Guide to the Human Genome
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Name: ATP13A4 Sequence: fasta or formatted (1196aa) NCBI GI: 66932949
Description:

ATPase type 13A4

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         74           2
 C cysteine            2.7         32           1
 D aspartate           3.5         42           2
 E glutamate           6.3         75           2
 F phenylalanine       4.8         57           1
 G glycine             6.0         72           2
 H histidine           2.2         26           2
 I isoleucine          7.6         91           3
 K lysine              4.6         55           2
 L leucine            10.8        129           3
 M methionine          2.7         32           2
 N asparagine          3.3         40           1
 P proline             4.7         56           2
 Q glutamine           4.1         49           1
 R arginine            4.3         52           2
 S serine              7.8         93           3
 T threonine           6.0         72           2
 V valine              7.7         92           2
 W tryptophan          1.8         21           1
 Y tyrosine            3.0         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase type 13A4 
ATP13A5               0.581   ATPase type 13A5 
ATP13A3               0.407   ATPase type 13A3 
ATP13A2               0.312   ATPase type 13A2 isoform 1 
ATP13A2               0.311   ATPase type 13A2 isoform 2 
ATP13A2               0.289   ATPase type 13A2 isoform 3 
ATP13A1               0.105   ATPase type 13A1 
ATP2C1                0.049   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.049   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.049   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.049   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A1                0.042   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.042   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP12A                0.040   hydrogen/potassium-exchanging ATPase 12A 
ATP1A1                0.040   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.040   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                0.040   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A4                0.040   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP2A2                0.039   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.038   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP1A3                0.037   Na+/K+ -ATPase alpha 3 subunit 
ATP2C2                0.037   ATPase, Ca++ transporting, type 2C, member 2 
ATP4A                 0.036   hydrogen/potassium-exchanging ATPase 4A 
ATP1A2                0.036   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.034   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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