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Search of human proteins with 18105054
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18105054 kinesin-associated protein 3 [Homo sapiens]
(792 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18105054 kinesin-associated protein 3 [Homo sapiens] 1586 0.0
gi|148762963 armadillo repeat containing 2 [Homo sapiens] 48 4e-05
gi|21735548 centrosomal protein 2 [Homo sapiens] 35 0.27
gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens] 34 0.46
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 34 0.61
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 33 0.79
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens] 33 1.0
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 33 1.0
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 33 1.0
gi|71061468 centromere protein E [Homo sapiens] 33 1.0
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 33 1.0
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 33 1.0
gi|193290160 CTAGE family, member 4 [Homo sapiens] 33 1.4
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 1.4
gi|163914373 solute carrier family 8 (sodium/calcium exchanger),... 33 1.4
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 32 1.8
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 32 1.8
gi|146262005 CTAGE family, member 6 [Homo sapiens] 32 1.8
gi|31657114 armadillo repeat containing 4 [Homo sapiens] 32 1.8
gi|56847634 hypothetical protein LOC441294 [Homo sapiens] 32 1.8
gi|156713444 proteasome alpha 4 subunit isoform 2 [Homo sapiens] 32 2.3
gi|156713442 proteasome alpha 4 subunit isoform 1 [Homo sapiens] 32 2.3
gi|4506185 proteasome alpha 4 subunit isoform 1 [Homo sapiens] 32 2.3
gi|195972892 fatty acid amide hydrolase 2 [Homo sapiens] 32 2.3
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 32 3.0
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 32 3.0
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 32 3.0
gi|145553976 zinc finger, CW type with coiled-coil domain 2 isof... 31 3.9
gi|145553971 zinc finger, CW type with coiled-coil domain 2 isof... 31 3.9
gi|157266317 ataxia telangiectasia and Rad3 related protein [Hom... 31 5.1
>gi|18105054 kinesin-associated protein 3 [Homo sapiens]
Length = 792
Score = 1586 bits (4107), Expect = 0.0
Identities = 792/792 (100%), Positives = 792/792 (100%)
Query: 1 MQGEDARYLKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKS 60
MQGEDARYLKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKS
Sbjct: 1 MQGEDARYLKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKS 60
Query: 61 LNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPP 120
LNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPP
Sbjct: 61 LNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPP 120
Query: 121 FEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLNETALGALA 180
FEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLNETALGALA
Sbjct: 121 FEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLNETALGALA 180
Query: 181 RVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEE 240
RVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEE
Sbjct: 181 RVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEE 240
Query: 241 LSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMR 300
LSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMR
Sbjct: 241 LSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMR 300
Query: 301 NKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDL 360
NKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDL
Sbjct: 301 NKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDL 360
Query: 361 LNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMF 420
LNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMF
Sbjct: 361 LNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMF 420
Query: 421 AYTDCIPQLMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKD 480
AYTDCIPQLMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKD
Sbjct: 421 AYTDCIPQLMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKD 480
Query: 481 PLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWEL 540
PLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWEL
Sbjct: 481 PLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWEL 540
Query: 541 VLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNA 600
VLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNA
Sbjct: 541 VLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNA 600
Query: 601 QQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDII 660
QQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDII
Sbjct: 601 QQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDII 660
Query: 661 AEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDL 720
AEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDL
Sbjct: 661 AEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDL 720
Query: 721 FYNSDGLIASEGAISPDFFNDYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGF 780
FYNSDGLIASEGAISPDFFNDYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGF
Sbjct: 721 FYNSDGLIASEGAISPDFFNDYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGF 780
Query: 781 RPDEPYYYGYGS 792
RPDEPYYYGYGS
Sbjct: 781 RPDEPYYYGYGS 792
>gi|148762963 armadillo repeat containing 2 [Homo sapiens]
Length = 867
Score = 47.8 bits (112), Expect = 4e-05
Identities = 92/444 (20%), Positives = 177/444 (39%), Gaps = 70/444 (15%)
Query: 263 KTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKNIVHMLVKALDRD----NFE 318
K K L V ++ LL V L+ ++ + + + ++N +I+ L++ L + N E
Sbjct: 334 KLAKIILALKVSRKNLLNVCK-LIFKISRNEKNDSLIQNDSILESLLEVLRSEDLQTNME 392
Query: 319 LLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDL----------------LN 362
+ + +K +S + N+M+ VE L+ +I +E++ +
Sbjct: 393 AFLYCMGSIKFISGNLGFLNEMISKGAVEILINLIKQINENIKKCGTFLPNSGHLLVQVT 452
Query: 363 ITLRLLLNLSFDTGLRNKMVQVGLLPKLTALL-----GNDNYKQIAMCVLYHISMDDRFK 417
TLR L++ S +R+K + + LP+L + D IA S D
Sbjct: 453 ATLRNLVDSSL---VRSKFLNISALPQLCTAMEQYKGDKDVCTNIARIFSKLTSYRDCCT 509
Query: 418 SMFAYTDCIPQLMKMLFECSDERIDLELISFCI-NLAA--NKRNVQLICEGNGLKMLM-- 472
++ +Y+ C + ++ + ++ + + F + NL A N+ Q E ++ L+
Sbjct: 510 ALASYSRCYALFLNLINKYQKKQDLVVRVVFILGNLTAKNNQAREQFSKEKGSIQTLLSL 569
Query: 473 ------------------------KRALKFKDPLLMKMIR---NISQHD--GPTKNLFID 503
+R + +L+K+ R NI+ H GP
Sbjct: 570 FQTFHQLDLHSQKPVGQRGEQHRAQRPPSEAEDVLIKLTRVLANIAIHPGVGPVLAANPG 629
Query: 504 YVGDLAAQI---SNDEEEEFVIECLGTLANLTIPDLDWELVLKEYKLVPYLKDKLKPGAA 560
VG L + S D+ EE VI T+ NL+ + ++ + + L KL
Sbjct: 630 IVGLLLTTLEYKSLDDCEELVINATATINNLSYYQVKNSIIQDKKLYIAELLLKLLVSNN 689
Query: 561 EDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDEFVCQIIYVFYQMVF 620
D +LE V + G +S D + ++ + ++ LL+AQ +D +C +
Sbjct: 690 MDG-ILEAVRVFGNLSQDHDVCDFIVQNNVHRFMMALLDAQHQD---ICFSACGVLLNLT 745
Query: 621 HQATRDVIIKETQAPAYLIDLMHD 644
+ VI+KE L+D + D
Sbjct: 746 VDKDKRVILKEGGGIKKLVDCLRD 769
Score = 32.7 bits (73), Expect = 1.4
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 380 KMVQVGL------LPKLTALLGNDNYKQIAMC-VLYHISMDDRFKSMFAYTDCIPQLMKM 432
K+V VG L K+ L + +C +++ IS +++ S+ + L+++
Sbjct: 322 KLVDVGSDSLSLKLAKIILALKVSRKNLLNVCKLIFKISRNEKNDSLIQNDSILESLLEV 381
Query: 433 LFECSDERIDLELISFCINLAANKRNVQLICEGNGL--KMLMKRALKFKDPLLMKMIRNI 490
L D + ++E +C+ +++ I G +M+ K A++ L+ ++ NI
Sbjct: 382 L-RSEDLQTNMEAFLYCMG------SIKFISGNLGFLNEMISKGAVEILINLIKQINENI 434
Query: 491 SQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWELVLKEY---KL 547
+ F+ G L Q++ TL NL +D LV ++
Sbjct: 435 KKC-----GTFLPNSGHLLVQVT------------ATLRNL----VDSSLVRSKFLNISA 473
Query: 548 VPYLKDKLKPGAAEDDLVLEVV-IMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDE 606
+P L ++ + D+ + I S D C AL + S + L+N Q+ +
Sbjct: 474 LPQLCTAMEQYKGDKDVCTNIARIFSKLTSYRDCCTALASYSRCYALFLNLINKYQKKQD 533
Query: 607 FVCQIIYV 614
V +++++
Sbjct: 534 LVVRVVFI 541
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 35.0 bits (79), Expect = 0.27
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 32 EVEATILGEMGDPMLGERKECQKI------IRLKSLNANTDITSLARKVVEECKLIHPSK 85
EVE T+ G++ + L +++E QK + LK N D+ + +E+C+ +
Sbjct: 1436 EVE-TLRGQIQE--LEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSV---- 1488
Query: 86 LNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYED 145
+E L +Q R L+ + ++ + + KD + ++ + D+ IE
Sbjct: 1489 ---LEHLPMAVQEREQKLTVQREQIRELE-KDRETQRNVLEHQLLELEKKDQMIESQRGQ 1544
Query: 146 IPDK----VRGSALILQLARNPDNLE--ELLLNE------TALGALARVLREDWKQSVEL 193
+ D V L L+L N +E + L+ E T AL + + ++S EL
Sbjct: 1545 VQDLKKQLVTLECLALELEENHHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQEL 1604
Query: 194 ATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEELSKKKKAVDEDPE 253
+ SQ H L +H + A + D E+K EEL ++K+ + +D E
Sbjct: 1605 Q----------AQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLE 1654
Query: 254 NQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKNI 304
R+D E +K + + V ++Q R L +L E + L+ R + +
Sbjct: 1655 ----RRDQELMLQK-ERIQVLEDQRTRQTKILEEDL-EQIKLSLRERGREL 1699
Score = 30.8 bits (68), Expect = 5.1
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Query: 221 ALCMNIIDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLR 280
ALC ++ E +R L + L +K+ D + + LR+D + K Q + L+
Sbjct: 915 ALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQ 974
Query: 281 VALYLLLNLAEDTRTELKMRNKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDM 340
A L A R +L + +L +D L V LK + ++ +
Sbjct: 975 EAQRELKEAARQHRDDLAALQEESSSLLQDKMD------LQKQVEDLKSQLVAQDDSQRL 1028
Query: 341 VEMDIVEKL 349
VE ++ EKL
Sbjct: 1029 VEQEVQEKL 1037
>gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens]
Length = 1363
Score = 34.3 bits (77), Expect = 0.46
Identities = 38/171 (22%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 308 LVKALDRDNFELLILVVSFLKKLSIFMENK-NDMVEMDIVEKLVKMIPCEHEDLLNITLR 366
LV+ L ++++ ++ V L+ + + + +++ + L+ ++ L T+
Sbjct: 634 LVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVG 693
Query: 367 LLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMC--VLYHISMDDRFKSMFAYTD 424
LL N+S + +V+ G +P L LL D + + C +LY I+ + K + A +
Sbjct: 694 LLSNISTHKSAVHALVEAGGIPSLINLLVCDEPEVHSRCAVILYDIAQCEN-KDVIAKYN 752
Query: 425 CIPQLMKMLFECSDERIDLELISFCINL--AANKRNVQLICEGNGLKMLMK 473
IP L+ +L + E + + +++ CI + N+ N + + E GL L++
Sbjct: 753 GIPSLINLL-NLNIENVLVNVMN-CIRVLCIGNENNQRAVREHKGLPYLIR 801
Score = 31.6 bits (70), Expect = 3.0
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 535 DLDWELVLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPAL 594
D W +L + +P L + LK +++ L + V ++ +S S L ++G IP+L
Sbjct: 661 DQYWRCIL-DAGTIPALINLLK--SSKIKLQCKTVGLLSNISTHKSAVHALVEAGGIPSL 717
Query: 595 IELLNAQQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCD 654
I LL + + C +I Y + +DVI K P+ LI+L+ N I V
Sbjct: 718 INLLVCDEPEVHSRCAVI--LYD-IAQCENKDVIAKYNGIPS-LINLL---NLNIENVLV 770
Query: 655 NTLDII 660
N ++ I
Sbjct: 771 NVMNCI 776
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 33.9 bits (76), Expect = 0.61
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 224 MNIIDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQG 270
++I D K E+W+ +KK+ D E+ R+DYEK K+Y+G
Sbjct: 572 ISITDLSKKAGEIWKGMSKEKKEEWDRKAEDA--RRDYEKAMKEYEG 616
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 33.5 bits (75), Expect = 0.79
Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 52/306 (16%)
Query: 99 RRDSLSGKEKKEKSS--KPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALI 156
RR S K+KKE K +D + + DE N+ DEY + E+ D+
Sbjct: 829 RRKSGDDKDKKEDRDERKKEDKRKDDSKDDDETEEDNNQDEYDPMEAEEAEDE------- 881
Query: 157 LQLARNPDNLEELLLNETALGALARVLRE-----DWKQSVELATNIIYIFFCFSSFSQFH 211
D EE + + R +E K+ ++ T + F F Q H
Sbjct: 882 -----EDDRDEEEMTKRDDKRDINRYCKERPSKDKEKEKTQMITINRDLLMAFVYFDQSH 936
Query: 212 -GLITH-------YKIG-----ALCMNIIDHELKRHELWQEELSKKKKAVDEDPENQTLR 258
G + Y +G A +++ + R + +L+ K + E+++L+
Sbjct: 937 CGYLLEKDLEEILYTLGLHLSRAQVKKLLNKVVLRESCFYRKLTDTSKDEENHEESESLQ 996
Query: 259 KDY---------------EKTFKKYQGLVVKQEQLLRV-ALYLLLNLAEDTRTELKMRNK 302
+D K ++ GL+V ++ V +L L +E R E++ +
Sbjct: 997 EDMLGNRLLLPTPTVKQESKDVEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQK-- 1054
Query: 303 NIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDLLN 362
+ +L + D D +L L S E K D+ ++ K+ + + + E+ +N
Sbjct: 1055 --LQLLEEKTDEDEKTILNLENSNKSLSGELREVKKDLSQLQENLKISENMNLQFENQMN 1112
Query: 363 ITLRLL 368
T+R L
Sbjct: 1113 KTIRNL 1118
>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
Length = 4471
Score = 33.1 bits (74), Expect = 1.0
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 65/347 (18%)
Query: 63 ANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPPFE 122
ANT + V+ KL++ S E LY L + L+ +K P E
Sbjct: 1055 ANTVQENAKSWVISLGKLLNESAKEE----LYNLHEEMEHLAKNLRKI-------PNTLE 1103
Query: 123 GME--IDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNP-----DNLEELLLN--- 172
++ + +A I +EL Y D+ ++ R A+ + D +E + N
Sbjct: 1104 DLKFVLATIAEIRSKSLVMELRYRDVQERYRTMAMYNLFPPDAEKELVDKIESIWSNLFN 1163
Query: 173 -----ETALGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLI-THYKIGALCMNI 226
E ALG + R E + + + + F +S+ G + G + +
Sbjct: 1164 DSVNVEHALGDIKRTFTELTRGEI-MNYRVQIEEFAKRFYSEGPGSVGDDLDKGVELLGV 1222
Query: 227 IDHELKRHELWQEELSKKKKAVDED----PENQTLRKD---YEKTFKKYQGLVVKQEQLL 279
+ EL RHE ++EL+ +K D PE ++K+ ++ Y+GL V +E+
Sbjct: 1223 YERELARHEKSRQELANAEKLFDLPITMYPELLKVQKEMSGLRMIYELYEGLKVAKEEWS 1282
Query: 280 RVALYLLLN---LAEDTRTELK--------MRNKNIVHML---VKALDRDNFELLILVVS 325
+ L++ LN L E L+ +R ++ + L +KA +D+ LL+ + +
Sbjct: 1283 Q-TLWINLNVQILQEGIEGFLRALRKLPRPVRGLSVTYYLEAKMKAF-KDSIPLLLDLKN 1340
Query: 326 ----------FLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDLLN 362
++K S+F E M E +E + M +H D+LN
Sbjct: 1341 EALRDRHWKELMEKTSVFFE----MTETFTLENMFAMELHKHTDVLN 1383
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 646 NNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQ 697
N + +V ++ + E DE +AK I+ E+ RW W VE+R + E ++
Sbjct: 212 NAHVTQVTESLKQVQLERDE-YAKHIKGERARWQERMWKMSVEARTLKEEKK 262
Score = 30.0 bits (66), Expect = 8.8
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 244 KKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKN 303
KKK D PE T + +YQ L V E + + +N + LK + K
Sbjct: 47 KKKKTDSSPETTTSGGGHSPGDSQYQELAVALE-----SSSVTINQLNENIESLKQQKKQ 101
Query: 304 IVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDM 340
+ H L +A + N E+ + L+ ++I K D+
Sbjct: 102 VEHQLEEA-KKTNNEIHKAQMEQLETINILTLEKADL 137
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 646 NNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQ 697
N + +V ++ + E DE +AK I+ E+ RW W VE+R + E ++
Sbjct: 212 NAHVTQVTESLKQVQLERDE-YAKHIKGERARWQERMWKMSVEARTLKEEKK 262
Score = 30.0 bits (66), Expect = 8.8
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 244 KKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKN 303
KKK D PE T + +YQ L V E + + +N + LK + K
Sbjct: 47 KKKKTDSSPETTTSGGGHSPGDSQYQELAVALE-----SSSVTINQLNENIESLKQQKKQ 101
Query: 304 IVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDM 340
+ H L +A + N E+ + L+ ++I K D+
Sbjct: 102 VEHQLEEA-KKTNNEIHKAQMEQLETINILTLEKADL 137
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 33.1 bits (74), Expect = 1.0
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 41 MGDPMLGERKECQKIIRLKSLNA-NTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNR 99
M ++ KE QK SL A T+++ +++ E+ + + +LNE+EQL L+NR
Sbjct: 843 MNQEIVNLSKEAQKFD--SSLGALKTELSYKTQELQEKTREVQ-ERLNEMEQLKEQLENR 899
Query: 100 RDSLSGKEKKEKSSKPKDPPPFEGME--IDEVANINDMDEYIEL----LYEDIPDKVRGS 153
+L E+++ K E ++ E ++ + E +++ L DI D V +
Sbjct: 900 DSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKSDIHDTVNMN 959
Query: 154 ALILQLARNPDNLEELLLNETALGALARVLREDWKQSVELATN 196
+ RN LE L ++ + L + E+ +++ + N
Sbjct: 960 IDTQEQLRNA--LESLKQHQETINTLKSKISEEVSRNLHMEEN 1000
Score = 31.6 bits (70), Expect = 3.0
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 224 MNIIDHELKRHE--LWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRV 281
+ ++ ELK+ + + QE+ KK + L + EK +K Q L KQ+QLL V
Sbjct: 1087 LRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNV 1146
Query: 282 -----ALYLLLNLAEDTRTELKMRNKNIVHMLVKALD-----RDNFELLILVV---SFLK 328
+ +N E+ + ELK + + HM + L+ +N+E + + LK
Sbjct: 1147 QEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLK 1206
Query: 329 KLSIFMENKND 339
+L E + D
Sbjct: 1207 ELQKSFETERD 1217
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 646 NNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQ 697
N + +V ++ + E DE +AK I+ E+ RW W VE+R + E ++
Sbjct: 212 NAHVTQVTESLKQVQLERDE-YAKHIKGERARWQERMWKMSVEARTLKEEKK 262
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 646 NNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQ 697
N + +V ++ + E DE +AK I+ E+ RW W VE+R + E ++
Sbjct: 212 NAHVTQVTESLKQVQLERDE-YAKHIKGERARWQERMWKMSVEARTLKEEKK 262
>gi|193290160 CTAGE family, member 4 [Homo sapiens]
Length = 777
Score = 32.7 bits (73), Expect = 1.4
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 36/297 (12%)
Query: 58 LKSLNANTDITSLARKVVEECKLIH-PSKLNEVEQLLYYLQNRRDSLSGKE----KKEKS 112
LKS A I K+ EE + I LNE QL Q L +E K E S
Sbjct: 184 LKSQIAEAKIICKTFKMSEERRAIAIKDALNENSQL----QTSHKQLFQQEAEVWKGEVS 239
Query: 113 SKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLN 172
K FE ++ +ND + +I+ L +P +A++ + + DNLE + +
Sbjct: 240 ELNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMMKDQAAVLEEDTTDDDNLELEVNS 299
Query: 173 ETALGA-LARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHEL 231
+ GA L L+ K+ + A + S G H I ++ EL
Sbjct: 300 QWENGANLDDPLKGALKKLIHAAKLNV-------SLKSLEGERNHIIIQLSEVDKTKEEL 352
Query: 232 KRH--ELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNL 289
H L ++ S + + + + ENQ L++ + + YQ +K LY L +
Sbjct: 353 TEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMTEFYQENEMK--------LYRKLTV 404
Query: 290 AEDTRTELKMRNKNIVHMLVKA---------LDRDNFELLILVVSFLKKLSIFMENK 337
E+ R E + + + + +A L +D E L V F +K I E +
Sbjct: 405 EENYRIEEEEKLSRVEEKISRATEGLETYRKLAKDLEEELERTVHFYQKQVISYEKR 461
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 32.7 bits (73), Expect = 1.4
Identities = 75/353 (21%), Positives = 153/353 (43%), Gaps = 50/353 (14%)
Query: 19 DVHPSEKALIVHYEVEATILGEMGDPMLGERKECQ----KIIRLKSLNANTDITSLARKV 74
++ ++ L+ E + + GE+ + ERK Q K I + L A T++ + A
Sbjct: 853 ELQAKDEELLKVKEKQTKVEGELEEM---ERKHQQLLEEKNILAEQLQAETELFAEA--- 906
Query: 75 VEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPPFEGME--IDEVANI 132
EE + +K E+E++L+ L++R + + + ++ K K + +E +DE
Sbjct: 907 -EEMRARLAAKKQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLDEEEGA 965
Query: 133 NDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLNETALGALARVLREDWKQSVE 192
+ ++ E K+ L+L+ +N ++E L E + + L E+ +++
Sbjct: 966 RQKLQLEKVTAEAKIKKMEEEILLLE-DQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKN 1024
Query: 193 LATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEELSKKKKAVD-ED 251
LA I + + + ++ ++ LK+ E ++EL K K+ +D E
Sbjct: 1025 LAK------------------IRNKQ--EVMISDLEERLKKEEKTRQELEKAKRKLDGET 1064
Query: 252 PENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKNIVHMLVKA 311
+ Q + + + + + K+E+ L+ AL R + + +KN +V+
Sbjct: 1065 TDLQDQIAELQAQIDELKLQLAKKEEELQGAL---------ARGDDETLHKNNALKVVRE 1115
Query: 312 LDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDLLNIT 364
L EL S +K S NK + + D+ E+L + + E ED L+ T
Sbjct: 1116 LQAQIAELQEDFES--EKAS---RNKAEKQKRDLSEEL-EALKTELEDTLDTT 1162
>gi|163914373 solute carrier family 8 (sodium/calcium exchanger),
member 1 isoform D [Homo sapiens]
Length = 937
Score = 32.7 bits (73), Expect = 1.4
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 4 EDARYLKRKVKGG-NIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKSLN 62
E+ ++++R +KGG I +K + E E + EMG P+LGE + + II +S
Sbjct: 627 EEPKWIRRGMKGGFTITDEYDDKQPLTSKEEEERRIAEMGRPILGEHTKLEVIIE-ESYE 685
Query: 63 ANTDITSLARK 73
+ + L +K
Sbjct: 686 FKSTVDKLIKK 696
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 232 KRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAE 291
K HEL +E L K K D + E RK E+ ++ L + Q+Q + +L+L L +
Sbjct: 376 KLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQ 435
Query: 292 DTRT 295
+RT
Sbjct: 436 ISRT 439
Score = 30.0 bits (66), Expect = 8.8
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 227 IDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQL--LRVALY 284
+ HEL++ L +E L +++ D D + L E T KK L +K+E++ L L
Sbjct: 928 LTHELEKIGLNKERLLHDEQSTD-DSRYKLLESKLESTLKK--SLEIKEEKIAALEARLE 984
Query: 285 LLLNLAEDTRTELKMRNKN 303
N + R ELK KN
Sbjct: 985 ESTNYNQQLRQELKTVKKN 1003
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 232 KRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAE 291
K HEL +E L K K D + E RK E+ ++ L + Q+Q + +L+L L +
Sbjct: 376 KLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQ 435
Query: 292 DTRT 295
+RT
Sbjct: 436 ISRT 439
>gi|146262005 CTAGE family, member 6 [Homo sapiens]
Length = 777
Score = 32.3 bits (72), Expect = 1.8
Identities = 72/297 (24%), Positives = 116/297 (39%), Gaps = 36/297 (12%)
Query: 58 LKSLNANTDITSLARKVVEECKLIH-PSKLNEVEQLLYYLQNRRDSLSGKE----KKEKS 112
LKS A I K+ EE + I LNE QL Q L +E K E S
Sbjct: 184 LKSQIAEAKIICKTFKMSEERRAIAIKDALNENSQL----QTSHKQLFQQEAEVWKGEVS 239
Query: 113 SKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLN 172
K FE ++ +ND + +I+ L +P +A++ + + DNLE + +
Sbjct: 240 ELNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMMKDQAAVLEEDTTDDDNLELEVNS 299
Query: 173 ETALGA-LARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHEL 231
+ GA L L+ K+ + A + S G H I ++ EL
Sbjct: 300 QWENGANLDDPLKGALKKLIHAAKLNV-------SLKSLEGERNHIIIQLSEVDKTKEEL 352
Query: 232 KRH--ELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNL 289
H L ++ S + + + + ENQ L++ + + YQ +K LY L +
Sbjct: 353 TEHIKNLQTQQESLQSENIYFESENQKLQQKLKIMTEFYQEDEMK--------LYRKLTV 404
Query: 290 AEDTRTELKMRNKNIVHMLVKA---------LDRDNFELLILVVSFLKKLSIFMENK 337
E+ R E + + + L +A L +D E L V F +K I E +
Sbjct: 405 EENYRIEEEEKLSKVEEKLSRATEQLETYRKLAKDLEEELERTVHFYQKQVISYEKR 461
>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
Length = 1044
Score = 32.3 bits (72), Expect = 1.8
Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 277 QLLRVALYLLLNLAEDTRTELKMRNKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMEN 336
++ R L + ++ + +R + +L + L + +LI VV L++ +
Sbjct: 606 EVARCGALALWSCSKSHTNKEAIRKAGGIPLLARLLKTSHENMLIPVVGTLQECASEENY 665
Query: 337 KNDMVEMDIVEKLVKMIPCEHEDLLNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGN 396
+ + I+E LVK + E+E L + + D R+ + G L L +LL N
Sbjct: 666 RAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDKETRDLVRLHGGLKPLASLLNN 725
Query: 397 -DNYKQIAMC--VLYHISMDDRFKSMFAYTDCIPQLMKMLFECSDERIDLELISFCINLA 453
DN +++A ++ S+ + F I L+ +L + E + + ++
Sbjct: 726 TDNKERLAAVTGAIWKCSISKENVTKFREYKAIETLVGLLTD-QPEEVLVNVVGALGECC 784
Query: 454 ANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNI 490
+ N ++ + G++ L+ + LL+ + + +
Sbjct: 785 QERENRVIVRKCGGIQPLVNLLVGINQALLVNVTKAV 821
>gi|56847634 hypothetical protein LOC441294 [Homo sapiens]
Length = 777
Score = 32.3 bits (72), Expect = 1.8
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 36/297 (12%)
Query: 58 LKSLNANTDITSLARKVVEECKLIH-PSKLNEVEQLLYYLQNRRDSLSGKE----KKEKS 112
LKS A I K+ EE + I LNE QL Q L +E K + S
Sbjct: 184 LKSQIAEAKIICKTFKMSEERRAIAIKDALNENSQL----QTSHKQLFQQEAEVWKGQVS 239
Query: 113 SKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLN 172
K FE ++ +ND + +I+ L +P +A++ + + DNLE + +
Sbjct: 240 ELNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMMKDQAAVLEEDTTDDDNLELEVNS 299
Query: 173 ETALGA-LARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHEL 231
+ GA L L+ K+ + A + S G H I ++ EL
Sbjct: 300 QWENGANLDDPLKGALKKLIHAAKLNV-------SLKSLEGERNHIIIQLSEVDKTKEEL 352
Query: 232 KRH--ELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNL 289
H L ++ S + + + + ENQ L++ + + YQ +K LY L +
Sbjct: 353 TEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMTEFYQENEMK--------LYRKLTV 404
Query: 290 AEDTRTELKMRNKNIVHMLVKA---------LDRDNFELLILVVSFLKKLSIFMENK 337
E+ R E + + + L +A L +D E L V F +K I E +
Sbjct: 405 EENYRIEEEEKLSRVEEKLSRATEQLETYRKLAKDLEEELERTVHFYQKQVISYEKR 461
>gi|156713444 proteasome alpha 4 subunit isoform 2 [Homo sapiens]
Length = 190
Score = 32.0 bits (71), Expect = 2.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 56 IRLKSLNANTDITSLARKVVEECKL--------IHPSKLNEVEQLLYYLQNRRDSLSGKE 107
+ +K LN D++ L+ + VE L I K EVEQL+ ++ + +E
Sbjct: 121 LAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK-HEEEEAKAERE 179
Query: 108 KKEKSSKPKD 117
KKEK K KD
Sbjct: 180 KKEKEQKEKD 189
>gi|156713442 proteasome alpha 4 subunit isoform 1 [Homo sapiens]
Length = 261
Score = 32.0 bits (71), Expect = 2.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 56 IRLKSLNANTDITSLARKVVEECKL--------IHPSKLNEVEQLLYYLQNRRDSLSGKE 107
+ +K LN D++ L+ + VE L I K EVEQL+ ++ + +E
Sbjct: 192 LAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK-HEEEEAKAERE 250
Query: 108 KKEKSSKPKD 117
KKEK K KD
Sbjct: 251 KKEKEQKEKD 260
>gi|4506185 proteasome alpha 4 subunit isoform 1 [Homo sapiens]
Length = 261
Score = 32.0 bits (71), Expect = 2.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 56 IRLKSLNANTDITSLARKVVEECKL--------IHPSKLNEVEQLLYYLQNRRDSLSGKE 107
+ +K LN D++ L+ + VE L I K EVEQL+ ++ + +E
Sbjct: 192 LAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK-HEEEEAKAERE 250
Query: 108 KKEKSSKPKD 117
KKEK K KD
Sbjct: 251 KKEKEQKEKD 260
>gi|195972892 fatty acid amide hydrolase 2 [Homo sapiens]
Length = 532
Score = 32.0 bits (71), Expect = 2.3
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 465 GNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIEC 524
G ++ + + +K+ L + M+ + HDG F+D +GD +S E + C
Sbjct: 342 GASVQHVKLKKMKYSFQLWIAMM-SAKGHDGKEPVKFVDLLGDHGKHVS--PLWELIKWC 398
Query: 525 LGTLANLTIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIG 573
LG L+ TIP + L L E KL + K A E+ L E+V M+G
Sbjct: 399 LG-LSVYTIPSIG--LALLEEKLRYSNEKYQKFKAVEESLRKELVDMLG 444
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 31.6 bits (70), Expect = 3.0
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 41/211 (19%)
Query: 57 RLKSLNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPK 116
R+KSL A+T T A +EE L E E+ + L+ +RD ++++E + K
Sbjct: 600 RVKSLQADTTNTDTALTTLEEA-------LAEKERTIERLKEQRDRDEREKQEEIDNYKK 652
Query: 117 DPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEEL-LLNETA 175
D + D+ E + LL D+ +K A +L L + +L L ++
Sbjct: 653 D--------------LKDLKEKVSLLQGDLSEK---EASLLDLKEHASSLASSGLKKDSR 695
Query: 176 LGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHE 235
L L L + ++ +++ S + H + + I H +
Sbjct: 696 LKTLEIALEQKKEECLKME----------SQLKKAHEAALEARASPEMSDRIQHLEREIT 745
Query: 236 LWQEELSKKKKAVD------EDPENQTLRKD 260
+++E SK + VD ++ EN+ KD
Sbjct: 746 RYKDESSKAQAEVDRLLEILKEVENEKNDKD 776
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 31.6 bits (70), Expect = 3.0
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 41/211 (19%)
Query: 57 RLKSLNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPK 116
R+KSL A+T T A +EE L E E+ + L+ +RD ++++E + K
Sbjct: 572 RVKSLQADTTNTDTALTTLEEA-------LAEKERTIERLKEQRDRDEREKQEEIDNYKK 624
Query: 117 DPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEEL-LLNETA 175
D + D+ E + LL D+ +K A +L L + +L L ++
Sbjct: 625 D--------------LKDLKEKVSLLQGDLSEK---EASLLDLKEHASSLASSGLKKDSR 667
Query: 176 LGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHE 235
L L L + ++ +++ S + H + + I H +
Sbjct: 668 LKTLEIALEQKKEECLKME----------SQLKKAHEAALEARASPEMSDRIQHLEREIT 717
Query: 236 LWQEELSKKKKAVD------EDPENQTLRKD 260
+++E SK + VD ++ EN+ KD
Sbjct: 718 RYKDESSKAQAEVDRLLEILKEVENEKNDKD 748
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 31.6 bits (70), Expect = 3.0
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 225 NIIDHELKRHELWQEELSKKKKAVDEDPENQTLR--KDYEKTFKKYQGLVVKQEQLLRVA 282
+++D +LK+ + EL K+K ++ED N TL+ ++ +K L ++ +Q
Sbjct: 762 SLLDCDLKQSQQKINELLKQKDVLNEDVRNLTLKIEQETQKRCLTQNDLKMQTQQ----- 816
Query: 283 LYLLLNLAEDTRTELKMRNKNIVHMLVKALDRDNFEL 319
+N + + +LK N +++ M + L++ N EL
Sbjct: 817 ----VNTLKMSEKQLKQENNHLMEMKMN-LEKQNAEL 848
>gi|145553976 zinc finger, CW type with coiled-coil domain 2 isoform
a [Homo sapiens]
Length = 937
Score = 31.2 bits (69), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 105 GKEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPD 164
G+ +KSS + PP+ E E + + + +LY D+ +GS L +L D
Sbjct: 608 GENSHDKSSSERSTPPYLFPEYPEASKNTGQNREVSILYPGAKDQRQGSLLPEEL---ED 664
Query: 165 NLEELLLNETALGA 178
+ L+ E+ G+
Sbjct: 665 QMPRLVAEESNRGS 678
>gi|145553971 zinc finger, CW type with coiled-coil domain 2 isoform
b [Homo sapiens]
Length = 900
Score = 31.2 bits (69), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 105 GKEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPD 164
G+ +KSS + PP+ E E + + + +LY D+ +GS L +L D
Sbjct: 608 GENSHDKSSSERSTPPYLFPEYPEASKNTGQNREVSILYPGAKDQRQGSLLPEEL---ED 664
Query: 165 NLEELLLNETALGA 178
+ L+ E+ G+
Sbjct: 665 QMPRLVAEESNRGS 678
>gi|157266317 ataxia telangiectasia and Rad3 related protein [Homo
sapiens]
Length = 2644
Score = 30.8 bits (68), Expect = 5.1
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 448 FCINLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGD 507
FC NL A ++ C + LK + + F LL K I + P K FID +
Sbjct: 741 FCRNLKATSQHE---CSSSQLKASVCKPFLF---LLKKKIPS------PVKLAFIDNLHH 788
Query: 508 LAAQISNDEEEEFVIECLGTLANL-TIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVL 566
L + E+E V LGTL NL PD D + +K L+ +ED +
Sbjct: 789 LCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFS-----GNIKHILESLDSEDGFIK 843
Query: 567 EVVIM 571
E+ ++
Sbjct: 844 ELFVL 848
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,921,495
Number of Sequences: 37866
Number of extensions: 1287228
Number of successful extensions: 4654
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 4572
Number of HSP's gapped (non-prelim): 133
length of query: 792
length of database: 18,247,518
effective HSP length: 110
effective length of query: 682
effective length of database: 14,082,258
effective search space: 9604099956
effective search space used: 9604099956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.