Guide to the Human Genome
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Name: ATP13A3 Sequence: fasta or formatted (1226aa) NCBI GI: 148839292
Description:

ATPase type 13A3

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         75           2
 C cysteine            2.6         32           2
 D aspartate           4.1         50           1
 E glutamate           6.0         73           3
 F phenylalanine       5.0         61           2
 G glycine             5.1         63           2
 H histidine           2.1         26           2
 I isoleucine          8.0         98           3
 K lysine              5.5         67           2
 L leucine             9.9        121           5
 M methionine          3.0         37           1
 N asparagine          3.9         48           2
 P proline             4.7         58           2
 Q glutamine           3.8         47           2
 R arginine            3.7         45           2
 S serine              6.9         84           2
 T threonine           5.9         72           3
 V valine              8.8        108           3
 W tryptophan          1.5         19           1
 Y tyrosine            3.4         42           4
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase type 13A3 
ATP13A4               0.397   ATPase type 13A4 
ATP13A5               0.361   ATPase type 13A5 
ATP13A2               0.336   ATPase type 13A2 isoform 2 
ATP13A2               0.335   ATPase type 13A2 isoform 1 
ATP13A2               0.313   ATPase type 13A2 isoform 3 
ATP13A1               0.107   ATPase type 13A1 
ATP1A4                0.042   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP1A1                0.038   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.038   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                0.038   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP12A                0.037   hydrogen/potassium-exchanging ATPase 12A 
ATP1A2                0.036   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP2A2                0.035   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.035   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2C2                0.033   ATPase, Ca++ transporting, type 2C, member 2 
ATP1A3                0.033   Na+/K+ -ATPase alpha 3 subunit 
ATP2C1                0.032   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.032   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.032   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.032   calcium-transporting ATPase 2C1 isoform 1a 
ATP4A                 0.029   hydrogen/potassium-exchanging ATPase 4A 
ATP2A2                0.027   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP8A1                0.026   ATPase, aminophospholipid transporter (APLT), class...
ATP9A                 0.025   ATPase, class II, type 9A 
ATP10D                0.024   ATPase, class V, type 10D 
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.024   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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