP 142
P SR R+PGK G ++P
Sbjct: 149 PGSDSR-RAPGKGGGSKGSPGQRP 171
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 30.4 bits (67), Expect = 0.62
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 30/111 (27%)
Query: 61 GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR 120
G +D GAG PRLR G G+ + L + R EEG A P
Sbjct: 24 GAVVDILQGAGGPEQRGPRLRLGGSGTRQ--------LQQAAATREGEEGEAGGLSDQPG 75
Query: 121 LL-------------SRFRSPGKAPR-----EAGPA----EEQPRKRCRCP 149
++ +RFR+ +A R E GPA +++ R R R P
Sbjct: 76 VMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQRARARAP 126
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 30.4 bits (67), Expect = 0.62
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 21/93 (22%)
Query: 54 RQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGAR 113
R P AG+R A G G +PA R R +G R P + + A RP GGA
Sbjct: 121 RTPAVRAGRRA--ADGPGEEAPAPGRARFSGLSQPRGP--------QPRAAVRPRRGGAL 170
Query: 114 AALSWPRLLSRFRSPGKAPREAGPAEEQPRKRC 146
R G P E Q +RC
Sbjct: 171 P-----------RGTGAVPERGPGTEPQRGRRC 192
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 29.6 bits (65), Expect = 1.1
Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 31/98 (31%)
Query: 73 GSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFR------ 126
GSPA+P G G R+ L +LR R E GAR LS +L+SR R
Sbjct: 131 GSPASP---GPGR------RLCSLDVLR---GVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 127 ----------SPGKAPREA---GPAEEQPRKRCRCPRP 151
SP ++PR A GPA + P PRP
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRP 216
>gi|169203012 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 339
Score = 29.6 bits (65), Expect = 1.1
Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 26/114 (22%)
Query: 48 ILPLDKRQPLANAGQRIDYASGAGLGSPA--------APRLRGAGEGSEREPRMPVLLLL 99
+L ++ P N G G G G P+ + RG G E + + P L+L
Sbjct: 46 VLEKEEEGPSLNVG-------GGGGGKPSRSLQEPNFSAARRGGGGEDEEKAQQPTALIL 98
Query: 100 RRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCP-RPQ 152
R P GG + G REAG E P R P RP+
Sbjct: 99 GSLPPRLPRRGGRGDS----------AGGGGRDREAGRGEANPAHSARSPERPR 142
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 29.6 bits (65), Expect = 1.1
Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 31/98 (31%)
Query: 73 GSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFR------ 126
GSPA+P G G R+ L +LR R E GAR LS +L+SR R
Sbjct: 131 GSPASP---GPGR------RLCSLDVLR---GVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 127 ----------SPGKAPREA---GPAEEQPRKRCRCPRP 151
SP ++PR A GPA + P PRP
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRP 216
>gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 29.6 bits (65), Expect = 1.1
Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 26/114 (22%)
Query: 48 ILPLDKRQPLANAGQRIDYASGAGLGSPA--------APRLRGAGEGSEREPRMPVLLLL 99
+L ++ P N G G G G P+ + RG G E + + P L+L
Sbjct: 46 VLEKEEEGPSLNVG-------GGGGGKPSRSLQEPNFSAARRGGGGEDEEKAQQPTALIL 98
Query: 100 RRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCP-RPQ 152
R P GG + G REAG E P R P RP+
Sbjct: 99 GSLPPRLPRRGGRGDS----------AGGGGRDREAGRGEANPAHSARSPERPR 142
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 29.6 bits (65), Expect = 1.1
Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 31/98 (31%)
Query: 73 GSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFR------ 126
GSPA+P G G R+ L +LR R E GAR LS +L+SR R
Sbjct: 131 GSPASP---GPGR------RLCSLDVLR---GVRLELAGARRRLSEGKLVSRPRALLHGL 178
Query: 127 ----------SPGKAPREA---GPAEEQPRKRCRCPRP 151
SP ++PR A GPA + P PRP
Sbjct: 179 RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRP 216
>gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens]
Length = 578
Score = 29.6 bits (65), Expect = 1.1
Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 26/114 (22%)
Query: 48 ILPLDKRQPLANAGQRIDYASGAGLGSPA--------APRLRGAGEGSEREPRMPVLLLL 99
+L ++ P N G G G G P+ + RG G E + + P L+L
Sbjct: 46 VLEKEEEGPSLNVG-------GGGGGKPSRSLQEPNFSAARRGGGGEDEEKAQQPTALIL 98
Query: 100 RRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCP-RPQ 152
R P GG + G REAG E P R P RP+
Sbjct: 99 GSLPPRLPRRGGRGDS----------AGGGGRDREAGRGEANPAHSARSPERPR 142
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 29.6 bits (65), Expect = 1.1
Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Query: 25 DKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAG 84
DK W S ++L+ R + +P + +P + RID AS A L A + R G
Sbjct: 346 DKGWQNSIRHNLS----LNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRG 401
Query: 85 EGSEREPRMPVLLLLRRQEARRPEEGGARA----ALSWPRLLSRFRSP 128
R P P L R P G + L P LSR SP
Sbjct: 402 VSCFRTPFGP---LSSRSAPASPTHPGLMSPRSGGLQTPECLSREGSP 446
>gi|13492973 potassium voltage-gated channel delayed-rectifier
protein S1 [Homo sapiens]
Length = 526
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 100 RRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRC 146
R EA R GG R LS R L+RF +A +EEQ R+ C
Sbjct: 47 RSDEALRVNVGGVRRQLS-ARALARFPGTRLGRLQAAASEEQARRLC 92
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,545,855
Number of Sequences: 37866
Number of extensions: 404491
Number of successful extensions: 1687
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 1646
Number of HSP's gapped (non-prelim): 149
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.