BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|17402931 sperm associated antigen 11B isoform C preproprotein [Homo sapiens] (113 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|17402931 sperm associated antigen 11B isoform C preproprotein... 237 2e-63 gi|126131097 sperm associated antigen 11B isoform D preproprotei... 155 9e-39 gi|126032340 sperm associated antigen 11A [Homo sapiens] 149 6e-37 gi|126091042 sperm associated antigen 11B isoform G preproprotei... 147 2e-36 gi|7706551 sperm associated antigen 11B isoform A preproprotein ... 144 2e-35 gi|17402929 sperm associated antigen 11B isoform H preproprotein... 144 2e-35 gi|83582794 beta-defensin 110 [Homo sapiens] 35 0.013 gi|82734214 beta-defensin 111 [Homo sapiens] 32 0.11 gi|239749357 PREDICTED: hypothetical protein XP_002347009 [Homo ... 31 0.19 gi|239753808 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54 gi|239748372 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54 gi|169166494 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54 gi|50344744 beta-defensin 108B [Homo sapiens] 29 0.70 gi|82734223 beta-defensin 124 [Homo sapiens] 29 0.92 gi|148806902 TBC1 domain family, member 12 [Homo sapiens] 28 1.2 gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho... 28 1.2 gi|82734217 beta-defensin 112 [Homo sapiens] 28 1.6 gi|18250304 beta defensin 129 precursor [Homo sapiens] 28 1.6 gi|31652242 transcription factor 20 isoform 2 [Homo sapiens] 28 2.0 gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] 28 2.0 gi|54112432 erv1-like growth factor [Homo sapiens] 28 2.0 gi|4502623 cyclin H [Homo sapiens] 27 3.5 gi|156938343 talin 2 [Homo sapiens] 27 3.5 gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] 27 3.5 gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] 27 3.5 gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 27 3.5 gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 27 3.5 gi|82734219 beta-defensin 114 [Homo sapiens] 27 3.5 gi|25121980 dispatched B [Homo sapiens] 27 4.6 gi|38176300 nestin [Homo sapiens] 26 6.0 >gi|17402931 sperm associated antigen 11B isoform C preproprotein [Homo sapiens] Length = 113 Score = 237 bits (604), Expect = 2e-63 Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQEPASDLKVVDCRRSEGFCQEYCNYMETQVGYCSKKKDACCLH 113 DLLPPRTPPYQEPASDLKVVDCRRSEGFCQEYCNYMETQVGYCSKKKDACCLH Sbjct: 61 DLLPPRTPPYQEPASDLKVVDCRRSEGFCQEYCNYMETQVGYCSKKKDACCLH 113 >gi|126131097 sperm associated antigen 11B isoform D preproprotein [Homo sapiens] Length = 133 Score = 155 bits (391), Expect = 9e-39 Identities = 80/114 (70%), Positives = 90/114 (78%), Gaps = 2/114 (1%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQ-EPASDLKVVDCRRSEGFCQ-EYCNYMETQVGYCSKKKDACCL 112 DLLPPRTPPYQ + ++ C +G C+ +C+ E + CS + CC+ Sbjct: 61 DLLPPRTPPYQGDVPPGIRNTICHMQQGICRLFFCHSGEKKRDICSDPWNRCCV 114 >gi|126032340 sperm associated antigen 11A [Homo sapiens] Length = 108 Score = 149 bits (375), Expect = 6e-37 Identities = 75/91 (82%), Positives = 80/91 (87%), Gaps = 1/91 (1%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQ-EPASDLKVVDCRRSEGFCQ 90 DLLPPRTPPYQ + ++ CR +G C+ Sbjct: 61 DLLPPRTPPYQGDVPLGIRNTICRMQQGICR 91 >gi|126091042 sperm associated antigen 11B isoform G preproprotein [Homo sapiens] Length = 108 Score = 147 bits (371), Expect = 2e-36 Identities = 74/91 (81%), Positives = 79/91 (86%), Gaps = 1/91 (1%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQ-EPASDLKVVDCRRSEGFCQ 90 DLLPPRTPPYQ + ++ C +G C+ Sbjct: 61 DLLPPRTPPYQGDVPPGIRNTICHMQQGICR 91 >gi|7706551 sperm associated antigen 11B isoform A preproprotein [Homo sapiens] Length = 103 Score = 144 bits (362), Expect = 2e-35 Identities = 71/71 (100%), Positives = 71/71 (100%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQ 71 DLLPPRTPPYQ Sbjct: 61 DLLPPRTPPYQ 71 >gi|17402929 sperm associated antigen 11B isoform H preproprotein [Homo sapiens] Length = 82 Score = 144 bits (362), Expect = 2e-35 Identities = 71/71 (100%), Positives = 71/71 (100%) Query: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR Sbjct: 1 MRQRLLPSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKR 60 Query: 61 DLLPPRTPPYQ 71 DLLPPRTPPYQ Sbjct: 61 DLLPPRTPPYQ 71 >gi|83582794 beta-defensin 110 [Homo sapiens] Length = 62 Score = 35.0 bits (79), Expect = 0.013 Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C + G C+ +C+ +E GYC K + CC+ Sbjct: 32 CEKVRGICKTFCDDVEYDYGYCIKWRSQCCV 62 >gi|82734214 beta-defensin 111 [Homo sapiens] Length = 67 Score = 32.0 bits (71), Expect = 0.11 Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 81 DCRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 +CR G C+ C+ E ++ YC + CCL Sbjct: 34 ECRIGNGQCKNQCHENEIRIAYCIRPGTHCCL 65 >gi|239749357 PREDICTED: hypothetical protein XP_002347009 [Homo sapiens] Length = 111 Score = 31.2 bits (69), Expect = 0.19 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C R G CQ++C E VG C + CCL Sbjct: 66 CERPNGSCQDFCLETEIHVGRCLNSR-PCCL 95 >gi|239753808 PREDICTED: hypothetical protein [Homo sapiens] Length = 83 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C R G C+++C E VG C + CCL Sbjct: 38 CERPNGSCRDFCLETEIHVGRCLNSR-PCCL 67 >gi|239748372 PREDICTED: hypothetical protein [Homo sapiens] Length = 83 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C R G C+++C E VG C + CCL Sbjct: 38 CERPNGSCRDFCLETEIHVGRCLNSR-PCCL 67 >gi|169166494 PREDICTED: hypothetical protein [Homo sapiens] Length = 73 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C R G C+++C E VG C + CCL Sbjct: 28 CERPNGSCRDFCLETEIHVGRCLNSR-PCCL 57 >gi|50344744 beta-defensin 108B [Homo sapiens] Length = 73 Score = 29.3 bits (64), Expect = 0.70 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C R G C+++C E VG C + CCL Sbjct: 28 CERPNGSCRDFCLETEIHVGRCLNSQ-PCCL 57 >gi|82734223 beta-defensin 124 [Homo sapiens] Length = 71 Score = 28.9 bits (63), Expect = 0.92 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C + +G CQ YC ET + C CCL Sbjct: 27 CWKGQGACQTYCTRQETYMHLC-PDASLCCL 56 >gi|148806902 TBC1 domain family, member 12 [Homo sapiens] Length = 775 Score = 28.5 bits (62), Expect = 1.2 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 20 PGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKRDLLPPRTPPYQEPASDL-- 77 P ++ A N A LG + T FQ+ R RD LPP PP PA++ Sbjct: 248 PPATSAERTNGGAEPRLGFSDIHFNSRNT--FQVSRGQSARDHLPPAGPPVPLPAAEQGP 305 Query: 78 --KVVDCRRSEGF 88 RRS GF Sbjct: 306 AGASARARRSGGF 318 >gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo sapiens] Length = 1484 Score = 28.5 bits (62), Expect = 1.2 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Query: 20 PGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKRDLLPPRTPPYQ 71 P +S+A+ + E L L E+ PG GT+ V LP TPP Q Sbjct: 961 PENSEAQEPENDQAEPLPGLEEKPPGVGTS------EGVYLTQLPHPTPPLQ 1006 >gi|82734217 beta-defensin 112 [Homo sapiens] Length = 113 Score = 28.1 bits (61), Expect = 1.6 Identities = 9/31 (29%), Positives = 16/31 (51%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 C G C+ C+ E ++ YC++ CC+ Sbjct: 54 CTAIGGRCKNQCDDSEFRISYCARPTTHCCV 84 >gi|18250304 beta defensin 129 precursor [Homo sapiens] Length = 183 Score = 28.1 bits (61), Expect = 1.6 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 70 YQEPASDLKVVDCRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112 YQ + + C G C+++CN E ++ C KK CC+ Sbjct: 15 YQVNTEFIGLRRCLMGLGRCRDHCNVDEKEIQKCKMKK--CCV 55 >gi|31652242 transcription factor 20 isoform 2 [Homo sapiens] Length = 1938 Score = 27.7 bits (60), Expect = 2.0 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Query: 2 RQRLLPSVTSLLLVALLFPG-SSQARHVNHSATEALGELRERAPG---------QGTNGF 51 R R+L + L + P +S A E + E R PG Q N Sbjct: 408 RNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGLEGVPEKRLTDPGLSSLSALSTQVANLP 467 Query: 52 QLLRHAVKRDLLPPRTPPYQEPASDLKVVDCRRSEGFCQ 90 ++H + D L P+ + P+S K C SEG Q Sbjct: 468 NTVQHMLLSDALTPQKKTSKRPSSSKKADSCTNSEGSSQ 506 >gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] Length = 1960 Score = 27.7 bits (60), Expect = 2.0 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Query: 2 RQRLLPSVTSLLLVALLFPG-SSQARHVNHSATEALGELRERAPG---------QGTNGF 51 R R+L + L + P +S A E + E R PG Q N Sbjct: 408 RNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGLEGVPEKRLTDPGLSSLSALSTQVANLP 467 Query: 52 QLLRHAVKRDLLPPRTPPYQEPASDLKVVDCRRSEGFCQ 90 ++H + D L P+ + P+S K C SEG Q Sbjct: 468 NTVQHMLLSDALTPQKKTSKRPSSSKKADSCTNSEGSSQ 506 >gi|54112432 erv1-like growth factor [Homo sapiens] Length = 205 Score = 27.7 bits (60), Expect = 2.0 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 20/94 (21%) Query: 20 PGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKRDLLPPRTPPYQEPASDLKV 79 PG +++ ++ AT+A G R A +RD + P Q P SD V Sbjct: 19 PGGARSEMMDDLATDARG-----------------RGAGRRDAAASASTPAQAPTSDSPV 61 Query: 80 VD---CRRSEGFCQEYCNYMETQVGYCSKKKDAC 110 + RR C ++ +M TQ +K ++ C Sbjct: 62 AEDASRRRPCRACVDFKTWMRTQQKRDTKFREDC 95 >gi|4502623 cyclin H [Homo sapiens] Length = 323 Score = 26.9 bits (58), Expect = 3.5 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Query: 18 LFPGSSQARHVNHSATEALGELRERAPGQGTNGFQLLRHAVKRDLLPPRTPPYQEPASDL 77 ++ SSQ RH S+ E L LR A + AV + P P + EP ++ Sbjct: 1 MYHNSSQKRHWTFSSEEQLARLRADA------NRKFRCKAVANGKVLPNDPVFLEPHEEM 54 Query: 78 KVVDCRRSEGFCQEYCN 94 + C+ E E+C+ Sbjct: 55 TL--CKYYEKRLLEFCS 69 >gi|156938343 talin 2 [Homo sapiens] Length = 2542 Score = 26.9 bits (58), Expect = 3.5 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 19/87 (21%) Query: 16 ALLFPGSSQ--------ARHVNHSATEALGELRERAPGQGTNGFQL--LRHAVKR---DL 62 AL+ PG ++ A+ V+HS + L PGQ L + + K+ D Sbjct: 1174 ALIAPGDAERQQRLAQVAKAVSHSLNNCVNCL----PGQKDVDVALKSIGESSKKLLVDS 1229 Query: 63 LPPRTPPYQEPASDLK--VVDCRRSEG 87 LPP T P+QE S+L D +S G Sbjct: 1230 LPPSTKPFQEAQSELNQAAADLNQSAG 1256 >gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] Length = 1031 Score = 26.9 bits (58), Expect = 3.5 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 24/82 (29%) Query: 7 PSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQG-------------TNGFQL 53 PSV+SLLL FP V+H + E ++PG T G + Sbjct: 231 PSVSSLLLHLRPFP-------VDHKGVLSGAEAPTQSPGTSPLEVLPGYETHLETTGHKK 283 Query: 54 LRHAVKRDLLPPRTPPYQEPAS 75 + A + PP PP Q PAS Sbjct: 284 MPQAFE----PPMPPPCQSPAS 301 >gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] Length = 1006 Score = 26.9 bits (58), Expect = 3.5 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 24/82 (29%) Query: 7 PSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQG-------------TNGFQL 53 PSV+SLLL FP V+H + E ++PG T G + Sbjct: 206 PSVSSLLLHLRPFP-------VDHKGVLSGAEAPTQSPGTSPLEVLPGYETHLETTGHKK 258 Query: 54 LRHAVKRDLLPPRTPPYQEPAS 75 + A + PP PP Q PAS Sbjct: 259 MPQAFE----PPMPPPCQSPAS 276 >gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] Length = 1044 Score = 26.9 bits (58), Expect = 3.5 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 24/82 (29%) Query: 7 PSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQG-------------TNGFQL 53 PSV+SLLL FP V+H + E ++PG T G + Sbjct: 244 PSVSSLLLHLRPFP-------VDHKGVLSGAEAPTQSPGTSPLEVLPGYETHLETTGHKK 296 Query: 54 LRHAVKRDLLPPRTPPYQEPAS 75 + A + PP PP Q PAS Sbjct: 297 MPQAFE----PPMPPPCQSPAS 314 >gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] Length = 1079 Score = 26.9 bits (58), Expect = 3.5 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 24/82 (29%) Query: 7 PSVTSLLLVALLFPGSSQARHVNHSATEALGELRERAPGQG-------------TNGFQL 53 PSV+SLLL FP V+H + E ++PG T G + Sbjct: 279 PSVSSLLLHLRPFP-------VDHKGVLSGAEAPTQSPGTSPLEVLPGYETHLETTGHKK 331 Query: 54 LRHAVKRDLLPPRTPPYQEPAS 75 + A + PP PP Q PAS Sbjct: 332 MPQAFE----PPMPPPCQSPAS 349 >gi|82734219 beta-defensin 114 [Homo sapiens] Length = 69 Score = 26.9 bits (58), Expect = 3.5 Identities = 10/30 (33%), Positives = 14/30 (46%) Query: 82 CRRSEGFCQEYCNYMETQVGYCSKKKDACC 111 C + G C+ C E Q+ CS + CC Sbjct: 29 CTKRYGRCKRDCLESEKQIDICSLPRKICC 58 >gi|25121980 dispatched B [Homo sapiens] Length = 1401 Score = 26.6 bits (57), Expect = 4.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Query: 51 FQLLRHAVKRDLLPPRTPPYQEPA 74 +QLL + RD L P+T YQ P+ Sbjct: 409 YQLLHFLLDRDFLSPQTTDYQVPS 432 >gi|38176300 nestin [Homo sapiens] Length = 1621 Score = 26.2 bits (56), Expect = 6.0 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 6 LPSVTSLLLVALLFPGSSQAR-HVNHSATEALGELR---ERAPGQGTNGFQLLRHAVKRD 61 LP L+ + PG QA V + A+GE E PGQG G H + + Sbjct: 1059 LPEAIEPLVEDDVAPGGDQASPEVMLGSEPAMGESAAGAEPGPGQGVGGLGDPGHLTREE 1118 Query: 62 LLPPRTPPYQEPASDLKVV 80 ++ PP +E + + K V Sbjct: 1119 VM---EPPLEEESLEAKRV 1134 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,205,834 Number of Sequences: 37866 Number of extensions: 243218 Number of successful extensions: 642 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 618 Number of HSP's gapped (non-prelim): 40 length of query: 113 length of database: 18,247,518 effective HSP length: 83 effective length of query: 30 effective length of database: 15,104,640 effective search space: 453139200 effective search space used: 453139200 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.