Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SPAG11A Sequence: fasta or formatted (108aa) NCBI GI: 126032340
Description:

sperm associated antigen 11A

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          6           1
 C cysteine            3.7          4           1
 D aspartate           1.9          2           1
 E glutamate           2.8          3           1
 F phenylalanine       3.7          4           2
 G glycine            10.2         11           1
 H histidine           4.6          5           1
 I isoleucine          2.8          3           1
 K lysine              0.9          1           1
 L leucine            13.9         15           3
 M methionine          1.9          2           1
 N asparagine          2.8          3           1
 P proline             7.4          8           2
 Q glutamine           9.3         10           2
 R arginine           12.0         13           1
 S serine              5.6          6           2
 T threonine           5.6          6           1
 V valine              4.6          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 11A 
SPAG11B               0.980   sperm associated antigen 11B isoform G preproprotei...
SPAG11B               0.865   sperm associated antigen 11B isoform D preproprotei...
SPAG11B               0.645   sperm associated antigen 11B isoform H preproprotein...
SPAG11B               0.620   sperm associated antigen 11B isoform C preproprotein...
SPAG11B               0.595   sperm associated antigen 11B isoform A preproprotein ...
SPAG11B               0.170   sperm associated antigen 11B isoform E precursor [H...
CECR2                 0.025   cat eye syndrome chromosome region, candidate 2 [Ho...
ADAMTS1               0.005   ADAM metallopeptidase with thrombospondin type 1 mot...
USP31                 0.005   ubiquitin specific peptidase 31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press