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Search of human proteins with 17986266
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17986266 BTG3 associated nuclear protein isoform a [Homo
sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17986266 BTG3 associated nuclear protein isoform a [Homo sapi... 944 0.0
gi|109698609 BTG3 associated nuclear protein isoform b [Homo sap... 931 0.0
gi|239751142 PREDICTED: hypothetical protein XP_002347724 [Homo ... 346 3e-95
gi|38788260 bromodomain PHD finger transcription factor isoform ... 42 0.002
gi|38570099 glutamine-rich 1 [Homo sapiens] 41 0.002
gi|38570097 glutamine-rich 1 [Homo sapiens] 41 0.002
gi|55741677 SET domain containing 1A [Homo sapiens] 40 0.006
gi|38788274 bromodomain PHD finger transcription factor isoform ... 37 0.029
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 37 0.050
gi|193794843 BEN domain containing 2 [Homo sapiens] 37 0.050
gi|224458301 family with sequence similarity 186, member A [Homo... 35 0.11
gi|221139761 zinc finger protein 853 [Homo sapiens] 35 0.11
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 35 0.11
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 35 0.11
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 35 0.19
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 35 0.19
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.19
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 33 0.43
gi|21389577 hypothetical protein LOC146705 [Homo sapiens] 33 0.56
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 33 0.73
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 33 0.73
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens] 32 1.2
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 1.2
gi|162951884 R3H domain containing 2 [Homo sapiens] 32 1.2
gi|149944526 additional sex combs like 3 [Homo sapiens] 32 1.2
gi|93141033 PAX interacting protein 1 [Homo sapiens] 32 1.6
gi|31657109 zinc finger protein 282 [Homo sapiens] 32 1.6
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 1.6
gi|4885237 forkhead box C2 [Homo sapiens] 31 2.1
gi|206725422 G protein-coupled receptor kinase interacting ArfGA... 31 2.1
>gi|17986266 BTG3 associated nuclear protein isoform a [Homo
sapiens]
Length = 469
Score = 944 bits (2439), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 60
MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI
Sbjct: 1 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 60
Query: 61 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 120
NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR
Sbjct: 61 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 120
Query: 121 CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE 180
CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE
Sbjct: 121 CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE 180
Query: 181 DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS 240
DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS
Sbjct: 181 DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS 240
Query: 241 GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK 300
GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK
Sbjct: 241 GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK 300
Query: 301 SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ 360
SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ
Sbjct: 301 SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ 360
Query: 361 VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG 420
VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG
Sbjct: 361 VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG 420
Query: 421 SPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAIQIQ 469
SPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAIQIQ
Sbjct: 421 SPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAIQIQ 469
>gi|109698609 BTG3 associated nuclear protein isoform b [Homo
sapiens]
Length = 491
Score = 931 bits (2406), Expect = 0.0
Identities = 469/491 (95%), Positives = 469/491 (95%), Gaps = 22/491 (4%)
Query: 1 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 60
MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI
Sbjct: 1 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 60
Query: 61 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 120
NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR
Sbjct: 61 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 120
Query: 121 CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE 180
CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE
Sbjct: 121 CAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE 180
Query: 181 DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS 240
DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS
Sbjct: 181 DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLS 240
Query: 241 GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK 300
GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK
Sbjct: 241 GQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVK 300
Query: 301 SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ 360
SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ
Sbjct: 301 SFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQ 360
Query: 361 VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQD----------------------GQ 398
VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQD GQ
Sbjct: 361 VIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQLLEATRIPCLLAPSVFKASSGQ 420
Query: 399 VLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPE 458
VLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPE
Sbjct: 421 VLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPE 480
Query: 459 MQLEHGAIQIQ 469
MQLEHGAIQIQ
Sbjct: 481 MQLEHGAIQIQ 491
>gi|239751142 PREDICTED: hypothetical protein XP_002347724 [Homo
sapiens]
Length = 364
Score = 346 bits (887), Expect = 3e-95
Identities = 206/350 (58%), Positives = 223/350 (63%), Gaps = 64/350 (18%)
Query: 1 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 60
MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI
Sbjct: 27 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSI 86
Query: 61 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 120
NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR
Sbjct: 87 NQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVR 146
Query: 121 CAVP-------GRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTL 173
C VP RQN IV K+ ED S + A DS+ + N +
Sbjct: 147 CVVPQTTVILNNDRQNAIVAKM--------EDPLS-NRAPDSLENVISNAVPGRRQNTIV 197
Query: 174 ITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREV 233
+ + +ED + G+ +
Sbjct: 198 VKVPGQEDSHHED--GESGS---------------------------------------- 215
Query: 234 QAVSNLSGQGKHGKKQLDP---LTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRR 290
+A ++S G+ G + + L HLFYKFGITESDWYRIKQSIDSKCRTAWRR
Sbjct: 216 EASDSVSSCGQAGSQSIGSNVTLITLNSEGHLFYKFGITESDWYRIKQSIDSKCRTAWRR 275
Query: 291 KQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTP---PPASELPQPQPQPQA 337
KQRGQSLAVKSFSRRTPNSSSYCPS P PP Q Q P A
Sbjct: 276 KQRGQSLAVKSFSRRTPNSSSYCPSAASRGHPHPLPPGPIRLQSQQWPGA 325
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 41.6 bits (96), Expect = 0.002
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 309 SSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLH 368
SSS P+E T P++ QPQPQ Q A Q + Q Q H+
Sbjct: 2386 SSSVGPAEAQPQTAQPSA---QPQPQTQPQSPAQPEV------QTQPEVQTQTTVSSHVP 2436
Query: 369 IAQVP---QGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQG 425
P Q + Q+ S+ + GQ +Q + S P+ SP Q
Sbjct: 2437 SEAQPTHAQSSKPQVAAQSQPQSNVQ--GQSPVRVQSPSQTRIRPSTPSQL----SPGQQ 2490
Query: 426 SDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAI 466
S +Q Q P+ HT+ Q QP QP++ ++H A+
Sbjct: 2491 SQVQTTTSQPIPIQPHTS-LQIPSQGQPQSQPQVVMKHNAV 2530
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 41.2 bits (95), Expect = 0.002
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 30/200 (15%)
Query: 274 YRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEP----MMSTPPPASELP 329
+R+K+ +DS Q Q A + + + Y S ++ P +
Sbjct: 25 HRMKEFLDSLASKGPEALQEFQQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSV 84
Query: 330 QPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLHIAQVPQGEQVQITQDSEGNLQ 389
QPQ Q + QQ+Q+ Q + QVQV Q Q+ + Q +E +Q
Sbjct: 85 QPQTQQE---------QQIQVQQ-PQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQ 134
Query: 390 IHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAE 449
+ V GQ Q A A + P+ S LQ + IQVQ+V Q A+
Sbjct: 135 VQ-VQIQGQAPQSA---APSIQTPSLQSPSPSQLQAAQIQVQHV------------QAAQ 178
Query: 450 ALQPTLQPEMQLEHGAIQIQ 469
+Q PE + H IQ Q
Sbjct: 179 QIQAAEIPEEHIPHQQIQAQ 198
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 41.2 bits (95), Expect = 0.002
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 30/200 (15%)
Query: 274 YRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEP----MMSTPPPASELP 329
+R+K+ +DS Q Q A + + + Y S ++ P +
Sbjct: 25 HRMKEFLDSLASKGPEALQEFQQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSV 84
Query: 330 QPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLHIAQVPQGEQVQITQDSEGNLQ 389
QPQ Q + QQ+Q+ Q + QVQV Q Q+ + Q +E +Q
Sbjct: 85 QPQTQQE---------QQIQVQQ-PQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQ 134
Query: 390 IHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAE 449
+ V GQ Q A A + P+ S LQ + IQVQ+V Q A+
Sbjct: 135 VQ-VQIQGQAPQSA---APSIQTPSLQSPSPSQLQAAQIQVQHV------------QAAQ 178
Query: 450 ALQPTLQPEMQLEHGAIQIQ 469
+Q PE + H IQ Q
Sbjct: 179 QIQAAEIPEEHIPHQQIQAQ 198
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 39.7 bits (91), Expect = 0.006
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 273 WYRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTP----PPASEL 328
W R ++ R A R + G A + R P+ +SY P EP T PPASE
Sbjct: 373 WNRYQRHTSYPPRRATREEPPGAPFAENTAERFPPSYTSYLPPEPSRPTDQDYRPPASEA 432
Query: 329 PQPQP 333
P P+P
Sbjct: 433 PPPEP 437
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 37.4 bits (85), Expect = 0.029
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 19/155 (12%)
Query: 309 SSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLH 368
SSS P+E T P++ QPQPQ Q A Q + Q Q H+
Sbjct: 2260 SSSVGPAEAQPQTAQPSA---QPQPQTQPQSPAQPEV------QTQPEVQTQTTVSSHVP 2310
Query: 369 IAQVP---QGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQG 425
P Q + Q+ S+ + GQ +Q + S P+ SP Q
Sbjct: 2311 SEAQPTHAQSSKPQVAAQSQPQSNVQ--GQSPVRVQSPSQTRIRPSTPSQL----SPGQQ 2364
Query: 426 SDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQ 460
S +Q Q P+ HT+ Q QP QP++Q
Sbjct: 2365 SQVQTTTSQPIPIQPHTS-LQIPSQGQPQSQPQVQ 2398
Score = 32.3 bits (72), Expect = 0.95
Identities = 42/156 (26%), Positives = 58/156 (37%), Gaps = 22/156 (14%)
Query: 309 SSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLH 368
+S P +P S P+ PQ QPQ Q+ L++ Q + QV V
Sbjct: 2371 TSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTL--------NQVTV------- 2415
Query: 369 IAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDI 428
P Q+QI Q + + + Q QVL Q VA +GV I
Sbjct: 2416 --SSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPI 2473
Query: 429 QVQYVQLAPVSDH---TAGAQTAEALQPTLQPEMQL 461
Q+Q Q + V H A ++Q LQ QL
Sbjct: 2474 QIQ--QSSAVQTHQIQNVVTVQAASVQEQLQRVQQL 2507
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 36.6 bits (83), Expect = 0.050
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 314 PSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGED-GQVQVIPQGHLHIAQV 372
P + + P P S PQPQ P L++ QQ QI G+ GQ +P +V
Sbjct: 68 PQQKIQIVPQPPSSQPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVP------VKV 121
Query: 373 PQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG 420
Q +Q + L + V +V A L + ASS P + G G
Sbjct: 122 VLQPQAGSSQGASSGLSVVKVLSASEV---AALSSPASSAPHSGGKTG 166
>gi|193794843 BEN domain containing 2 [Homo sapiens]
Length = 799
Score = 36.6 bits (83), Expect = 0.050
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 203 IPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRCHL 262
+P +L ++ A A L+ LF ++V SN+ G KHG LDP I +R L
Sbjct: 672 MPCSVLTLAKTKSCASLSARYLIQKLFTKDVLVQSNVYGNLKHGLCALDPNKISALREFL 731
Query: 263 FYKFGITE-----SDWYRIKQSIDSKCRT----AWRRKQRGQSL 297
+ I + DW SI+S R+ R + R QSL
Sbjct: 732 QENYPICDLSENGRDWKSCVTSINSGIRSLRHDVRRAEARSQSL 775
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/154 (25%), Positives = 53/154 (34%), Gaps = 34/154 (22%)
Query: 316 EPMMSTPPPASELPQP-------QPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLH 368
EP+ TPPP+ + P QP + +H AQ+V I + Q Q G
Sbjct: 1044 EPISITPPPSLQYSLPGALPISGQPLTKCIHLTPQQAQEVGITLTPQQAQAQ----GITL 1099
Query: 369 IAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDI 428
Q Q + +T L+I Q Q L G PL
Sbjct: 1100 TLQQAQELGIPLTPQQAQALEILFTPQQAQAL-------------------GIPLTPQQT 1140
Query: 429 QVQYVQLAPVSDHTAG----AQTAEALQPTLQPE 458
QVQ + L P D G Q A+ L L P+
Sbjct: 1141 QVQGITLTPQQDQAPGISLTTQQAQKLGIPLTPQ 1174
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 35.4 bits (80), Expect = 0.11
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 294 GQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQI 353
G S +S P + P P +S P ASE+ + Q QQ + Q
Sbjct: 44 GGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQ 103
Query: 354 GEDGQVQVIPQGHLHIAQVPQGE-QVQITQ-DSEGNLQIHH 392
+ Q+Q PQ HL + Q PQ + Q Q++Q E + +HH
Sbjct: 104 PQHEQLQQ-PQPHLELQQQPQQDGQQQLSQLQQEKHQSVHH 143
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 35.4 bits (80), Expect = 0.11
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 289 RRKQRGQSLAV---KSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQP 335
RR+QRG++ A+ RR +S P P +++PPP ELP+P P P
Sbjct: 190 RRRQRGRNPALIVRGPGPRRGGGLTSAPPGLPPLASPPPFWELPRPPPPP 239
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 35.4 bits (80), Expect = 0.11
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 294 GQSLAVKSFSRRTPNSSSYCPSEPMMSTPP---PASELPQPQPQPQALHYALANAQ 346
G L +KS R + +CP++P+ S P ASE P P P YAL A+
Sbjct: 1976 GSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASEAPYPAPPASPAPYALPVAE 2031
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 34.7 bits (78), Expect = 0.19
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 266 FGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPA 325
F +TESD + + KCR R+ +L + TP ++ PS P PPA
Sbjct: 900 FNLTESDTVKRRP----KCR---EREPLQTALLAFGVASATPGPAAPLPS-PTPGESPPA 951
Query: 326 SELPQPQP 333
S LPQP+P
Sbjct: 952 SSLPQPEP 959
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 34.7 bits (78), Expect = 0.19
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 266 FGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPA 325
F +TESD + + KCR R+ +L + TP ++ PS P PPA
Sbjct: 982 FNLTESDTVKRRP----KCR---EREPLQTALLAFGVASATPGPAAPLPS-PTPGESPPA 1033
Query: 326 SELPQPQP 333
S LPQP+P
Sbjct: 1034 SSLPQPEP 1041
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 34.7 bits (78), Expect = 0.19
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 314 PSEPMMSTPPPASELPQPQP--QPQA-----------LHYALANAQQVQIHQIGEDGQVQ 360
PS PPP E+P P P +PQ+ L A A+ QQ Q H++G Q Q
Sbjct: 346 PSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLKQLQAAAAHWQQHQQHRVG--FQYQ 403
Query: 361 VIPQGHLHIAQVPQGEQVQI-----TQDSEGNLQIHHVGQDGQVLQ 401
I Q H + Q+ Q Q I Q ++Q+ H Q Q
Sbjct: 404 GIMQKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYEMQQQQFQ 449
Score = 32.7 bits (73), Expect = 0.73
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 20/91 (21%)
Query: 314 PSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGH------L 367
PS P++ PP S +P P P P + ++ VQ Q + GH
Sbjct: 1603 PSAPVLPPPPVHSSIPPPGPVPMGMP-PMSKPPPVQ----------QTVDYGHGRDISTN 1651
Query: 368 HIAQVPQGEQVQITQD---SEGNLQIHHVGQ 395
+ Q+P GE++ + D + H GQ
Sbjct: 1652 KVEQIPYGERITLRPDPLPERSTFETEHAGQ 1682
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 33.5 bits (75), Expect = 0.43
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 17/166 (10%)
Query: 299 VKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIH-QIGEDG 357
V + + + P + S + PP S++ + Q Q H QQVQ+ Q +
Sbjct: 977 VPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQV 1036
Query: 358 QVQVIP-QGHLHIAQVPQGEQVQITQ--------DSEGNLQIHHVGQ-----DGQVLQGA 403
Q+QV P Q + + Q GE I Q + G I Q + +
Sbjct: 1037 QMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQ 1096
Query: 404 QLIAVASSDPAAAGVDG-SPLQGSDIQVQYVQLAP-VSDHTAGAQT 447
+ VAS+ A GV G +P Q + Q VQL P + G QT
Sbjct: 1097 VVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGVQT 1142
>gi|21389577 hypothetical protein LOC146705 [Homo sapiens]
Length = 525
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 295 QSLAVKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQA 337
Q L+ S R+P SS PS P+ + PP AS +P P +A
Sbjct: 392 QPLSSTPVSSRSPAPSSGMPSSPVPTPPPDASPIPAPGDPSEA 434
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.73
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 309 SSSYCPSEPMMSTPPPASELPQPQPQPQ 336
S + P P+ + PP PQPQPQPQ
Sbjct: 388 SRAMLPGSPLFTRAPPPKLQPQPQPQPQ 415
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.73
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 309 SSSYCPSEPMMSTPPPASELPQPQPQPQ 336
S + P P+ + PP PQPQPQPQ
Sbjct: 388 SRAMLPGSPLFTRAPPPKLQPQPQPQPQ 415
>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 25 VLENHVVTDEDEPALKRQRLEI--NCQDPSIKSFLYSINQTICLR--LDSIEAKLQALEA 80
V+EN + DE++ L+ +L+ + + S + + + + L L+ E + + E+
Sbjct: 129 VIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAES 188
Query: 81 TCKSLEEKLDLVTNKQHS 98
C LEE+L +VTN S
Sbjct: 189 KCGDLEEELKIVTNNLKS 206
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.0 bits (71), Expect = 1.2
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 17/100 (17%)
Query: 293 RGQSLAVKSFSRRTPNSSSYCPSE--PMMSTPPPASELPQ--------------PQPQPQ 336
+ QS + + R ++ ++CPS P +P P S P P+PQP
Sbjct: 2416 QSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPP 2475
Query: 337 ALHYALANAQQVQIHQIGEDGQVQVIPQGHLHIAQVPQGE 376
+ + + + G + P G LH A+VP G+
Sbjct: 2476 EVAFKAGSLAHTSLGAGGFPAALPAGPAGELH-AKVPSGQ 2514
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 32.0 bits (71), Expect = 1.2
Identities = 44/164 (26%), Positives = 62/164 (37%), Gaps = 20/164 (12%)
Query: 307 PNSSS-YCP-SEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQ 364
PNS+ Y P S P+ +P +LPQP QP L + N QQ G G Q Q
Sbjct: 527 PNSNQQYRPLSHPVAYSPQRGQQLPQPSQQP-GLQPMMPNQQQAAYQ--GMIGVQQPQNQ 583
Query: 365 GHLHIAQVPQGEQVQ--ITQDSEGNLQIHHVGQDGQ-----VLQGAQLIAVASSDPAAAG 417
G L + G Q+Q + Q + VG D Q Q L+ V+ S
Sbjct: 584 GLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLP 643
Query: 418 VDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAEALQPTLQPEMQL 461
G P+ Y + P + + + LQP + Q+
Sbjct: 644 AAGVPV--------YYSMIPPAQQNGTSPSVGFLQPPGSEQYQM 679
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 32.0 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 307 PNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQ 346
PN + P P PPP LP P P P L L NA+
Sbjct: 2010 PNKALVHPPPPPPPPPPPPLALPPPPPPPPPLPPPLPNAE 2049
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/140 (29%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 326 SELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLHIAQV---PQGEQVQITQ 382
S+ P PQ P QQ HQ + Q+Q PQ LH Q PQ +Q+Q Q
Sbjct: 436 SQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQ-QLQ-FPQQQLHPPQQLHRPQ-QQLQPFQ 492
Query: 383 DSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDIQ--VQYVQLAPVSD 440
Q H Q Q LQ QL + +Q +Q Q Q +
Sbjct: 493 QQHALQQQFHQLQQHQ-LQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQS 551
Query: 441 HTAG--AQTAEALQPTLQPE 458
TA +QT++ALQ + P+
Sbjct: 552 QTAPHLSQTSQALQHQVPPQ 571
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 31.6 bits (70), Expect = 1.6
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 318 MMSTPPPASELPQPQPQP 335
M+ PPPA PQPQPQP
Sbjct: 399 MVKNPPPAPPQPQPQPQP 416
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 31.6 bits (70), Expect = 1.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 280 IDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTPPP 324
+DSK R + RR + G S VK R P + S S P P P
Sbjct: 1585 VDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAP 1629
>gi|4885237 forkhead box C2 [Homo sapiens]
Length = 501
Score = 31.2 bits (69), Expect = 2.1
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 17/117 (14%)
Query: 294 GQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQI 353
GQ A+ + + + P P PPP + PQP PQP A A Q +
Sbjct: 377 GQEGALAATGHHHQHHGHHHPQAP----PPPPAPQPQPTPQPGAA------AAQAASWYL 426
Query: 354 GEDGQVQVIPQGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVAS 410
G + +P GH AQ V+ +S H +G + L +Q+ AS
Sbjct: 427 NHSGDLNHLP-GHTFAAQQQTFPNVREMFNS------HRLGIENSTLGESQVSGNAS 476
>gi|206725422 G protein-coupled receptor kinase interacting ArfGAP 2
isoform 5 [Homo sapiens]
Length = 729
Score = 31.2 bits (69), Expect = 2.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 375 GEQVQITQDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDG 420
G Q +GN +H + GQ+LQ A+L+AV +DP G
Sbjct: 156 GAQANFFHPEKGNTPLHVASKAGQILQ-AELLAVYGADPGTQDSSG 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,410,268
Number of Sequences: 37866
Number of extensions: 968901
Number of successful extensions: 5113
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 4847
Number of HSP's gapped (non-prelim): 301
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.