Guide to the Human Genome
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Name: GFER Sequence: fasta or formatted (205aa) NCBI GI: 54112432
Description:

erv1-like growth factor

Referenced in:

Liver
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         21           3
 C cysteine            4.9         10           1
 D aspartate           9.8         20           2
 E glutamate           5.9         12           2
 F phenylalanine       4.9         10           2
 G glycine             6.3         13           2
 H histidine           3.4          7           1
 I isoleucine          0.5          1           1
 K lysine              4.4          9           1
 L leucine             6.3         13           1
 M methionine          2.4          5           2
 N asparagine          2.0          4           1
 P proline             6.8         14           2
 Q glutamine           3.9          8           3
 R arginine           11.7         24           3
 S serine              4.9         10           1
 T threonine           5.4         11           1
 V valine              2.4          5           1
 W tryptophan          2.4          5           1
 Y tyrosine            1.5          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erv1-like growth factor 
QSOX2                 0.021   quiescin Q6 sulfhydryl oxidase 2 
MXI1                  0.017   MAX interactor 1 isoform b 
HES4                  0.017   hairy and enhancer of split 4 isoform 1 
HES4                  0.017   hairy and enhancer of split 4 isoform 2 
ZNF687                0.014   zinc finger protein 687 
ZNF224                0.014   zinc finger protein 224 
CARD14                0.014   caspase recruitment domain protein 14 isoform 1 [Hom...
CARD14                0.014   caspase recruitment domain protein 14 isoform 2 [Hom...
ZNF329                0.012   zinc finger protein 329 
ZNF425                0.012   zinc finger protein 425 
SPTA1                 0.012   spectrin, alpha, erythrocytic 1 
ZNF92                 0.010   zinc finger protein 92 isoform 1 
ZNF92                 0.010   zinc finger protein 92 isoform 2 
TNRC18                0.010   trinucleotide repeat containing 18 
PCLO                  0.010   piccolo isoform 2 
PCLO                  0.010   piccolo isoform 1 
ZFP14                 0.010   zinc finger protein 14-like 
ASXL3                 0.010   additional sex combs like 3 
LOC100292234          0.007   PREDICTED: hypothetical protein 
LOC100290708          0.007   PREDICTED: hypothetical protein XP_002346660 
LOC100288955          0.007   PREDICTED: hypothetical protein XP_002342507 
DCST2                 0.007   DC-STAMP domain containing 2 
ZNF785                0.007   zinc finger protein 785 
LYL1                  0.007   lymphoblastic leukemia derived sequence 1 
DACT2                 0.007   dapper, antagonist of beta-catenin, homolog 2 [Homo...
ZNF354C               0.007   zinc finger protein 354C 
ZNF234                0.007   zinc finger protein 234 
ZNF234                0.007   zinc finger protein 234 
BRAF                  0.007   B-Raf 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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