Guide to the Human Genome
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Name: KIFAP3 Sequence: fasta or formatted (792aa) NCBI GI: 18105054
Description:

kinesin-associated protein 3

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         42           2
 C cysteine            1.8         14           1
 D aspartate           7.7         61           2
 E glutamate           9.0         71           4
 F phenylalanine       3.5         28           2
 G glycine             4.9         39           2
 H histidine           2.1         17           1
 I isoleucine          7.3         58           2
 K lysine              7.7         61           4
 L leucine            13.0        103           3
 M methionine          3.7         29           1
 N asparagine          5.1         40           2
 P proline             3.5         28           3
 Q glutamine           3.9         31           2
 R arginine            4.0         32           2
 S serine              4.5         36           2
 T threonine           2.8         22           1
 V valine              5.4         43           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.9         31           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin-associated protein 3 
ARMC2                 0.015   armadillo repeat containing 2 
CEP250                0.006   centrosomal protein 2 
ANKAR                 0.006   ankyrin and armadillo repeat containing 
SSRP1                 0.006   structure specific recognition protein 1 
CCAR1                 0.005   cell-cycle and apoptosis regulatory protein 1 
DNAH10                0.005   dynein, axonemal, heavy chain 10 
GOLGA6D               0.005   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.005   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
CENPE                 0.005   centromere protein E 
GOLGA6B               0.005   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6                0.005   golgi autoantigen, golgin subfamily a, 6 
CTAGE4                0.005   CTAGE family, member 4 
MYH10                 0.005   myosin, heavy polypeptide 10, non-muscle 
SLC8A1                0.005   solute carrier family 8 (sodium/calcium exchanger),...
CCDC88A               0.004   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.004   coiled-coil domain containing 88A isoform 1 
CTAGE6                0.004   CTAGE family, member 6 
ARMC4                 0.004   armadillo repeat containing 4 
LOC441294             0.004   hypothetical protein LOC441294 
PSMA4                 0.004   proteasome alpha 4 subunit isoform 2 
PSMA4                 0.004   proteasome alpha 4 subunit isoform 1 
PSMA4                 0.004   proteasome alpha 4 subunit isoform 1 
FAAH2                 0.004   fatty acid amide hydrolase 2 
ERC1                  0.004   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.004   RAB6-interacting protein 2 isoform delta 
ROCK2                 0.004   Rho-associated, coiled-coil containing protein kinas...
MORC4                 0.004   zinc finger, CW type with coiled-coil domain 2 isof...
MORC4                 0.004   zinc finger, CW type with coiled-coil domain 2 isof...
ATR                   0.004   ataxia telangiectasia and Rad3 related protein [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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